Carg20616 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACTAATAATGGCGGAGCCAAAAATATCTGCCATTTCCTTTCTCCGATTGATTCCATCCACATAAAAACCGATTCGTCTTTCGTTGAGATACGATCGAAAAAGCAGATTCAGAGAATCGACGGCAATGGAGAACGGCAGAAAGCCTGGAAGGAGCGACGGTCGTCTATCAATGGAGGAGGAAAGAGAGATGGAGGCCAAAACTCGAGACTACTTCAATGGCGTCGCACCGAAGCGCCACACCAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGACAAAGTAAATGGCATGGACGATTACATTCCTGAACTCTCTGAGTTTCAGCGCCTCGAATCCGATCCTCTCGAGGTTAGTTTTCGGATCGATTTTCTTGATTAAGCTTTCCGTTAGTGGATCATGTATTCGATCCTCCAACTCTATGAAATGCAGTATACTGATTGTGTTTTTCGAATTTGAAGCTGAATCGGCGGTTCTACGTTGTAGTTACAATTAGGAAAAGAAATGGAATCGAATGTTGATGCGTATATTGCGTTAATTTGTGGAGAAATTGAATTAACTGTGACTAACATGAACGTTTTCATTCTGTCGAATCCTCCATTGTTTTGAAATTTGAGCAGAGACTTGCTTATGATGGCCGTAACGGCAACATCCCTGATGAATTTGTGGAGACGAAGTATTATGACGATCTCAATTGTGTAGACAAACAGCACCACACGGTATTCTCTAGTCCATTGATCATCGATTATGATCTTTGTCTGTATGTGTGTGTGTGTGTTAACGAAGAAGATGAATTTTGCTTTCAGACAGGAACAGGATTCATAAGAACGGAGAATGGAGATTGCAAAAGTTTCAGACTCGAAGTAGATTCTGCTGCCTGCTGCCATGGCTCTTGCAGGGGTAATCCGGCGACCAACGACTGGATTCCGGCCACTAATGATCTGGTAAAATCACCGTAATCCACTTCGACTCATTGTGTTTGCTTGGATATATTCATATGACTGAAGATCTTTTTTCAATGAGTAACGTGTTATTCTTCACAAATTTTACTCATTTGTTAGTAATTTTTTTAGGTTGAACGATCGTTAGTTTAAAATCAAATTGTTTTTCAGAAAAAGAGAACACTTTTAGAACCCAGAAAAATTCAGAACTAAGTTTAAAATCAAATGCATTTTACACAAATGTTTTCTGCCCAGGAAAAACAAAATATATATATATATATATAAAATCATGAAATCCAACTATTTCAAATGATTGAAGTAATTAATAATTGATTTTCAGTTTTAGGGCTATAGAAAATTTTCATTTTTATACTTTGTCTTACGTAGAACATATTTTTTTATATCCATAGTTATCTTAAAGGAATGATCTCAGTATCCTTGAAAGTGCATACACCTAATCTCACTATCCTCCTTTTAATAATCCCCTACAAACGGAACATACAAATCGGTCTAACAATCATCCTTGTGCATCAATTAGCTCATTATTGTAGAACCATATTTGAACTGCCTTCTCAAGCACCATATTCATACATTGTTCTAAGATTACAAGTTTATTCTCAAACTTTGTCGACCTAGTCTATAAACTTTCGAACATTAAGTCTCTGAACTTTCAATTTGTGTATAGTTGATTGACTAAAATTTCTGATAAATATGAAGCTTAATTTATTGGACTGGGATCGTAATTTATCAAAAATTCAGTTAGATTTATATTTGGGGACATTTTATTTGGCAGGCAAACAGGGGTGATTATTAATGAAGAAGAAAAGTGAGTTATTGTAGACATTCTTAAGGAGCTGGATGTTGCATTGAGTAAGTAATCTGCATAATGCTATTATCATTGTTGTTTTGAGCTTCAAAAACAACTGATTATATATATGTAAACTTAAAAAGTTAAGCACTTCTTCTATTCAACTTTTACTGCTTGGACGGTCTGAGTATTAAAGAATACTCTTAAATTTTAAAAGTACTTTCTGTTCATTATCTCTAAATCTTTTAATATTATTCTTAAAAAATTTATTAATATTTTTAA CAAACTAATAATGGCGGAGCCAAAAATATCTGCCATTTCCTTTCTCCGATTGATTCCATCCACATAAAAACCGATTCGTCTTTCGTTGAGATACGATCGAAAAAGCAGATTCAGAGAATCGACGGCAATGGAGAACGGCAGAAAGCCTGGAAGGAGCGACGGTCGTCTATCAATGGAGGAGGAAAGAGAGATGGAGGCCAAAACTCGAGACTACTTCAATGGCGTCGCACCGAAGCGCCACACCAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGACAAAGTAAATGGCATGGACGATTACATTCCTGAACTCTCTGAGTTTCAGCGCCTCGAATCCGATCCTCTCGAGAGACTTGCTTATGATGGCCGTAACGGCAACATCCCTGATGAATTTGTGGAGACGAAGTATTATGACGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAGAACGGAGAATGGAGATTGCAAAAGTTTCAGACTCGAAGTAGATTCTGCTGCCTGCTGCCATGGCTCTTGCAGGGGTAATCCGGCGACCAACGACTGGATTCCGGCCACTAATGATCTGGCAAACAGGGGTGATTATTAATGAAGAAGAAAAGTGAGTTATTGTAGACATTCTTAAGGAGCTGGATGTTGCATTGAGTAAGTAATCTGCATAATGCTATTATCATTGTTGTTTTGAGCTTCAAAAACAACTGATTATATATATGTAAACTTAAAAAGTTAAGCACTTCTTCTATTCAACTTTTACTGCTTGGACGGTCTGAGTATTAAAGAATACTCTTAAATTTTAAAAGTACTTTCTGTTCATTATCTCTAAATCTTTTAATATTATTCTTAAAAAATTTATTAATATTTTTAA ATGGAGAACGGCAGAAAGCCTGGAAGGAGCGACGGTCGTCTATCAATGGAGGAGGAAAGAGAGATGGAGGCCAAAACTCGAGACTACTTCAATGGCGTCGCACCGAAGCGCCACACCAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACGTCGACAAAGTAAATGGCATGGACGATTACATTCCTGAACTCTCTGAGTTTCAGCGCCTCGAATCCGATCCTCTCGAGAGACTTGCTTATGATGGCCGTAACGGCAACATCCCTGATGAATTTGTGGAGACGAAGTATTATGACGATCTCAATTGTGTAGACAAACAGCACCACACGACAGGAACAGGATTCATAAGAACGGAGAATGGAGATTGCAAAAGTTTCAGACTCGAAGTAGATTCTGCTGCCTGCTGCCATGGCTCTTGCAGGGGTAATCCGGCGACCAACGACTGGATTCCGGCCACTAATGATCTGGCAAACAGGGGTGATTATTAA MENGRKPGRSDGRLSMEEEREMEAKTRDYFNGVAPKRHTKPQRSEFSAHYVDKVNGMDDYIPELSEFQRLESDPLERLAYDGRNGNIPDEFVETKYYDDLNCVDKQHHTTGTGFIRTENGDCKSFRLEVDSAACCHGSCRGNPATNDWIPATNDLANRGDY Homology
BLAST of Carg20616 vs. NCBI nr
Match: KAG6583384.1 (hypothetical protein SDJN03_19316, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019151.1 hypothetical protein SDJN02_18109 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 343.6 bits (880), Expect = 9.3e-91 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg20616 vs. NCBI nr
Match: XP_022970575.1 (uncharacterized protein LOC111469511 [Cucurbita maxima]) HSP 1 Score: 340.9 bits (873), Expect = 6.0e-90 Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg20616 vs. NCBI nr
Match: XP_023519044.1 (uncharacterized protein LOC111782513 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340.1 bits (871), Expect = 1.0e-89 Identity = 159/161 (98.76%), Postives = 160/161 (99.38%), Query Frame = 0
BLAST of Carg20616 vs. NCBI nr
Match: XP_022965014.1 (uncharacterized protein LOC111464954 [Cucurbita moschata]) HSP 1 Score: 337.0 bits (863), Expect = 8.7e-89 Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of Carg20616 vs. NCBI nr
Match: XP_038893549.1 (uncharacterized protein LOC120082446 isoform X1 [Benincasa hispida]) HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73 Identity = 134/157 (85.35%), Postives = 140/157 (89.17%), Query Frame = 0
BLAST of Carg20616 vs. ExPASy TrEMBL
Match: A0A6J1I384 (uncharacterized protein LOC111469511 OS=Cucurbita maxima OX=3661 GN=LOC111469511 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 2.9e-90 Identity = 159/161 (98.76%), Postives = 161/161 (100.00%), Query Frame = 0
BLAST of Carg20616 vs. ExPASy TrEMBL
Match: A0A6J1HPU8 (uncharacterized protein LOC111464954 OS=Cucurbita moschata OX=3662 GN=LOC111464954 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.2e-89 Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0
BLAST of Carg20616 vs. ExPASy TrEMBL
Match: A0A5A7SMD8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00400 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.2e-73 Identity = 135/158 (85.44%), Postives = 142/158 (89.87%), Query Frame = 0
BLAST of Carg20616 vs. ExPASy TrEMBL
Match: A0A0A0M0Q2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G528510 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.2e-73 Identity = 134/159 (84.28%), Postives = 142/159 (89.31%), Query Frame = 0
BLAST of Carg20616 vs. ExPASy TrEMBL
Match: A0A1S3C5E6 (uncharacterized protein LOC103497099 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497099 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72 Identity = 134/158 (84.81%), Postives = 142/158 (89.87%), Query Frame = 0
BLAST of Carg20616 vs. TAIR 10
Match: AT4G37300.1 (maternal effect embryo arrest 59 ) HSP 1 Score: 101.3 bits (251), Expect = 7.5e-22 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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