Carg20556 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20556
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr12: 733171 .. 734346 (-)
RNA-Seq Expression	Carg20556
Synteny	Carg20556

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCCTTGCCACAAGGTCACAATGGATCCCTCCTCCACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTAGAACGGGTATACCTTTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTCCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGTTGGATGAGTATATGGATGAGAGTTCCAAGCTGTGGGACGCCTGCCATGTCCTCAAATCAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTTCACAAGTTTCTCGCCAGGTCCATTTCGAAAATCCCAATACCAATCCCAATCTAAATTTTCATCGTGTGTTAGTTTGTTTTATTTTGTTTTGTTTGGAAGCATTGAGTTCATAATCTAAGAGATTTCGACCTTTTGAAATACAGGTGATTAGAGCAATATCAGGGTGTCGACGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCTCTCTCTCTAAGATTTGATGAAAAAGTATCGATCGAATCAAAGCTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTCATGATCTTACTCTACGGACTGGTTTACTGTTGGCCGGAATCGAATTTTGTAAGAGGAGGGTATGAAGGGTGTCTGTTTTTCGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCGGTCAGATGAACGGGAGGCCTGGGATTTTGCTGTACGAGTTTAGGAGGTCGAAGATGGCGATGGAGGAATTGAGGGCGGAATTGGAGGGATGGGTGGGGATGGGGTCGCAGGGAGTAGTGGAATGGGAAACAGAGATTGGAATTAGAGAAAGGGTTGAGAATTTGAGAGCCTGTTTTGGGGTGCTGAGATCTGGAGCTGAGAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCACAGGTAGACAGTCACAGGGATGGAAAAATATTGTAGTTGTTATGGTTCAAAGGCC

mRNA sequence

TCTCTCTCTCCTTGCCACAAGGTCACAATGGATCCCTCCTCCACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTAGAACGGGTATACCTTTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTCCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGTTGGATGAGTATATGGATGAGAGTTCCAAGCTGTGGGACGCCTGCCATGTCCTCAAATCAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTTCACAAGTTTCTCGCCAGGTGATTAGAGCAATATCAGGGTGTCGACGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCTCTCTCTCTAAGATTTGATGAAAAAGTATCGATCGAATCAAAGCTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTCATGATCTTACTCTACGGACTGGTTTACTGTTGGCCGGAATCGAATTTTGTAAGAGGAGGGTATGAAGGGTGTCTGTTTTTCGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCGGTCAGATGAACGGGAGGCCTGGGATTTTGCTGTACGAGTTTAGGAGGTCGAAGATGGCGATGGAGGAATTGAGGGCGGAATTGGAGGGATGGGTGGGGATGGGGTCGCAGGGAGTAGTGGAATGGGAAACAGAGATTGGAATTAGAGAAAGGGTTGAGAATTTGAGAGCCTGTTTTGGGGTGCTGAGATCTGGAGCTGAGAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCACAGGTAGACAGTCACAGGGATGGAAAAATATTGTAGTTGTTATGGTTCAAAGGCC

Coding sequence (CDS)

TCTCTCTCTCCTTGCCACAAGGTCACAATGGATCCCTCCTCCACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTAGAACGGGTATACCTTTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTCCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGTTGGATGAGTATATGGATGAGAGTTCCAAGCTGTGGGACGCCTGCCATGTCCTCAAATCAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTTCACAAGTTTCTCGCCAGGTGATTAGAGCAATATCAGGGTGTCGACGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCTCTCTCTCTAAGATTTGATGAAAAAGTATCGATCGAATCAAAGCTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTCATGATCTTACTCTACGGACTGGTTTACTGTTGGCCGGAATCGAATTTTGTAAGAGGAGGGTATGAAGGGTGTCTGTTTTTCGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCGGTCAGATGAACGGGAGGCCTGGGATTTTGCTGTACGAGTTTAGGAGGTCGAAGATGGCGATGGAGGAATTGAGGGCGGAATTGGAGGGATGGGTGGGGATGGGGTCGCAGGGAGTAGTGGAATGGGAAACAGAGATTGGAATTAGAGAAAGGGTTGAGAATTTGAGAGCCTGTTTTGGGGTGCTGAGATCTGGAGCTGAGAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCACAGGTAG

Protein sequence

SLSPCHKVTMDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGILLYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR

Homology

[Close]

BLAST of Carg20556 vs. NCBI nr
Match: KAG7020198.1 (hypothetical protein SDJN02_16881, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 667.9 bits (1722), Expect = 4.5e-188
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   SLSPCHKVTMDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQ 60
           SLSPCHKVTMDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQ
Sbjct: 1   SLSPCHKVTMDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQ 60

Query: 61  LTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRH 120
           LTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRH
Sbjct: 61  LTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRH 120

Query: 121 LSSQVSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRG 180
           LSSQVSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRG
Sbjct: 121 LSSQVSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRG 180

Query: 181 VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIG 240
           VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIG
Sbjct: 181 VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIG 240

Query: 241 QMNGRPGILLYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGV 300
           QMNGRPGILLYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGV
Sbjct: 241 QMNGRPGILLYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGV 300

Query: 301 LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 334
           LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 333

[Close]

BLAST of Carg20556 vs. NCBI nr
Match: XP_022951569.1 (uncharacterized protein LOC111454346 [Cucurbita moschata] >XP_023002734.1 uncharacterized protein LOC111496506 [Cucurbita maxima] >XP_023538473.1 uncharacterized protein LOC111799240 [Cucurbita pepo subsp. pepo] >KAG6585279.1 hypothetical protein SDJN03_18012, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648.7 bits (1672), Expect = 2.8e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. NCBI nr
Match: XP_008445364.1 (PREDICTED: uncharacterized protein LOC103488422 [Cucumis melo] >KAA0064813.1 uncharacterized protein E6C27_scaffold82G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 630.9 bits (1626), Expect = 6.0e-177
Identity = 316/324 (97.53%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYS+GFNITSSL+THRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. NCBI nr
Match: XP_038886534.1 (uncharacterized protein LOC120076707 [Benincasa hispida])

HSP 1 Score: 630.2 bits (1624), Expect = 1.0e-176
Identity = 316/324 (97.53%), Postives = 319/324 (98.46%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSL+ HRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLEAHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. NCBI nr
Match: KAG7029609.1 (hypothetical protein SDJN02_07949, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 626.7 bits (1615), Expect = 1.1e-175
Identity = 315/324 (97.22%), Postives = 317/324 (97.84%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VG+GSQGVVEWETEIGIRE  ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. ExPASy TrEMBL
Match: A0A6J1KRA7 (uncharacterized protein LOC111496506 OS=Cucurbita maxima OX=3661 GN=LOC111496506 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. ExPASy TrEMBL
Match: A0A6J1GJ63 (uncharacterized protein LOC111454346 OS=Cucurbita moschata OX=3662 GN=LOC111454346 PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 1.4e-182
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. ExPASy TrEMBL
Match: A0A5A7V9I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001210 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 2.9e-177
Identity = 316/324 (97.53%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYS+GFNITSSL+THRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. ExPASy TrEMBL
Match: A0A1S3BCI5 (uncharacterized protein LOC103488422 OS=Cucumis melo OX=3656 GN=LOC103488422 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 2.9e-177
Identity = 316/324 (97.53%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYS+GFNITSSL+THRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. ExPASy TrEMBL
Match: A0A0A0LK57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G317400 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.4e-176
Identity = 314/324 (96.91%), Postives = 318/324 (98.15%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLS LRSFHSQL LLVQKLH
Sbjct: 1   MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSHLRSFHSQLILLVQKLH 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSL+THRHLS Q+SRQV
Sbjct: 61  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLETHRHLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 189
           IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180

Query: 190 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIGQMNGRPGIL 249
           SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEI QMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240

Query: 250 LYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 309
           LYEFRRSKMAMEELRAELE  VGMGSQG+VEWETEIGIRERVENLRACFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRERVENLRACFGVLRSGAENIV 300

Query: 310 CQLDDFIDEIVEGRKKLLDFCSHR 334
           CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324

[Close]

BLAST of Carg20556 vs. TAIR 10
Match: AT1G22030.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 384.4 bits (986), Expect = 9.2e-107
Identity = 211/345 (61.16%), Postives = 251/345 (72.75%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MDPS  NSVNGFY+FL R ++DLERVYLSNNFMS+ FLQR L LLR+ HS LTLLVQKL 
Sbjct: 1   MDPSCANSVNGFYSFLNRSMEDLERVYLSNNFMSVHFLQRALCLLRTSHSHLTLLVQKLQ 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSSQVSRQV 129
           LPVG+KWLDEYMDESSKLW+AC V+KS +S +ENF SAG +I S+LD  R LS Q+SRQV
Sbjct: 61  LPVGDKWLDEYMDESSKLWEACLVIKSAVSSVENFSSAGISIASTLD--RRLSPQLSRQV 120

Query: 130 IRAISGCRREAVGLEEENRALMEARIQ--PLSLRFDEKVSIESKL---NGFNGFRGVLYA 189
           IRAISGCRREA+G+EEENRALME R+Q  P         ++ES     NGF+GFRGVLYA
Sbjct: 121 IRAISGCRREAIGIEEENRALMENRVQRFPFWSEQTSATAMESSTKLQNGFSGFRGVLYA 180

Query: 190 MRNVSSLLLMILLYGLVYCWP------------ESNFVRGGYEGCLFFGSAFMISTARLQ 249
            RN+SSLLLM+L+ GLVYC+P            ++    GG+ G +           RLQ
Sbjct: 181 TRNMSSLLLMVLMNGLVYCFPGDAATQTQTQITQTQSQVGGFAGAM----------GRLQ 240

Query: 250 QRVAGEIGQMNGRPGILLYEFRRSKMAMEELRAELE----GWVGMGSQGVVEWETEIGIR 309
           QRVA E+G+M  R GIL++E+RRSK A+EEL+AELE    G  G G +   E E E  +R
Sbjct: 241 QRVAAEVGRMGIRKGILMHEYRRSKAALEELKAELERRFCGGGGGGGEREEEEEDERELR 300

Query: 310 ERVENLRACFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 334
           ERVENL+  FG LR+G E+IV Q+DDF DEIVEGRKKLLDFCSHR
Sbjct: 301 ERVENLKGYFGNLRNGTESIVAQIDDFFDEIVEGRKKLLDFCSHR 333

[Close]

BLAST of Carg20556 vs. TAIR 10
Match: AT1G77855.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22030.1); Has 120 Blast hits to 120 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 357.8 bits (917), Expect = 9.2e-99
Identity = 196/333 (58.86%), Postives = 245/333 (73.57%), Query Frame = 0


Query: 10  MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 69
           MD S +NSVNGFY+FL R ++DLERVY+SNNFMS+QFLQRV+ LLR+ HS LTLLVQKL+
Sbjct: 1   MDQSCSNSVNGFYSFLNRSMEDLERVYISNNFMSLQFLQRVICLLRTSHSHLTLLVQKLN 60

Query: 70  LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRH----LSSQV 129
           LPVG+KWLD+YMDE+SKLWD CHV+KS IS IE+F S+  +ITS+LD H H    LS Q+
Sbjct: 61  LPVGDKWLDDYMDETSKLWDVCHVIKSAISTIESFCSSAISITSTLDGHYHHRRLLSPQI 120

Query: 130 SRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSI----ESKL-NGFNGFRG 189
           SRQVIRAISGCRREAVG+EEENRALME RIQ     + E+V+      SK+ NGF+GFRG
Sbjct: 121 SRQVIRAISGCRREAVGIEEENRALMENRIQRFPF-WSEQVTTTGMESSKIQNGFSGFRG 180

Query: 190 VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIG 249
           V+  M+N++SLLL+IL+ GLVY  P    V  G             +  RL+QRVA E+ 
Sbjct: 181 VMNTMKNINSLLLVILMQGLVYYIPGDTTVPTG-------------TMMRLKQRVAAEME 240

Query: 250 QMNGRPGILLYEFRRSKMAMEELRAELEGWVGMGSQGVVEWETEIGIRERVENLRACFGV 309
           ++  R G+++YE+RRSK AMEEL+ ELE     G  G  E   E G+RER+ENL+   G 
Sbjct: 241 RIGVRKGMMMYEYRRSKTAMEELKVELERRCCGG--GGEEEAVEKGLRERIENLKGSVGS 300

Query: 310 LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 334
           LR+G E+IV Q+DDF D+IV+GRK LLD+CSHR
Sbjct: 301 LRNGTESIVAQIDDFFDDIVDGRKMLLDYCSHR 317

The following BLAST results are available for this feature:

BLAST of Carg20556 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020198.1	4.5e-188	100.00	hypothetical protein SDJN02_16881, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022951569.1	2.8e-182	100.00	uncharacterized protein LOC111454346 [Cucurbita moschata] >XP_023002734.1 unchar...	[more]
XP_008445364.1	6.0e-177	97.53	PREDICTED: uncharacterized protein LOC103488422 [Cucumis melo] >KAA0064813.1 unc...	[more]
XP_038886534.1	1.0e-176	97.53	uncharacterized protein LOC120076707 [Benincasa hispida]	[more]
KAG7029609.1	1.1e-175	97.22	hypothetical protein SDJN02_07949, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Carg20556 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20556 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRA7	1.4e-182	100.00	uncharacterized protein LOC111496506 OS=Cucurbita maxima OX=3661 GN=LOC111496506...	[more]
A0A6J1GJ63	1.4e-182	100.00	uncharacterized protein LOC111454346 OS=Cucurbita moschata OX=3662 GN=LOC1114543...	[more]
A0A5A7V9I2	2.9e-177	97.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BCI5	2.9e-177	97.53	uncharacterized protein LOC103488422 OS=Cucumis melo OX=3656 GN=LOC103488422 PE=...	[more]
A0A0A0LK57	9.4e-176	96.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G317400 PE=4 SV=1	[more]

BLAST of Carg20556 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22030.1	9.2e-107	61.16	CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Ar...	[more]
AT1G77855.1	9.2e-99	58.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31509	BPS1-LIKE PROTEIN	coord: 10..332
None	No IPR available	PANTHER	PTHR31509:SF114	SUBFAMILY NOT NAMED	coord: 10..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20556-RA	Carg20556-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane