Carg20632 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20632
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr13: 559464 .. 559706 (-)
RNA-Seq ExpressionCarg20632
SyntenyCarg20632
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTTTCTCGGGACAGGCGTCTTGGGATTCAAAGGAGAAGGTAAAGAAGATGGTGAAAACACCATAGCTTCGAATCAAATGCAGGTGTTTGTTTCCTATTAAGAGAGTATGCAGTTTGTTGGGAGTACAATTCCAGTTACCCGCCTTATTTATCTAACATTTAAAAATCTCCGCTCACGCTCTCCCCTATTAAACGGGGTTTCCACCTATTCAAAGCGAGTTCTCGACCTTGGAAGATAA

mRNA sequence

ATGGCGTTTCTCGGGACAGGCGTCTTGGGATTCAAAGGAGAAGGTAAAGAAGATGGTGAAAACACCATAGCTTCGAATCAAATGCAGTTTGTTGGGAGTACAATTCCAGTTACCCGCCTTATTTATCTAACATTTAAAAATCTCCGCTCACGCTCTCCCCTATTAAACGGGGTTTCCACCTATTCAAAGCGAGTTCTCGACCTTGGAAGATAA

Coding sequence (CDS)

ATGGCGTTTCTCGGGACAGGCGTCTTGGGATTCAAAGGAGAAGGTAAAGAAGATGGTGAAAACACCATAGCTTCGAATCAAATGCAGTTTGTTGGGAGTACAATTCCAGTTACCCGCCTTATTTATCTAACATTTAAAAATCTCCGCTCACGCTCTCCCCTATTAAACGGGGTTTCCACCTATTCAAAGCGAGTTCTCGACCTTGGAAGATAA

Protein sequence

MAFLGTGVLGFKGEGKEDGENTIASNQMQFVGSTIPVTRLIYLTFKNLRSRSPLLNGVSTYSKRVLDLGR
Homology
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BLAST of Carg20632 vs. NCBI nr
Match: KAG7019167.1 (hypothetical protein SDJN02_18125, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.2 bits (352), Expect = 6.8e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MAFLGTGVLGFKGEGKEDGENTIASNQMQFVGSTIPVTRLIYLTFKNLRSRSPLLNGVST 60
          MAFLGTGVLGFKGEGKEDGENTIASNQMQFVGSTIPVTRLIYLTFKNLRSRSPLLNGVST
Sbjct: 1  MAFLGTGVLGFKGEGKEDGENTIASNQMQFVGSTIPVTRLIYLTFKNLRSRSPLLNGVST 60

Query: 61 YSKRVLDLGR 71
          YSKRVLDLGR
Sbjct: 61 YSKRVLDLGR 70

The following BLAST results are available for this feature:
BLAST of Carg20632 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019167.16.8e-30100.00hypothetical protein SDJN02_18125, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg20632 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20632 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20632 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20632-RACarg20632-RAmRNA