Carg21104 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21104
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	tubulin-folding cofactor B
Location	Carg_Chr07: 8156419 .. 8160058 (-)
RNA-Seq Expression	Carg21104
Synteny	Carg21104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTTAGTTATTCATGAGAGTGTGGAAGTGAAACAGAGGTGAAGAAGTGTAAGAAGAACAAATCTATGGCGTCTCGATTGCAGCAGATCGAAACGGATGAATCTGTACTCTTGCGAGTAACCCATGCCAATCTCAAGTCCTTCACTTCCGATGTTCGCTTTTCCCTTCAGGTTTGTTCCTTTTCCAAAGATCAAGCGTTTTTGTAGCTTTCGTTGCATCGATTAAAGATTACCTATTGTGGATTTTGTCTAAAATTATTAATTGTAGATGAGCGTGGAATCTGTAAAGGAAAAGTTGTGGAAAAAGTGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGATTCCGGTGCTAAAATTTCCGATTTGACGGATAATTCCATTCCCTTGGGGTTCTATTCTCCTTTAGATGGGTACCTCTTCTTCTTTCATTGAATTCTTTACATTGTTTCGTTTTTCACTTTGAAATTCTGCTCAATAAATGGTTTATAACGGTGTGCATTGTTTCTTTGCTAAGGTACCGGCTACATATTATTGATCTCGACCCCTCATCAGTTACGTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAAATCTCTGAAGAAGCCTATGAAAAACGTGATGGTTAGTATTTTTGCAGAGCTTGTATGTAGTTCATTCAATTGCTTATCAAATAGGCTGCACTGAAGGACCCTCTAAACTCCCAATGGGCCATTGTGGGTCACAGTGAGGACTTAGAGCCAACTGTTATAATATCGATAGGTTTAGGTGTTGGGTCTCTGCAGTTGACAACCATTTTCAAACTTCGTCTTGAACCTGCATTTCTTAATCCTTGAAGTATGCTGCTACTTAAAAAGCTTTTTGGATTTAAAAGTTGTGCACCACTTTCTTAATACTGCAAGAAAAAAAAAAAGCTTTGTGCTAATGAGTAGCGGTTTCATGAGAACTCTGGTGGAGTAGGAGAGTTTTCTTTGGGTAATAGTTTCCTATGGATCGACTCTGGATCCAATTGTTTCTCATGTTTTAGTGGCTTAGATTTAATCATCTAATTACCTTCGTATCTACTTTCTTTCCTCTATAAGAAATTCGAGATATTTTTTCGTCGCTCTTCTGGTTTATCGGCCTATTGTGTATTTCATTTATTTCAATGGAATAATTCTTTATGGAAAAAGGTATTGTGCGTAACTGACCTTCTTCTGGATTTTTTTTTTCAGATACATTCCGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCATCAGCTTTTGAAAGTAAAGTAAGCCTCATATATTTTACTTTTGTACTTAACAATATCATTAGAGATTTTATTCATTAGCGTGAACTGTGATTAATGATATAGGAGGCACTTTAATTCATGGCCGTTAAGTAGAGTTTTGTAACTGGAATCTATTAGAAATTTGTTAGTTAGTGTGAACTGTGAATGATGATGTAGAGGCTGCCTAGTAATTTCGTTCACGTCAGTTAAGTGGGGTTGTGAAACTGACATCTCTTAGTATTCTTGAAATCCTGGTTTTGCCCCGCATCCCTTTTATAGACACGTTTCTATCTCTATCCTCGTAATTTTTGGTCTTTATTTACTGACTAGCCTCATATTTTCAGATATCTGATAACTACATGGAAGAACTCTGTGCAAATATAAAGGTTAGTTACCTTACCTGCTTTAGATTTGTATGATGGATGTGATCTTAAAAACCTATGGAAATTCTTATCTTAAAGAGTTGAGCTGTCATACTAATTCATGAAAGAAATGAATTATTTAGAATGAAATTCTGTGGATGAGACTGAATGTTAACATATGATTTTCCATCTTTCCCGGTACCCGTTGACTTGGATCTGCAATTCATCTCCAAGATTCCATGAAGATGAACAAATCCATGGTTTAAGCACCCTTATTTTGGCTGGATAGAATGCTTAATGGTAGACCTTGCTGAACATAATGATATCTTTGTGAACAACACAAAGGAGACATGCTAGTGAATTCCTGCTTCTCGTATTTATTCATATTTGAATCACGACAGCTTACTTGATGTGGTCTTCTTATAGTTAGCATTCGCTCTTGTGGCTTGAAATTCTTTTATGGGTGAAGTATTTACCATCTGCACCTTCAATCCCGGTTTGCTACAGTTTGTACTTAGATTTTACATATTATAGGTAGGTGATAGATGTGAAGTTGAGCCAGGGAAGATGAGGGGCAGTGTAAAATTTGTTGGCCGGGCCGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAGCCATTGGGAAAAAATGATGGCAAGTAAGAATCCTTTGTTCTCTTCTGCATGTGATTGATTTGTTTTTCCTAATACCTCTTTTCATTATTCATTGTTAGAAACTTCAACACTTTGATAGTCACAATTTTTTTTTTTTTTTTTATTATTATTTATTTATTTATAAGAGACAATTTCATTGATGATTGAAATTTATAAAAAGGATGTATAATCCATGGTGTTTGTGTTTGCAAAAGACCTTCCCAATTGGCAATGAGGGAGGTATCTATAGGAAGTAAAAATATTAGACAATTTACACCAAGATATAGTTTGATAAACAACATTGTCGAAAAGTTTTGTGTAGGCCTGTGTCGTTAAAGCAAATATTCTCTGATTTCTTTCTTTCCACATATTCCAAAAGAAAGCCATAATGAAGTTTTTCCATAATAGGGCTTTTGCATTCTTGAAAATGTGCTTGAAAAAATTTTACCCTTCCTTTTTAAGGGAGAAAAAGTACTACGAACATTGAAACACATATCTTAGGATGGTCCGCTTAATTTGGATGAGTTGTTTCATATGGCCGTTCTGTTACCGAACAGTTTTCGTTCTCTATGCTCGTTCTTAAATTCTGTAAGATTTAGTGTTTCATATAAAAATTCTACTTCTTGTGTTATAGTTTGATAAAATTATCACTCACTTGTGTTGATTGATTAAAATTCTGATAGCTGTTAGAATCCAGCTTTTTATCACTCACTTCAGAGATTTTATCACATATTCTGTATGATGCTAAATTAGTAAATTCGTCAGGGTAAAAGGGATCCGCTATTTTGACTGCCCTCCTCTTCATGGTGCAATGGTTAGGCCCGACAAAGTGAAGGTTTGATTTTCAGCTCCATTAATCTGTTTTCCAACTTCTGAACTGCAAATAGTATGTTACATAGCAATCTTTTAATTCTGAACTTTTGTAATGTCCCATGCTTTAAAATTTTGAAGCAATCTACTGCTTAAGGACCAATGGATTTATTCAGTTTATGGGAAATTAGGAAGGTGAACCATTTCCCCCAAATGTAACAGCTTGCGTACACCTAACCCCTTCGTGCATCGTTGTAGGCTTGAGACATAGGCATCGCCAATTTGACATTCTTTGATCGTGCCCATTGCTTAATTCAATTCATATTAACATTTATAATCTGTGAATCGAGTTGGAAAGTCTTAAGCCTGTGAATTTTTTTGAGTATCAAATTTATGAAGCCTTTATGAATTATTGATTTCTTTTAGAAGTAATTTAAAGACAATCTCAGCCTCATGGTGGGTTGAAATGGTTTTACAATTTTTTCTTGAAAGAAGCCCCTTTTTTTTTC

mRNA sequence

CAAATTTAGTTATTCATGAGAGTGTGGAAGTGAAACAGAGGTGAAGAAGTGTAAGAAGAACAAATCTATGGCGTCTCGATTGCAGCAGATCGAAACGGATGAATCTGTACTCTTGCGAGTAACCCATGCCAATCTCAAGTCCTTCACTTCCGATGTTCGCTTTTCCCTTCAGATGAGCGTGGAATCTGTAAAGGAAAAGTTGTGGAAAAAGTGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGATTCCGGTGCTAAAATTTCCGATTTGACGGATAATTCCATTCCCTTGGGGTTCTATTCTCCTTTAGATGGGTACCGGCTACATATTATTGATCTCGACCCCTCATCAGTTACGTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAAATCTCTGAAGAAGCCTATGAAAAACGTGATGATACATTCCGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCATCAGCTTTTGAAAGTAAAATATCTGATAACTACATGGAAGAACTCTGTGCAAATATAAAGGTAGGTGATAGATGTGAAGTTGAGCCAGGGAAGATGAGGGGCAGTGTAAAATTTGTTGGCCGGGCCGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAGCCATTGGGAAAAAATGATGGCAAGGTAAAAGGGATCCGCTATTTTGACTGCCCTCCTCTTCATGGTGCAATGGTTAGGCCCGACAAAGTGAAGGATCGTGCCCATTGCTTAATTCAATTCATATTAACATTTATAATCTGTGAATCGAGTTGGAAAGTCTTAAGCCTGTGAATTTTTTTGAGTATCAAATTTATGAAGCCTTTATGAATTATTGATTTCTTTTAGAAGTAATTTAAAGACAATCTCAGCCTCATGGTGGGTTGAAATGGTTTTACAATTTTTTCTTGAAAGAAGCCCCTTTTTTTTTC

Coding sequence (CDS)

ATGGCGTCTCGATTGCAGCAGATCGAAACGGATGAATCTGTACTCTTGCGAGTAACCCATGCCAATCTCAAGTCCTTCACTTCCGATGTTCGCTTTTCCCTTCAGATGAGCGTGGAATCTGTAAAGGAAAAGTTGTGGAAAAAGTGTGGTACTTCTGTAAACTCCATGTGCCTTGAACTCTATGATGATTCCGGTGCTAAAATTTCCGATTTGACGGATAATTCCATTCCCTTGGGGTTCTATTCTCCTTTAGATGGGTACCGGCTACATATTATTGATCTCGACCCCTCATCAGTTACGTCTGGTGGTTGGCTTGAAGATACCTCACTAGTGGAGAAGTACCAAATCTCTGAAGAAGCCTATGAAAAACGTGATGATACATTCCGAAAATTTAAAGAAAAATTGGCATCCCAGAATCCATCAGCTTTTGAAAGTAAAATATCTGATAACTACATGGAAGAACTCTGTGCAAATATAAAGGTAGGTGATAGATGTGAAGTTGAGCCAGGGAAGATGAGGGGCAGTGTAAAATTTGTTGGCCGGGCCGAATCGCTTGCTCCTGGTTTTTGGGTTGGAGTTCAATATGATGAGCCATTGGGAAAAAATGATGGCAAGGTAAAAGGGATCCGCTATTTTGACTGCCCTCCTCTTCATGGTGCAATGGTTAGGCCCGACAAAGTGAAGGATCGTGCCCATTGCTTAATTCAATTCATATTAACATTTATAATCTGTGAATCGAGTTGGAAAGTCTTAAGCCTGTGA

Protein sequence

MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEAYEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVGRAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVKDRAHCLIQFILTFIICESSWKVLSL

Homology

[Close]

BLAST of Carg21104 vs. NCBI nr
Match: KAG7027664.1 (Tubulin-folding cofactor B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 515.0 bits (1325), Expect = 3.7e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVKDRAHCLIQFILT 240
           RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVKDRAHCLIQFILT
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVKDRAHCLIQFILT 240

Query: 241 FIICESSWKVLSL 254
           FIICESSWKVLSL
Sbjct: 241 FIICESSWKVLSL 253

[Close]

BLAST of Carg21104 vs. NCBI nr
Match: KAG6595702.1 (Tubulin-folding cofactor B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464.5 bits (1194), Expect = 5.7e-127
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. NCBI nr
Match: XP_022925171.1 (tubulin-folding cofactor B [Cucurbita moschata])

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-125
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGK+RGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFD PPLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDSPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. NCBI nr
Match: XP_023517149.1 (tubulin-folding cofactor B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 458.4 bits (1178), Expect = 4.1e-125
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKV DRCEVEPGK+RGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVADRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDG VKGIRYFDCPPLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. NCBI nr
Match: XP_022966444.1 (tubulin-folding cofactor B [Cucurbita maxima])

HSP 1 Score: 457.6 bits (1176), Expect = 7.0e-125
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGK+RGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
            AESLAPGFWVGVQYDEPLGKNDG VKGIRYFDCPPLHGAMVRPDKVK
Sbjct: 181 WAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy Swiss-Prot
Match: Q67Z52 (Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.2e-98
Identity = 171/228 (75.00%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MA+   Q+E D+SV L +THANLKSF++D RFS QMSVE+VKEKLWKKCGTSVNSM LEL
Sbjct: 1   MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSG+K++ L+D+S PLGF+SP DG+RLHIIDLDPSSVT+GGWLEDTSLVEKY ISEE 
Sbjct: 61  YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           Y KR D+FRKFKEK  SQNP A E+K  +NYME+LCANIKVGDRC+VEPG+ RG VK+VG
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESL PG+WVG+QYDEPLGK+DG VKG R+F+CP L G MVRPDKVK
Sbjct: 181 RAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy Swiss-Prot
Match: Q20728 (Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.7e-37
Identity = 90/212 (42.45%), Postives = 122/212 (57.55%), Query Frame = 0


Query: 22  NLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSIPLGFY 81
           N   F  + ++   MS+  +K+KL    GT+V+SM ++L+D       +LTD +  L   
Sbjct: 12  NATDFPMEKKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGDDQLKGELTDGAKSLKDL 71

Query: 82  SPLDGYRLHIIDLDPSSVTSGGW-LEDTSLVEKYQISEEAYEKRDDTFRKFKEKLASQNP 141
              DGYR+H +D     VT G    +D S+VEKY++S++ Y KR D+ R +K+K+  +  
Sbjct: 72  GVRDGYRIHAVD-----VTGGNEDFKDESMVEKYEMSDDTYGKRTDSVRAWKKKMQEEQG 131

Query: 142 SAFE-SKISDNYMEELCANIKVGDRCEVEPGKM---RGSVKFVGRAESLAPGFWVGVQYD 201
           SA      SD   EE   NI VG+RCEV  G     RG V +VG A     G WVGV+YD
Sbjct: 132 SAAPMENESDKLNEEAAKNIMVGNRCEVTVGAQMARRGEVAYVG-ATKFKEGVWVGVKYD 191

Query: 202 EPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           EP+GKNDG V G+RYFDC P +G  VRP  VK
Sbjct: 192 EPVGKNDGSVAGVRYFDCDPKYGGFVRPVDVK 217

[Close]

BLAST of Carg21104 vs. ExPASy Swiss-Prot
Match: Q5E951 (Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 88/217 (40.55%), Postives = 120/217 (55.30%), Query Frame = 0


Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSIPLGF 80
           ++L SF S  R+S  ++V   K KL    G+  + M LELY         L  +   LG 
Sbjct: 17  SSLNSFRSQKRYSRSLTVAEFKCKLQLVVGSPASCMELELYGPDDKFCCKLDQDDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEAYEKRDDTFRKF--KEKLASQ 140
           Y   DG R+H+ID   + +   G  ED S VEKY+IS+EAYE+R D+ R F  + KL   
Sbjct: 77  YPVDDGCRIHVIDHSGARL---GEYEDISKVEKYEISQEAYEQRQDSIRSFLKRNKLGRF 136

Query: 141 NPSAFESKISDNYM-----EELCANIKVGDRCEVE-PGK--MRGSVKFVGRAESLAPGFW 200
           N      + ++N       E   + I VG RCEV  PG+   RG+V +VG  +   PG+W
Sbjct: 137 NEEERAQQEAENSQRLIEEEAQASTIPVGSRCEVRTPGQPPRRGTVMYVGLTD-FKPGYW 196

Query: 201 VGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKV 228
           +G++YDEPLGKNDG V G RYF+C   +GA V+P  V
Sbjct: 197 IGIRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSVV 229

[Close]

BLAST of Carg21104 vs. ExPASy Swiss-Prot
Match: Q9D1E6 (Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 89/219 (40.64%), Postives = 121/219 (55.25%), Query Frame = 0


Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSIPLGF 80
           ++L SF S+ R+S  +++   K KL    G+  + M LELY       S L      LG 
Sbjct: 17  SSLNSFRSEKRYSRSLTIAEFKCKLELVVGSPASCMELELYGADDKFYSKLDQEDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEAYEKRDDTFRKF--------- 140
           Y   DG R+H+I  D S V  G + ED S VEKY+IS EAYE+R +T R F         
Sbjct: 77  YPVDDGCRIHVI--DHSGVRLGEY-EDVSKVEKYEISPEAYERRQNTVRSFMKRSKLGPY 136

Query: 141 KEKLASQNPSAFESKISDNYMEELCANIKVGDRCEV---EPGKMRGSVKFVGRAESLAPG 200
            E+L +Q  +    ++S+   +   + I VG RCEV   +    RG+V +VG  +   PG
Sbjct: 137 NEELRAQQEAEAAQRLSEEKAQ--ASAISVGSRCEVRAPDHSLRRGTVMYVGLTD-FKPG 196

Query: 201 FWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKV 228
           +WVGV+YDEPLGKNDG V G RYF+C   +GA V+P  V
Sbjct: 197 YWVGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKPSAV 229

[Close]

BLAST of Carg21104 vs. ExPASy Swiss-Prot
Match: Q99426 (Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 86/214 (40.19%), Postives = 119/214 (55.61%), Query Frame = 0


Query: 21  ANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLELYDDSGAKISDLTDNSIPLGF 80
           ++L +F S+ R+S  +++   K KL    G+  + M LELY       S L      LG 
Sbjct: 17  SSLNTFRSEKRYSRSLTIAEFKCKLELLVGSPASCMELELYGVDDKFYSKLDQEDALLGS 76

Query: 81  YSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEAYEKRDDTFRKF--KEKLASQ 140
           Y   DG R+H+ID   + +   G  ED S VEKY IS+EAY++R DT R F  + KL   
Sbjct: 77  YPVDDGCRIHVIDHSGARL---GEYEDVSRVEKYTISQEAYDQRQDTVRSFLKRSKLGRY 136

Query: 141 NP---SAFESKISDNYMEE--LCANIKVGDRCEVE---PGKMRGSVKFVGRAESLAPGFW 200
           N    +  E++ +    EE    ++I VG RCEV        RG+V +VG  +   PG+W
Sbjct: 137 NEEERAQQEAEAAQRLAEEKAQASSIPVGSRCEVRAAGQSPRRGTVMYVGLTD-FKPGYW 196

Query: 201 VGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRP 225
           +GV+YDEPLGKNDG V G RYF+C   +GA V+P
Sbjct: 197 IGVRYDEPLGKNDGSVNGKRYFECQAKYGAFVKP 226

[Close]

BLAST of Carg21104 vs. ExPASy TrEMBL
Match: A0A6J1EBG6 (tubulin-folding cofactor B OS=Cucurbita moschata OX=3662 GN=LOC111432491 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGK+RGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFD PPLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDSPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy TrEMBL
Match: A0A6J1HTU0 (tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.4e-125
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGK+RGSVKFVG
Sbjct: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKIRGSVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
            AESLAPGFWVGVQYDEPLGKNDG VKGIRYFDCPPLHGAMVRPDKVK
Sbjct: 181 WAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy TrEMBL
Match: A0A6J1DKD2 (tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 2.0e-122
Identity = 218/228 (95.61%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQ+IE DESVLLRVTHANLKSFTSDVRFSLQMS+ESVKEKLWKKCGTSVNSMCLEL
Sbjct: 1   MASRLQEIEADESVLLRVTHANLKSFTSDVRFSLQMSIESVKEKLWKKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSGAKISDLTDNS+PLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA
Sbjct: 61  YDDSGAKISDLTDNSLPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISD YMEELCANIKVGDRCEVEPG+ RG VKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDTYMEELCANIKVGDRCEVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDG VKGIRYFDCPPLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGMVKGIRYFDCPPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy TrEMBL
Match: A0A1S3C1L1 (tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 216/228 (94.74%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIE DESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSG+KISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGSKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRC+VEPG+ RG VKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC PLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. ExPASy TrEMBL
Match: A0A1S3C118 (tubulin-folding cofactor B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495804 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 216/228 (94.74%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MASRLQQIE DESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLW+KCGTSVNSMCLEL
Sbjct: 1   MASRLQQIEKDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWRKCGTSVNSMCLEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSG+KISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEK+QISEEA
Sbjct: 61  YDDSGSKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKFQISEEA 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           Y+KRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRC+VEPG+ RG VKFVG
Sbjct: 121 YDKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCQVEPGEKRGVVKFVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESLAPGFWVGVQYDEPLGKNDG VKGI YFDC PLHGAMVRPDKVK
Sbjct: 181 RAESLAPGFWVGVQYDEPLGKNDGTVKGIHYFDCSPLHGAMVRPDKVK 228

[Close]

BLAST of Carg21104 vs. TAIR 10
Match: AT3G10220.1 (tubulin folding cofactor B )

HSP 1 Score: 360.9 bits (925), Expect = 8.3e-100
Identity = 171/228 (75.00%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 1   MASRLQQIETDESVLLRVTHANLKSFTSDVRFSLQMSVESVKEKLWKKCGTSVNSMCLEL 60
           MA+   Q+E D+SV L +THANLKSF++D RFS QMSVE+VKEKLWKKCGTSVNSM LEL
Sbjct: 1   MATSRLQLEGDDSVHLHITHANLKSFSADARFSPQMSVEAVKEKLWKKCGTSVNSMALEL 60

Query: 61  YDDSGAKISDLTDNSIPLGFYSPLDGYRLHIIDLDPSSVTSGGWLEDTSLVEKYQISEEA 120
           YDDSG+K++ L+D+S PLGF+SP DG+RLHIIDLDPSSVT+GGWLEDTSLVEKY ISEE 
Sbjct: 61  YDDSGSKVAVLSDDSRPLGFFSPFDGFRLHIIDLDPSSVTTGGWLEDTSLVEKYNISEED 120

Query: 121 YEKRDDTFRKFKEKLASQNPSAFESKISDNYMEELCANIKVGDRCEVEPGKMRGSVKFVG 180
           Y KR D+FRKFKEK  SQNP A E+K  +NYME+LCANIKVGDRC+VEPG+ RG VK+VG
Sbjct: 121 YAKRTDSFRKFKEKRVSQNPVAAEAKTKENYMEDLCANIKVGDRCQVEPGEKRGMVKYVG 180

Query: 181 RAESLAPGFWVGVQYDEPLGKNDGKVKGIRYFDCPPLHGAMVRPDKVK 229
           RAESL PG+WVG+QYDEPLGK+DG VKG R+F+CP L G MVRPDKVK
Sbjct: 181 RAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECPRLQGGMVRPDKVK 228

The following BLAST results are available for this feature:

BLAST of Carg21104 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027664.1	3.7e-142	100.00	Tubulin-folding cofactor B [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6595702.1	5.7e-127	100.00	Tubulin-folding cofactor B, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925171.1	2.4e-125	99.12	tubulin-folding cofactor B [Cucurbita moschata]	[more]
XP_023517149.1	4.1e-125	98.68	tubulin-folding cofactor B [Cucurbita pepo subsp. pepo]	[more]
XP_022966444.1	7.0e-125	98.68	tubulin-folding cofactor B [Cucurbita maxima]	[more]

BLAST of Carg21104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67Z52	1.2e-98	75.00	Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1	[more]
Q20728	5.7e-37	42.45	Tubulin-specific chaperone B OS=Caenorhabditis elegans OX=6239 GN=tbcb-1 PE=1 SV...	[more]
Q5E951	1.1e-32	40.55	Tubulin-folding cofactor B OS=Bos taurus OX=9913 GN=TBCB PE=2 SV=1	[more]
Q9D1E6	1.4e-32	40.64	Tubulin-folding cofactor B OS=Mus musculus OX=10090 GN=Tbcb PE=1 SV=2	[more]
Q99426	1.6e-31	40.19	Tubulin-folding cofactor B OS=Homo sapiens OX=9606 GN=TBCB PE=1 SV=2	[more]

BLAST of Carg21104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBG6	1.2e-125	99.12	tubulin-folding cofactor B OS=Cucurbita moschata OX=3662 GN=LOC111432491 PE=4 SV...	[more]
A0A6J1HTU0	3.4e-125	98.68	tubulin-folding cofactor B OS=Cucurbita maxima OX=3661 GN=LOC111466096 PE=4 SV=1	[more]
A0A6J1DKD2	2.0e-122	95.61	tubulin-folding cofactor B OS=Momordica charantia OX=3673 GN=LOC111021286 PE=4 S...	[more]
A0A1S3C1L1	1.1e-120	94.74	tubulin-folding cofactor B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495804 PE...	[more]
A0A1S3C118	1.1e-120	94.74	tubulin-folding cofactor B isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495804 PE...	[more]

BLAST of Carg21104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10220.1	8.3e-100	75.00	tubulin folding cofactor B	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000938	CAP Gly-rich domain	SMART	SM01052	CAP_GLY_2	coord: 161..228 e-value: 8.3E-30 score: 115.0
IPR000938	CAP Gly-rich domain	PFAM	PF01302	CAP_GLY	coord: 161..227 e-value: 8.6E-23 score: 80.1
IPR000938	CAP Gly-rich domain	PROSITE	PS50245	CAP_GLY_2	coord: 181..223 score: 17.229548
IPR036859	CAP Gly-rich domain superfamily	GENE3D	2.30.30.190		coord: 155..232 e-value: 3.7E-27 score: 95.9
IPR036859	CAP Gly-rich domain superfamily	SUPERFAMILY	74924	Cap-Gly domain	coord: 103..228
IPR000626	Ubiquitin-like domain	PFAM	PF14560	Ubiquitin_2	coord: 14..98 e-value: 1.1E-26 score: 93.2
None	No IPR available	GENE3D	3.10.20.90		coord: 13..97 e-value: 8.9E-30 score: 104.9
None	No IPR available	PANTHER	PTHR18916	DYNACTIN 1-RELATED MICROTUBULE-BINDING	coord: 10..222
None	No IPR available	PANTHER	PTHR18916:SF76	TUBULIN FOLDING COFACTOR B	coord: 10..222
None	No IPR available	CDD	cd01789	Ubl_TBCB	coord: 14..93 e-value: 2.26184E-30 score: 106.5
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 9..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21104-RA	Carg21104-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0009793	embryo development ending in seed dormancy
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005515	protein binding