Carg21017 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21017
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Nudix hydrolase domain-containing protein
Location	Carg_Chr09: 8100325 .. 8101206 (+)
RNA-Seq Expression	Carg21017
Synteny	Carg21017

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCAGCCCCACCGCCAGTTCCGCCCCCACAGCCCATCTCCGATCTTCCTCACCTCACCAGATCTCCGCCTCTTCCTGACTTTTTCCTTGCCGCTCTCTCACTTTTCGTTTTCCTCTCTTCTTCCTCCTCCAGATCCTTTAAGTTTCCTCTTCTCTGTATTCAATCAAACCCTCGCCGGTTTCTGAAGACGCCGTCCATGTCCTTCTCACATCCCAACTCCGGCAGAACACCCCACGACGCTCATCGCCTCCACCCCTTCACCTCCCCTCAATCCCTCTCCGATTGGCTTAAACCTCGCTTGCCCTCCGATTCCTTTGCTTCTTGGGGCGTTAAGCCTGGCACCAAGAACGTCCACAACCTCTGGCTTGAACTCTCCGAAGGGGAAACTTCCCTTGCCGACTCCAACCCTCCTATCCGCACCGTTCAGGTCCTTTCTCTTCGAATTATTGATAACCACCGCCGAATTCTCCTCGAATCCCACCAGCAACTCTCCGATGGTACCCTACGGAATCGAAATCGACCCTTGTCGGAGAAAATGAAGCCCAATGAGACCCCTGAATCTGCCGTCTACCGGGCTGTCAAAGAAGAACTCGGTTCGATTCTTGGCGATTCCGATTGTTCTGAAATTGTCAAGATTGTTCCAGATTCATATAAAATGAAGATCGAGGAGAGAAACTCGGCTTCATACCCTGGTTTGCCGGCTTGTTACGTTTTGCATTCCATGGATGTATTGGTGGAAGGTTTACCCAAGGAAGACTTCTGCACTGTGGAGGAGGAGGAATATGTGAATTCTGAGGAGACGAGCATTGCGGACGAGGCTGTGTCCGTGAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTCTGGATTTTTGA

mRNA sequence

ATGCCATCAGCCCCACCGCCAGTTCCGCCCCCACAGCCCATCTCCGATCTTCCTCACCTCACCAGATCTCCGCCTCTTCCTGACTTTTTCCTTGCCGCTCTCTCACTTTTCGTTTTCCTCTCTTCTTCCTCCTCCAGATCCTTTAAGTTTCCTCTTCTCTGTATTCAATCAAACCCTCGCCGGTTTCTGAAGACGCCGTCCATGTCCTTCTCACATCCCAACTCCGGCAGAACACCCCACGACGCTCATCGCCTCCACCCCTTCACCTCCCCTCAATCCCTCTCCGATTGGCTTAAACCTCGCTTGCCCTCCGATTCCTTTGCTTCTTGGGGCGTTAAGCCTGGCACCAAGAACGTCCACAACCTCTGGCTTGAACTCTCCGAAGGGGAAACTTCCCTTGCCGACTCCAACCCTCCTATCCGCACCGTTCAGGTCCTTTCTCTTCGAATTATTGATAACCACCGCCGAATTCTCCTCGAATCCCACCAGCAACTCTCCGATGGTACCCTACGGAATCGAAATCGACCCTTGTCGGAGAAAATGAAGCCCAATGAGACCCCTGAATCTGCCGTCTACCGGGCTGTCAAAGAAGAACTCGGTTCGATTCTTGGCGATTCCGATTGTTCTGAAATTGTCAAGATTGTTCCAGATTCATATAAAATGAAGATCGAGGAGAGAAACTCGGCTTCATACCCTGGTTTGCCGGCTTGTTACGTTTTGCATTCCATGGATGTATTGGTGGAAGGTTTACCCAAGGAAGACTTCTGCACTGTGGAGGAGGAGGAATATGTGAATTCTGAGGAGACGAGCATTGCGGACGAGGCTGTGTCCGTGAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTCTGGATTTTTGA

Coding sequence (CDS)

ATGCCATCAGCCCCACCGCCAGTTCCGCCCCCACAGCCCATCTCCGATCTTCCTCACCTCACCAGATCTCCGCCTCTTCCTGACTTTTTCCTTGCCGCTCTCTCACTTTTCGTTTTCCTCTCTTCTTCCTCCTCCAGATCCTTTAAGTTTCCTCTTCTCTGTATTCAATCAAACCCTCGCCGGTTTCTGAAGACGCCGTCCATGTCCTTCTCACATCCCAACTCCGGCAGAACACCCCACGACGCTCATCGCCTCCACCCCTTCACCTCCCCTCAATCCCTCTCCGATTGGCTTAAACCTCGCTTGCCCTCCGATTCCTTTGCTTCTTGGGGCGTTAAGCCTGGCACCAAGAACGTCCACAACCTCTGGCTTGAACTCTCCGAAGGGGAAACTTCCCTTGCCGACTCCAACCCTCCTATCCGCACCGTTCAGGTCCTTTCTCTTCGAATTATTGATAACCACCGCCGAATTCTCCTCGAATCCCACCAGCAACTCTCCGATGGTACCCTACGGAATCGAAATCGACCCTTGTCGGAGAAAATGAAGCCCAATGAGACCCCTGAATCTGCCGTCTACCGGGCTGTCAAAGAAGAACTCGGTTCGATTCTTGGCGATTCCGATTGTTCTGAAATTGTCAAGATTGTTCCAGATTCATATAAAATGAAGATCGAGGAGAGAAACTCGGCTTCATACCCTGGTTTGCCGGCTTGTTACGTTTTGCATTCCATGGATGTATTGGTGGAAGGTTTACCCAAGGAAGACTTCTGCACTGTGGAGGAGGAGGAATATGTGAATTCTGAGGAGACGAGCATTGCGGACGAGGCTGTGTCCGTGAAGAAGCATTTCTGGAAATGGGTTAGTCTTGATTCTCTGGATTTTTGA

Protein sequence

MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPRRFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF

Homology

[Close]

BLAST of Carg21017 vs. NCBI nr
Match: XP_022922297.1 (uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothetical protein SDJN02_13920, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 585.1 bits (1507), Expect = 3.3e-163
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60
           MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR
Sbjct: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60

Query: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120
           RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH
Sbjct: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120

Query: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180
           NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK
Sbjct: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180

Query: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240
           MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL
Sbjct: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240

Query: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 293

[Close]

BLAST of Carg21017 vs. NCBI nr
Match: XP_023550799.1 (uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 583.9 bits (1504), Expect = 7.5e-163
Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60
           MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR
Sbjct: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60

Query: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120
           RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH
Sbjct: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120

Query: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180
           NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK
Sbjct: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180

Query: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240
           MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL
Sbjct: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240

Query: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           HSMDV+VEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 241 HSMDVVVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 293

[Close]

BLAST of Carg21017 vs. NCBI nr
Match: XP_022974352.1 (uncharacterized protein LOC111472979 [Cucurbita maxima])

HSP 1 Score: 575.5 bits (1482), Expect = 2.7e-160
Identity = 288/293 (98.29%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60
           MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFK PLLCIQSNPR
Sbjct: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKLPLLCIQSNPR 60

Query: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120
           RFLKTPSMSFSHPNSGRTPHDAHRLHPF SPQSLSDWLKPRLPSDSFASWGVKPGTKNVH
Sbjct: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120

Query: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180
           NLWLELSEGETSLADS PPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK
Sbjct: 121 NLWLELSEGETSLADSTPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180

Query: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240
           MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL
Sbjct: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240

Query: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           HSMDVLVEGLPKEDFCTVEEEEY NSEE+SIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 241 HSMDVLVEGLPKEDFCTVEEEEYANSEESSIADEAVSVKKHFWKWVSLDSLDF 293

[Close]

BLAST of Carg21017 vs. NCBI nr
Match: KAG6579291.1 (hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.1 bits (1411), Expect = 4.5e-152
Identity = 272/273 (99.63%), Postives = 273/273 (100.00%), Query Frame = 0


Query: 21  TRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPRRFLKTPSMSFSHPNSGRTPH 80
           +RSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPRRFLKTPSMSFSHPNSGRTPH
Sbjct: 55  SRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPRRFLKTPSMSFSHPNSGRTPH 114

Query: 81  DAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPI 140
           DAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPI
Sbjct: 115 DAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVHNLWLELSEGETSLADSNPPI 174

Query: 141 RTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELG 200
           RTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELG
Sbjct: 175 RTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEKMKPNETPESAVYRAVKEELG 234

Query: 201 SILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEE 260
           SILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEE
Sbjct: 235 SILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVLHSMDVLVEGLPKEDFCTVEE 294

Query: 261 EEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           EEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 295 EEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 327

[Close]

BLAST of Carg21017 vs. NCBI nr
Match: XP_022138298.1 (uncharacterized protein LOC111009508 [Momordica charantia])

HSP 1 Score: 454.5 bits (1168), Expect = 6.8e-124
Identity = 239/296 (80.74%), Postives = 256/296 (86.49%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP- 60
           MPS PPP+PPP PIS+L HL +S PLPDF+LAALSLFVF  SSSS+SFKFPLL  Q NP 
Sbjct: 5   MPSPPPPLPPPHPISNLTHLNKSTPLPDFWLAALSLFVFF-SSSSKSFKFPLLPFQFNPH 64

Query: 61  RRFLKTPSMSFSHPNSGRTPHDAHRL--HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTK 120
           RRFLK PSMS SH      PH   RL  H F SPQSLSDWL PRLPSDSFASWGVKPGTK
Sbjct: 65  RRFLKIPSMSLSH------PHPKTRLDNHHFASPQSLSDWLGPRLPSDSFASWGVKPGTK 124

Query: 121 NVHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPL 180
           NVHNLWLE+SEGETSLADSNPPIRTVQV+SLRI+D H R+L+ESHQ+LSDGTLRNRNRPL
Sbjct: 125 NVHNLWLEISEGETSLADSNPPIRTVQVVSLRILDKHNRVLVESHQELSDGTLRNRNRPL 184

Query: 181 SEKMKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPAC 240
           SEKMKPNETPESAVYRAVKEELGSI+GD DC EIV+IVP+SYKMKIEERNS SYPGLPAC
Sbjct: 185 SEKMKPNETPESAVYRAVKEELGSIIGDLDCCEIVRIVPNSYKMKIEERNSVSYPGLPAC 244

Query: 241 YVLHSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADE-AVSVKKHFWKWVSLDSLD 293
           YVLHSMDV VEGLP E+FCTVEEEEY  SEET IA + AVSVKKHFWKWVS DS+D
Sbjct: 245 YVLHSMDVWVEGLPDEEFCTVEEEEYEKSEETEIAHKAAVSVKKHFWKWVSADSVD 293

[Close]

BLAST of Carg21017 vs. ExPASy TrEMBL
Match: A0A6J1E2U8 (uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC111430319 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.6e-163
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60
           MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR
Sbjct: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60

Query: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120
           RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH
Sbjct: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120

Query: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180
           NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK
Sbjct: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180

Query: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240
           MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL
Sbjct: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240

Query: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 293

[Close]

BLAST of Carg21017 vs. ExPASy TrEMBL
Match: A0A6J1IA21 (uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.3e-160
Identity = 288/293 (98.29%), Postives = 289/293 (98.63%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNPR 60
           MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFK PLLCIQSNPR
Sbjct: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKLPLLCIQSNPR 60

Query: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120
           RFLKTPSMSFSHPNSGRTPHDAHRLHPF SPQSLSDWLKPRLPSDSFASWGVKPGTKNVH
Sbjct: 61  RFLKTPSMSFSHPNSGRTPHDAHRLHPFASPQSLSDWLKPRLPSDSFASWGVKPGTKNVH 120

Query: 121 NLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180
           NLWLELSEGETSLADS PPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK
Sbjct: 121 NLWLELSEGETSLADSTPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLSEK 180

Query: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240
           MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL
Sbjct: 181 MKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPACYVL 240

Query: 241 HSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           HSMDVLVEGLPKEDFCTVEEEEY NSEE+SIADEAVSVKKHFWKWVSLDSLDF
Sbjct: 241 HSMDVLVEGLPKEDFCTVEEEEYANSEESSIADEAVSVKKHFWKWVSLDSLDF 293

[Close]

BLAST of Carg21017 vs. ExPASy TrEMBL
Match: A0A6J1CCN3 (uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009508 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.3e-124
Identity = 239/296 (80.74%), Postives = 256/296 (86.49%), Query Frame = 0


Query: 1   MPSAPPPVPPPQPISDLPHLTRSPPLPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSNP- 60
           MPS PPP+PPP PIS+L HL +S PLPDF+LAALSLFVF  SSSS+SFKFPLL  Q NP 
Sbjct: 5   MPSPPPPLPPPHPISNLTHLNKSTPLPDFWLAALSLFVFF-SSSSKSFKFPLLPFQFNPH 64

Query: 61  RRFLKTPSMSFSHPNSGRTPHDAHRL--HPFTSPQSLSDWLKPRLPSDSFASWGVKPGTK 120
           RRFLK PSMS SH      PH   RL  H F SPQSLSDWL PRLPSDSFASWGVKPGTK
Sbjct: 65  RRFLKIPSMSLSH------PHPKTRLDNHHFASPQSLSDWLGPRLPSDSFASWGVKPGTK 124

Query: 121 NVHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPL 180
           NVHNLWLE+SEGETSLADSNPPIRTVQV+SLRI+D H R+L+ESHQ+LSDGTLRNRNRPL
Sbjct: 125 NVHNLWLEISEGETSLADSNPPIRTVQVVSLRILDKHNRVLVESHQELSDGTLRNRNRPL 184

Query: 181 SEKMKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPGLPAC 240
           SEKMKPNETPESAVYRAVKEELGSI+GD DC EIV+IVP+SYKMKIEERNS SYPGLPAC
Sbjct: 185 SEKMKPNETPESAVYRAVKEELGSIIGDLDCCEIVRIVPNSYKMKIEERNSVSYPGLPAC 244

Query: 241 YVLHSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADE-AVSVKKHFWKWVSLDSLD 293
           YVLHSMDV VEGLP E+FCTVEEEEY  SEET IA + AVSVKKHFWKWVS DS+D
Sbjct: 245 YVLHSMDVWVEGLPDEEFCTVEEEEYEKSEETEIAHKAAVSVKKHFWKWVSADSVD 293

[Close]

BLAST of Carg21017 vs. ExPASy TrEMBL
Match: A0A1S3AUP2 (uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 7.1e-119
Identity = 230/300 (76.67%), Postives = 252/300 (84.00%), Query Frame = 0


Query: 1   MPSAPPPVPP------PQPISDLPHLTRS-PPLPDFFLAALSLFVFLSSSS-SRSFKFPL 60
           MP APPP PP      PQPIS+L HL +S   LPDFFLAALSLF F SSSS S+SFKFP 
Sbjct: 1   MPPAPPPPPPPIPPPQPQPISNLTHLNKSTAALPDFFLAALSLFAFFSSSSPSKSFKFPA 60

Query: 61  LCIQSNPRRFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGV 120
             IQ NPRRFLK PS S   PNS        +   FTSPQSLS+WL+PRLPS SFASWGV
Sbjct: 61  FSIQLNPRRFLKIPSNSMEFPNSN------SKSLTFTSPQSLSEWLQPRLPSHSFASWGV 120

Query: 121 KPGTKNVHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRN 180
            PGTKN+HNLWLE+S+GETSLADSNPPIR + VLSLRIIDNH R+LLESHQQLSDGTLRN
Sbjct: 121 IPGTKNLHNLWLEISQGETSLADSNPPIRILHVLSLRIIDNHHRLLLESHQQLSDGTLRN 180

Query: 181 RNRPLSEKMKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYP 240
           RNRPLSEKMKPNETPESAVYRAV+EELGSIL DSDCS +V+IVPDSYK+KIEER+S SYP
Sbjct: 181 RNRPLSEKMKPNETPESAVYRAVQEELGSILADSDCSPLVRIVPDSYKLKIEERDSVSYP 240

Query: 241 GLPACYVLHSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLD 293
           GLPACYVLHSMD+ VEGLP  DFCTVE+EEYVNSEET+IAD+AVSVKKHFWKWVS +S+D
Sbjct: 241 GLPACYVLHSMDIRVEGLPDGDFCTVEKEEYVNSEETNIADQAVSVKKHFWKWVSPESVD 294

[Close]

BLAST of Carg21017 vs. ExPASy TrEMBL
Match: A0A0A0KJQ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 2.3e-117
Identity = 231/300 (77.00%), Postives = 254/300 (84.67%), Query Frame = 0


Query: 1   MPSA--PPPVPP--PQPISDLPHLTRS-PPLPDFFLAALSLFVFL--SSSSSRSFKFPLL 60
           MP A  PPPVPP  PQPIS+L HL +S   LPDFFLAALSLF FL  SSSSS+SFKFP  
Sbjct: 1   MPPAPPPPPVPPPQPQPISNLTHLNKSKAALPDFFLAALSLFAFLSSSSSSSKSFKFPAF 60

Query: 61  CIQSNPRRFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVK 120
            IQ NPRRF K PS+S   PNS        +   FTSPQSLS+WL+PRLPS SFASWGV 
Sbjct: 61  SIQLNPRRFFKIPSISMEFPNSN------SKSLTFTSPQSLSEWLQPRLPSHSFASWGVI 120

Query: 121 PGTKNVHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNR 180
           PGTKN+HNLWLE+S+GETSLADSNPPIRT+ VLSLRIIDNH R+LLESHQQLSDGTLRNR
Sbjct: 121 PGTKNLHNLWLEISQGETSLADSNPPIRTLHVLSLRIIDNHHRLLLESHQQLSDGTLRNR 180

Query: 181 NRPLSEKMKPNETPESAVYRAVKEELGSILGDSDCSEIVKIVPDSYKMKIEERNSASYPG 240
           NRPLSEKMKPNETPESAVYRAV+EELGSILGDSD S++V+IVPDSY++KIEER+S SYPG
Sbjct: 181 NRPLSEKMKPNETPESAVYRAVQEELGSILGDSDYSQLVRIVPDSYRLKIEERDSVSYPG 240

Query: 241 LPACYVLHSMDVLVEGLPKEDFCTVEEEEYVNSEETSIADEAVSVKKHFWKWVSLDSLDF 294
           L A YVLHSMDV VEGLP  DFCTVEEEEYVNSE+T+IAD AVSVKKHFWKWVS +S+DF
Sbjct: 241 LSASYVLHSMDVWVEGLPDGDFCTVEEEEYVNSEDTNIADHAVSVKKHFWKWVSPESVDF 294

[Close]

BLAST of Carg21017 vs. TAIR 10
Match: AT5G24460.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 287.0 bits (733), Expect = 1.8e-77
Identity = 163/301 (54.15%), Postives = 207/301 (68.77%), Query Frame = 0


Query: 7   PVPPPQPISDLPHLTRSPP--------LPDFFLAALSLFVFLSSSSSRSFKFPLLCIQSN 66
           P PP  P+ +  ++    P        LPD FLAA+SL +FL SS       PL+ +  N
Sbjct: 5   PSPPHTPLVNRRNINNHRPRNATVTSALPDIFLAAVSL-LFLWSSPK-----PLVSLPPN 64

Query: 67  PRRFLKTPSMSFSHPNSGRTPHDAHRLHPFTSPQSLSDWLKPRLPSDSFASWGVKPGTKN 126
              F   P        S R+P        F +PQSLSDWL+ RLPSDSFA+WGVKPGTKN
Sbjct: 65  RFSFPLNPRRRSITAMSRRSPPPPPPTQRFANPQSLSDWLESRLPSDSFAAWGVKPGTKN 124

Query: 127 VHNLWLELSEGETSLADSNPPIRTVQVLSLRIIDNHRRILLESHQQLSDGTLRNRNRPLS 186
           VHNLWLELS+GETSLADS PP+RTV V+++R+I  + RIL+E+HQ+LSDG++R R RPLS
Sbjct: 125 VHNLWLELSDGETSLADSTPPVRTVNVVTVRVIGKNGRILVEAHQELSDGSIRERFRPLS 184

Query: 187 EKMKPNETPESAVYRAVKEELGSIL-GDSD-CSEIVKIVPDSYKMKIEERNSASYPGLPA 246
           EKMKP E+P+ AV+RA+KEELGSI  GD D   + +KI+P +Y  ++EERNS SYPGLPA
Sbjct: 185 EKMKPEESPDEAVFRAIKEELGSIFNGDGDNIGQRIKILPGTYNRRVEERNSLSYPGLPA 244

Query: 247 CYVLHSMDVLVEGLPKEDFCTVEEEEY------VNSEETSIADEAVSVKKHFWKWVSLDS 292
            Y LHS++  VEGLP++DFCT EE+EY       +S ET  A  AV+VK+H+WKWVS DS
Sbjct: 245 RYALHSVNATVEGLPEQDFCT-EEKEYEGGDSTKDSVETLAAGNAVTVKRHYWKWVSPDS 298

The following BLAST results are available for this feature:

BLAST of Carg21017 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922297.1	3.3e-163	100.00	uncharacterized protein LOC111430319 [Cucurbita moschata] >KAG7025097.1 hypothet...	[more]
XP_023550799.1	7.5e-163	99.66	uncharacterized protein LOC111808831 [Cucurbita pepo subsp. pepo]	[more]
XP_022974352.1	2.7e-160	98.29	uncharacterized protein LOC111472979 [Cucurbita maxima]	[more]
KAG6579291.1	4.5e-152	99.63	hypothetical protein SDJN03_23739, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022138298.1	6.8e-124	80.74	uncharacterized protein LOC111009508 [Momordica charantia]	[more]

BLAST of Carg21017 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21017 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2U8	1.6e-163	100.00	uncharacterized protein LOC111430319 OS=Cucurbita moschata OX=3662 GN=LOC1114303...	[more]
A0A6J1IA21	1.3e-160	98.29	uncharacterized protein LOC111472979 OS=Cucurbita maxima OX=3661 GN=LOC111472979...	[more]
A0A6J1CCN3	3.3e-124	80.74	uncharacterized protein LOC111009508 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A1S3AUP2	7.1e-119	76.67	uncharacterized protein LOC103483001 OS=Cucumis melo OX=3656 GN=LOC103483001 PE=...	[more]
A0A0A0KJQ6	2.3e-117	77.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139030 PE=4 SV=1	[more]

BLAST of Carg21017 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24460.1	1.8e-77	54.15	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall;...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36395	RING-H2 ZINC FINGER PROTEIN	coord: 1..290
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 139..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21017-RA	Carg21017-RA	mRNA