Carg20590 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20590
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	homeobox protein 6
Location	Carg_Chr12: 445220 .. 446395 (-)
RNA-Seq Expression	Carg20590
Synteny	Carg20590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGAAATTGAGGTAGAGAAGAAGACATCATGGGAAGAAGCTGTCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATGAAACCCCGATCAGATCCTCCGCCGCCGTCCAATCGGAGGACTTCGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCATATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCATTCTTTCCTAGAAATTCCTCCACCAGGTCCAAATTTTATACATTATCATTTTTTTTATAATTTCAGCCTATTTTTATTATAATCTAAGATTCTTTCCTCCCTGTCTTGTTCTTGCTTCTCTCCCGACAGGTCGGAGTCTTCGGATATGTTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGGTAAAGCTTTTCAATTTTCACGAGCATAGAAAGATAACATTTTTTATAAGAGTATAGAAATCTAAAAAAAAAATTAAAAAAAAAAAAAATAGAAAAATGGCTTATAATAAATTAGCAAATTCTTAATCCTAACATTACTATGTTGTTCATTGATATTTGAATGATATAAAGTATATTTCATATTTCAGATCATCAAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGATCACACAACAACGTTTTCCACTCTCATCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCCGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAA

mRNA sequence

AATTGAAATTGAGGTAGAGAAGAAGACATCATGGGAAGAAGCTGTCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATGAAACCCCGATCAGATCCTCCGCCGCCGTCCAATCGGAGGACTTCGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCATATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCATTCTTTCCTAGAAATTCCTCCACCAGGTCGGAGTCTTCGGATATGTTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGATCATCAAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGATCACACAACAACGTTTTCCACTCTCATCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCCGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAA

Coding sequence (CDS)

ATGGGAAGAAGCTGTCATGGAGATGAAACATGGGAAGAACAGAACCAAATCCAAGAACAAGAAGACGAAGAAGCTTTATCTTTCTGTGACCTTCCTCTAAAAGAAACGCAGCCGCCTTTGAATCTAAATGAAACCCCGATCAGATCCTCCGCCGCCGTCCAATCGGAGGACTTCGATTTCAACCACTGCCCTCCGCCACTGCCGCAGCCCATGTGCGCCGCCGATGAGGTCTTCTTCCAAGGCCATATCCTCCCTCTTCGTCACTCTTTCAGCTCTGAAAATTCCCACAATAACCCATTCTTTCCTAGAAATTCCTCCACCAGGTCGGAGTCTTCGGATATGTTAAGGTTTAGAAATGGAAGCACCAGCAGCAGTAGCAGTAGAAGCCATTATTCCCGATCATCAAGTATTAGTAATAATTCCATTTCAATTCCGACGAATTCCAAGCCAAGATCACACAACAACGTTTTCCACTCTCATCCTAGTCCGACGCCCCAAATCAGATCCCATTCAACTTCCGGCCGCCGAAGCCGGAGTTCATCCCGGTGGGACTTTTTCCGGCTGGGTCTTCTCCGAACGCCGGGAATGGAACTTCACGACCTCAAAACTCGCACCAACTCCGCCTCGGCCGCCGCCACCCCGGCGGCGCATACAACAGCTGGCTCGTTTCTGGGTGTGGTGAGCTGCAAAAAATCAGTGGATACAGTAGCGGCGGCGGGGAAGAAGAAAAGGAGTGAAAATGGAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAGGGAAACGAGGGTGTCACATCGTCGAACATTTGAATGGGTAAAGCAGCTCTCGCATGCAAGCTCTGGTGACGAACAATAA

Protein sequence

MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDFNHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAGKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ

Homology

[Close]

BLAST of Carg20590 vs. NCBI nr
Match: KAG7020165.1 (hypothetical protein SDJN02_16847 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240
           SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240

Query: 241 KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 284

[Close]

BLAST of Carg20590 vs. NCBI nr
Match: KAG6571253.1 (hypothetical protein SDJN03_30168, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 535.0 bits (1377), Expect = 3.9e-148
Identity = 282/284 (99.30%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240
           SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240

Query: 241 KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           KKKRSENG  KEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 KKKRSENG--KEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 282

[Close]

BLAST of Carg20590 vs. NCBI nr
Match: XP_023513034.1 (probable membrane-associated kinase regulator 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.9 bits (1374), Expect = 8.6e-148
Identity = 279/284 (98.24%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLN+TPIRSSAAVQ+EDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNQTPIRSSAAVQTEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQG ILPLRHSFSSENSHNNPFFPRNSSTRSESSD+LRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGQILPLRHSFSSENSHNNPFFPRNSSTRSESSDILRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSSISNNSISIPTNSKPR HNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240
           SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSVDTVAAAG 240

Query: 241 KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 KKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 284

[Close]

BLAST of Carg20590 vs. NCBI nr
Match: XP_022985880.1 (probable membrane-associated kinase regulator 1 [Cucurbita maxima])

HSP 1 Score: 531.9 bits (1369), Expect = 3.3e-147
Identity = 281/285 (98.60%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPL HSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLCHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSSISNNSISIPTNSKPR HNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSAS-AAATPAAHTTAGSFLGVVSCKKSVDTVAAA 240
           SRWDFFRLGLLRTPGMELHDLKTRTNS+S AAATPAAHTTAGSFLGVVSCKKSVDTVAAA
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSSSAAAATPAAHTTAGSFLGVVSCKKSVDTVAAA 240

Query: 241 GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285

[Close]

BLAST of Carg20590 vs. NCBI nr
Match: XP_022932915.1 (probable membrane-associated kinase regulator 1 [Cucurbita moschata])

HSP 1 Score: 517.3 bits (1331), Expect = 8.3e-143
Identity = 275/287 (95.82%), Postives = 277/287 (96.52%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSS+SNNSISIPTNSKPR HNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSLSNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTN---SASAAATPAAHTTAGSFLGVVSCKKSVDTVA 240
           SRWDFFRLGLLRTPGMELHDLKTRTN   SA+AAATPAAHTTAGSFLGVVSCKKSVDTVA
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSSSSATAAATPAAHTTAGSFLGVVSCKKSVDTVA 240

Query: 241 AAGKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           AAGKKKRSENG    KE EKER TRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 AAGKKKRSENG----KENEKERGTRVSHRRTFEWVKQLSHASSGDEQ 283

[Close]

BLAST of Carg20590 vs. ExPASy TrEMBL
Match: A0A6J1JCH9 (probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=LOC111483795 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.6e-147
Identity = 281/285 (98.60%), Postives = 282/285 (98.95%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPL HSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLCHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSSISNNSISIPTNSKPR HNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSAS-AAATPAAHTTAGSFLGVVSCKKSVDTVAAA 240
           SRWDFFRLGLLRTPGMELHDLKTRTNS+S AAATPAAHTTAGSFLGVVSCKKSVDTVAAA
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSSSAAAATPAAHTTAGSFLGVVSCKKSVDTVAAA 240

Query: 241 GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 GKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285

[Close]

BLAST of Carg20590 vs. ExPASy TrEMBL
Match: A0A6J1F3H1 (probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN=LOC111439472 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.0e-143
Identity = 275/287 (95.82%), Postives = 277/287 (96.52%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF
Sbjct: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60

Query: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120
           NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG
Sbjct: 61  NHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRFRNG 120

Query: 121 STSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180
           STSSSSSRSHYSRSSS+SNNSISIPTNSKPR HNNVFHSHPSPTPQIRSHSTSGRRSRSS
Sbjct: 121 STSSSSSRSHYSRSSSLSNNSISIPTNSKPRPHNNVFHSHPSPTPQIRSHSTSGRRSRSS 180

Query: 181 SRWDFFRLGLLRTPGMELHDLKTRTN---SASAAATPAAHTTAGSFLGVVSCKKSVDTVA 240
           SRWDFFRLGLLRTPGMELHDLKTRTN   SA+AAATPAAHTTAGSFLGVVSCKKSVDTVA
Sbjct: 181 SRWDFFRLGLLRTPGMELHDLKTRTNSSSSATAAATPAAHTTAGSFLGVVSCKKSVDTVA 240

Query: 241 AAGKKKRSENGKEKEKEKEKERETRVSHRRTFEWVKQLSHASSGDEQ 285
           AAGKKKRSENG    KE EKER TRVSHRRTFEWVKQLSHASSGDEQ
Sbjct: 241 AAGKKKRSENG----KENEKERGTRVSHRRTFEWVKQLSHASSGDEQ 283

[Close]

BLAST of Carg20590 vs. ExPASy TrEMBL
Match: A0A6J1G7B7 (uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC111451408 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.8e-82
Identity = 201/312 (64.42%), Postives = 231/312 (74.04%), Query Frame = 0


Query: 1   MGRSCHGDETWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFDF 60
           M  + HG     E++  Q++++EEALS CDLP+KE Q P  LNE PI       +EDFDF
Sbjct: 1   MATTIHG-----EEHDKQDEDEEEALSLCDLPVKEKQQPSLLNENPI-------TEDFDF 60

Query: 61  NHC-PPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD--MLRF 120
           NH  PPP P PMCAAD++FFQGH+LPLR S SS+N+HN+ FF +  S RSES D  MLRF
Sbjct: 61  NHWPPPPSPPPMCAADDIFFQGHLLPLRLSVSSDNTHNH-FFSKPLSARSESMDHNMLRF 120

Query: 121 RNGSTSSS--SSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGR 180
           RNGS+SSS  SSRSHYSR SSISNNSISIPTNSKPR+ NNVFHSHPSPTPQIRS ST GR
Sbjct: 121 RNGSSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR 180

Query: 181 --RSRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASAAATPAAHTTAGSFLGVVSCKKSV 240
             RSRSSSRWDFFR+GLLRTPGMELHDLKTRT  ++A  T    TTA SFLGVVSCKKSV
Sbjct: 181 RSRSRSSSRWDFFRVGLLRTPGMELHDLKTRTTVSNAVPTVGQKTTA-SFLGVVSCKKSV 240

Query: 241 DTVAAAGK---------KKRSENGK-----EKE-------KEKEKERETRVSHRRTFEWV 285
           +T+ AA K         KKR+E GK     EKE       +EKEKE+ TR+SHRRTFEW+
Sbjct: 241 ETIPAAKKIKNWSGNIGKKRNEKGKGIGIREKELNDNVEIREKEKEKATRLSHRRTFEWL 298

[Close]

BLAST of Carg20590 vs. ExPASy TrEMBL
Match: A0A6J1KZ54 (uncharacterized protein LOC111499574 OS=Cucurbita maxima OX=3661 GN=LOC111499574 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.3e-80
Identity = 197/310 (63.55%), Postives = 228/310 (73.55%), Query Frame = 0


Query: 1   MGRSCHGDE-TWEEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFD 60
           M  + HGDE   +++   +E+E+EEALS CDLP+KE Q PL L+E PI       +EDFD
Sbjct: 1   MATTIHGDEHDNQDEEDEEEEEEEEALSMCDLPVKEKQQPLLLDENPI-------TEDFD 60

Query: 61  FNHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSD--MLRF 120
           FNH PPP   PMCAAD++FFQGH+LPLR S SS+N+HN+ FF +  S RSES D  MLRF
Sbjct: 61  FNHWPPP---PMCAADDIFFQGHLLPLRLSVSSDNTHNH-FFSKPLSARSESMDHNMLRF 120

Query: 121 RNGSTSSS-SSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHSTSGRR 180
           RNGS+SSS SSRSHYSR SSISNNSISIPTNSKPR+ NNVFHSHPSPTPQIRS ST GR 
Sbjct: 121 RNGSSSSSNSSRSHYSRCSSISNNSISIPTNSKPRTQNNVFHSHPSPTPQIRSFSTFGR- 180

Query: 181 SRSSSRWDFFRLGLLRTPGMELHDLKTRTNSASA--AATPAAHTTAGSFLGVVSCKKSVD 240
            RSSSRWDFFR+GLLRTPGMELHDLKTRT + +A  A       T G+FLGVVSCKKSVD
Sbjct: 181 -RSSSRWDFFRVGLLRTPGMELHDLKTRTTNGAAFEAEPTVGQKTRGTFLGVVSCKKSVD 240

Query: 241 TVAAAGK---------KKRSENGK-----EKE-------KEKEKERETRVSHRRTFEWVK 284
           T+ AA K         KKR+E GK     E E       +EKEKE+ TR+SHRRTFEW+K
Sbjct: 241 TIPAAKKIKNWSGNIVKKRNEKGKGIGIRENELNDNVEIREKEKEKATRLSHRRTFEWLK 297

[Close]

BLAST of Carg20590 vs. ExPASy TrEMBL
Match: A0A0A0LPT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.2e-78
Identity = 190/312 (60.90%), Postives = 220/312 (70.51%), Query Frame = 0


Query: 3   RSCHGDETWEEQNQ----------IQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAA 62
           RSCHGDE  EE+++           +E+E+EEALS CDLP+KE Q P       + ++  
Sbjct: 7   RSCHGDERCEEEDKEETQIDDDDDEEEEEEEEALSLCDLPVKEKQQPTR----SVSTTVV 66

Query: 63  VQSEDFDFNHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESS 122
              +DFDFNH  PP P PM  AD++FFQGH+LPLR SFSSENS NN     N   RSES 
Sbjct: 67  ETDQDFDFNHWRPP-PSPMLTADDLFFQGHMLPLRLSFSSENSQNN---NGNLWCRSESM 126

Query: 123 D---MLRFRNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPR-SHNNVFHSHPSPTPQIR 182
           D   MLRFRN STSSSSSRSHYSRSSS+SNNSISIPTNSKPR S+NNVFHSHPSPTPQIR
Sbjct: 127 DGNNMLRFRNESTSSSSSRSHYSRSSSLSNNSISIPTNSKPRPSNNNVFHSHPSPTPQIR 186

Query: 183 SHSTSGRRSRSSSRWDFFRLGLLRTPGMELHDLKTR--TNSASAAATPAAHTTAGSFLGV 242
           S STS  RSRSSSRW+FFRLGLLRTPGMELHDLKTR  T + +   T  AH T  S LGV
Sbjct: 187 SFSTSSHRSRSSSRWEFFRLGLLRTPGMELHDLKTRTTTTTTTTTTTSTAHKTTASILGV 246

Query: 243 VSCKKSVDTVAAA--------------GKKKRSENGKEKEKEKEKERETRVSHRRTFEWV 285
           VSCK+SV+TV                   KK +++ K + +EKEKE+E RVSHRRTFEW+
Sbjct: 247 VSCKRSVETVPTTTGSKNRIRRENVLENNKKNNDDNKVEIREKEKEKERRVSHRRTFEWL 306

[Close]

BLAST of Carg20590 vs. TAIR 10
Match: AT5G67350.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15
Identity = 98/310 (31.61%), Postives = 140/310 (45.16%), Query Frame = 0


Query: 12  EEQNQIQEQEDEEALSFCDLPLKETQPPLNLNETPIRSSAAVQSEDFD------------ 71
           E+ + ++E+E+EEALS CDLP ++ +         +RS    + E+FD            
Sbjct: 21  EDDDDVEEEEEEEALSLCDLPNEKGE---------LRSIVKEEDEEFDSGFEFGIGSSFR 80

Query: 72  --FNHCPPPLPQPMCAADEVFFQGHILPLRHSFSSENSHNNPFFPRNSSTRSESSDMLRF 131
              + C P     M  ADE+FF+G ILPLRHS S +   N    P    TRSES   + F
Sbjct: 81  AGSDSCEP--APEMSTADELFFKGRILPLRHSVSLDAGLNE---PTRLITRSES---VEF 140

Query: 132 RNGSTSSSSSRSHYSRSSSISNNSISIPTNSKPRSHNNVFHSHPSPTPQIRSHST----- 191
           R      S  +        I NN I               +S PSP PQIR  S+     
Sbjct: 141 RRTGIIRSDRK--------IKNNFID--------------YSQPSPQPQIRRSSSMTARV 200

Query: 192 -SGRRSRSSSRWDFFRLGLLRTPGMELHDLK-------TRTNSASAAATPAAHTTAGS-- 251
            S R  +SSS WDF RLGL+RTP +EL           +R +S S+ +T +     GS  
Sbjct: 201 NSIRNPKSSSIWDFLRLGLVRTPEIELRTTAGNAKLSVSRNSSCSSTSTSSNSKKIGSGE 260

Query: 252 ----------FLGVVSCKKSVDTVAAAGKKKRSENGKEKEKEK-------EKERETRVSH 276
                           C  S +T  A  K K S +G+ +EK++       +KE ++ ++ 
Sbjct: 261 SRSRNRRRSFMFSDCKCSVSTETKMAPVKIKVS-SGETEEKQRMMEKKTAKKEEKSAMAR 290

The following BLAST results are available for this feature:

BLAST of Carg20590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020165.1	1.8e-150	100.00	hypothetical protein SDJN02_16847 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571253.1	3.9e-148	99.30	hypothetical protein SDJN03_30168, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513034.1	8.6e-148	98.24	probable membrane-associated kinase regulator 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022985880.1	3.3e-147	98.60	probable membrane-associated kinase regulator 1 [Cucurbita maxima]	[more]
XP_022932915.1	8.3e-143	95.82	probable membrane-associated kinase regulator 1 [Cucurbita moschata]	[more]

BLAST of Carg20590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCH9	1.6e-147	98.60	probable membrane-associated kinase regulator 1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F3H1	4.0e-143	95.82	probable membrane-associated kinase regulator 1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G7B7	1.8e-82	64.42	uncharacterized protein LOC111451408 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A6J1KZ54	1.3e-80	63.55	uncharacterized protein LOC111499574 OS=Cucurbita maxima OX=3661 GN=LOC111499574...	[more]
A0A0A0LPT6	1.2e-78	60.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G277620 PE=4 SV=1	[more]

BLAST of Carg20590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67350.1	4.1e-15	31.61	unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..284
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..178
None	No IPR available	PANTHER	PTHR33922	OS01G0888066 PROTEIN-RELATED	coord: 1..279
None	No IPR available	PANTHER	PTHR33922:SF2	OS01G0888066 PROTEIN	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20590-RA	Carg20590-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity