Carg20554 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20554
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Auxin response factor
Location	Carg_Chr12: 748675 .. 753031 (-)
RNA-Seq Expression	Carg20554
Synteny	Carg20554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCGACAACTTTGGCAGGCTTTTGCCGGTAAGTCTGTCCATATTCACACTGTCGGTTCTGAGGTTTACTATTTCGTACAAGGACATGTCGAGCAAGCTACATACATACCATCACTATCTCAGTCTGTTTTTTCTAATCCTGCCACTAAATGTCTCGTTACTGGCACTGATTTTCATGCCGATTCTCTTTCTGATGAAGTCTGCATTAAGTTGAATCTTCATCCCATTCGGCCTGGTCGGGATGAGTCTGTTCTGGTTTCCCGATTTGGTCGTTGTGATGATAATGGCGGGGAGAGGGATAAGATTGAGTCGTTTGCTAAGATTCTTACGTCTTCTGATGCTAATAATGGCGGTGGATTTTCTGTGCCGCGGTGCTGTGCGGATTCTGTTTTTCCTCCCTTGAACTACCAGGCTGATCCGCCGGTGCAGAATTTGTCGATTACTGATGTTCATGGAGTTGTTTGGAATTTTCGTCACATTTACCGTGGGACGCCGAGGCGGCATTTGCTCACTACTGGGTGGAGTAAGTTCGTTAATCATAAGAAGCTGATTGCCGGTGATTCCGTCGTTTTCGCGAAGAATCTTAGAGGGGATATGTTCGTTGGCATTCGTCGTGCCTCAACCTCTATCACAAGGGCTATCGCAGGCGGTGATTGCGGCCGGTGGAATAGCCAGAATGGTGGAGCAAGATGCAGTTTGGAGGAGAATTGTTCTGGCGATGGAGGAACAAAAGTTTTCTCCCGGAGGAATATTGGGAAGCTGCCGGCCGAGGCAGTTGCCAACGCTGCGGAATTGGCCGCGCAATTTAAGCCATTCGAATTGGTTTATTATCCTAGGGCTGGTCGGTCGGAATTTGTTGTTCAAGTCGAGAAGGTGAATGAATCGAAGAATTATCAGTGGTATTCTGGAACAAGAGTGAAAATGGCCATGGAGACCGAGTATTCGAAGATGACATGGTATCAAGGGACTGTAACCTCAGCATCTGTTCCTGAGCACGGACCTTGGATGGGTTCTCCATGGCGTATGCTTGAGGTAGACCTTTGTCTCTAATTCCGTATGCATAGCAACTATCATATCTACTTTTGAATGTGTATTGAATCTTGCTTCGTTTGATTGTCTGAGTTTATTGATCGTTTTGCTTGTATTTAATTTCTGTTTTTAATCTCAACGTGACAAATCAGTAATGAGAAATTGGATTGGATCTATGACGTTATACACATACTTTTAGGATTTATATTGAATTCTCTGTTTCTTATCGAGGGAGAGAAAAAAACACAAAGAAACGAAAGAAGTAGTAGAGTCACTCACTCTAGGTAATTTCATTAGGGATGGTCTGTTGGTTCCCCCCCCCCCTGAAATATGCTTATATTTTTAACGATGAGTGAGATCCCACCTTGGTTGGAGAGGGGAACGAAACATTTCTTATAAAAGTGTGGAAACCTCTCCCTAGCAGACTCATTTTAAAACCGTGAGGTTGACGGCGATACGTAACGGGCCAAAGTGGACAATATCTACTAGTAGTGGGTTTGGCCGTTTACAAATGGTATTAGAGTCAGACACCAGATAGTGTGCCAGCGAGGACACTCGGCCCTCAAAGGGGTGGATTGTGAGATCTCACATCGGTTGGAGAGGGGAATGAAACATTCCTTGTAAGGGTGTGGAAACCTCTCCCTGTGCTTTAAAACGGTGAGACTAACGGCGATAAGTAACCGGCCAAAGCGGACAATATCTTCTAGTGGTGAGATTCGTCTATTACACAATATCTCTTTTCTTATTAGTAGTCTGCAAGTTTATCCTAATTCTAAGTTAAAGAACTGGAGTTGTAACTTAGGTGAGTATCTTTTCTCTTAATGACGAACATGTATCATGTAAGCAGCAGTCAGGGGATTATTTGGTGTTGGATAGTTTGGCGTTTGTTTCAGTTGCTGGGTGTTTTGTATTAATATGGTTGATCTGACAAAAATGCTCTTGGACAATAAAAGAATGCAAATGGGATGACTTTTCTGCAAGTGCAAAACTTGGAACTTTAGCTATCTCTGCTCTATCTGTTGCTTTCTCTTTACCAGCATTTGCTATTATTATTATTGTTGTTGTTTTCATGTTATTGCCTTTTTTATGTCTTAGGTTACATGGGATGAAATTGATACTCTGCAGAGTGCTAAGTACGTGAGCCCTTGGGAAGTTGAACTAGCTACGCCCACTCCACCAATACAACCTCCTCTTCACCCAGCAAAGAAGTTTAGAGGTCTCCCGAAATCTGGGATGCTGAATGGTGAAGCAGAGCTGTTTTCACCTCTGATGAATTTCGTTGATTCAACAATGGAACAATTCAACCCATCATTGTTGAATCTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAAGTTATTCTGTGAATCTAGGTTATTCAACCCATGTAAAGAAATGACCCCACTAACATGTGATGAAAGTTCCATGAGCGAGCTGAATGCTGCGAAGAAGATGCAAATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTTTGATACCTTGTCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACTGCTGAGAACCAGAACTGCTGCAACTCAGCTAAAGCTGGAGTAAATTCAATTCAGTTGTTTGGTCAAGTCATCTATATGAATCCGCCAGTTGAAAATGGACTTGAAAATGGTGTTAGCACTAATGATGGTGGCAAGAATCCTAATCAGTCCGCATGATCTTCTTTGATCCGTACAAACTTTCTTGTCGTGTGCTAGACTGGGAGCTGGGTGTAGAAGGAAGTAGCTGTATACAGGTACGCATGTCTCATATCCTTTATACTTTGGCATTGCTGAATTTTGTGAACAGAAGTGTTCGTTTTGAATTTTGAAGTCATATGAATAGAAATTAGTCACTTCATGAATAGGTCAAAGTATATATGGTGATGTCGAATATTATTCTTTGTTACTTACTATGATACTAATTCTTCTATTCTAACATATTTACATTCTTTTTGCCCTTTGCATGCCTCTTTCATTAAACTCTATCAAATGGTTGTCGAACTCTGTCTGTTTTGTTATGAGATTCCACGTTGTTAGGAGAGTGGAACAAAGTGTTCCTTATAAAGATATGGAAACCTCTCCCTAGCATATGTATTTTAAAACCGTGAGGCTAACGGCAGTACGTAATGGGTGAAAATGTACAATATCTACTAACGGTGGGCTTGTACTATTACAAATGGTATCAGAGCTAAATACTGGGCGGTGTGCCAGTGAGGACGCCAGGCCCCCAAGAGGAGTGGATTATGAGATCCCACATCGGTTGGAGAGGGGAACGAATCATTTCTTATGAGAGTGTGGAAACCTCTGCCAAGTAGATGCTAGGCCCCCAAGAGAGGTGGATTGTGAAATCCCACATCGGTTGGAGAGGGGAACGAATAATTTCTTATGAGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAACTGTGAGGTTGACAGCGATACGTAACCGGCCAAAAGTGAACATATATACTAGCAATGAGTTTGAGCTGTTAGGAGCGGTTACACTTGTCAAATATTAACCTAGACTTGGAATAGAATGAAATGTTTGATCGTGCCCTGTAATGATACGATAATCAGTGTTTATTTAGATGGTTAGTCATTTCAAACACTTAAAAATTCATGTTTGGGCTTCATGAAAAGGCAATTCATATCTAAATGTATGTGTTGATGTTGATGGACTATTTTGTTTTCCCTCTTGTCCTAGGTACTTGGGGCAGGGCAGGCAGGAAGCTGACTACAATATGAACATTGGCAGTAGATAGTTTGTCAATGGTAGTTCGTGTTTAGATTGATGGCCTCAAAGGTCTTGGATTCTGAATTTTTGCTGACGTTTGGATACTCAGTTGCTTGAGTTTGCTTTAGATGTTTGTAAGCTTTGGAGATTGTTGAACCATTTTTAGGCCTCTTCTTTAGTGTGGATGGTTGAGACATGATTTGTCAAAGAGCTAATTCTCTTGATGGGCTTGGTGGGAAAAGTGTTTCAAATTGAACTAACCCGCTCGCCATTGTAGTTAGAAATTCTTGGTCGTTGTTGAGTAGAGTAGCTCATTGTCGTTGTAGAGAATTTAATCGTTGAATATCATAGTCGCTCATCGTTGAGAATCCTATCCTAGTCATGTAAGAAGTACTGGTGCGAAGTTCAGTAAATGAGACCACGACGAAGTGGTGTAGCTGCAATACAAAGCTCCTTACCTTAGCTAGATAACCCTCTAAATCTTCTGACTGCGTCATTTGAGATCGATATCGGATTCGGATAAGATTTTGAGTTATCTTTTGTCTCTCC

mRNA sequence

ATGGACCGACAACTTTGGCAGGCTTTTGCCGGTAAGTCTGTCCATATTCACACTGTCGGTTCTGAGGTTTACTATTTCGTACAAGGACATGTCGAGCAAGCTACATACATACCATCACTATCTCAGTCTGTTTTTTCTAATCCTGCCACTAAATGTCTCGTTACTGGCACTGATTTTCATGCCGATTCTCTTTCTGATGAAGTCTGCATTAAGTTGAATCTTCATCCCATTCGGCCTGGTCGGGATGATTTGGAGGAGAATTGTTCTGGCGATGGAGGAACAAAAGTTTTCTCCCGGAGGAATATTGGGAAGCTGCCGGCCGAGGCAGTTGCCAACGCTGCGGAATTGGCCGCGCAATTTAAGCCATTCGAATTGGTTTATTATCCTAGGGCTGGTCGGTCGGAATTTGTTGTTCAAGTCGAGAAGGTGAATGAATCGAAGAATTATCAGTGGTATTCTGGAACAAGAGTGAAAATGGCCATGGAGACCGAGTATTCGAAGATGACATGGTATCAAGGGACTGTAACCTCAGCATCTGTTCCTGAGCACGGACCTTGGATGGGTTCTCCATGGCGTATGCTTGAGGTTACATGGGATGAAATTGATACTCTGCAGAGTGCTAAGTACGTGAGCCCTTGGGAAGTTGAACTAGCTACGCCCACTCCACCAATACAACCTCCTCTTCACCCAGCAAAGAAGTTTAGAGGTCTCCCGAAATCTGGGATGCTGAATGGTGAAGCAGAGCTGTTTTCACCTCTGATGAATTTCGTTGATTCAACAATGGAACAATTCAACCCATCATTGTTGAATCTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAAGTTATTCTGTGAATCTAGGTTATTCAACCCATGTAAAGAAATGACCCCACTAACATGTGATGAAAGTTCCATGAGCGAGCTGAATGCTGCGAAGAAGATGCAAATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTTTGATACCTTGTCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACTGCTGAGAACCAGAACTGCTGCAACTCAGCTAAAGCTGGAGTAAATTCAATTCAGTTGTTTGGTCAAGTCATCTATATGAATCCGCCAGTTGAAAATGGACTTGAAAATGGTGTTAGCACTAATGATGGTGGCAAGAATCCTAATCAGTACTTGGGGCAGGGCAGGCAGGAAGCTGACTACAATATGAACATTGGCAGTAGATAGTTTGTCAATGGTAGTTCGTGTTTAGATTGATGGCCTCAAAGGTCTTGGATTCTGAATTTTTGCTGACGTTTGGATACTCAGTTGCTTGAGTTTGCTTTAGATGTTTGTAAGCTTTGGAGATTGTTGAACCATTTTTAGGCCTCTTCTTTAGTGTGGATGGTTGAGACATGATTTGTCAAAGAGCTAATTCTCTTGATGGGCTTGGTGGGAAAAGTGTTTCAAATTGAACTAACCCGCTCGCCATTGTAGTTAGAAATTCTTGGTCGTTGTTGAGTAGAGTAGCTCATTGTCGTTGTAGAGAATTTAATCGTTGAATATCATAGTCGCTCATCGTTGAGAATCCTATCCTAGTCATGTAAGAAGTACTGGTGCGAAGTTCAGTAAATGAGACCACGACGAAGTGGTGTAGCTGCAATACAAAGCTCCTTACCTTAGCTAGATAACCCTCTAAATCTTCTGACTGCGTCATTTGAGATCGATATCGGATTCGGATAAGATTTTGAGTTATCTTTTGTCTCTCC

Coding sequence (CDS)

ATGGACCGACAACTTTGGCAGGCTTTTGCCGGTAAGTCTGTCCATATTCACACTGTCGGTTCTGAGGTTTACTATTTCGTACAAGGACATGTCGAGCAAGCTACATACATACCATCACTATCTCAGTCTGTTTTTTCTAATCCTGCCACTAAATGTCTCGTTACTGGCACTGATTTTCATGCCGATTCTCTTTCTGATGAAGTCTGCATTAAGTTGAATCTTCATCCCATTCGGCCTGGTCGGGATGATTTGGAGGAGAATTGTTCTGGCGATGGAGGAACAAAAGTTTTCTCCCGGAGGAATATTGGGAAGCTGCCGGCCGAGGCAGTTGCCAACGCTGCGGAATTGGCCGCGCAATTTAAGCCATTCGAATTGGTTTATTATCCTAGGGCTGGTCGGTCGGAATTTGTTGTTCAAGTCGAGAAGGTGAATGAATCGAAGAATTATCAGTGGTATTCTGGAACAAGAGTGAAAATGGCCATGGAGACCGAGTATTCGAAGATGACATGGTATCAAGGGACTGTAACCTCAGCATCTGTTCCTGAGCACGGACCTTGGATGGGTTCTCCATGGCGTATGCTTGAGGTTACATGGGATGAAATTGATACTCTGCAGAGTGCTAAGTACGTGAGCCCTTGGGAAGTTGAACTAGCTACGCCCACTCCACCAATACAACCTCCTCTTCACCCAGCAAAGAAGTTTAGAGGTCTCCCGAAATCTGGGATGCTGAATGGTGAAGCAGAGCTGTTTTCACCTCTGATGAATTTCGTTGATTCAACAATGGAACAATTCAACCCATCATTGTTGAATCTCAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAAGTTATTCTGTGAATCTAGGTTATTCAACCCATGTAAAGAAATGACCCCACTAACATGTGATGAAAGTTCCATGAGCGAGCTGAATGCTGCGAAGAAGATGCAAATGGTGTCTACTGACCTCCTTATTGGTAGTGTGCAGTTTGATACCTTGTCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACTGCTGAGAACCAGAACTGCTGCAACTCAGCTAAAGCTGGAGTAAATTCAATTCAGTTGTTTGGTCAAGTCATCTATATGAATCCGCCAGTTGAAAATGGACTTGAAAATGGTGTTAGCACTAATGATGGTGGCAAGAATCCTAATCAGTACTTGGGGCAGGGCAGGCAGGAAGCTGACTACAATATGAACATTGGCAGTAGATAG

Protein sequence

MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFHADSLSDEVCIKLNLHPIRPGRDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENGVSTNDGGKNPNQYLGQGRQEADYNMNIGSR

Homology

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BLAST of Carg20554 vs. NCBI nr
Match: KAG7020200.1 (Auxin response factor 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 848.2 bits (2190), Expect = 3.0e-242
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQF 120
           ADSLSDEVCIKLNLHPIRPGRDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQF
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQF 120

Query: 121 KPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASV 180
           KPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASV
Sbjct: 121 KPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASV 180

Query: 181 PEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKS 240
           PEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKS
Sbjct: 181 PEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKS 240

Query: 241 GMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTP 300
           GMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTP
Sbjct: 241 GMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTP 300

Query: 301 LTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAK 360
           LTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAK
Sbjct: 301 LTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAK 360

Query: 361 AGVNSIQLFGQVIYMNPPVENGLENGVSTNDGGKNPNQYLGQGRQEADYNMNIGSR 417
           AGVNSIQLFGQVIYMNPPVENGLENGVSTNDGGKNPNQYLGQGRQEADYNMNIGSR
Sbjct: 361 AGVNSIQLFGQVIYMNPPVENGLENGVSTNDGGKNPNQYLGQGRQEADYNMNIGSR 416

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BLAST of Carg20554 vs. NCBI nr
Match: XP_022951562.1 (auxin response factor 17-like isoform X1 [Cucurbita moschata] >XP_022951563.1 auxin response factor 17-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 748.0 bits (1930), Expect = 4.2e-212
Identity = 397/548 (72.45%), Postives = 398/548 (72.63%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDD------------------------------------- 120
           ADSLSDEVCIKLNLHPIRPGRD+                                     
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQNLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 181 -----------------------------------------------------LEENCSG 240
                                                                LEENCSG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGDCGRWNSQNGGARCSLEENCSG 240

Query: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300
           DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV 360
           WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV
Sbjct: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV 360

Query: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 399
           SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN
Sbjct: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 420

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BLAST of Carg20554 vs. NCBI nr
Match: XP_023536672.1 (auxin response factor 17-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 733.0 bits (1891), Expect = 1.4e-207
Identity = 391/548 (71.35%), Postives = 393/548 (71.72%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSV SNPATKCLVTGTDFH
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTGTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDD------------------------------------- 120
           ADSLSDEVCIKLNLHPIRPGRD+                                     
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 181 -----------------------------------------------------LEENCSG 240
                                                                LEENCSG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAISGGDCGRWNSQNGGARCSLEENCSG 240

Query: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300
           DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVN+SKNYQ
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNKSKNYQ 300

Query: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV 360
           WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEID LQSAKYV
Sbjct: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKYV 360

Query: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 399
           SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN
Sbjct: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 420

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BLAST of Carg20554 vs. NCBI nr
Match: XP_023001892.1 (auxin response factor 17-like [Cucurbita maxima])

HSP 1 Score: 708.4 bits (1827), Expect = 3.7e-200
Identity = 381/546 (69.78%), Postives = 386/546 (70.70%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           M+RQLWQAFAGKSVH HTVGSEVYYFVQGHVEQATYIPSLSQSV SNPATKCLVT TDFH
Sbjct: 1   MNRQLWQAFAGKSVHTHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTSTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDD------------------------------------- 120
           ADSLSDEVCIKLNLHPIR G+D+                                     
Sbjct: 61  ADSLSDEVCIKLNLHPIRSGQDESVLVSRFGRCDDNGGERNKIESFAKILTSSDANNGGG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FSVPRCCADSVFPPLNYRADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 181 ---------------------------------------------------LEENCSGDG 240
                                                              LE+NCSGDG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGGRWNSQNGGARCSLEKNCSGDG 240

Query: 241 GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY 300
           GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY
Sbjct: 241 GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY 300

Query: 301 SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSP 360
           SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEID LQSAKYVSP
Sbjct: 301 SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKYVSP 360

Query: 361 WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN 399
           WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN
Sbjct: 361 WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN 420

[Close]

BLAST of Carg20554 vs. NCBI nr
Match: XP_022951564.1 (auxin response factor 17-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 640.6 bits (1651), Expect = 9.5e-180
Identity = 316/318 (99.37%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 81  RDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV 140
           R  LEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV
Sbjct: 174 RCSLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV 233

Query: 141 EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE 200
           EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE
Sbjct: 234 EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE 293

Query: 201 IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST 260
           IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST
Sbjct: 294 IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST 353

Query: 261 MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV 320
           MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV
Sbjct: 354 MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV 413

Query: 321 STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE 380
           STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE
Sbjct: 414 STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE 473

Query: 381 NGLENGVSTNDGGKNPNQ 399
           NGLENGVSTNDGGKNPNQ
Sbjct: 474 NGLENGVSTNDGGKNPNQ 491

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BLAST of Carg20554 vs. ExPASy Swiss-Prot
Match: Q84WU6 (Auxin response factor 17 OS=Arabidopsis thaliana OX=3702 GN=ARF17 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.7e-49
Identity = 125/305 (40.98%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 95  KVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSG 154
           K F R   GKL AEAV +A   A+Q  PFE+V+YP AG SEFVV+ E V  S +  W  G
Sbjct: 256 KTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPG 315

Query: 155 TRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPW 214
           TRVKMAMETE  S++TW+QG + S++  E GPW GSPW+ L++TWDE + LQ+ K V+PW
Sbjct: 316 TRVKMAMETEDSSRITWFQG-IVSSTYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPW 375

Query: 215 EVELATPTPPIQPPLHPAKKFR-GLPKSGMLNG-EAELFSPLMNFVDSTMEQFNPSLLNL 274
           +VE+A     +  P  PAK+ +   P  G L+G + E+  P      +     +PS+ + 
Sbjct: 376 QVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSY 435

Query: 275 NSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLL-IGSVQ 334
           ++FPAGMQGARQ  F     FNP   +        + + L+    +  VST+++  GS  
Sbjct: 436 STFPAGMQGARQYDFGS---FNPTGFIGGNPPQLFTNNFLSPLPDLGKVSTEMMNFGSPP 495

Query: 335 FDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENG-LENGVST 394
            D LSP+S  + LS       N+   +     VNSIQLFG++I +    E+G  E+G+  
Sbjct: 496 SDNLSPNSNTTNLSSGNDLVGNRGPLSKK---VNSIQLFGKIITVEEHSESGPAESGLCE 553

[Close]

BLAST of Carg20554 vs. ExPASy Swiss-Prot
Match: Q9AV47 (Auxin response factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF22 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.0e-30
Identity = 101/304 (33.22%), Postives = 149/304 (49.01%), Query Frame = 0


Query: 103 GKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAME 162
           GK+    V  AA LA+  +PFE+ YYPRA   +FVV+   V  +   QW SG R KMA E
Sbjct: 278 GKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFE 337

Query: 163 TE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPT 222
           TE  S+++W+ GT++S  V +   W  SPWR+L+VTWDE D LQ+ K VSPW VEL +  
Sbjct: 338 TEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSI 397

Query: 223 PPIQ--PPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFN-PSLLNLNSFPAGM 282
           PPI   P   P KK R +P       E  L +P+  F  + +   N P     ++ PAG+
Sbjct: 398 PPIHLGPFSSPRKKLR-VPPHPDFPFEGHLLNPI--FHGNPLGPSNSPLCCYPDTAPAGI 457

Query: 283 QGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDS 342
           QGAR   F      +   ++        S + L+A      +S   ++ S      + D+
Sbjct: 458 QGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAP----AHDN 517

Query: 343 QASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENG-----LENGVSTNDGG 398
            + +LS +T     +   +  +     I LFG+ I+    + +      L  GV+   G 
Sbjct: 518 ISCLLSISTPQVAEK---SDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVT---GN 568

[Close]

BLAST of Carg20554 vs. ExPASy Swiss-Prot
Match: Q93YR9 (Auxin response factor 16 OS=Arabidopsis thaliana OX=3702 GN=ARF16 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.5e-29
Identity = 101/317 (31.86%), Postives = 146/317 (46.06%), Query Frame = 0


Query: 103 GKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAME 162
           GK+ AE+V  AA LA   +PFE+VYYPRA  SEF V+      +    W SG R KMA E
Sbjct: 269 GKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFE 328

Query: 163 TE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPT 222
           TE  S+++W+ GTV++ +V +   W  SPWR+L+V WDE D LQ+ K V+PW VEL +  
Sbjct: 329 TEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNV 388

Query: 223 PPIQ-PPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQG 282
            PI      P +K   LP+    N       P+ +F  + + + +P    L++ P G+QG
Sbjct: 389 HPIPLTSFSPPRKKMRLPQHPDYNNLINSI-PVPSFPSNPLIRSSPLSSVLDNVPVGLQG 448

Query: 283 ARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQA 342
           AR              +   L+  +     LN        S+  L  S+    +   ++ 
Sbjct: 449 ARHN----------AHQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNIDTKNEK 508

Query: 343 SVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENG---------VSTND 402
                  GT      CN  K+  + I LFG++I    P E   E G            + 
Sbjct: 509 GFCFLTMGTTP----CNDTKSKKSHIVLFGKLIL---PEEQLSEKGSTDTANIEKTQISS 567

Query: 403 GGKNPNQYLGQGRQEAD 409
           GG N N   G+    +D
Sbjct: 569 GGSNQNGVAGREFSSSD 567

[Close]

BLAST of Carg20554 vs. ExPASy Swiss-Prot
Match: Q9SKN5 (Auxin response factor 10 OS=Arabidopsis thaliana OX=3702 GN=ARF10 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.6e-28
Identity = 84/205 (40.98%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 84  LEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKV 143
           ++ N + DG          G++  EAVA A   AA  + FE+VYYPRA   EF V+   V
Sbjct: 253 MKRNGNNDGNAAA-----TGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADV 312

Query: 144 NESKNYQWYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEID 203
             +   +W SG R KMA ETE  S+++W+ GTV++  V +   W  SPWR+L+V WDE D
Sbjct: 313 RSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPD 372

Query: 204 TLQSAKYVSPWEVELATPTPPIQ-PPLHPAKKFR-GLPKSGMLNG-EAELFSPLMNFVDS 263
            LQ+ K VSPW VEL +  P I   P  P KK R   P     +G +  +FSP   F ++
Sbjct: 373 LLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQPFEFPFHGTKFPIFSP--GFANN 432

Query: 264 TMEQFNPSLLN-LNSFPAGMQGARQ 284
              +    L N  N+ PAG+QGARQ
Sbjct: 433 GGGESMCYLSNDNNNAPAGIQGARQ 450

[Close]

BLAST of Carg20554 vs. ExPASy Swiss-Prot
Match: Q653H7 (Auxin response factor 18 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF18 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.1e-28
Identity = 79/202 (39.11%), Postives = 110/202 (54.46%), Query Frame = 0


Query: 91  DGGTKVFSRRNIGKLPA----EAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNES 150
           D G K+ +    GK+ A    E V  AA LA   +PFE+VYYPRA   EF V+   V  +
Sbjct: 267 DDGNKMAAAAR-GKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAA 326

Query: 151 KNYQWYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQ 210
              QW++G R KMA ETE  S+++W+ GTV++  V +   W  SPWR+L+V+WDE D LQ
Sbjct: 327 MRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQ 386

Query: 211 SAKYVSPWEVELATPTPPIQ-PPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQF 270
           + K VSPW VEL +  P I   P  P +K   +P    L  + +  +P+ +  +      
Sbjct: 387 NVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLYPELPIDGQFPTPMFH-GNPLARGV 446

Query: 271 NPSLLNLNSFPAGMQGARQKLF 287
            P     +  PAG+QGAR   F
Sbjct: 447 GPMCYFPDGTPAGIQGARHAQF 466

[Close]

BLAST of Carg20554 vs. ExPASy TrEMBL
Match: A0A6J1GI16 (Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.1e-212
Identity = 397/548 (72.45%), Postives = 398/548 (72.63%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH
Sbjct: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDD------------------------------------- 120
           ADSLSDEVCIKLNLHPIRPGRD+                                     
Sbjct: 61  ADSLSDEVCIKLNLHPIRPGRDESVVVSRFGRCDDNGGERDKIESFAKILTSSDANNGGG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FSVPRCCADSVFPPLNYQADPPVQNLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 181 -----------------------------------------------------LEENCSG 240
                                                                LEENCSG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGDCGRWNSQNGGARCSLEENCSG 240

Query: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300
           DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ
Sbjct: 241 DGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQ 300

Query: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV 360
           WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV
Sbjct: 301 WYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYV 360

Query: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 399
           SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN
Sbjct: 361 SPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLN 420

[Close]

BLAST of Carg20554 vs. ExPASy TrEMBL
Match: A0A6J1KHW7 (Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111495939 PE=3 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 1.8e-200
Identity = 381/546 (69.78%), Postives = 386/546 (70.70%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           M+RQLWQAFAGKSVH HTVGSEVYYFVQGHVEQATYIPSLSQSV SNPATKCLVT TDFH
Sbjct: 1   MNRQLWQAFAGKSVHTHTVGSEVYYFVQGHVEQATYIPSLSQSVLSNPATKCLVTSTDFH 60

Query: 61  ADSLSDEVCIKLNLHPIRPGRDD------------------------------------- 120
           ADSLSDEVCIKLNLHPIR G+D+                                     
Sbjct: 61  ADSLSDEVCIKLNLHPIRSGQDESVLVSRFGRCDDNGGERNKIESFAKILTSSDANNGGG 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FSVPRCCADSVFPPLNYRADPPVQTLSITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 180

Query: 181 ---------------------------------------------------LEENCSGDG 240
                                                              LE+NCSGDG
Sbjct: 181 HKKLIAGDSVVFAKNLRGDMFVGIRRASTSITRAIAGGGRWNSQNGGARCSLEKNCSGDG 240

Query: 241 GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY 300
           GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY
Sbjct: 241 GTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWY 300

Query: 301 SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSP 360
           SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEID LQSAKYVSP
Sbjct: 301 SGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDALQSAKYVSP 360

Query: 361 WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN 399
           WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN
Sbjct: 361 WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN 420

[Close]

BLAST of Carg20554 vs. ExPASy TrEMBL
Match: A0A6J1GJ58 (Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.6e-180
Identity = 316/318 (99.37%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 81  RDDLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV 140
           R  LEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV
Sbjct: 174 RCSLEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQV 233

Query: 141 EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE 200
           EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE
Sbjct: 234 EKVNESKNYQWYSGTRVKMAMETEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDE 293

Query: 201 IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST 260
           IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST
Sbjct: 294 IDTLQSAKYVSPWEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDST 353

Query: 261 MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV 320
           MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV
Sbjct: 354 MEQFNPSLLNLNSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMV 413

Query: 321 STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE 380
           STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE
Sbjct: 414 STDLLIGSVQFDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVE 473

Query: 381 NGLENGVSTNDGGKNPNQ 399
           NGLENGVSTNDGGKNPNQ
Sbjct: 474 NGLENGVSTNDGGKNPNQ 491

[Close]

BLAST of Carg20554 vs. ExPASy TrEMBL
Match: A0A6J1BRS8 (Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111005166 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.0e-139
Identity = 288/544 (52.94%), Postives = 322/544 (59.19%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MD +LW+AFAG SV IHTVGS+VYYF QGHVEQ++  P LS+SV SNPATKCLVT   F+
Sbjct: 1   MDPKLWRAFAGNSVQIHTVGSQVYYFTQGHVEQSSSAPCLSRSVLSNPATKCLVTAAHFN 60

Query: 61  ADSLSDEVCIKLNLHPIRPG---------------------------------------- 120
           AD L+DEVCIKLNLHP   G                                        
Sbjct: 61  ADPLTDEVCIKLNLHPFGHGGEVPVLPLAGSDDNGGEGDRVVSFAKILTSSDANNGGGFS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 VPRFCADSIFPPLNYLADPPVQTLSITDVHGVVWNFRHIFRGTPRRHLLTTGWSKFVNNK 180

Query: 181 --------------------------------------------RDDLEENCSGDGGTKV 240
                                                       R   EEN SG+GG +V
Sbjct: 181 KLVAGDSVVFAKNSRGDMFVGIRRATKGNTGGDCGRWHSQIGGVRYSAEENRSGEGGREV 240

Query: 241 FSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTR 300
           FSR  IGKLPAEAVANAAELAAQF+PFE+VYYPRAG SEFVV+ E V+++ +Y W SG R
Sbjct: 241 FSRNGIGKLPAEAVANAAELAAQFRPFEVVYYPRAGWSEFVVKAETVDKALSYYWSSGLR 300

Query: 301 VKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEV 360
           VKMA++TE  SK TWYQGTVTS S+PEHGPW  SPWRML+VTWDE D L SAK V+PWEV
Sbjct: 301 VKMAVDTEDSSKTTWYQGTVTSVSIPEHGPWRNSPWRMLQVTWDETDALLSAKGVNPWEV 360

Query: 361 ELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVD-STMEQFNPSLLNLNSF 399
           E AT   P+QP +H AKKFRGL KSG L GE ELFSP+M F D ST+EQFN SLL+ NSF
Sbjct: 361 EFATAAAPVQPTVHQAKKFRGLQKSGQLTGEEELFSPMMRFGDSSTVEQFNQSLLSFNSF 420

[Close]

BLAST of Carg20554 vs. ExPASy TrEMBL
Match: A0A5A7VER6 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001240 PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 2.3e-139
Identity = 282/546 (51.65%), Postives = 323/546 (59.16%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           MD  LW+AF+G S HIHTVGSEVYYFVQGH+EQATY+P+LS+SV SNP TKC+V+  D+ 
Sbjct: 2   MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSNPTTKCIVSAADYT 61

Query: 61  ADSLSDEVCIKLNLHPIRP----------------------------------------- 120
           AD L+DEVC+K NL+PI P                                         
Sbjct: 62  ADPLTDEVCLKFNLNPIPPGQSVSQVVHPFSGGDDGNGQRNRIEKFAKVLTSSDANNGGG 121

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 122 FSVPRYCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 181

Query: 181 ----------------------------------------------GRDDLEENCSGDGG 240
                                                         GR ++EE  SGD  
Sbjct: 182 HKKLIAGDAVIFARNSNGDMFVGIRRSSKSIGGGDCSKWNSQVGGGGRCNVEEKRSGDRS 241

Query: 241 TKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYS 300
             VF+R NIGK+PAE VA+AAELAA+FKPFE+VYYPR G SEFV+  EKVN S NYQWY 
Sbjct: 242 PAVFTRTNIGKVPAETVAHAAELAAEFKPFEVVYYPRTGTSEFVIPAEKVNNSLNYQWYP 301

Query: 301 GTRVKMAMETEYS-KMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSP 360
           G RVKM +ETE S K  WYQGTVTSASVP HGPW GSPWRMLEVTW+E D LQSAK+VSP
Sbjct: 302 GIRVKMPVETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKFVSP 361

Query: 361 WEVELATPTPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLN 399
           WEVELA+P+PPI PPLH AKK+RG  KSGM+NGEA+LFSP+M F DSTM QFN SLL+ N
Sbjct: 362 WEVELASPSPPIPPPLHSAKKYRGPQKSGMVNGEADLFSPMMRFGDSTMGQFNQSLLSFN 421

[Close]

BLAST of Carg20554 vs. TAIR 10
Match: AT1G77850.1 (auxin response factor 17 )

HSP 1 Score: 197.2 bits (500), Expect = 2.6e-50
Identity = 125/305 (40.98%), Postives = 175/305 (57.38%), Query Frame = 0


Query: 95  KVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSG 154
           K F R   GKL AEAV +A   A+Q  PFE+V+YP AG SEFVV+ E V  S +  W  G
Sbjct: 256 KTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPG 315

Query: 155 TRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPW 214
           TRVKMAMETE  S++TW+QG + S++  E GPW GSPW+ L++TWDE + LQ+ K V+PW
Sbjct: 316 TRVKMAMETEDSSRITWFQG-IVSSTYQETGPWRGSPWKQLQITWDEPEILQNVKRVNPW 375

Query: 215 EVELATPTPPIQPPLHPAKKFR-GLPKSGMLNG-EAELFSPLMNFVDSTMEQFNPSLLNL 274
           +VE+A     +  P  PAK+ +   P  G L+G + E+  P      +     +PS+ + 
Sbjct: 376 QVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSY 435

Query: 275 NSFPAGMQGARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLL-IGSVQ 334
           ++FPAGMQGARQ  F     FNP   +        + + L+    +  VST+++  GS  
Sbjct: 436 STFPAGMQGARQYDFGS---FNPTGFIGGNPPQLFTNNFLSPLPDLGKVSTEMMNFGSPP 495

Query: 335 FDTLSPDSQASVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENG-LENGVST 394
            D LSP+S  + LS       N+   +     VNSIQLFG++I +    E+G  E+G+  
Sbjct: 496 SDNLSPNSNTTNLSSGNDLVGNRGPLSKK---VNSIQLFGKIITVEEHSESGPAESGLCE 553

HSP 2 Score: 57.4 bits (137), Expect = 3.2e-08
Identity = 32/77 (41.56%), Postives = 41/77 (53.25%), Query Frame = 0


Query: 1  MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
          +D  +W+A AG SV I  + S VYYF QGHVE     P LS    S     C++T     
Sbjct: 16 VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHC--CPLLSTLPSSTSPVPCIITSIQLL 75

Query: 61 ADSLSDEVCIKLNLHPI 78
          AD ++DEV   L L P+
Sbjct: 76 ADPVTDEVFAHLILQPM 90

[Close]

BLAST of Carg20554 vs. TAIR 10
Match: AT4G30080.1 (auxin response factor 16 )

HSP 1 Score: 130.2 bits (326), Expect = 3.9e-30
Identity = 101/317 (31.86%), Postives = 146/317 (46.06%), Query Frame = 0


Query: 103 GKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMAME 162
           GK+ AE+V  AA LA   +PFE+VYYPRA  SEF V+      +    W SG R KMA E
Sbjct: 269 GKVTAESVIEAATLAISGRPFEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFE 328

Query: 163 TE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATPT 222
           TE  S+++W+ GTV++ +V +   W  SPWR+L+V WDE D LQ+ K V+PW VEL +  
Sbjct: 329 TEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNV 388

Query: 223 PPIQ-PPLHPAKKFRGLPKSGMLNGEAELFSPLMNFVDSTMEQFNPSLLNLNSFPAGMQG 282
            PI      P +K   LP+    N       P+ +F  + + + +P    L++ P G+QG
Sbjct: 389 HPIPLTSFSPPRKKMRLPQHPDYNNLINSI-PVPSFPSNPLIRSSPLSSVLDNVPVGLQG 448

Query: 283 ARQKLFCESRLFNPCKEMTPLTCDESSMSELNAAKKMQMVSTDLLIGSVQFDTLSPDSQA 342
           AR              +   L+  +     LN        S+  L  S+    +   ++ 
Sbjct: 449 ARHN----------AHQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNIDTKNEK 508

Query: 343 SVLSFATGTAENQNCCNSAKAGVNSIQLFGQVIYMNPPVENGLENG---------VSTND 402
                  GT      CN  K+  + I LFG++I    P E   E G            + 
Sbjct: 509 GFCFLTMGTTP----CNDTKSKKSHIVLFGKLIL---PEEQLSEKGSTDTANIEKTQISS 567

Query: 403 GGKNPNQYLGQGRQEAD 409
           GG N N   G+    +D
Sbjct: 569 GGSNQNGVAGREFSSSD 567

HSP 2 Score: 56.2 bits (134), Expect = 7.2e-08
Identity = 38/109 (34.86%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 1   MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
           +D QLW A AG  V +  + S+V+YF QGH E A             P   C V    + 
Sbjct: 16  LDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNLPIP-PMVLCRVLAIKYM 75

Query: 61  ADSLSDEVCIKLNLHPIRPGRDDLEENCSGDGGTKVFSRRNIGKLPAEA 110
           AD+ SDEV  KL L P++   D+  ++  GDG        N  K P+ A
Sbjct: 76  ADAESDEVFAKLRLIPLKD--DEYVDHEYGDGEDSNGFESNSEKTPSFA 121

[Close]

BLAST of Carg20554 vs. TAIR 10
Match: AT2G28350.1 (auxin response factor 10 )

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-29
Identity = 84/205 (40.98%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 84  LEENCSGDGGTKVFSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKV 143
           ++ N + DG          G++  EAVA A   AA  + FE+VYYPRA   EF V+   V
Sbjct: 253 MKRNGNNDGNAAA-----TGRVRVEAVAEAVARAACGQAFEVVYYPRASTPEFCVKAADV 312

Query: 144 NESKNYQWYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEID 203
             +   +W SG R KMA ETE  S+++W+ GTV++  V +   W  SPWR+L+V WDE D
Sbjct: 313 RSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPD 372

Query: 204 TLQSAKYVSPWEVELATPTPPIQ-PPLHPAKKFR-GLPKSGMLNG-EAELFSPLMNFVDS 263
            LQ+ K VSPW VEL +  P I   P  P KK R   P     +G +  +FSP   F ++
Sbjct: 373 LLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIRIPQPFEFPFHGTKFPIFSP--GFANN 432

Query: 264 TMEQFNPSLLN-LNSFPAGMQGARQ 284
              +    L N  N+ PAG+QGARQ
Sbjct: 433 GGGESMCYLSNDNNNAPAGIQGARQ 450

HSP 2 Score: 60.1 bits (144), Expect = 5.0e-09
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 0


Query: 1  MDRQLWQAFAGKSVHIHTVGSEVYYFVQGHVEQATYIPSLSQSVFSNPATKCLVTGTDFH 60
          +D QLW A AG  V I ++ S V+YF QGH E A + P    +    P   C V    F 
Sbjct: 7  LDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHA-HAPPDFHAPRVPPLILCRVVSVKFL 66

Query: 61 ADSLSDEVCIKLNLHPIRPGRD-DLEEN 88
          AD+ +DEV  K+ L P+ PG D DLE +
Sbjct: 67 ADAETDEVFAKITLLPL-PGNDLDLEND 92

[Close]

BLAST of Carg20554 vs. TAIR 10
Match: ATMG00940.1 (DNA binding )

HSP 1 Score: 99.0 bits (245), Expect = 9.6e-21
Identity = 57/103 (55.34%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 91  DGGTKV-FSRRNIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNY 150
           DG  K  F R   GKL AEAV+ A   AAQ  PFE+VYYP AG S+FVV+ E V  S   
Sbjct: 47  DGSAKKGFRRTGKGKLTAEAVSEAINRAAQGLPFEVVYYPTAGWSDFVVKAEDVEASMAI 106

Query: 151 QWYSGTRVKMAMETE-YSKMTWYQGTVTSASVPEHGPWMGSPW 192
            W  GTRVKMAMETE  S++TW+QG +   +  E GPW GSPW
Sbjct: 107 FWTPGTRVKMAMETEDSSRITWFQG-IVFYTYQETGPWRGSPW 148

[Close]

BLAST of Carg20554 vs. TAIR 10
Match: AT5G20730.2 (Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related )

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-15
Identity = 60/170 (35.29%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 101 NIGKLPAEAVANAAELAAQFKPFELVYYPRAGRSEFVVQVEKVNESKNYQWYSGTRVKMA 160
           +IG L A A ANA        PF + Y PRA  +EFVV + K  ++   Q   G R +M 
Sbjct: 246 HIGVLAAAAHANANN-----SPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMI 305

Query: 161 METEYSKMTWYQGTVTSASVPEHGPWMGSPWRMLEVTWDEIDTLQSAKYVSPWEVELATP 220
            ETE   +  Y GTVT  S  +   W  S WR L++ WDE         VS W++E    
Sbjct: 306 FETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 365

Query: 221 TPPIQPPLHPAKKFRGLPKSGMLNGEAELFSPL---MNFVDSTMEQFNPS 268
              I PP     +F G P  GM + E ++ S L   M ++D+++E  +PS
Sbjct: 366 PFYICPPPFFRPRFSGQP--GMPDDETDMESALKRAMPWLDNSLEMKDPS 408

The following BLAST results are available for this feature:

BLAST of Carg20554 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020200.1	3.0e-242	100.00	Auxin response factor 17, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022951562.1	4.2e-212	72.45	auxin response factor 17-like isoform X1 [Cucurbita moschata] >XP_022951563.1 au...	[more]
XP_023536672.1	1.4e-207	71.35	auxin response factor 17-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001892.1	3.7e-200	69.78	auxin response factor 17-like [Cucurbita maxima]	[more]
XP_022951564.1	9.5e-180	99.37	auxin response factor 17-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg20554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WU6	3.7e-49	40.98	Auxin response factor 17 OS=Arabidopsis thaliana OX=3702 GN=ARF17 PE=2 SV=1	[more]
Q9AV47	1.0e-30	33.22	Auxin response factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF22 PE=2 ...	[more]
Q93YR9	5.5e-29	31.86	Auxin response factor 16 OS=Arabidopsis thaliana OX=3702 GN=ARF16 PE=1 SV=1	[more]
Q9SKN5	4.6e-28	40.98	Auxin response factor 10 OS=Arabidopsis thaliana OX=3702 GN=ARF10 PE=1 SV=1	[more]
Q653H7	6.1e-28	39.11	Auxin response factor 18 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF18 PE=2 ...	[more]

BLAST of Carg20554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI16	2.1e-212	72.45	Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1	[more]
A0A6J1KHW7	1.8e-200	69.78	Auxin response factor OS=Cucurbita maxima OX=3661 GN=LOC111495939 PE=3 SV=1	[more]
A0A6J1GJ58	4.6e-180	99.37	Auxin response factor OS=Cucurbita moschata OX=3662 GN=LOC111454341 PE=3 SV=1	[more]
A0A6J1BRS8	1.0e-139	52.94	Auxin response factor OS=Momordica charantia OX=3673 GN=LOC111005166 PE=3 SV=1	[more]
A0A5A7VER6	2.3e-139	51.65	Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]

BLAST of Carg20554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77850.1	2.6e-50	40.98	auxin response factor 17	[more]
AT4G30080.1	3.9e-30	31.86	auxin response factor 16	[more]
AT2G28350.1	3.3e-29	40.98	auxin response factor 10	[more]
ATMG00940.1	9.6e-21	55.34	DNA binding	[more]
AT5G20730.2	1.2e-15	35.29	Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-relat...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010525	Auxin response factor domain	PFAM	PF06507	Auxin_resp	coord: 113..194 e-value: 7.9E-25 score: 86.9
None	No IPR available	GENE3D	2.30.30.1040		coord: 151..221 e-value: 3.5E-21 score: 76.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..416
None	No IPR available	PANTHER	PTHR31384:SF118	AUXIN RESPONSE FACTOR	coord: 1..82
None	No IPR available	PANTHER	PTHR31384:SF118	AUXIN RESPONSE FACTOR	coord: 90..410
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 90..410
IPR044835	Auxin response factor	PANTHER	PTHR31384	AUXIN RESPONSE FACTOR 4-RELATED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20554-RA	Carg20554-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009725	response to hormone
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding