Carg20912 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20912
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	wiskott-Aldrich syndrome protein family member 2-like
Location	Carg_Chr06: 6591706 .. 6592776 (-)
RNA-Seq Expression	Carg20912
Synteny	Carg20912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGGTATTAAATTACCTAAAAAAAAAAAACTTAATAATTAAGCTTAATTAATTTTAATTTCAAACTATTTACGTTTCAAATTAGAGAAATAAATTGATACAAGATATTTGATTTATTTAAAAAAAAAATATTTATTTATATGATCCATAACAGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

mRNA sequence

TATTTCATATTTTATTTGGATTTTCATTTTCTTAGCTACCAAAACAATATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

Coding sequence (CDS)

ATGTCAAATTTTCCTCGCTTTGGCCTCTCACGACAACGTCCTTCCATGGCGGCGCCGCCAGTTCTCCCTACCACACTGCCTGCGGCAGAACTCAAGCCTGAAACTCAGCCGTTTTATAAGAGGAGCCAGAGTCTTCAACCTGCGGAGAAACCCACGTCACCCATTGCGTCGCCAAAATATGGACCTTCCGTCACACGTGTGCCCAGCCCACCGCCGCCCAAGGACGAACTATCGCCTCCGGTTTCGCCTGCAAAGAAATATCCCGACAGGTTAAGCCAAACATCCCCACTTCAGTCCCCGTCAAGATCGCTGCGAACATCGCCGCCGCCACCGCCACCTCTCGCTCTGCCGCCTACCCATTTCACCGCCGCCGTTAATAGGACCACCACTCAACCCCGAATTCAACCCGAGGTAGAGAAGAAAAGCATTGTGTACAACAAGACGGTCGAGAGGCCGGTGAAGTCTGACCGGTTGTCGGAGTATGGCTCGGGAAAGCCACACGAAAAGCAGAAGGCAGCGGAGTCTATAAACCTCGCCGGACATAATGTCGGCGCAGTCATGGAAATAGATAAGTCGTCGGTCGGCCACCGTTTGGGCGGAGAAACCGTAAGAAAGAACGAAACAGAAGGCGGCGACCTGGGCCGGGATGGAAAGGAGGAGAAGAAAAAGAAGGAAAAGAAGGAAAAGAAGGAAACGAAAGAGAAGAAAGTGCCGATGACTGCATTTATGAACAGCAATTTTCAGAGTGTAAACAATTCGGTTCTGTACGACTCGTCGTGTAGCCACCGTGATCCCGGCCTGCATCTTAAGTTTGCCGATGCGGCGGACGGCGACGGAGCCGCTGTTGATGGCCGTAAGAATTACAAGTCGTAG

Protein sequence

MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTHFTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS

Homology

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: KAG7028529.1 (hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 547.4 bits (1409), Expect = 7.7e-152
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMT 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMT
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMT 240

Query: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS
Sbjct: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 290

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: KAG6597059.1 (hypothetical protein SDJN03_10239, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.9 bits (1369), Expect = 3.3e-147
Identity = 288/300 (96.00%), Postives = 289/300 (96.33%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FT AVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FT-AVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDG----------KEEKKKKEKKEKK 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGD+GRDG          KEEKKKKEKKEKK
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEEKKKEEKKKKEKKEKK 240

Query: 241 ETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           ETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS
Sbjct: 241 ETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 299

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_023538978.1 (leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.8e-138
Identity = 274/292 (93.84%), Postives = 280/292 (95.89%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAA+LKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120
           GPSVTRVPSPPPPKDELSPPVSPA KYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FT AVN TTTQ  IQPEVEKKSIVYNKTVE+PV  DR SEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FT-AVNGTTTQRGIQPEVEKKSIVYNKTVEKPV--DRPSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKK--KEKKEKKETKEKKVP 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGD+GRDG EEKKK  K+KKEKKE KEKKVP
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKVP 240

Query: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK+
Sbjct: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 289

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_023538977.1 (leucine-rich repeat extensin-like protein 2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.9 bits (1291), Expect = 3.7e-138
Identity = 274/291 (94.16%), Postives = 279/291 (95.88%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAA+LKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAQLKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120
           GPSVTRVPSPPPPKDELSPPVSPA KYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPANKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FT AVN TTTQ  IQPEVEKKSIVYNKTVE+PV  DR SEYGSGKPHEKQKAAESINLAG
Sbjct: 121 FT-AVNGTTTQRGIQPEVEKKSIVYNKTVEKPV--DRPSEYGSGKPHEKQKAAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKK--KEKKEKKETKEKKVP 240
           HNVGAVMEIDKSSVGHRLGGETVRKNETEGGD+GRDG EEKKK  K+KKEKKE KEKKVP
Sbjct: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDVGRDGNEEKKKEEKKKKEKKEKKEKKVP 240

Query: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYK 290
           MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK
Sbjct: 241 MTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYK 288

[Close]

BLAST of Carg20912 vs. NCBI nr
Match: XP_022951357.1 (sulfated surface glycoprotein 185-like [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 2.9e-135
Identity = 272/291 (93.47%), Postives = 278/291 (95.53%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS-PPPPPPLALPPT 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS PPPPPPLALPPT
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT 120

Query: 121 HFTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLA 180
            FT AVN TTTQPRIQPEVEKKSIVYNKTVE+ VKSDR SEYGSGKP+EKQKA ESINLA
Sbjct: 121 QFT-AVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLA 180

Query: 181 GHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPM 240
           GHNVGAVMEIDKSSVGHRLGGETVRKNETEGG  GRDG EEKKK+EKK KKE K+K VPM
Sbjct: 181 GHNVGAVMEIDKSSVGHRLGGETVRKNETEGG--GRDGNEEKKKEEKK-KKEKKKKNVPM 240

Query: 241 TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK+
Sbjct: 241 TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 287

[Close]

BLAST of Carg20912 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 272/291 (93.47%), Postives = 278/291 (95.53%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS-PPPPPPLALPPT 120
           GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTS PPPPPPLALPPT
Sbjct: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPPLALPPT 120

Query: 121 HFTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLA 180
            FT AVN TTTQPRIQPEVEKKSIVYNKTVE+ VKSDR SEYGSGKP+EKQKA ESINLA
Sbjct: 121 QFT-AVNETTTQPRIQPEVEKKSIVYNKTVEKLVKSDRPSEYGSGKPYEKQKAVESINLA 180

Query: 181 GHNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPM 240
           GHNVGAVMEIDKSSVGHRLGGETVRKNETEGG  GRDG EEKKK+EKK KKE K+K VPM
Sbjct: 181 GHNVGAVMEIDKSSVGHRLGGETVRKNETEGG--GRDGNEEKKKEEKK-KKEKKKKNVPM 240

Query: 241 TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRK+YK+
Sbjct: 241 TAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKSYKA 287

[Close]

BLAST of Carg20912 vs. ExPASy TrEMBL
Match: A0A6J1ICG8 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=3661 GN=LOC111473600 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.3e-128
Identity = 256/290 (88.28%), Postives = 266/290 (91.72%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPKY 60
           MSNFPRFG  RQRPS+AAPPVLPTTLPAAE KPET PFY+ SQ+LQPAEKPTSPIASPKY
Sbjct: 1   MSNFPRFGRPRQRPSVAAPPVLPTTLPAAEHKPETLPFYRTSQTLQPAEKPTSPIASPKY 60

Query: 61  GPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120
           GPSVT VPSPPP KDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH
Sbjct: 61  GPSVTLVPSPPPAKDELSPPVSPAKKYPDRLSQTSPLQSPSRSLRTSPPPPPPLALPPTH 120

Query: 121 FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAG 180
           FTA  +  TTQPRIQ EVEKKSIVYNKTVE+PVKSDR  EYGSGK HEKQK AESINLAG
Sbjct: 121 FTAK-DGNTTQPRIQTEVEKKSIVYNKTVEKPVKSDRPLEYGSGKSHEKQKTAESINLAG 180

Query: 181 HNVGAVMEIDKSSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMT 240
           HNVGAVMEIDK S  HRLGGETVRKN+TEGGD GRDG EEKKKKEKK+K   K+KKVPMT
Sbjct: 181 HNVGAVMEIDKLSASHRLGGETVRKNKTEGGDGGRDGNEEKKKKEKKDK---KKKKVPMT 240

Query: 241 AFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           AFMNSNFQSVNNSVLYDSSC+HRDPGLHLKFADAADGDGAAVDGRKNYK+
Sbjct: 241 AFMNSNFQSVNNSVLYDSSCNHRDPGLHLKFADAADGDGAAVDGRKNYKA 286

[Close]

BLAST of Carg20912 vs. ExPASy TrEMBL
Match: A0A6J1GDX3 (wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita moschata OX=3662 GN=LOC111453294 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.6e-94
Identity = 213/279 (76.34%), Postives = 226/279 (81.00%), Query Frame = 0


Query: 21  VLPTTLPAAEL--KPETQPFYKRSQS----LQPAEKPTSPIASPKYGPSVTRVPSPPPPK 80
           V P  LP  EL  KP  +P      S      PA+KP SPIASPKYG SVTRVPSPPPPK
Sbjct: 11  VPPLKLPTIELKKKPAPEPASPLKSSPHWLPSPAKKPMSPIASPKYGSSVTRVPSPPPPK 70

Query: 81  DE-LSPPVSPAKKYPDR-LSQTSPLQSPSRSLRTS-PPPPPPLALPPTHFTAAVNRTTTQ 140
           DE LSPPVSPAKKYPDR ++QTSPLQSPSRSLRTS PPPPPPLALPPT FT AVN TTTQ
Sbjct: 71  DELLSPPVSPAKKYPDRWIAQTSPLQSPSRSLRTSPPPPPPPLALPPTQFT-AVNGTTTQ 130

Query: 141 PRIQPEVEKKSIVYNKTVERPVKSDRLSEYGSGKPHEKQKAAESINLAGHNVGAVMEIDK 200
           P+IQPE+E+KSIVYNKTVE+P K DR SEYGSGKPHEKQKAAE+INLAGHNVGAVMEIDK
Sbjct: 131 PKIQPEIEQKSIVYNKTVEKPAKFDRASEYGSGKPHEKQKAAEAINLAGHNVGAVMEIDK 190

Query: 201 SSVGHRLGGETVRKNETEGGDLGRDGKEEKKKKEKKEKKETKEKKVPMTAFMNSNFQSVN 260
           SSVGHRLGGETVR +        RDG EEKKKKEKKE        +PMTAF NSNFQSVN
Sbjct: 191 SSVGHRLGGETVRGSV-------RDGNEEKKKKEKKE--------LPMTAFTNSNFQSVN 250

Query: 261 NSVLYDSSCSHRDPGLHLKFADAADGDGAAVDGRKNYKS 291
           NSVLY SSC+HRDPGLHLKFADAADGDGAA DGRKNYK+
Sbjct: 251 NSVLYGSSCNHRDPGLHLKFADAADGDGAAADGRKNYKA 273

[Close]

BLAST of Carg20912 vs. ExPASy TrEMBL
Match: A0A5A7TZ24 (Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.0e-64
Identity = 169/307 (55.05%), Postives = 203/307 (66.12%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TSPPPPPPLALPPTH-FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLS-EYGS 180
              PP  PLALP    FT   N TT QPR+QPEVE K IVYNKTVE+P KS+R S EYGS
Sbjct: 121 AKTPPLSPLALPRNQVFTG--NGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGS 180

Query: 181 GKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDLGRDGKEEKK 240
            K H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE  GD+   G E+K 
Sbjct: 181 SKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDK- 240

Query: 241 KKEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 290
                 K ETK+K+ P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA V
Sbjct: 241 ------KTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIV 298

[Close]

BLAST of Carg20912 vs. ExPASy TrEMBL
Match: A0A1S3AV38 (zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.0e-64
Identity = 169/307 (55.05%), Postives = 203/307 (66.12%), Query Frame = 0


Query: 1   MSNFPRFGLSRQRPSMAAPPVLPTTLPAAELKPETQPF----------YKRSQSLQPAEK 60
           M+N PRFG +RQR     PPV     PA E + +  PF            R +S +P   
Sbjct: 1   MANLPRFGRARQRLPAVPPPVPAAAQPAVEPRYQILPFATTITTPAPASPRRESPRPLSS 60

Query: 61  P----TSPIASPKYGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLS-QTSPLQSPSRSLR 120
           P    TSP ASPKYG S TR+   P  K  +SPP S   KY +R + +T+P  SP++S R
Sbjct: 61  PPKKATSPFASPKYGDSRTRLDRSPAAKATMSPPDSVRDKYFERRNGETTPPLSPAKSRR 120

Query: 121 TSPPPPPPLALPPTH-FTAAVNRTTTQPRIQPEVEKKSIVYNKTVERPVKSDRLS-EYGS 180
              PP  PLALP    FT   N TT QPR+QPEVE K IVYNKTVE+P KS+R S EYGS
Sbjct: 121 AKTPPLSPLALPRNQVFTG--NGTTAQPRVQPEVETKGIVYNKTVEKPSKSNRSSGEYGS 180

Query: 181 GKPHEKQKAAESINLAGHNVGAVMEIDKSSVGHRLGGETVRKNETEG-GDLGRDGKEEKK 240
            K H+K++  E I L GHNVGAVMEI+KSS G+RLGGET++KNETE  GD+   G E+K 
Sbjct: 181 SKSHQKKQKPEVIKLKGHNVGAVMEINKSSTGYRLGGETLKKNETEDVGDVHGYGHEDK- 240

Query: 241 KKEKKEKKETKEKKVPMTAFMNSNFQSVNNSVLYDSSCSHRDPGLHLKFADAADGDGAAV 290
                 K ETK+K+ P+TAFMNSNFQSVNNS+L+DSSC+HRDPGLHL F DA DGDGA V
Sbjct: 241 ------KTETKKKEPPITAFMNSNFQSVNNSLLFDSSCNHRDPGLHLAFPDAVDGDGAIV 298

[Close]

BLAST of Carg20912 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 95/337 (28.19%), Postives = 129/337 (38.28%), Query Frame = 0


Query: 5   PRFGLSRQRPSMAAPPVLP-----TTLPAAELKPETQPFYKRSQSLQPAEKPTSPIASPK 64
           PR    R  P    PP  P        P  +  P T P  +RS    P  +  SP   PK
Sbjct: 49  PRQRQPRSPPRQQDPPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPK 108

Query: 65  YGPSVTRVPSPPPPKDELSPPVSPAKKYPDRLSQTSPLQSP----------SRSLRTSPP 124
                   P PPPP+   + P SP K+  + L    P   P          S S++T  P
Sbjct: 109 -----AATPPPPPPRSSYTSPPSP-KEVQEALPPRKPNSPPSPAHSSRSTTSESVKTRSP 168

Query: 125 --------PPPPLALPPTHFTAAV---NRTTTQPRI--------QPEVEKKSIVYNKTVE 184
                    P P  L P    A++    R TTQ  I          E    +  +N    
Sbjct: 169 SESENHRKAPSPRVLSPYSLPASLLHSERETTQKNILTAEKTSQTHETNHHNQNHNHDYN 228

Query: 185 RPVKSDRLSEYGSG---------KPHEKQKAAES--------INLAGHNVGAVMEIDKSS 244
           +    ++   Y            K H +  +++S        I +AG N GAVMEI +S 
Sbjct: 229 QNHNYNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRSP 288

Query: 245 VGHRLGGETVRKNETEGGDLGRDGKE------------EKKKKEKKEKKETKEKKVPMTA 279
            G++ GG     +    G  G  G+             E KKK  K         +PM A
Sbjct: 289 QGNKTGGSGTHSSRVSHG-TGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKGNSNLPMKA 348

The following BLAST results are available for this feature:

BLAST of Carg20912 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7028529.1	7.7e-152	100.00	hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6597059.1	3.3e-147	96.00	hypothetical protein SDJN03_10239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023538978.1	2.8e-138	93.84	leucine-rich repeat extensin-like protein 2 isoform X2 [Cucurbita pepo subsp. pe...	[more]
XP_023538977.1	3.7e-138	94.16	leucine-rich repeat extensin-like protein 2 isoform X1 [Cucurbita pepo subsp. pe...	[more]
XP_022951357.1	2.9e-135	93.47	sulfated surface glycoprotein 185-like [Cucurbita moschata]	[more]

BLAST of Carg20912 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHE5	1.4e-135	93.47	sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1ICG8	1.3e-128	88.28	wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1GDX3	1.6e-94	76.34	wiskott-Aldrich syndrome protein family member 2-like OS=Cucurbita moschata OX=3...	[more]
A0A5A7TZ24	5.0e-64	55.05	Zyxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00760 PE=...	[more]
A0A1S3AV38	5.0e-64	55.05	zyxin-like OS=Cucumis melo OX=3656 GN=LOC103483158 PE=4 SV=1	[more]

BLAST of Carg20912 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46630.1	1.2e-09	28.19	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 215..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..244
None	No IPR available	PANTHER	PTHR33472	OS01G0106600 PROTEIN	coord: 169..274
None	No IPR available	PANTHER	PTHR33472:SF1	EXTENSIN-RELATED	coord: 169..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20912-RA	Carg20912-RA	mRNA