Carg20971 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCCCACCGTCTCCGTGTCGTTTTAGCTTGCAATTAACTCCAAAAGAATCCCACTTCCCTTCCCGGCTTTGCTTCTCTCTCACTCACTTCGCGCTCTCTCTCCCACCGAACGGCGAAGCCATTAAAGCCAAATTTCCTGTCTCTGTTTTGCAGCTACACCATCAGTTTCAGGGAACATTCCTTGATTTCTCTGGCCCTTCCTTGCTTTCTTCTCTCTAATTCATTGATTTCCATCAAGAAATGGAGTTGGATCAACTCAGACCGGACAATCCTGCCATGACTTTCGACGAGGCTTCCATGGAGCGGAGCAAGAGCTTTGTTAAAGCCTTGCAGGTTTCGTCCTCGAACTTCTTGCTCTTCTTCCTTGATTTGTGTTTCGGATCTGATTCTCTCTCTTTTTGAACTCTTTTCGCTTGCGTGTTTCGCTTGGGGACTTTTGTGGTTTCCTTTTGGTTACTTGTTCTTTTTTACTCTAGGAATTTTGATTTTCTGTTTTTTCTTGATTTGCTTTGTCTGGCTTTACTAGTTGTGGTTGGTTGACTTTTTCTGAATTTGGATGCTCTAATTGTTGAGGTGATTGATTTTTCCGGAACACAGGGCTGTGAGGATTTTTGAAGGATTTAAGAAATTCATTTGAATTTTAATCCGAGCAACGAGTTTTGGATTAATTTGTCTCGATGTTCCTACTTTGACGGAATAATTTTATTTCCAAGTGTTTAAACAGTGAAGTGCAGTCTAGATTTGTCGTGTTTAGGCATGATACGGCAGAATTTTTTTAGATGTTTGGCAACACTGCGCGTAAGGGGAATTTTGCTTCACGTGATAGTTCCCGGATGAATCTGCGGTCCTCGTACTATATTCAGGAAAATCTGAGAGAAGAGCCATGTTTCTACCGAGATTGGCTGGAACATCTCATAATTTTGTAGAAAGTTAGTTCACTGTCAGGATGGTCTGGTTTTCGAGATAGAAGATTAACTTCTACTGTAGATCTTTGTTTTTCCTTGCTGAAATTTGTTGTCTTCATAGCTTTCCATTCTATTACTTGATTTTCTTAGTTTCATCTTTTATAGAAATATGCGAATCACACTGTTTGGACCTTTATACTTACATTCAGGAACTGAAGAATTTGAGGCCTCAGCTGTACTCTGCTGCTGAATATTGTGAGAAAACCTATCTTCACAGTGAGCAGAAGCAAATGTAAGCTTTTCTGGTTCACTTCTTGACAGTAATTTCATGATACAATTGTGGACATACTTCTGCTTGCCAATTAAACTTTTTAATCATGTACTAAGTTAATCTGTGATAGGATTTTTTTTCTTCTTCTTTTGTATTGGTATTTGGTATGAACGAGTTAACGTACATATAAGTAGGTCTGGTCTTCCATGCTTGAGGAATTTGGGGCAGGGAGCTTCCCTTTTCAACCACTAGTTAGATTGCTAGTTTAGAGGAATTGATATATCATGTAATGAGAACATAGGAAGTATAATAGACCACAAAAGAAATAGGCATGTAACCAATGTCAAAAAATTGCCACAGGGTGGTGGACAACCTAAAGGACTATGCTGTTCGGGCCCTTGTTAATGCTGTCGATCACCTTGGTACAGTGGCTTACAAGTTGACAGAGCTTCTCGAGCAGCAAACATCAGATGTATCAACCATGGAGCTTAAAGTCTCTTGTCTAAATCAGGTGCATATCTTGCTAATGTCTTATTGGGAAGTTAAGCTAATGATATCAAATGAAAAATGAAGTCTGTTTTTATTTTAGCAACTGCTTACATGTCAAACATATACGAGCAAAGAAGGCCTCAGGCAGCAGCAGCTGCTGGCATTGATCCCAAGACATCATAAGCATTATATATTACCAAGTAAGAATATCAGCCATCCTTCTGTTATCTCATCTAGCTATTATGGTGCCAAGTGAATTTTAACTTCACCCTCTCTCTCTCCCCCTGACCTTTTCCATCACATTTTGTTTACTCCCACTAGATTCTGTCAGTAAGAAGGTACATTTTAGTCCACATATACAAACCGATGCTAGGCAGCAACCCTTTCAAGCAAGAGGTCGTCTTCAGCCCTCAGGTATCTGGTTTATGGTTGACATATTTAGTTAATCTATTGTTCCCATGATTTATAAATTGCCGCTACTTTGTTCTTTTAGTTTATATTATCTTTATTTTTTAAATTTATAGGAACTTTAGTTTCTGTTGTCAGTTTAACATTCTGCTAATGTCTTGGTGTGAGCAATTTTTCATTTCCGTTCTAGGCATTCCTGCATCAAAGACACTTTCATGGCATTTAGCCTCGGAGACAAAGTCAACAAGGAAAGGTGGTACACATTCTTTGAACTGGTAAGTAGAGAGAATTTCTAGCATGATTTCAATTCTGTGTATTCCCCTTAATTCTTGATATTATTGTATCTGGCACTTTCTTATGACGTTATTTTTAATGATTATGCAGTAATGAGGACCAAAAAATTGCAGAAAAAACTTCTGGAATTTTCCATCTTATAGGTATATAATAATAGAACTGGTGCACCACCATGTTGAAAACTGGTGCATTTGTGTGATTGGATGCCTTTTTTTTTAGTTGTCTTGAAATGATAATTCTTAATGTCAAGCATGACCTTGTAGATAACGATGCTACCATCCGACCGAAATATTCAGCTGGTCACATTCAGCCATCAAATGGATTTCCTGCTTCAAGTGCAATTTTGCAAACGCTAGGTGGTACACACAGGGTAGGTTAAAATTGATTAGAGTACAGGCACTCCCAATTTTCTTCTGCGCTCATGCATGATAATTAGGAGCAATAAGCCTTTCTACAGGGTGTCGTTGGATTGTTTTCTTCAGGCTTTCCATCGTTTTGTGATGATCCATTTATTCATCTCTGTAATGGAATAGTTGTTTTAGGTCCATTTTGTTTGGATAACTTAACGTGAAATCACTTTTTATACCATTGCTTGATAAAATAAGAACAGTTCCTGTCTTATGTGGTTATCACATTTGCATATTTTGTTTAGCATGCGTAGGGACATGTATTCTTGTGTATACCATTGGTTGCTTGAGATGACGAATGCTGGTCTTCTAATAGGCCGTGATTTCAGGAATTCTTATCCTTTCTTATTCCTGACTGCATTAATTGCTTTCCTCTAGTTCCTCTCTATCTGTCTTGATGTTTGTAGAAAAATGTCAAATCTCACAGCCTATCTTTTACAGGAAGCGTTCGAGGGTTCCAAGCATTTGACAGCATTCAGGTCATTTGATGCTCCAAATCGACAAGAAAGAGTACACGTTCCTGCTCGCAGCAAAAGTGTGCTATCCGCTTTCTTTGTAAAACAGAAAACGCCAAAACTGAAGGCAGGTTCGGTCTCGTGAATTCTTCTTTGACAAAAATTACCAGCAATAACCTCAACTGTCATGGCGCAAATTCTACGTGTATTGTATCTTCCTCCGATCTCTGTCCATTTTATTCTCTTTTATGTGCATAAAAGTAATAAGGATTTAGGGAAGATGGTAGTCAACGGTGTCTATCCGTCAATTCCTGCTTGATATGATAATTGATAGGTTTGGTTCTTTGGACGGTTCATTTTCTGAATTGGTATTTTGTGGCTAACTAATTGATTGGTTGCCTTCACAACCCTGGTCTCATCGTGGCGATGAAGTCCAATGGTCTTTAGAGAAACAATTATGTAATGATTATATGGAAGATTTTCATTCTACAGTAGAAAATCTGGTCACCGTGGAATGGAAGAAAAAACTACAGGTCAAGAATTAGAAGACTTACCTAGAAACATGACAACTTTCTTAGAATATTTGATTTGTTGTTCGGGTTGAGTTGGTTTGTGTACGTGATAGGATCAATAAATCTATAGCAAAAAACATGTGTGTGCAAACATTATTTACCGATCATGAGCTTGAGTCTCACAACCGTGCTTGCATGTTTTTATATTTCGGAAGAAAAGAAGGGTAGGGAGCAATTGAATCTAAAATTGGCATCACTTGATTGTAATTTTATA TCTCTCCCACCGTCTCCGTGTCGTTTTAGCTTGCAATTAACTCCAAAAGAATCCCACTTCCCTTCCCGGCTTTGCTTCTCTCTCACTCACTTCGCGCTCTCTCTCCCACCGAACGGCGAAGCCATTAAAGCCAAATTTCCTGTCTCTGTTTTGCAGCTACACCATCAGTTTCAGGGAACATTCCTTGATTTCTCTGGCCCTTCCTTGCTTTCTTCTCTCTAATTCATTGATTTCCATCAAGAAATGGAGTTGGATCAACTCAGACCGGACAATCCTGCCATGACTTTCGACGAGGCTTCCATGGAGCGGAGCAAGAGCTTTGTTAAAGCCTTGCAGGAACTGAAGAATTTGAGGCCTCAGCTGTACTCTGCTGCTGAATATTGTGAGAAAACCTATCTTCACAGTGAGCAGAAGCAAATGGTGGTGGACAACCTAAAGGACTATGCTGTTCGGGCCCTTGTTAATGCTGTCGATCACCTTGGTACAGTGGCTTACAAGTTGACAGAGCTTCTCGAGCAGCAAACATCAGATGTATCAACCATGGAGCTTAAAGTCTCTTGTCTAAATCAGCAACTGCTTACATGTCAAACATATACGAGCAAAGAAGGCCTCAGGCAGCAGCAGCTGCTGGCATTGATCCCAAGACATCATAAGCATTATATATTACCAAATTCTGTCAGTAAGAAGGTACATTTTAGTCCACATATACAAACCGATGCTAGGCAGCAACCCTTTCAAGCAAGAGGTCGTCTTCAGCCCTCAGGTATCTGGTTTATGTTTAACATTCTGCTAATGTCTTGGTGTGAGCAATTTTTCATTTCCGTTCTAGGCATTCCTGCATCAAAGACACTTTCATGGCATTTAGCCTCGGAGACAAAGTCAACAAGGAAAGGTGGTACACATTCTTTGAACTGTAATGAGGACCAAAAAATTGCAGAAAAAACTTCTGGAATTTTCCATCTTATAGATAACGATGCTACCATCCGACCGAAATATTCAGCTGGTCACATTCAGCCATCAAATGGATTTCCTGCTTCAAGTGCAATTTTGCAAACGCTAGGTGGTACACACAGGGAAGCGTTCGAGGGTTCCAAGCATTTGACAGCATTCAGGTCATTTGATGCTCCAAATCGACAAGAAAGAGTACACGTTCCTGCTCGCAGCAAAAGTGTGCTATCCGCTTTCTTTGTAAAACAGAAAACGCCAAAACTGAAGGCAGGTTCGGTCTCGTGAATTCTTCTTTGACAAAAATTACCAGCAATAACCTCAACTGTCATGGCGCAAATTCTACGTGTATTGTATCTTCCTCCGATCTCTGTCCATTTTATTCTCTTTTATGTGCATAAAAGTAATAAGGATTTAGGGAAGATGGTAGTCAACGGTGTCTATCCGTCAATTCCTGCTTGATATGATAATTGATAGGTTTGGTTCTTTGGACGGTTCATTTTCTGAATTGGTATTTTGTGGCTAACTAATTGATTGGTTGCCTTCACAACCCTGGTCTCATCGTGGCGATGAAGTCCAATGGTCTTTAGAGAAACAATTATGTAATGATTATATGGAAGATTTTCATTCTACAGTAGAAAATCTGGTCACCGTGGAATGGAAGAAAAAACTACAGGTCAAGAATTAGAAGACTTACCTAGAAACATGACAACTTTCTTAGAATATTTGATTTGTTGTTCGGGTTGAGTTGGTTTGTGTACGTGATAGGATCAATAAATCTATAGCAAAAAACATGTGTGTGCAAACATTATTTACCGATCATGAGCTTGAGTCTCACAACCGTGCTTGCATGTTTTTATATTTCGGAAGAAAAGAAGGGTAGGGAGCAATTGAATCTAAAATTGGCATCACTTGATTGTAATTTTATA ATGGAGTTGGATCAACTCAGACCGGACAATCCTGCCATGACTTTCGACGAGGCTTCCATGGAGCGGAGCAAGAGCTTTGTTAAAGCCTTGCAGGAACTGAAGAATTTGAGGCCTCAGCTGTACTCTGCTGCTGAATATTGTGAGAAAACCTATCTTCACAGTGAGCAGAAGCAAATGGTGGTGGACAACCTAAAGGACTATGCTGTTCGGGCCCTTGTTAATGCTGTCGATCACCTTGGTACAGTGGCTTACAAGTTGACAGAGCTTCTCGAGCAGCAAACATCAGATGTATCAACCATGGAGCTTAAAGTCTCTTGTCTAAATCAGCAACTGCTTACATGTCAAACATATACGAGCAAAGAAGGCCTCAGGCAGCAGCAGCTGCTGGCATTGATCCCAAGACATCATAAGCATTATATATTACCAAATTCTGTCAGTAAGAAGGTACATTTTAGTCCACATATACAAACCGATGCTAGGCAGCAACCCTTTCAAGCAAGAGGTCGTCTTCAGCCCTCAGGTATCTGGTTTATGTTTAACATTCTGCTAATGTCTTGGTGTGAGCAATTTTTCATTTCCGTTCTAGGCATTCCTGCATCAAAGACACTTTCATGGCATTTAGCCTCGGAGACAAAGTCAACAAGGAAAGGTGGTACACATTCTTTGAACTGTAATGAGGACCAAAAAATTGCAGAAAAAACTTCTGGAATTTTCCATCTTATAGATAACGATGCTACCATCCGACCGAAATATTCAGCTGGTCACATTCAGCCATCAAATGGATTTCCTGCTTCAAGTGCAATTTTGCAAACGCTAGGTGGTACACACAGGGAAGCGTTCGAGGGTTCCAAGCATTTGACAGCATTCAGGTCATTTGATGCTCCAAATCGACAAGAAAGAGTACACGTTCCTGCTCGCAGCAAAAGTGTGCTATCCGCTTTCTTTGTAAAACAGAAAACGCCAAAACTGAAGGCAGGTTCGGTCTCGTGA MELDQLRPDNPAMTFDEASMERSKSFVKALQELKNLRPQLYSAAEYCEKTYLHSEQKQMVVDNLKDYAVRALVNAVDHLGTVAYKLTELLEQQTSDVSTMELKVSCLNQQLLTCQTYTSKEGLRQQQLLALIPRHHKHYILPNSVSKKVHFSPHIQTDARQQPFQARGRLQPSGIWFMFNILLMSWCEQFFISVLGIPASKTLSWHLASETKSTRKGGTHSLNCNEDQKIAEKTSGIFHLIDNDATIRPKYSAGHIQPSNGFPASSAILQTLGGTHREAFEGSKHLTAFRSFDAPNRQERVHVPARSKSVLSAFFVKQKTPKLKAGSVS Homology
BLAST of Carg20971 vs. NCBI nr
Match: KAG7019035.1 (Protein ABIL1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 651.7 bits (1680), Expect = 3.3e-183 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
BLAST of Carg20971 vs. NCBI nr
Match: XP_022924726.1 (protein ABIL1 [Cucurbita moschata] >XP_022980052.1 protein ABIL1 [Cucurbita maxima]) HSP 1 Score: 593.2 bits (1528), Expect = 1.4e-165 Identity = 307/329 (93.31%), Postives = 307/329 (93.31%), Query Frame = 0
BLAST of Carg20971 vs. NCBI nr
Match: XP_023526869.1 (protein ABIL1 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 585.1 bits (1507), Expect = 3.8e-163 Identity = 303/329 (92.10%), Postives = 305/329 (92.71%), Query Frame = 0
BLAST of Carg20971 vs. NCBI nr
Match: KAG6582639.1 (Protein ABIL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 585.1 bits (1507), Expect = 3.8e-163 Identity = 302/329 (91.79%), Postives = 305/329 (92.71%), Query Frame = 0
BLAST of Carg20971 vs. NCBI nr
Match: XP_038876394.1 (protein ABIL1 [Benincasa hispida]) HSP 1 Score: 565.1 bits (1455), Expect = 4.0e-157 Identity = 293/329 (89.06%), Postives = 299/329 (90.88%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy Swiss-Prot
Match: Q8S8M5 (Protein ABIL1 OS=Arabidopsis thaliana OX=3702 GN=ABIL1 PE=1 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 6.4e-97 Identity = 200/329 (60.79%), Postives = 231/329 (70.21%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy Swiss-Prot
Match: Q9AXA6 (Probable protein ABIL1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0622700 PE=2 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.7e-70 Identity = 161/319 (50.47%), Postives = 199/319 (62.38%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy Swiss-Prot
Match: Q6I588 (Probable protein ABIL4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0585400 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.0e-62 Identity = 145/316 (45.89%), Postives = 193/316 (61.08%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy Swiss-Prot
Match: Q6NMC6 (Protein ABIL3 OS=Arabidopsis thaliana OX=3702 GN=ABIL3 PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.5e-32 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy Swiss-Prot
Match: Q9M3A3 (Protein ABIL2 OS=Arabidopsis thaliana OX=3702 GN=ABIL2 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.2e-32 Identity = 70/131 (53.44%), Postives = 93/131 (70.99%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy TrEMBL
Match: A0A6J1IQD4 (protein ABIL1 OS=Cucurbita maxima OX=3661 GN=LOC111479568 PE=3 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 6.7e-166 Identity = 307/329 (93.31%), Postives = 307/329 (93.31%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy TrEMBL
Match: A0A6J1EA94 (protein ABIL1 OS=Cucurbita moschata OX=3662 GN=LOC111432141 PE=3 SV=1) HSP 1 Score: 593.2 bits (1528), Expect = 6.7e-166 Identity = 307/329 (93.31%), Postives = 307/329 (93.31%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy TrEMBL
Match: A0A5A7TZC6 (Protein ABIL1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001520 PE=3 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154 Identity = 293/331 (88.52%), Postives = 297/331 (89.73%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy TrEMBL
Match: A0A1S3AVU6 (protein ABIL1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483232 PE=3 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 2.0e-154 Identity = 293/331 (88.52%), Postives = 297/331 (89.73%), Query Frame = 0
BLAST of Carg20971 vs. ExPASy TrEMBL
Match: A0A0A0L3A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120490 PE=3 SV=1) HSP 1 Score: 553.1 bits (1424), Expect = 7.7e-154 Identity = 293/331 (88.52%), Postives = 297/331 (89.73%), Query Frame = 0
BLAST of Carg20971 vs. TAIR 10
Match: AT2G46225.2 (ABI-1-like 1 ) HSP 1 Score: 361.3 bits (926), Expect = 8.2e-100 Identity = 205/338 (60.65%), Postives = 239/338 (70.71%), Query Frame = 0
BLAST of Carg20971 vs. TAIR 10
Match: AT2G46225.1 (ABI-1-like 1 ) HSP 1 Score: 355.5 bits (911), Expect = 4.5e-98 Identity = 200/329 (60.79%), Postives = 231/329 (70.21%), Query Frame = 0
BLAST of Carg20971 vs. TAIR 10
Match: AT2G46225.3 (ABI-1-like 1 ) HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91 Identity = 192/329 (58.36%), Postives = 222/329 (67.48%), Query Frame = 0
BLAST of Carg20971 vs. TAIR 10
Match: AT5G24310.2 (ABL interactor-like protein 3 ) HSP 1 Score: 139.8 bits (351), Expect = 3.9e-33 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = 0
BLAST of Carg20971 vs. TAIR 10
Match: AT5G24310.1 (ABL interactor-like protein 3 ) HSP 1 Score: 139.8 bits (351), Expect = 3.9e-33 Identity = 69/137 (50.36%), Postives = 97/137 (70.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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