Carg20853 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20853
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc finger protein 3-like
Location	Carg_Chr01: 11483080 .. 11483658 (-)
RNA-Seq Expression	Carg20853
Synteny	Carg20853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACTCCAAGCCGACAAAAGCCCACTTTTCGACGACGTCGAGGAAGACGGCGAGAAGAAAACCGGCGAACTTTCCGACGACCGGAGCACCGTTATGGGTCTTCACCTCTCAACAACAAAGACCAGAATTTTCTCATGCAATTATTGCCACAGAAAATTCTTCAGCTCCCAAGCTTTGGGTGGCCATCAAAATGCCCACAAACGAGAGAGGACTTTAGCCAAACGAGTTCAAAGATTCCATTGGGTGGCGGCCGCAATTCCGCTTCACGGCGGCGCGTTTCACAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTTTGTGTTTTTTTGGTGGGCCTACTTCCTCTCCTCCATTGTGGCCGAGACCAGTGTTTATGGGTCAGCAGCCAGCGGTGGAGCGGCTGACTACGGCGATTGGTGGCCGGAATTTTGGGAGGTATGATGACGTGGCTAGATGGCCGGCGATTGGAGGCTCAAACGCCGGTAATGAGAATATTGTTCATTCTCAGACCAAACAAGATCAAGGTCAGACCAATTTCCTTGACTTGTCTCTTAAACTCTAA

mRNA sequence

ATGGAACTCCAAGCCGACAAAAGCCCACTTTTCGACGACGTCGAGGAAGACGGCGAGAAGAAAACCGGCGAACTTTCCGACGACCGGAGCACCGTTATGGGTCTTCACCTCTCAACAACAAAGACCAGAATTTTCTCATGCAATTATTGCCACAGAAAATTCTTCAGCTCCCAAGCTTTGGGTGGCCATCAAAATGCCCACAAACGAGAGAGGACTTTAGCCAAACGAGTTCAAAGATTCCATTGGGTGGCGGCCGCAATTCCGCTTCACGGCGGCGCGTTTCACAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTTTGTGTTTTTTTGGTGGGCCTACTTCCTCTCCTCCATTGTGGCCGAGACCAGTGTTTATGGGTCAGCAGCCAGCGGTGGAGCGGCTGACTACGGCGATTGGTGGCCGGAATTTTGGGAGGTATGATGACGTGGCTAGATGGCCGGCGATTGGAGGCTCAAACGCCGGTAATGAGAATATTGTTCATTCTCAGACCAAACAAGATCAAGGTCAGACCAATTTCCTTGACTTGTCTCTTAAACTCTAA

Coding sequence (CDS)

ATGGAACTCCAAGCCGACAAAAGCCCACTTTTCGACGACGTCGAGGAAGACGGCGAGAAGAAAACCGGCGAACTTTCCGACGACCGGAGCACCGTTATGGGTCTTCACCTCTCAACAACAAAGACCAGAATTTTCTCATGCAATTATTGCCACAGAAAATTCTTCAGCTCCCAAGCTTTGGGTGGCCATCAAAATGCCCACAAACGAGAGAGGACTTTAGCCAAACGAGTTCAAAGATTCCATTGGGTGGCGGCCGCAATTCCGCTTCACGGCGGCGCGTTTCACAGACGGTCGTTGGGAATTCACGCGCACGCTCAGCAAATTCAGAAGCCTTTGTGTTTTTTTGGTGGGCCTACTTCCTCTCCTCCATTGTGGCCGAGACCAGTGTTTATGGGTCAGCAGCCAGCGGTGGAGCGGCTGACTACGGCGATTGGTGGCCGGAATTTTGGGAGGTATGATGACGTGGCTAGATGGCCGGCGATTGGAGGCTCAAACGCCGGTAATGAGAATATTGTTCATTCTCAGACCAAACAAGATCAAGGTCAGACCAATTTCCTTGACTTGTCTCTTAAACTCTAA

Protein sequence

MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQGQTNFLDLSLKL

Homology

[Close]

BLAST of Carg20853 vs. NCBI nr
Match: KAG6608284.1 (Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037636.1 Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398.7 bits (1023), Expect = 2.9e-107
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL
Sbjct: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180
           SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ
Sbjct: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180

Query: 181 GQTNFLDLSLKL 193
           GQTNFLDLSLKL
Sbjct: 181 GQTNFLDLSLKL 192

[Close]

BLAST of Carg20853 vs. NCBI nr
Match: XP_022940717.1 (zinc finger protein 3-like [Cucurbita moschata])

HSP 1 Score: 384.4 bits (986), Expect = 5.7e-103
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADK+PLFDDVEEDG+KKTGELSDDRSTV+GLHLSTTK RIFSCNYCHRKF SSQAL
Sbjct: 1   MELQADKTPLFDDVEEDGDKKTGELSDDRSTVLGLHLSTTKPRIFSCNYCHRKFISSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHW AAAIPLHGGAFHRRSLGIHAHAQQIQKPL FFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWAAAAIPLHGGAFHRRSLGIHAHAQQIQKPLGFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180
           SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ
Sbjct: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180

Query: 181 GQTNFLDLSLKL 193
           GQTNFLDLSLKL
Sbjct: 181 GQTNFLDLSLKL 192

[Close]

BLAST of Carg20853 vs. NCBI nr
Match: XP_023523409.1 (zinc finger protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 6.5e-99
Identity = 181/192 (94.27%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADK+PLF+DVEEDG+KKTGELSDDRSTV+ LHLSTTK RIFSCNYCHRKF SSQAL
Sbjct: 1   MELQADKTPLFEDVEEDGDKKTGELSDDRSTVLDLHLSTTKPRIFSCNYCHRKFLSSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPL FFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLGFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180
           S PLWPRPVFMGQQPAVERLTTAIG RNFGRYDDVAR PAIGGSNAGNENIVHSQTKQDQ
Sbjct: 121 SAPLWPRPVFMGQQPAVERLTTAIGDRNFGRYDDVARCPAIGGSNAGNENIVHSQTKQDQ 180

Query: 181 GQTNFLDLSLKL 193
           GQTNFLDLSLKL
Sbjct: 181 GQTNFLDLSLKL 192

[Close]

BLAST of Carg20853 vs. NCBI nr
Match: XP_022981144.1 (zinc finger protein 3-like [Cucurbita maxima])

HSP 1 Score: 368.6 bits (945), Expect = 3.2e-98
Identity = 180/197 (91.37%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADK+PLF+DVEEDG+++TGELSDDR TV+ LHLSTTK RIFSCNYCHRKFFSSQAL
Sbjct: 1   MELQADKTPLFEDVEEDGDEETGELSDDRRTVLDLHLSTTKPRIFSCNYCHRKFFSSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFH RSLGIHAHAQQIQKPL FFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHGRSLGIHAHAQQIQKPLGFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE-----NIVHSQ 180
           SPPLWPRPVFMGQQPAVERLTT IGGRNFGRYDDVARWPAIGGSNAGNE     NIVHSQ
Sbjct: 121 SPPLWPRPVFMGQQPAVERLTTTIGGRNFGRYDDVARWPAIGGSNAGNENINHDNIVHSQ 180

Query: 181 TKQDQGQTNFLDLSLKL 193
           TKQDQGQTNFLDLSLKL
Sbjct: 181 TKQDQGQTNFLDLSLKL 197

[Close]

BLAST of Carg20853 vs. NCBI nr
Match: KAG7024430.1 (Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 2.5e-74
Identity = 149/203 (73.40%), Postives = 164/203 (80.79%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLS------TTKTRIFSCNYCHRKF 60
           ME   D++PL  D EED E++T ELSDDRS+++ L LS      TTK R+FSCNYC RKF
Sbjct: 1   MEPLTDRNPLSGDGEEDDERETAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 60

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCF 120
           FSSQALGGHQNAHKRERTLAKRVQRF W  AAIPLHGGAF RRSLGIHAH+QQIQKP+ F
Sbjct: 61  FSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 120

Query: 121 FGGPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE----- 180
           F GP  +  LWPRP+FMGQQPAV RLT  +GGRNFGR+DDVA WPAIG SNAGNE     
Sbjct: 121 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 180

Query: 181 NIVHSQTKQDQGQTNFLDLSLKL 193
           +IVHSQTKQDQ QTNFLDLSLKL
Sbjct: 181 SIVHSQTKQDQDQTNFLDLSLKL 202

[Close]

BLAST of Carg20853 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.2e-17
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 12  DDVEEDGEKKTGELS-----DDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQALGGHQNA 71
           +D E D    + EL+     DD ++++    ++T+ ++FSCNYC R F+SSQALGGHQNA
Sbjct: 23  EDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNA 82

Query: 72  HKRERTLAKRVQRFHWVAAA---------IPLHGGAFHRRSLGIHAHA 106
           HKRERTLAKR QR    A+A         +P HG   + RSLGI AH+
Sbjct: 83  HKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]

BLAST of Carg20853 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-16
Identity = 69/181 (38.12%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWV------------------- 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERTLAKR Q +                      
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 103 --AAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTSS------PPLWPRPVFMGQQP 162
              A++PLHG   +R +LGI AH+  I KP  F G  T+S        +  +P      P
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHS-TIHKP-SFLGRQTTSLSHVFKQSIHQKPTIGKMLP 185

Query: 163 AVERLTTAIGGRNFGRYDDVARWPAIGGSN---AGNENIVHSQTKQ-DQGQTNFLDLSLK 193
             E+    + G N               SN   A  E I H ++ Q D  Q   +DL+LK
Sbjct: 186 --EKFHLEVAGNN--------------NSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLK 228

[Close]

BLAST of Carg20853 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRF-------------HWVAAA--- 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERTLAKR  R              ++ AAA   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 103 ----IPLHGGAFHR----RSLGIHAHA 106
               +PLHG         R+LGI AH+
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHS 169

[Close]

BLAST of Carg20853 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHR------ 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERT+AKR      +        G  HR      
Sbjct: 57  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMF-------GHHHRPYTYTS 116

Query: 103 RSLGIHAHA 106
            SLG+ AH+
Sbjct: 117 SSLGMQAHS 118

[Close]

BLAST of Carg20853 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0


Query: 43 RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKR 77
          R+FSCNYC RKF+SSQALGGHQNAHK ERTLAK+
Sbjct: 50 RVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

[Close]

BLAST of Carg20853 vs. ExPASy TrEMBL
Match: A0A6J1FKE2 (zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.8e-103
Identity = 185/192 (96.35%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADK+PLFDDVEEDG+KKTGELSDDRSTV+GLHLSTTK RIFSCNYCHRKF SSQAL
Sbjct: 1   MELQADKTPLFDDVEEDGDKKTGELSDDRSTVLGLHLSTTKPRIFSCNYCHRKFISSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHW AAAIPLHGGAFHRRSLGIHAHAQQIQKPL FFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWAAAAIPLHGGAFHRRSLGIHAHAQQIQKPLGFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180
           SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ
Sbjct: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNENIVHSQTKQDQ 180

Query: 181 GQTNFLDLSLKL 193
           GQTNFLDLSLKL
Sbjct: 181 GQTNFLDLSLKL 192

[Close]

BLAST of Carg20853 vs. ExPASy TrEMBL
Match: A0A6J1J146 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98
Identity = 180/197 (91.37%), Postives = 186/197 (94.42%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQAL 60
           MELQADK+PLF+DVEEDG+++TGELSDDR TV+ LHLSTTK RIFSCNYCHRKFFSSQAL
Sbjct: 1   MELQADKTPLFEDVEEDGDEETGELSDDRRTVLDLHLSTTKPRIFSCNYCHRKFFSSQAL 60

Query: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTS 120
           GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFH RSLGIHAHAQQIQKPL FFGGPTS
Sbjct: 61  GGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHGRSLGIHAHAQQIQKPLGFFGGPTS 120

Query: 121 SPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE-----NIVHSQ 180
           SPPLWPRPVFMGQQPAVERLTT IGGRNFGRYDDVARWPAIGGSNAGNE     NIVHSQ
Sbjct: 121 SPPLWPRPVFMGQQPAVERLTTTIGGRNFGRYDDVARWPAIGGSNAGNENINHDNIVHSQ 180

Query: 181 TKQDQGQTNFLDLSLKL 193
           TKQDQGQTNFLDLSLKL
Sbjct: 181 TKQDQGQTNFLDLSLKL 197

[Close]

BLAST of Carg20853 vs. ExPASy TrEMBL
Match: A0A6J1F839 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.0e-74
Identity = 148/203 (72.91%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLS------TTKTRIFSCNYCHRKF 60
           ME   D++PL  D EED E++  ELSDDRS+++ L LS      TTK R+FSCNYC RKF
Sbjct: 42  MEPLTDRNPLSGDGEEDDEREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 101

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCF 120
           FSSQALGGHQNAHKRERTLAKRVQRF W  AAIPLHGGAF RRSLGIHAH+QQIQKP+ F
Sbjct: 102 FSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 161

Query: 121 FGGPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE----- 180
           F GP  +  LWPRP+FMGQQPAV RLT  +GGRNFGR+DDVA WPAIG SNAGNE     
Sbjct: 162 FSGPGPTSQLWPRPLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 221

Query: 181 NIVHSQTKQDQGQTNFLDLSLKL 193
           +IVHSQTKQDQ QTNFLDLSLKL
Sbjct: 222 SIVHSQTKQDQDQTNFLDLSLKL 243

[Close]

BLAST of Carg20853 vs. ExPASy TrEMBL
Match: A0A6J1IG94 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 146/203 (71.92%), Postives = 162/203 (79.80%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHLS------TTKTRIFSCNYCHRKF 60
           ME   D++PL  D EED +++  ELSDDRS+++ L LS      TTK R+FSCNYC RKF
Sbjct: 41  MEPLTDRNPLSGDGEEDDDREPAELSDDRSSLLDLQLSSNSSDATTKPRVFSCNYCQRKF 100

Query: 61  FSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRRSLGIHAHAQQIQKPLCF 120
           FSSQALGGHQNAHKRERTLAKRVQRF W  AAIPLHGGAF RRSLGIHAH+QQIQKP+ F
Sbjct: 101 FSSQALGGHQNAHKRERTLAKRVQRFDW-GAAIPLHGGAFDRRSLGIHAHSQQIQKPVGF 160

Query: 121 FGGPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAGNE----- 180
           F GP  +  LWPR +FMGQQPAV RLT  +GGRNFGR+DDVA WPAIG SNAGNE     
Sbjct: 161 FSGPGPTSQLWPRTLFMGQQPAVGRLTPELGGRNFGRFDDVAGWPAIGSSNAGNERSNNV 220

Query: 181 NIVHSQTKQDQGQTNFLDLSLKL 193
           +IVHSQTKQDQ QTNFLDLSLKL
Sbjct: 221 SIVHSQTKQDQDQTNFLDLSLKL 242

[Close]

BLAST of Carg20853 vs. ExPASy TrEMBL
Match: A0A5A7VC97 (Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003190 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.9e-64
Identity = 143/214 (66.82%), Postives = 158/214 (73.83%), Query Frame = 0


Query: 1   MELQADKSPLFDDVEEDGEKKTGELSDDRSTVMGLHL-------STTKTRIFSCNYCHRK 60
           ME   D +P   + EED EK   E S++RS+++ L L       ST K RIFSCNYC RK
Sbjct: 1   MESHTDGNPFSGEGEEDDEK---EFSEERSSLLELQLSSNNSSDSTNKPRIFSCNYCQRK 60

Query: 61  FFSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHRR-SLGIHAHAQQIQKPL 120
           FFSSQALGGHQNAHKRERTLAKRVQ+F W AAAIPLHGGAF RR SLG+HAH+QQIQKP 
Sbjct: 61  FFSSQALGGHQNAHKRERTLAKRVQKFDW-AAAIPLHGGAFDRRSSLGLHAHSQQIQKPP 120

Query: 121 C---FFG--GPTSSPPLWPRPVFMGQQPAVERLTTAIGGRNFGRYDDVARWPAIGGSNAG 180
               FFG  GP+S   LWPRP+FMGQQPAV RL   +GGRNFGRYDDVA W AIG SNAG
Sbjct: 121 AVGLFFGGAGPSSGSQLWPRPMFMGQQPAVGRLMAELGGRNFGRYDDVAEWTAIGTSNAG 180

Query: 181 NE---------NIVHSQTKQDQGQTNFLDLSLKL 193
           NE         NIVHSQT+QD+ QTNFLDLSLKL
Sbjct: 181 NESRNNNNNNSNIVHSQTQQDKDQTNFLDLSLKL 210

[Close]

BLAST of Carg20853 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 72/182 (39.56%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 38  STTKTRIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWVA--------AAIPL 97
           ++T+ ++FSCNYC R F+SSQALGGHQNAHKRERTLAKR QR    A        A +P 
Sbjct: 97  TSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFAPVPF 156

Query: 98  HGGAFHRRSLGIHAHAQQIQKPLCF--FGGPTSSPPLWPRPVFMGQQPAVERLTTAIGG- 157
           H G +  R+LGI AH+    KP  +  +GG       W R + + QQPA+ +LT+     
Sbjct: 157 H-GQYSNRTLGIQAHSMS-HKPSSYNVYGGEYGQIN-WSR-IPLVQQPAIAKLTSTENHY 216

Query: 158 ---------------RNFGRYDDVARWPA-IGGSNAGNENIVHSQTKQDQGQTNFLDLSL 193
                           N GR+ DV R P     S          +  +++ Q N LDLSL
Sbjct: 217 NHHQMMIAPPLTSTCENIGRF-DVGRIPVEFPTSELWQRGEELLKPAEEEKQKN-LDLSL 272

[Close]

BLAST of Carg20853 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-18
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 12  DDVEEDGEKKTGELS-----DDRSTVMGLHLSTTKTRIFSCNYCHRKFFSSQALGGHQNA 71
           +D E D    + EL+     DD ++++    ++T+ ++FSCNYC R F+SSQALGGHQNA
Sbjct: 23  EDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGGHQNA 82

Query: 72  HKRERTLAKRVQRFHWVAAA---------IPLHGGAFHRRSLGIHAHA 106
           HKRERTLAKR QR    A+A         +P HG   + RSLGI AH+
Sbjct: 83  HKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHS 130

[Close]

BLAST of Carg20853 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 86.3 bits (212), Expect = 3.0e-17
Identity = 69/181 (38.12%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWV------------------- 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERTLAKR Q +                      
Sbjct: 66  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRF 125

Query: 103 --AAAIPLHGGAFHRRSLGIHAHAQQIQKPLCFFGGPTSS------PPLWPRPVFMGQQP 162
              A++PLHG   +R +LGI AH+  I KP  F G  T+S        +  +P      P
Sbjct: 126 ASMASLPLHGSVNNRSTLGIQAHS-TIHKP-SFLGRQTTSLSHVFKQSIHQKPTIGKMLP 185

Query: 163 AVERLTTAIGGRNFGRYDDVARWPAIGGSN---AGNENIVHSQTKQ-DQGQTNFLDLSLK 193
             E+    + G N               SN   A  E I H ++ Q D  Q   +DL+LK
Sbjct: 186 --EKFHLEVAGNN--------------NSNMVAAKLERIGHFKSNQEDHNQFKKIDLTLK 228

[Close]

BLAST of Carg20853 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRF-------------HWVAAA--- 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERTLAKR  R              ++ AAA   
Sbjct: 83  RVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAA 142

Query: 103 ----IPLHGGAFHR----RSLGIHAHA 106
               +PLHG         R+LGI AH+
Sbjct: 143 ALSCLPLHGSGNGNMTSFRTLGIRAHS 169

[Close]

BLAST of Carg20853 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 38/69 (55.07%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 43  RIFSCNYCHRKFFSSQALGGHQNAHKRERTLAKRVQRFHWVAAAIPLHGGAFHR------ 102
           R+FSCNYC RKF+SSQALGGHQNAHKRERT+AKR      +        G  HR      
Sbjct: 57  RVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMF-------GHHHRPYTYTS 116

Query: 103 RSLGIHAHA 106
            SLG+ AH+
Sbjct: 117 SSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of Carg20853 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6608284.1	2.9e-107	100.00	Zinc finger protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG70376...	[more]
XP_022940717.1	5.7e-103	96.35	zinc finger protein 3-like [Cucurbita moschata]	[more]
XP_023523409.1	6.5e-99	94.27	zinc finger protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981144.1	3.2e-98	91.37	zinc finger protein 3-like [Cucurbita maxima]	[more]
KAG7024430.1	2.5e-74	73.40	Zinc finger protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Carg20853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39262	2.2e-17	47.22	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q42485	4.2e-16	38.12	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	1.5e-13	51.72	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	2.4e-11	55.07	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	2.6e-10	85.29	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of Carg20853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKE2	2.8e-103	96.35	zinc finger protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446227 PE=4 SV...	[more]
A0A6J1J146	1.6e-98	91.37	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480379 PE=4 SV=1	[more]
A0A6J1F839	6.0e-74	72.91	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443188 PE=4 SV...	[more]
A0A6J1IG94	1.1e-72	71.92	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476654 PE=4 SV=1	[more]
A0A5A7VC97	1.9e-64	66.82	Zinc finger protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Carg20853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	1.2e-18	39.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G25160.1	1.6e-18	47.22	zinc finger protein 3	[more]
AT1G80730.1	3.0e-17	38.12	zinc-finger protein 1	[more]
AT1G66140.1	1.1e-14	51.72	zinc finger protein 4	[more]
AT1G24625.1	1.7e-12	55.07	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 22..84 e-value: 6.6E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 39..192
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 47..67
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 45..72 score: 11.322948
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 41..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20853-RA	Carg20853-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane