Carg20757 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCAGTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAACCCCACAGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCAGTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAACCCCACAGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA ATGGAAGATATGAACACCCTTGCCGCCGACTGCATTGTCATATGCTGTTGCTGCCAATGCCTGGCGTTGCATATCCTTCTCCTTCTGTTACTCAAGCTTCCCTGTAAACTCGTTCGAAAAACGAGAGACTTCGCCAAAAGAAGGCTAAGAATGAGAGAAAAAGAGGAAAAGATGGTAATGGAAGATGAGGTTAGAGGCAGTAGTAATGGAAGCTGTATGAGAAGTGAAGAAGATGGGTTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAGGGTGATGCAGGATTTGCATGAGAAGGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAGAAAGGGTAACTCAGTTTCAGGTTCCTGCAGAGATGAAGAGCCATTTAACCCCACAGATGTACAGTATCAATTAATTCAAGTAATACCTTCTACATGA MEDMNTLAADCIVICCCCQCLALHILLLLLLKLPCKLVRKTRDFAKRRLRMREKEEKMVMEDEVRGSSNGSCMRSEEDGLGLSCCMEEIERVMQDLHEKGEFGFGSFWGRKGNSVSGSCRDEEPFNPTDVQYQLIQVIPST Homology
BLAST of Carg20757 vs. NCBI nr
Match: KAG7017145.1 (hypothetical protein SDJN02_22257, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 283.9 bits (725), Expect = 7.7e-73 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Carg20757 vs. NCBI nr
Match: XP_022928895.1 (uncharacterized protein LOC111435666 [Cucurbita moschata]) HSP 1 Score: 279.6 bits (714), Expect = 1.4e-71 Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Carg20757 vs. NCBI nr
Match: XP_022969822.1 (uncharacterized protein LOC111468906 [Cucurbita maxima]) HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69 Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0
BLAST of Carg20757 vs. NCBI nr
Match: XP_023551308.1 (uncharacterized protein LOC111809163 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69 Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0
BLAST of Carg20757 vs. NCBI nr
Match: XP_008457185.1 (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo] >KAA0039665.1 uncharacterized protein E6C27_scaffold744G001560 [Cucumis melo var. makuwa] >TYJ95549.1 uncharacterized protein E5676_scaffold767G00440 [Cucumis melo var. makuwa]) HSP 1 Score: 224.6 bits (571), Expect = 5.5e-55 Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Carg20757 vs. ExPASy TrEMBL
Match: A0A6J1ESS6 (uncharacterized protein LOC111435666 OS=Cucurbita moschata OX=3662 GN=LOC111435666 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.0e-72 Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0
BLAST of Carg20757 vs. ExPASy TrEMBL
Match: A0A6J1HXD6 (uncharacterized protein LOC111468906 OS=Cucurbita maxima OX=3661 GN=LOC111468906 PE=4 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 6.6e-70 Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0
BLAST of Carg20757 vs. ExPASy TrEMBL
Match: A0A5D3B961 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold767G00440 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55 Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Carg20757 vs. ExPASy TrEMBL
Match: A0A1S3C4I0 (uncharacterized protein LOC103496924 OS=Cucumis melo OX=3656 GN=LOC103496924 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55 Identity = 119/147 (80.95%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of Carg20757 vs. ExPASy TrEMBL
Match: A0A0A0LKX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G116260 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.0e-54 Identity = 117/146 (80.14%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of Carg20757 vs. TAIR 10
Match: AT3G25597.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-15 Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 0
BLAST of Carg20757 vs. TAIR 10
Match: AT1G26140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68700.1); Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 5.6e-13 Identity = 46/115 (40.00%), Postives = 64/115 (55.65%), Query Frame = 0
BLAST of Carg20757 vs. TAIR 10
Match: AT1G68700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G26140.1); Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.2e-04 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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