Carg20637 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20637
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr13: 575132 .. 577093 (-)
RNA-Seq ExpressionCarg20637
SyntenyCarg20637
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGCGCTTCGGACCCCCCAATATACCCAATACCCACCTTTGTCCCGCCGCCATTCTTCCGCTCATTCCCCTTCAAAACCCTCAATCTGCTCCGTCTCCTTAAACTCTTCAACCGCTGCAAATTCCAATAAAAATCAGTTGATTCAATCGCTGTGCAAACAGGGCAATCTAAAACAAGCCCTTTTGCTCCTCTCCCATGAATCCAATCCTACCCAACGGACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCCTTGACGTCCATCGACGCCTCGTCGATGGGGGATTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGAATCTGTTGACAATGTACGTAAGGTGTTCGACAAAACGCGTAAGAGAACTATATTTGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCATGGAAAAGACGTACTGGAATTGTATGCCCAGATGAATATGATGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCCTGTGCTGCTTCAGAGTGTTTGGTTTCATTTCTCCAGAAGGGTAAGGAAATTCATGCGCATATCTTGAGACATGGGTATGAAGCTCATGTTCATGCAATGACTACTCTGGTGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCAGGTGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCGTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATACCGTGCCGAATTCCGTGACGATGGTCAGCGTACTCCAATCCTGTGCTGCTCTTTCTGCTCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAGTTAGGCCAACTAGTTTTTGACTTTATGCATAAGAGAGATGTTGTCATATGGAATTCCTTGATTTCGAGTTATGGAGTACACGGATATGGAAGAAAAGCAATCGAAATTTTCGAAGAGATGGTTGATCATGGAGTCTCACCCAGTTACATATCATTTGTAAGTGTTTTAGGTGCTTGCAGCCATGCCGGGCTTGTTGAAGAGGGGAAGGAGTTGTTTGAATCCATGGCAAAGAAACATGGTATACAGCCTGGTGAGGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCGAATCGATTGGACGAAGCAGCCAAGATTGTAGAGGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGCTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTCGAGCTAGCTGAACGAGCAAGCAAAAGGCTTTTCGAGCTCGAACCTACGAATGCCGGGAATTATGTACTCCTAGCCGATGTTTATGCAGAAGCTAACATGTGGGATGAGGTAAAGAGAGTTAGAAAACTACTTGATTCCCGCGAACTACGAAAGGTCCCGGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTTATCCACAGGCAGAGCAGCTCCATGCCCTGTTAATGAATTTGTCAAATGAGATGAAGCAAAGAGGGTATACCCCACATACTAAAGTGGTGCTGTATGATCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAGCTCGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATATCTAAGAACTTGAGGTTATGTGAAGACTGCCATTCTTTCACAAAATTCATTTCGAAGTTTGCTGATATCGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGACGGAGTTTGCTCGTGTGGAGATTATTGGTAG

mRNA sequence

ATGTGGGCGCTTCGGACCCCCCAATATACCCAATACCCACCTTTGTCCCGCCGCCATTCTTCCGCTCATTCCCCTTCAAAACCCTCAATCTGCTCCGTCTCCTTAAACTCTTCAACCGCTGCAAATTCCAATAAAAATCAGTTGATTCAATCGCTGTGCAAACAGGGCAATCTAAAACAAGCCCTTTTGCTCCTCTCCCATGAATCCAATCCTACCCAACGGACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCCTTGACGTCCATCGACGCCTCGTCGATGGGGGATTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGAATCTGTTGACAATGTACGTAAGGTGTTCGACAAAACGCGTAAGAGAACTATATTTGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCATGGAAAAGACGTACTGGAATTGTATGCCCAGATGAATATGATGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCCTGTGCTGCTTCAGAGTGTTTGGTTTCATTTCTCCAGAAGGGTAAGGAAATTCATGCGCATATCTTGAGACATGGGTATGAAGCTCATGTTCATGCAATGACTACTCTGGTGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCAGGTGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCGTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATACCGTGCCGAATTCCGTGACGATGGTCAGCGTACTCCAATCCTGTGCTGCTCTTTCTGCTCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAGTTAGGCCAACTAGTTTTTGACTTTATGCATAAGAGAGATGTTGTCATATGGAATTCCTTGATTTCGAGTTATGGAGTACACGGATATGGAAGAAAAGCAATCGAAATTTTCGAAGAGATGGTTGATCATGGAGTCTCACCCAGTTACATATCATTTGTAAGTGTTTTAGGTGCTTGCAGCCATGCCGGGCTTGTTGAAGAGGGGAAGGAGTTGTTTGAATCCATGGCAAAGAAACATGGTATACAGCCTGGTGAGGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCGAATCGATTGGACGAAGCAGCCAAGATTGTAGAGGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGCTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTCGAGCTAGCTGAACGAGCAAGCAAAAGGCTTTTCGAGCTCGAACCTACGAATGCCGGGAATTATGTACTCCTAGCCGATGTTTATGCAGAAGCTAACATGTGGGATGAGGTAAAGAGAGTTAGAAAACTACTTGATTCCCGCGAACTACGAAAGGTCCCGGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTTATCCACAGGCAGAGCAGCTCCATGCCCTGTTAATGAATTTGTCAAATGAGATGAAGCAAAGAGGGTATACCCCACATACTAAAGTGGTGCTGTATGATCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAGCTCGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATATCTAAGAACTTGAGGTTATGTGAAGACTGCCATTCTTTCACAAAATTCATTTCGAAGTTTGCTGATATCGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGACGGAGTTTGCTCGTGTGGAGATTATTGGTAG

Coding sequence (CDS)

ATGTGGGCGCTTCGGACCCCCCAATATACCCAATACCCACCTTTGTCCCGCCGCCATTCTTCCGCTCATTCCCCTTCAAAACCCTCAATCTGCTCCGTCTCCTTAAACTCTTCAACCGCTGCAAATTCCAATAAAAATCAGTTGATTCAATCGCTGTGCAAACAGGGCAATCTAAAACAAGCCCTTTTGCTCCTCTCCCATGAATCCAATCCTACCCAACGGACGTGGGAGCTTTTAATCCTCTCCGCCGCTCGCCGGAACTCTCTTTCCGATGGCCTTGACGTCCATCGACGCCTCGTCGATGGGGGATTTGACCAAGATCCTTTCCTGGCCACCAAGCTTATCAATATGTTTTCCGAATTGGAATCTGTTGACAATGTACGTAAGGTGTTCGACAAAACGCGTAAGAGAACTATATTTGTTTGGAATGCGTTGTTTAGAGCTCTTGCGTTGGCGGGTCATGGAAAAGACGTACTGGAATTGTATGCCCAGATGAATATGATGGGAGTTCCTTCTGATAGGTTTACTTATACTTATTTGCTCAAAGCCTGTGCTGCTTCAGAGTGTTTGGTTTCATTTCTCCAGAAGGGTAAGGAAATTCATGCGCATATCTTGAGACATGGGTATGAAGCTCATGTTCATGCAATGACTACTCTGGTGGATATGTACGCAAGGTTTGGGTGTGTTTCTTATGCAGGTGCTGTGTTTGATGAAATGCCTGTGAGAAATGTGGTTTCTTGGAGTGCTATGATTGCGTGCTATGCAAAGAATGGGAAGCCATACGAAGCTTTGGAACTCTTTCGTGAGATGATGCTCAATACCCACGATACCGTGCCGAATTCCGTGACGATGGTCAGCGTACTCCAATCCTGTGCTGCTCTTTCTGCTCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAGTTAGGCCAACTAGTTTTTGACTTTATGCATAAGAGAGATGTTGTCATATGGAATTCCTTGATTTCGAGTTATGGAGTACACGGATATGGAAGAAAAGCAATCGAAATTTTCGAAGAGATGGTTGATCATGGAGTCTCACCCAGTTACATATCATTTGTAAGTGTTTTAGGTGCTTGCAGCCATGCCGGGCTTGTTGAAGAGGGGAAGGAGTTGTTTGAATCCATGGCAAAGAAACATGGTATACAGCCTGGTGAGGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCGAATCGATTGGACGAAGCAGCCAAGATTGTAGAGGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGCTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTCGAGCTAGCTGAACGAGCAAGCAAAAGGCTTTTCGAGCTCGAACCTACGAATGCCGGGAATTATGTACTCCTAGCCGATGTTTATGCAGAAGCTAACATGTGGGATGAGGTAAAGAGAGTTAGAAAACTACTTGATTCCCGCGAACTACGAAAGGTCCCGGGTAGAAGTTGGATCGAAGTACGAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTTATCCACAGGCAGAGCAGCTCCATGCCCTGTTAATGAATTTGTCAAATGAGATGAAGCAAAGAGGGTATACCCCACATACTAAAGTGGTGCTGTATGATCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGCGAAAAGCTCGCAGTTGCTTTTGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATATCTAAGAACTTGAGGTTATGTGAAGACTGCCATTCTTTCACAAAATTCATTTCGAAGTTTGCTGATATCGAGATTATGGTTCGAGATGTGAATCGCTTCCACCATTTCAAGGACGGAGTTTGCTCGTGTGGAGATTATTGGTAG

Protein sequence

MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Homology
[Close]
BLAST of Carg20637 vs. NCBI nr
Match: XP_022964690.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita moschata] >KAG7019172.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1318.5 bits (3411), Expect = 0.0e+00
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. NCBI nr
Match: XP_023519971.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1316.6 bits (3406), Expect = 0.0e+00
Identity = 652/653 (99.85%), Postives = 653/653 (100.00%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMW+EVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWNEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. NCBI nr
Match: XP_023521048.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521050.1 pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 651/653 (99.69%), Postives = 652/653 (99.85%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           A LLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  AFLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTT+VDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTMVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. NCBI nr
Match: XP_023521049.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1314.3 bits (3400), Expect = 0.0e+00
Identity = 650/653 (99.54%), Postives = 652/653 (99.85%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           A LLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  AFLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTT+VDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTMVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMW+EVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWNEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. NCBI nr
Match: XP_022970522.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 641/653 (98.16%), Postives = 646/653 (98.93%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICS S NSSTA NSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSFSFNSSTATNSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVF KTR+RTI+VWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFYKTRERTIYVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVS LQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSILQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAAL+ALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDF+HKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFIHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIF+EMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFQEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMWDEVKRVRKLLDS ELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSCELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNR HHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRIHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 1.0e-279
Identity = 479/658 (72.80%), Postives = 548/658 (83.28%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLN-----SSTAANSNKNQLIQSLCKQ 60
           M+    PQ  Q P     +    SP KP  CSV+LN     S   A  + NQLIQSLCK+
Sbjct: 1   MFLSHPPQVIQ-PTYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKE 60

Query: 61  GNLKQALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLI 120
           G LKQA+ +LS ES+P+Q+T+ELLIL    R+SLSD L VHR ++D G DQDPFLATKLI
Sbjct: 61  GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLI 120

Query: 121 NMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRF 180
            M+S+L SVD  RKVFDKTRKRTI+VWNALFRAL LAGHG++VL LY +MN +GV SDRF
Sbjct: 121 GMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRF 180

Query: 181 TYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAV 240
           TYTY+LKAC ASEC V+ L KGKEIHAH+ R GY +HV+ MTTLVDMYARFGCV YA  V
Sbjct: 181 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 240

Query: 241 FDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALS 300
           F  MPVRNVVSWSAMIACYAKNGK +EAL  FREMM  T D+ PNSVTMVSVLQ+CA+L+
Sbjct: 241 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 300

Query: 301 ALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLIS 360
           ALEQGKLIH YILRRGLDSILPVISALVTMY RCGKLE+GQ VFD MH RDVV WNSLIS
Sbjct: 301 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 360

Query: 361 SYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQ 420
           SYGVHGYG+KAI+IFEEM+ +G SP+ ++FVSVLGACSH GLVEEGK LFE+M + HGI+
Sbjct: 361 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 420

Query: 421 PGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKR 480
           P  EHYACMVDLLGRANRLDEAAK+V+D+R EPGPKVWGSLLG+CRIH +VELAERAS+R
Sbjct: 421 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 480

Query: 481 LFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTS 540
           LF LEP NAGNYVLLAD+YAEA MWDEVKRV+KLL+ R L+K+PGR W+EVRRK+YSF S
Sbjct: 481 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVS 540

Query: 541 VDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGL 600
           VDEF P  EQ+HA L+ L+ +MK++GY P TK VLY+L+ EEKERIVLGHSEKLA+AFGL
Sbjct: 541 VDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGL 600

Query: 601 INTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           INTSKG+ IRI+KNLRLCEDCH FTKFISKF + EI+VRDVNRFH FK+GVCSCGDYW
Sbjct: 601 INTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 2.4e-132
Identity = 240/614 (39.09%), Postives = 385/614 (62.70%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLSH----ESNPTQRTWELLILSAARRNSLSDGLDVHRRLVD 105
           N +I+   +  + + ALL+ S+      +P   T+  L+ + +  + L  G  VH ++  
Sbjct: 88  NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147

Query: 106 GGFDQDPFLATKLINMFSELESVDNVRKVFD--KTRKRTIFVWNALFRALALAGHGKDVL 165
            GFD D F+   LI ++++   + + R VF+     +RTI  W A+  A A  G   + L
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207

Query: 166 ELYAQMNMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTL 225
           E+++QM  M V  D   +  L+    A  CL   L++G+ IHA +++ G E     + +L
Sbjct: 208 EIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLEIEPDLLISL 267

Query: 226 VDMYARFGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVP 285
             MYA+ G V+ A  +FD+M   N++ W+AMI+ YAKNG   EA+++F EM+    D  P
Sbjct: 268 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI--NKDVRP 327

Query: 286 NSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVF 345
           +++++ S + +CA + +LEQ + ++ Y+ R      + + SAL+ M+A+CG +E  +LVF
Sbjct: 328 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 387

Query: 346 DFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVE 405
           D    RDVV+W+++I  YG+HG  R+AI ++  M   GV P+ ++F+ +L AC+H+G+V 
Sbjct: 388 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 447

Query: 406 EGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGA 465
           EG   F  MA  H I P ++HYAC++DLLGRA  LD+A ++++ + ++PG  VWG+LL A
Sbjct: 448 EGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 507

Query: 466 CRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVP 525
           C+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V  VR  +  + L K  
Sbjct: 508 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 567

Query: 526 GRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKE 585
           G SW+EVR ++ +F   D+ +P+ E++   +  + + +K+ G+  +    L+DL++EE E
Sbjct: 568 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 627

Query: 586 RIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRF 645
             +  HSE++A+A+GLI+T +G  +RI+KNLR C +CH+ TK ISK  D EI+VRD NRF
Sbjct: 628 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 687

Query: 646 HHFKDGVCSCGDYW 654
           HHFKDGVCSCGDYW
Sbjct: 688 HHFKDGVCSCGDYW 694

[Close]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 2.4e-132
Identity = 236/610 (38.69%), Postives = 375/610 (61.48%), Query Frame = 0 

Query: 49  IQSLCKQGNLKQALL---LLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFD 108
           I  LC  G L++ALL   +L  E       ++ L+ +   + +L DG  VH  ++   + 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMG--FHGYDALLNACLDKRALRDGQRVHAHMIKTRYL 86

Query: 109 QDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQM 168
              +L T+L+  + + + +++ RKV D+  ++ +  W A+    +  GH  + L ++A+M
Sbjct: 87  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 146

Query: 169 NMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYAR 228
                  + FT+  +L +C  +    S L  GK+IH  I++  Y++H+   ++L+DMYA+
Sbjct: 147 MRSDGKPNEFTFATVLTSCIRA----SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 206

Query: 229 FGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMV 288
            G +  A  +F+ +P R+VVS +A+IA YA+ G   EALE+F    L++    PN VT  
Sbjct: 207 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR--LHSEGMSPNYVTYA 266

Query: 289 SVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKR 348
           S+L + + L+ L+ GK  H ++LRR L     + ++L+ MY++CG L   + +FD M +R
Sbjct: 267 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 326

Query: 349 DVVIWNSLISSYGVHGYGRKAIEIFEEMVDH-GVSPSYISFVSVLGACSHAGLVEEGKEL 408
             + WN+++  Y  HG GR+ +E+F  M D   V P  ++ ++VL  CSH  + + G  +
Sbjct: 327 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 386

Query: 409 FESM-AKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 468
           F+ M A ++G +PG EHY C+VD+LGRA R+DEA + ++ +  +P   V GSLLGACR+H
Sbjct: 387 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 446

Query: 469 CHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSW 528
             V++ E   +RL E+EP NAGNYV+L+++YA A  W +V  VR ++  + + K PGRSW
Sbjct: 447 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 506

Query: 529 IEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVL 588
           I+  + ++ F + D  +P+ E++ A +  +S +MKQ GY P    VLYD+DEE+KE+++L
Sbjct: 507 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 566

Query: 589 GHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFK 648
           GHSEKLA+ FGLI T +G  IR+ KNLR+C DCH+F K  SK  + E+ +RD NRFH   
Sbjct: 567 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 626

Query: 649 DGVCSCGDYW 654
           DG+CSCGDYW
Sbjct: 627 DGICSCGDYW 628

[Close]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 473.0 bits (1216), Expect = 5.4e-132
Identity = 245/624 (39.26%), Postives = 382/624 (61.22%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLS----HESNPTQRTWELLILSAARRNSLSDGLDVHR-RLV 105
           N ++ SLC+   L +AL  L         P + T   ++ + +    L  G ++H   L 
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 106 DGGFDQDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLE 165
           +G  D++ F+ + L++M+   + V + R+VFD    R I +WNA+    +   H K+ L 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 166 LYAQM-NMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTL 225
           L+  M    G+ ++  T   ++ AC  S        + + IH  +++ G +       TL
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRS----GAFSRKEAIHGFVVKRGLDRDRFVQNTL 450

Query: 226 VDMYARFGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMM-------- 285
           +DMY+R G +  A  +F +M  R++V+W+ MI  Y  +    +AL L  +M         
Sbjct: 451 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 510

Query: 286 -LNTHDTVPNSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCG 345
             +     PNS+T++++L SCAALSAL +GK IHAY ++  L + + V SALV MYA+CG
Sbjct: 511 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 570

Query: 346 KLELGQLVFDFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLG 405
            L++ + VFD + +++V+ WN +I +YG+HG G++AI++   M+  GV P+ ++F+SV  
Sbjct: 571 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 630

Query: 406 ACSHAGLVEEGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDL-RIEPG 465
           ACSH+G+V+EG  +F  M   +G++P  +HYAC+VDLLGRA R+ EA +++  + R    
Sbjct: 631 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 690

Query: 466 PKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKL 525
              W SLLGA RIH ++E+ E A++ L +LEP  A +YVLLA++Y+ A +WD+   VR+ 
Sbjct: 691 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 750

Query: 526 LDSRELRKVPGRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVV 585
           +  + +RK PG SWIE   +++ F + D  +PQ+E+L   L  L   M++ GY P T  V
Sbjct: 751 MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 810

Query: 586 LYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADI 645
           L++++E+EKE ++ GHSEKLA+AFG++NTS G  IR++KNLR+C DCH  TKFISK  D 
Sbjct: 811 LHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDR 870

Query: 646 EIMVRDVNRFHHFKDGVCSCGDYW 654
           EI++RDV RFH FK+G CSCGDYW
Sbjct: 871 EIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.1e-131
Identity = 240/616 (38.96%), Postives = 378/616 (61.36%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLSHESN----PTQRTWELLILSAARRNSLSDGLDVHRRLVD 105
           N +I  L + G+  +ALL  S        PT+ ++   I + +    +  G   H++   
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 106 GGFDQDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLEL 165
            G+  D F+++ LI M+S    +++ RKVFD+  KR I  W ++ R   L G+  D + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 166 YAQMNMMGVPSDRFTYTYLLKACAASECLVSFLQKG--KEIHAHILRHGYEAHVHAMTTL 225
           +  + +     D   +   +   +          KG  + IH+ +++ G++  V    TL
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 226 VDMYAR--FGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDT 285
           +D YA+   G V+ A  +FD++  ++ VS++++++ YA++G   EA E+FR ++ N   T
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 286 VPNSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQL 345
             N++T+ +VL + +   AL  GK IH  ++R GL+  + V ++++ MY +CG++E  + 
Sbjct: 285 F-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 344

Query: 346 VFDFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGL 405
            FD M  ++V  W ++I+ YG+HG+  KA+E+F  M+D GV P+YI+FVSVL ACSHAGL
Sbjct: 345 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 404

Query: 406 VEEGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLL 465
             EG   F +M  + G++PG EHY CMVDLLGRA  L +A  +++ ++++P   +W SLL
Sbjct: 405 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 464

Query: 466 GACRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRK 525
            ACRIH +VELAE +  RLFEL+ +N G Y+LL+ +YA+A  W +V+RVR ++ +R L K
Sbjct: 465 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 524

Query: 526 VPGRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEE 585
            PG S +E+  +++ F   DE +PQ E+++  L  L+ ++ + GY  +T  V +D+DEEE
Sbjct: 525 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEE 584

Query: 586 KERIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVN 645
           KE  +  HSEKLA+AFG++NT  G T+ + KNLR+C DCH+  K ISK  D E +VRD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 646 RFHHFKDGVCSCGDYW 654
           RFHHFKDG CSCGDYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

[Close]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match: A0A6J1HLJ1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464697 PE=3 SV=1)

HSP 1 Score: 1318.5 bits (3411), Expect = 0.0e+00
Identity = 653/653 (100.00%), Postives = 653/653 (100.00%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match: A0A6J1HZC4 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469475 PE=3 SV=1)

HSP 1 Score: 1295.8 bits (3352), Expect = 0.0e+00
Identity = 641/653 (98.16%), Postives = 646/653 (98.93%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQYTQYPPLSRRHSSAHSPSKPSICS S NSSTA NSNKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSFSFNSSTATNSNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           LESVDNVRKVF KTR+RTI+VWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL
Sbjct: 121 LESVDNVRKVFYKTRERTIYVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKACAASECLVS LQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP
Sbjct: 181 LKACAASECLVSILQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAAL+ALEQG
Sbjct: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDF+HKRDVVIWNSLISSYGVH
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFIHKRDVVIWNSLISSYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIF+EMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH
Sbjct: 361 GYGRKAIEIFQEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLADVYAEANMWDEVKRVRKLLDS ELRKVPGRSWIEVRRKIYSFTSVDEFY
Sbjct: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSCELRKVPGRSWIEVRRKIYSFTSVDEFY 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNR HHFKDGVCSCGDYW
Sbjct: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRIHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match: A0A6J1CLW0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012148 PE=3 SV=1)

HSP 1 Score: 1207.2 bits (3122), Expect = 0.0e+00
Identity = 593/653 (90.81%), Postives = 619/653 (94.79%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTPQ T YPP SRRH SAHS S+PS+CS++LN S AAN NKNQLIQSLCKQGNLKQ
Sbjct: 1   MWALRTPQSTPYPPSSRRHCSAHSTSRPSVCSLALNPSIAANPNKNQLIQSLCKQGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           ALLLLSHESNPTQ+T ELLILSAARRNSLSDGLDVHR LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALLLLSHESNPTQQTCELLILSAARRNSLSDGLDVHRHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           L+SVD+ RKVFDKTR RTI+VWNALFRALALAGHGK+VLELYA+MNM GVPSDRFTYTYL
Sbjct: 121 LDSVDDARKVFDKTRNRTIYVWNALFRALALAGHGKEVLELYARMNMTGVPSDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKAC ASECLVS L+KGKEIHAHILRHGYEAHVH MTTLVDMYARFGCVSYA AVFDEMP
Sbjct: 181 LKACVASECLVSLLRKGKEIHAHILRHGYEAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           VRNVVSWSA+IACYAKNGKPYEALELF EMMLNTHD+VPNSVTMVSVLQ+CAAL+ALEQG
Sbjct: 241 VRNVVSWSAIIACYAKNGKPYEALELFCEMMLNTHDSVPNSVTMVSVLQACAALAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIH YILRRGLDSILPVISALVTMYARCGKLELGQLVFD MHKRDVV+WNSLIS YGVH
Sbjct: 301 KLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRDVVLWNSLISGYGVH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEM+DHG SPSYISFVSVLGACSHAGLVEEGKELFESM K+HGI P  EH
Sbjct: 361 GYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKELFESMVKEHGIHPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKIVED+R+EPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLAD+YAEA MWD+VKRV+KLLDSREL+KVPGRSWIEVRRKIYSFTSVDEF 
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALL+NLS EMKQRGY P TKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRI+KNLRLCEDCHS TKFISKFAD EIMVRDVNRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match: A0A5A7VHC3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00960 PE=3 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 582/653 (89.13%), Postives = 619/653 (94.79%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTP  TQYPP SRRHSSAHS SK S+CS SLN ST+ANSNK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQ+T ELLILSAARR SLSD LDVH+ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSAARRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           L+SVDN RKVFDKTRKRTI+VWNALFRALALAGHG DVLELY +M+MMGVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKAC AS+CLVSFLQKGKEIHAHILRHGY AHVH MTTLVDMYARFGCVSYA AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQ+CAA +ALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FD +HK+DV++WNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEM+D+G+SPSYISFVSVLGACSHAGLVEEGK+LFESM K+HGIQP  EH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLAD+YAEA MWDEVKRVRKLL+SREL+KVPGRSWIEVRRKIYSFTSVDEF 
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALL+NLSNEMKQRGY P TK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRI+KNLRLCEDCHS TKFISKFAD EIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match: A0A5D3BEB8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001880 PE=3 SV=1)

HSP 1 Score: 1192.9 bits (3085), Expect = 0.0e+00
Identity = 581/653 (88.97%), Postives = 619/653 (94.79%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLNSSTAANSNKNQLIQSLCKQGNLKQ 60
           MWALRTP  TQYPP SRRHSSAHS SK S+CS SLN ST+ANSNK+QLIQSLCK+GNLKQ
Sbjct: 1   MWALRTPHSTQYPPSSRRHSSAHSTSKLSVCSFSLNPSTSANSNKDQLIQSLCKEGNLKQ 60

Query: 61  ALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLINMFSE 120
           AL+LLSHE NPTQ+T ELLILSA+RR SLSD LDVH+ LVDGGFDQDPFLATKLINMFSE
Sbjct: 61  ALVLLSHEPNPTQQTCELLILSASRRKSLSDALDVHQHLVDGGFDQDPFLATKLINMFSE 120

Query: 121 LESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRFTYTYL 180
           L+SVDN RKVFDKTRKRTI+VWNALFRALALAGHG DVLELY +M+MMGVP DRFTYTYL
Sbjct: 121 LDSVDNARKVFDKTRKRTIYVWNALFRALALAGHGNDVLELYPRMDMMGVPCDRFTYTYL 180

Query: 181 LKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAVFDEMP 240
           LKAC AS+CLVSFLQKGKEIHAHILRHGY AHVH MTTLVDMYARFGCVSYA AVFDEMP
Sbjct: 181 LKACVASDCLVSFLQKGKEIHAHILRHGYGAHVHVMTTLVDMYARFGCVSYASAVFDEMP 240

Query: 241 VRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALSALEQG 300
           V+NVVSWSAMIACYAKNGKPYEALELFR+MMLNTHD VPNSVTMVSVLQ+CAA +ALEQG
Sbjct: 241 VKNVVSWSAMIACYAKNGKPYEALELFRDMMLNTHDLVPNSVTMVSVLQACAAFAALEQG 300

Query: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLISSYGVH 360
           KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FD +HK+DV++WNSL SSYG+H
Sbjct: 301 KLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIHKKDVILWNSLFSSYGLH 360

Query: 361 GYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQPGEEH 420
           GYGRKAIEIFEEM+D+G+SPSYISFVSVLGACSHAGLVEEGK+LFESM K+HGIQP  EH
Sbjct: 361 GYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKKLFESMVKEHGIQPSVEH 420

Query: 421 YACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480
           YACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE
Sbjct: 421 YACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELE 480

Query: 481 PTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTSVDEFY 540
           PTNAGNYVLLAD+YAEA MWDEVKRVRKLL+SREL+KVPGRSWIEVRRKIYSFTSVDEF 
Sbjct: 481 PTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSWIEVRRKIYSFTSVDEFN 540

Query: 541 PQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSK 600
           PQ EQLHALL+NLSNEMKQRGY P TK+VLYDLD+EEKERIVLGHSEKLAVAFGLINTSK
Sbjct: 541 PQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSK 600

Query: 601 GDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           GDTIRI+KNLRLCEDCHS TKFISKFAD EIMVRD+NRFHHFKDGVCSCGDYW
Sbjct: 601 GDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 653

[Close]
BLAST of Carg20637 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 963.8 bits (2490), Expect = 7.2e-281
Identity = 479/658 (72.80%), Postives = 548/658 (83.28%), Query Frame = 0 

Query: 1   MWALRTPQYTQYPPLSRRHSSAHSPSKPSICSVSLN-----SSTAANSNKNQLIQSLCKQ 60
           M+    PQ  Q P     +    SP KP  CSV+LN     S   A  + NQLIQSLCK+
Sbjct: 1   MFLSHPPQVIQ-PTYHTVNFLPRSPLKPPSCSVALNNPSISSGAGAKISNNQLIQSLCKE 60

Query: 61  GNLKQALLLLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFDQDPFLATKLI 120
           G LKQA+ +LS ES+P+Q+T+ELLIL    R+SLSD L VHR ++D G DQDPFLATKLI
Sbjct: 61  GKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLI 120

Query: 121 NMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQMNMMGVPSDRF 180
            M+S+L SVD  RKVFDKTRKRTI+VWNALFRAL LAGHG++VL LY +MN +GV SDRF
Sbjct: 121 GMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRF 180

Query: 181 TYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYARFGCVSYAGAV 240
           TYTY+LKAC ASEC V+ L KGKEIHAH+ R GY +HV+ MTTLVDMYARFGCV YA  V
Sbjct: 181 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 240

Query: 241 FDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMVSVLQSCAALS 300
           F  MPVRNVVSWSAMIACYAKNGK +EAL  FREMM  T D+ PNSVTMVSVLQ+CA+L+
Sbjct: 241 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 300

Query: 301 ALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKRDVVIWNSLIS 360
           ALEQGKLIH YILRRGLDSILPVISALVTMY RCGKLE+GQ VFD MH RDVV WNSLIS
Sbjct: 301 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 360

Query: 361 SYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMAKKHGIQ 420
           SYGVHGYG+KAI+IFEEM+ +G SP+ ++FVSVLGACSH GLVEEGK LFE+M + HGI+
Sbjct: 361 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 420

Query: 421 PGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKR 480
           P  EHYACMVDLLGRANRLDEAAK+V+D+R EPGPKVWGSLLG+CRIH +VELAERAS+R
Sbjct: 421 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 480

Query: 481 LFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSWIEVRRKIYSFTS 540
           LF LEP NAGNYVLLAD+YAEA MWDEVKRV+KLL+ R L+K+PGR W+EVRRK+YSF S
Sbjct: 481 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVS 540

Query: 541 VDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVLGHSEKLAVAFGL 600
           VDEF P  EQ+HA L+ L+ +MK++GY P TK VLY+L+ EEKERIVLGHSEKLA+AFGL
Sbjct: 541 VDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGL 600

Query: 601 INTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFKDGVCSCGDYW 654
           INTSKG+ IRI+KNLRLCEDCH FTKFISKF + EI+VRDVNRFH FK+GVCSCGDYW
Sbjct: 601 INTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657

[Close]
BLAST of Carg20637 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 474.2 bits (1219), Expect = 1.7e-133
Identity = 236/610 (38.69%), Postives = 375/610 (61.48%), Query Frame = 0 

Query: 49  IQSLCKQGNLKQALL---LLSHESNPTQRTWELLILSAARRNSLSDGLDVHRRLVDGGFD 108
           I  LC  G L++ALL   +L  E       ++ L+ +   + +L DG  VH  ++   + 
Sbjct: 27  ISQLCSNGRLQEALLEMAMLGPEMG--FHGYDALLNACLDKRALRDGQRVHAHMIKTRYL 86

Query: 109 QDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLELYAQM 168
              +L T+L+  + + + +++ RKV D+  ++ +  W A+    +  GH  + L ++A+M
Sbjct: 87  PATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEM 146

Query: 169 NMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTLVDMYAR 228
                  + FT+  +L +C  +    S L  GK+IH  I++  Y++H+   ++L+DMYA+
Sbjct: 147 MRSDGKPNEFTFATVLTSCIRA----SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 206

Query: 229 FGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVPNSVTMV 288
            G +  A  +F+ +P R+VVS +A+IA YA+ G   EALE+F    L++    PN VT  
Sbjct: 207 AGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR--LHSEGMSPNYVTYA 266

Query: 289 SVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDFMHKR 348
           S+L + + L+ L+ GK  H ++LRR L     + ++L+ MY++CG L   + +FD M +R
Sbjct: 267 SLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 326

Query: 349 DVVIWNSLISSYGVHGYGRKAIEIFEEMVDH-GVSPSYISFVSVLGACSHAGLVEEGKEL 408
             + WN+++  Y  HG GR+ +E+F  M D   V P  ++ ++VL  CSH  + + G  +
Sbjct: 327 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 386

Query: 409 FESM-AKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 468
           F+ M A ++G +PG EHY C+VD+LGRA R+DEA + ++ +  +P   V GSLLGACR+H
Sbjct: 387 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 446

Query: 469 CHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVPGRSW 528
             V++ E   +RL E+EP NAGNYV+L+++YA A  W +V  VR ++  + + K PGRSW
Sbjct: 447 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 506

Query: 529 IEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKERIVL 588
           I+  + ++ F + D  +P+ E++ A +  +S +MKQ GY P    VLYD+DEE+KE+++L
Sbjct: 507 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 566

Query: 589 GHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRFHHFK 648
           GHSEKLA+ FGLI T +G  IR+ KNLR+C DCH+F K  SK  + E+ +RD NRFH   
Sbjct: 567 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 626

Query: 649 DGVCSCGDYW 654
           DG+CSCGDYW
Sbjct: 627 DGICSCGDYW 628

[Close]
BLAST of Carg20637 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 474.2 bits (1219), Expect = 1.7e-133
Identity = 240/614 (39.09%), Postives = 385/614 (62.70%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLSH----ESNPTQRTWELLILSAARRNSLSDGLDVHRRLVD 105
           N +I+   +  + + ALL+ S+      +P   T+  L+ + +  + L  G  VH ++  
Sbjct: 88  NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147

Query: 106 GGFDQDPFLATKLINMFSELESVDNVRKVFD--KTRKRTIFVWNALFRALALAGHGKDVL 165
            GFD D F+   LI ++++   + + R VF+     +RTI  W A+  A A  G   + L
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207

Query: 166 ELYAQMNMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTL 225
           E+++QM  M V  D   +  L+    A  CL   L++G+ IHA +++ G E     + +L
Sbjct: 208 EIFSQMRKMDVKPD---WVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLEIEPDLLISL 267

Query: 226 VDMYARFGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDTVP 285
             MYA+ G V+ A  +FD+M   N++ W+AMI+ YAKNG   EA+++F EM+    D  P
Sbjct: 268 NTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMI--NKDVRP 327

Query: 286 NSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVF 345
           +++++ S + +CA + +LEQ + ++ Y+ R      + + SAL+ M+A+CG +E  +LVF
Sbjct: 328 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 387

Query: 346 DFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGLVE 405
           D    RDVV+W+++I  YG+HG  R+AI ++  M   GV P+ ++F+ +L AC+H+G+V 
Sbjct: 388 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 447

Query: 406 EGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGA 465
           EG   F  MA  H I P ++HYAC++DLLGRA  LD+A ++++ + ++PG  VWG+LL A
Sbjct: 448 EGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 507

Query: 466 CRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRKVP 525
           C+ H HVEL E A+++LF ++P+N G+YV L+++YA A +WD V  VR  +  + L K  
Sbjct: 508 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 567

Query: 526 GRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEEKE 585
           G SW+EVR ++ +F   D+ +P+ E++   +  + + +K+ G+  +    L+DL++EE E
Sbjct: 568 GCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAE 627

Query: 586 RIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVNRF 645
             +  HSE++A+A+GLI+T +G  +RI+KNLR C +CH+ TK ISK  D EI+VRD NRF
Sbjct: 628 ETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRF 687

Query: 646 HHFKDGVCSCGDYW 654
           HHFKDGVCSCGDYW
Sbjct: 688 HHFKDGVCSCGDYW 694

[Close]
BLAST of Carg20637 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 473.0 bits (1216), Expect = 3.8e-133
Identity = 245/624 (39.26%), Postives = 382/624 (61.22%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLS----HESNPTQRTWELLILSAARRNSLSDGLDVHR-RLV 105
           N ++ SLC+   L +AL  L         P + T   ++ + +    L  G ++H   L 
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 106 DGGFDQDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLE 165
           +G  D++ F+ + L++M+   + V + R+VFD    R I +WNA+    +   H K+ L 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 166 LYAQM-NMMGVPSDRFTYTYLLKACAASECLVSFLQKGKEIHAHILRHGYEAHVHAMTTL 225
           L+  M    G+ ++  T   ++ AC  S        + + IH  +++ G +       TL
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRS----GAFSRKEAIHGFVVKRGLDRDRFVQNTL 450

Query: 226 VDMYARFGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMM-------- 285
           +DMY+R G +  A  +F +M  R++V+W+ MI  Y  +    +AL L  +M         
Sbjct: 451 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 510

Query: 286 -LNTHDTVPNSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCG 345
             +     PNS+T++++L SCAALSAL +GK IHAY ++  L + + V SALV MYA+CG
Sbjct: 511 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 570

Query: 346 KLELGQLVFDFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLG 405
            L++ + VFD + +++V+ WN +I +YG+HG G++AI++   M+  GV P+ ++F+SV  
Sbjct: 571 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 630

Query: 406 ACSHAGLVEEGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDL-RIEPG 465
           ACSH+G+V+EG  +F  M   +G++P  +HYAC+VDLLGRA R+ EA +++  + R    
Sbjct: 631 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 690

Query: 466 PKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKL 525
              W SLLGA RIH ++E+ E A++ L +LEP  A +YVLLA++Y+ A +WD+   VR+ 
Sbjct: 691 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 750

Query: 526 LDSRELRKVPGRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVV 585
           +  + +RK PG SWIE   +++ F + D  +PQ+E+L   L  L   M++ GY P T  V
Sbjct: 751 MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 810

Query: 586 LYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADI 645
           L++++E+EKE ++ GHSEKLA+AFG++NTS G  IR++KNLR+C DCH  TKFISK  D 
Sbjct: 811 LHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDR 870

Query: 646 EIMVRDVNRFHHFKDGVCSCGDYW 654
           EI++RDV RFH FK+G CSCGDYW
Sbjct: 871 EIILRDVRRFHRFKNGTCSCGDYW 890

[Close]
BLAST of Carg20637 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 471.1 bits (1211), Expect = 1.5e-132
Identity = 240/616 (38.96%), Postives = 378/616 (61.36%), Query Frame = 0 

Query: 46  NQLIQSLCKQGNLKQALLLLSHESN----PTQRTWELLILSAARRNSLSDGLDVHRRLVD 105
           N +I  L + G+  +ALL  S        PT+ ++   I + +    +  G   H++   
Sbjct: 45  NSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV 104

Query: 106 GGFDQDPFLATKLINMFSELESVDNVRKVFDKTRKRTIFVWNALFRALALAGHGKDVLEL 165
            G+  D F+++ LI M+S    +++ RKVFD+  KR I  W ++ R   L G+  D + L
Sbjct: 105 FGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSL 164

Query: 166 YAQMNMMGVPSDRFTYTYLLKACAASECLVSFLQKG--KEIHAHILRHGYEAHVHAMTTL 225
           +  + +     D   +   +   +          KG  + IH+ +++ G++  V    TL
Sbjct: 165 FKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTL 224

Query: 226 VDMYAR--FGCVSYAGAVFDEMPVRNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDT 285
           +D YA+   G V+ A  +FD++  ++ VS++++++ YA++G   EA E+FR ++ N   T
Sbjct: 225 LDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVT 284

Query: 286 VPNSVTMVSVLQSCAALSALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQL 345
             N++T+ +VL + +   AL  GK IH  ++R GL+  + V ++++ MY +CG++E  + 
Sbjct: 285 F-NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 344

Query: 346 VFDFMHKRDVVIWNSLISSYGVHGYGRKAIEIFEEMVDHGVSPSYISFVSVLGACSHAGL 405
            FD M  ++V  W ++I+ YG+HG+  KA+E+F  M+D GV P+YI+FVSVL ACSHAGL
Sbjct: 345 AFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGL 404

Query: 406 VEEGKELFESMAKKHGIQPGEEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLL 465
             EG   F +M  + G++PG EHY CMVDLLGRA  L +A  +++ ++++P   +W SLL
Sbjct: 405 HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLL 464

Query: 466 GACRIHCHVELAERASKRLFELEPTNAGNYVLLADVYAEANMWDEVKRVRKLLDSRELRK 525
            ACRIH +VELAE +  RLFEL+ +N G Y+LL+ +YA+A  W +V+RVR ++ +R L K
Sbjct: 465 AACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVK 524

Query: 526 VPGRSWIEVRRKIYSFTSVDEFYPQAEQLHALLMNLSNEMKQRGYTPHTKVVLYDLDEEE 585
            PG S +E+  +++ F   DE +PQ E+++  L  L+ ++ + GY  +T  V +D+DEEE
Sbjct: 525 PPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEE 584

Query: 586 KERIVLGHSEKLAVAFGLINTSKGDTIRISKNLRLCEDCHSFTKFISKFADIEIMVRDVN 645
           KE  +  HSEKLA+AFG++NT  G T+ + KNLR+C DCH+  K ISK  D E +VRD  
Sbjct: 585 KEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAK 644

Query: 646 RFHHFKDGVCSCGDYW 654
           RFHHFKDG CSCGDYW
Sbjct: 645 RFHHFKDGGCSCGDYW 659

The following BLAST results are available for this feature:
BLAST of Carg20637 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022964690.10.0e+00100.00pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita ... [more]
XP_023519971.10.0e+0099.85pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Cucur... [more]
XP_023521048.10.0e+0099.69pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like isofor... [more]
XP_023521049.10.0e+0099.54pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like isofor... [more]
XP_022970522.10.0e+0098.16pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucurbita ... [more]
BLAST of Carg20637 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STF31.0e-27972.80Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
Q9LTV82.4e-13239.09Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... [more]
Q9LIC32.4e-13238.69Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
Q7Y2115.4e-13239.26Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9LW322.1e-13138.96Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop... [more]
BLAST of Carg20637 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HLJ10.0e+00100.00pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbit... [more]
A0A6J1HZC40.0e+0098.16pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucurbit... [more]
A0A6J1CLW00.0e+0090.81pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordic... [more]
A0A5A7VHC30.0e+0089.13Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5D3BEB80.0e+0088.97Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Carg20637 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G46790.17.2e-28172.80Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G13770.11.7e-13338.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G12770.11.7e-13339.09mitochondrial editing factor 22 [more]
AT3G57430.13.8e-13339.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G26782.11.5e-13238.96Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 42..190
e-value: 7.3E-22
score: 80.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 399..582
e-value: 6.5E-13
score: 50.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 302..398
e-value: 9.2E-20
score: 72.7
coord: 191..301
e-value: 3.4E-21
score: 77.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 51..504
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 384..417
e-value: 2.4E-4
score: 19.0
coord: 245..271
e-value: 4.1E-7
score: 27.8
coord: 348..381
e-value: 1.2E-7
score: 29.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 46..65
e-value: 1.3
score: 9.4
coord: 216..243
e-value: 0.046
score: 14.0
coord: 245..271
e-value: 1.1E-8
score: 34.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 138..185
e-value: 4.3E-8
score: 33.2
coord: 345..392
e-value: 1.5E-9
score: 37.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 381..416
score: 8.867749
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 243..277
score: 10.961357
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 138..172
score: 8.911594
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 346..380
score: 12.561707
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 519..643
e-value: 4.4E-40
score: 136.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 42..642
NoneNo IPR availablePANTHERPTHR24015:SF96OS01G0848300 PROTEINcoord: 42..642

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20637-RACarg20637-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding