Carg20523 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20523
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH93-like
Location	Carg_Chr12: 929971 .. 931879 (-)
RNA-Seq Expression	Carg20523
Synteny	Carg20523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACATAATTAAAGAATTAGGCCTTTTCACTTGTGCCTATATATATAAACTCTATCCGCTGCAATTTCTATGCCGTCCAGGTACTTGAGAAAAACCGCCATTAGAGAGGAAGAGAGAAAGCTTGAGGCTGAGAGAGAGATGGAGCTCGATGAACACGGATTCTTAGAGGAGTTGATGGCTCTACGAAGAGAAGCAAATTGGGACGCCATTCCAACTGAAATCACCGATCTCAATGCTTGGGCGTTCGATTACTGTTTTGATCAGAACATTTCTAATTTCAACCCAAATTCTTCATCGGAACCTCTATCGACTCAGAACCTGGATGAATTTTATCATCCTTTGGCAAACGAGTTCTCAGTTCCAGAAATGGCCGATTCCGCCTACGCCGCCATGGAAGTAGCCGCGCCTCTGCCATTTCAAGCAGAGCGTCCGAATGTGGAGGGAGAAGAAGAGGAAGAGGAATTAGGTTTTCTCGCAAACGAGATTCAGAACATGGAGGCGGTTCAAGTTCAATCGGCTTGCAAAGCGGAGCCGAATCAGTCTCCAGAACTCCCCGTTTTCAACATCGGAACATGCGCTCTCGAACGGAAGAACGGACCGAAGAAATTACAAGGCCAACCGTCGAAGAATCTGATGGCTGAAAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCAATGCTCAGATCCATCGTTCCTAAGATCAGCAAGGTAAAAATCAAACATCATCTCTACGAATCTCAATAACAGAAACGCTCGAAATTAATCTCTACGAATCGAAACCGAAATTCCAGAGAGTAATTTTGTTGCCATTAGAACTCGAAATTAATCTGAGAGTCTTGAATCGAAACTGATTTCTGGTATTTGAACAGATGGACCGAACTGCGATTCTAGCAGATGCAATAGATTACATGAAAGAATTGCTGGAGAAGATCGGAAATCTGCAAAGAGAAATGGATCGAACAAATCAAACAACTAGGAATTCATTCCACGACACAAAACCGAGCGAATTCGTAGTGAGAAATTCACCAAAAGTAACTGAACTTTTTTTTGGCTTTGATTTTCAAACAAGCACTCGATTCATTATTGCTGCTGTGAAACTGATTTGGAAAATCGTTGGCGTGCAGTTTGAGGTAGAAAGCAGAAACGGAAACACGAGGATCGAGATTTACTGTGCGGCGAAGCCAGGATTACTGTTATCGACGGTGAATACGATCGAAGCATTGGGGCTTGAGATTCAACACTGTGTAATCAGCTGCTTCAATGACTTCGCATTGCAAGCCACTTGTTCGCAGGTAATTGCTTCTTAATTCCTTTTTCCCCCATCCTCGGCTAACTGTTCATCATTTCTTGTTAATTTTCAGTTTAGTCCTCCATTTTTCCATTAATTTCCCCTCAGGTCCTTTCAAAAGTATATGATCAAATTAATTAAATTGTCAGTTTATTAATATATACGAACTTGCATTTCTAGATAAATTAATTTATTCATGTAAATAATAGAATTCGAATAATATGTTTATTTGTTTGAATATTTTATATAATTTATTATATTCCCCCCCCCCCTTTTTATTATTGTTATTATGCCTATATTTTGTAATTATTAGAAACTAATAACAATTATAATTATTTTGATTTTCTAAAATGGATTTAATTTATTTAATAATTAATTTTGACTTGAAAATAGGAACTGAAGCCTGAAGAATTGAAGGAAGCTTTATTTAGGAATGCAGGCTATGGAGGAAGCTGCTTGTAGAAATTATTTATTTTATTTCTTTTTTTTTCTGCTAAAAAAATTATGTTAATGTTCCTAATTAGAAATTAATTAGTAAGCAAATCTCTGTAATTTAGTGAGGTTTGCAATTTTCTCATCCCAACCCCTATTTCTTAATTTTAATTCAAGTGGGATGATT

mRNA sequence

GACATAATTAAAGAATTAGGCCTTTTCACTTGTGCCTATATATATAAACTCTATCCGCTGCAATTTCTATGCCGTCCAGGTACTTGAGAAAAACCGCCATTAGAGAGGAAGAGAGAAAGCTTGAGGCTGAGAGAGAGATGGAGCTCGATGAACACGGATTCTTAGAGGAGTTGATGGCTCTACGAAGAGAAGCAAATTGGGACGCCATTCCAACTGAAATCACCGATCTCAATGCTTGGGCGTTCGATTACTGTTTTGATCAGAACATTTCTAATTTCAACCCAAATTCTTCATCGGAACCTCTATCGACTCAGAACCTGGATGAATTTTATCATCCTTTGGCAAACGAGTTCTCAGTTCCAGAAATGGCCGATTCCGCCTACGCCGCCATGGAAGTAGCCGCGCCTCTGCCATTTCAAGCAGAGCGTCCGAATGTGGAGGGAGAAGAAGAGGAAGAGGAATTAGGTTTTCTCGCAAACGAGATTCAGAACATGGAGGCGGTTCAAGTTCAATCGGCTTGCAAAGCGGAGCCGAATCAGTCTCCAGAACTCCCCGTTTTCAACATCGGAACATGCGCTCTCGAACGGAAGAACGGACCGAAGAAATTACAAGGCCAACCGTCGAAGAATCTGATGGCTGAAAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCAATGCTCAGATCCATCGTTCCTAAGATCAGCAAGATGGACCGAACTGCGATTCTAGCAGATGCAATAGATTACATGAAAGAATTGCTGGAGAAGATCGGAAATCTGCAAAGAGAAATGGATCGAACAAATCAAACAACTAGGAATTCATTCCACGACACAAAACCGAGCGAATTCGTAGTGAGAAATTCACCAAAAGTAACTGAACTTTTTTTTGGCTTTGATTTTCAAACAAGCACTCGATTCATTATTGCTGCTGTGAAACTGATTTGGAAAATCGTTGGCGTGCAGTTTGAGGTAGAAAGCAGAAACGGAAACACGAGGATCGAGATTTACTGTGCGGCGAAGCCAGGATTACTGTTATCGACGGTGAATACGATCGAAGCATTGGGGCTTGAGATTCAACACTGTGTAATCAGCTGCTTCAATGACTTCGCATTGCAAGCCACTTGTTCGCAGGAACTGAAGCCTGAAGAATTGAAGGAAGCTTTATTTAGGAATGCAGGCTATGGAGGAAGCTGCTTGTAGAAATTATTTATTTTATTTCTTTTTTTTTCTGCTAAAAAAATTATGTTAATGTTCCTAATTAGAAATTAATTAGTAAGCAAATCTCTGTAATTTAGTGAGGTTTGCAATTTTCTCATCCCAACCCCTATTTCTTAATTTTAATTCAAGTGGGATGATT

Coding sequence (CDS)

ATGCCGTCCAGGTACTTGAGAAAAACCGCCATTAGAGAGGAAGAGAGAAAGCTTGAGGCTGAGAGAGAGATGGAGCTCGATGAACACGGATTCTTAGAGGAGTTGATGGCTCTACGAAGAGAAGCAAATTGGGACGCCATTCCAACTGAAATCACCGATCTCAATGCTTGGGCGTTCGATTACTGTTTTGATCAGAACATTTCTAATTTCAACCCAAATTCTTCATCGGAACCTCTATCGACTCAGAACCTGGATGAATTTTATCATCCTTTGGCAAACGAGTTCTCAGTTCCAGAAATGGCCGATTCCGCCTACGCCGCCATGGAAGTAGCCGCGCCTCTGCCATTTCAAGCAGAGCGTCCGAATGTGGAGGGAGAAGAAGAGGAAGAGGAATTAGGTTTTCTCGCAAACGAGATTCAGAACATGGAGGCGGTTCAAGTTCAATCGGCTTGCAAAGCGGAGCCGAATCAGTCTCCAGAACTCCCCGTTTTCAACATCGGAACATGCGCTCTCGAACGGAAGAACGGACCGAAGAAATTACAAGGCCAACCGTCGAAGAATCTGATGGCTGAAAGAAGGAGAAGGAAGCGCTTGAACGATCGCCTCTCAATGCTCAGATCCATCGTTCCTAAGATCAGCAAGATGGACCGAACTGCGATTCTAGCAGATGCAATAGATTACATGAAAGAATTGCTGGAGAAGATCGGAAATCTGCAAAGAGAAATGGATCGAACAAATCAAACAACTAGGAATTCATTCCACGACACAAAACCGAGCGAATTCGTAGTGAGAAATTCACCAAAAGTAACTGAACTTTTTTTTGGCTTTGATTTTCAAACAAGCACTCGATTCATTATTGCTGCTGTGAAACTGATTTGGAAAATCGTTGGCGTGCAGTTTGAGGTAGAAAGCAGAAACGGAAACACGAGGATCGAGATTTACTGTGCGGCGAAGCCAGGATTACTGTTATCGACGGTGAATACGATCGAAGCATTGGGGCTTGAGATTCAACACTGTGTAATCAGCTGCTTCAATGACTTCGCATTGCAAGCCACTTGTTCGCAGGAACTGAAGCCTGAAGAATTGAAGGAAGCTTTATTTAGGAATGCAGGCTATGGAGGAAGCTGCTTGTAG

Protein sequence

MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFDYCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL

Homology

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BLAST of Carg20523 vs. NCBI nr
Match: KAG7020231.1 (Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 740.0 bits (1909), Expect = 1.0e-209
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 377

[Close]

BLAST of Carg20523 vs. NCBI nr
Match: KAG6585313.1 (Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 661.4 bits (1705), Expect = 4.7e-186
Identity = 345/377 (91.51%), Postives = 345/377 (91.51%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISN NPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNVNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFVVRNSPK                               F
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPK-------------------------------F 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 346

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 346

[Close]

BLAST of Carg20523 vs. NCBI nr
Match: XP_022950965.1 (transcription factor bHLH93-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 657.9 bits (1696), Expect = 5.2e-185
Identity = 343/377 (90.98%), Postives = 343/377 (90.98%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRY RKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYFRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISN NPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNVNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAV VQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVHVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFVVRNSPK                               F
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPK-------------------------------F 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 346

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 346

[Close]

BLAST of Carg20523 vs. NCBI nr
Match: XP_022950966.1 (transcription factor bHLH61-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 643.3 bits (1658), Expect = 1.3e-180
Identity = 337/377 (89.39%), Postives = 337/377 (89.39%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRY RKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYFRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISN NPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNVNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAV VQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVHVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFV                                     F
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFV-------------------------------------F 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 340

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 340

[Close]

BLAST of Carg20523 vs. NCBI nr
Match: XP_023002803.1 (transcription factor bHLH93-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 607.4 bits (1565), Expect = 8.1e-170
Identity = 314/354 (88.70%), Postives = 318/354 (89.83%), Query Frame = 0


Query: 24  MELDEHGFLEELMALRREANWDAIPTEITDLNAWAFDYCFDQNISNFNPNSSSEPLSTQN 83
           MELDEHGFLEELMALRREANWDAIPTE+ DLNAWAFDYCFD NISNFNPNSSSEPLSTQN
Sbjct: 1   MELDEHGFLEELMALRREANWDAIPTEMADLNAWAFDYCFDHNISNFNPNSSSEPLSTQN 60

Query: 84  LDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 143
           LDEFYHPLANEFS P+MADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME
Sbjct: 61  LDEFYHPLANEFSAPQMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 120

Query: 144 AVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 203
           AVQVQSACKAEP QSPELPVFNIGTC+LERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS
Sbjct: 121 AVQVQSACKAEPIQSPELPVFNIGTCSLERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 180

Query: 204 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVV 263
           MLRSIVPKISKMDRTAILADAIDYMKELLEKIG+LQREMDRTNQTTRNSFHDTKPSE VV
Sbjct: 181 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGSLQREMDRTNQTTRNSFHDTKPSELVV 240

Query: 264 RNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLL 323
           RNSPK                               FEVESRNGNTRIEIYCAAKPGLLL
Sbjct: 241 RNSPK-------------------------------FEVESRNGNTRIEIYCAAKPGLLL 300

Query: 324 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 378
           STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL
Sbjct: 301 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 323

[Close]

BLAST of Carg20523 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 8.4e-53
Identity = 146/343 (42.57%), Postives = 191/343 (55.69%), Query Frame = 0


Query: 55  NAWAFDY-CFDQNISNFN----PNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAME 114
           N +  DY CF+    + N    P+S  + +S       + P   +   P ++ SA A   
Sbjct: 45  NGYNIDYLCFNNEEEDENTLLYPSSFMDLISQPPPLLLHQPPPLQPLSPPLSSSATAGAT 104

Query: 115 VAAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTC 174
              P   +A +  ++       L     + +N        +   E +QS     F++G C
Sbjct: 105 FDYPF-LEALQEIIDSSSSSPPLILQNGQEENFNNPMSYPSPLMESDQSKS---FSVGYC 164

Query: 175 ALE-RKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYM 234
             E  K   KKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL DAIDYM
Sbjct: 165 GGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 224

Query: 235 KELLEKIGNLQREMDRTNQTTRNSFH--------DTKPSEFVVRNSPKVTELFFGFDFQT 294
           KELL+KI  LQ E ++    + NS H        D   +E +VRNSPK            
Sbjct: 225 KELLDKINKLQDE-EQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK------------ 284

Query: 295 STRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCV 354
                              FE++ R+ +TR++I C+ KPGLLLSTVNT+E LGLEI+ CV
Sbjct: 285 -------------------FEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCV 344

Query: 355 ISCFNDFALQATCSQE------LKPEELKEALFRNAGYGGSCL 378
           ISCF+DF+LQA+CS+       +  E++K+ALFRNAGYGGSCL
Sbjct: 345 ISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGGSCL 351

[Close]

BLAST of Carg20523 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.0e-45
Identity = 135/333 (40.54%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 55  NAWAFDY-CFD---QNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEV 114
           N W FDY CF+   Q   N +  SSS   S  NL     PL ++   P+ +   Y +  +
Sbjct: 32  NDWNFDYLCFNNLLQEDDNIDHPSSS---SLMNLISQPPPLLHQ--PPQPSSPLYDSPPL 91

Query: 115 AAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCA 174
           ++   +      +        L   A++         ++     P         +IG   
Sbjct: 92  SSAFDYPFLEDIIHSSYSPPPLILPASQ---------ENTNNYSPLMEESKSFISIGETN 151

Query: 175 LERKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKE 234
            +R N  KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAIDYMKE
Sbjct: 152 KKRSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKE 211

Query: 235 LLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVK 294
           LL+KI  LQ +       +  S   T  +E +VRNS                        
Sbjct: 212 LLDKINKLQEDEQELGSNSHLSTLIT--NESMVRNS------------------------ 271

Query: 295 LIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQ 354
                  ++FEV+ R  NT I+I C  KPGL++STV+T+E LGLEI+ CVISCF+DF+LQ
Sbjct: 272 -------LKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQ 315

Query: 355 ATCSQ------ELKPEELKEALFRNAGYGGSCL 378
           A+C +       +  E  K+AL RNAGYGG CL
Sbjct: 332 ASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Carg20523 vs. ExPASy Swiss-Prot
Match: Q10S44 (Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.1e-44
Identity = 150/395 (37.97%), Postives = 196/395 (49.62%), Query Frame = 0


Query: 24  MELDEHGFLEELMALRRE--ANWDAIP------------TEITDLNAWAFDYCFDQNISN 83
           MELDE  FL+ELM+LRR+  A W A P              ++DL  +  D    +    
Sbjct: 1   MELDEESFLDELMSLRRDGSAPWQAPPYPGGGGGGGGGGMMMSDLLFYGGDGGSAEARGG 60

Query: 84  FNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEE 143
            + +   E L++       HP   EF+   +++         A L      P+    + +
Sbjct: 61  MDASPFQE-LASMAAPPPQHP-HEEFNFDCLSEVCNPYRSCGAQLV-----PSEAASQTQ 120

Query: 144 EELGFLANEIQNMEAVQVQSACKA--EPNQSPELPVFNIGTCALERK------------- 203
            +L  L +    M A +  S  KA          P F  G  A E               
Sbjct: 121 TQLTPLRDA---MVAEEETSGDKALLHGGGGSSSPTFMFGGGAGESSEMMAGIRGVGGGV 180

Query: 204 NGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEK 263
           +   KL G PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL D IDY+KEL E+
Sbjct: 181 HPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTER 240

Query: 264 IGNLQREMDRTNQ-----TTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAV 323
           I  L+ E+  T +      T         +E +VRNS K                     
Sbjct: 241 IKTLEEEIGVTPEELDLLNTMKDSSSGNNNEMLVRNSTK--------------------- 300

Query: 324 KLIWKIVGVQFEVESR-NGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFA 378
                     F+VE+R +GNTRIEI C A PG+LLSTV+ +E LGLEI+ CV+SCF+DF 
Sbjct: 301 ----------FDVENRGSGNTRIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFG 354

[Close]

BLAST of Carg20523 vs. ExPASy Swiss-Prot
Match: Q336V8 (Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH004 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-41
Identity = 120/260 (46.15%), Postives = 154/260 (59.23%), Query Frame = 0


Query: 144 AVQVQSACKAE-----PNQSPEL-PVFNIG-----TCALERKNGPKKLQGQPSKNLMAER 203
           AV+ +  CKA         S EL P+F  G       ++  ++      G PSKNLMAER
Sbjct: 143 AVEEEERCKARRGAGGGGDSGELAPMFVFGGGGGAAASVRPRSCRPPQPGAPSKNLMAER 202

Query: 204 RRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREM---DRTNQTT 263
           RRRKRLNDRLSMLRS+VP+ISKMDRT+IL D I Y+KEL+++I NLQ E    D ++ +T
Sbjct: 203 RRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSST 262

Query: 264 RN----SFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESR 323
            N      +  KP      +S + T L      + STR                FEVE R
Sbjct: 263 ENLSMLKLNTLKPPP--SSSSGEETPL-----IRNSTR----------------FEVERR 322

Query: 324 -NGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELK------ 378
            NG+TRIE+ CAA P LL ST+  +EALG+EI+ CVISCF+DFA+QA+C Q+ K      
Sbjct: 323 ENGSTRIEMACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQDDKKREMTR 379

[Close]

BLAST of Carg20523 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.9e-35
Identity = 93/210 (44.29%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 176 GPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKI 235
           G  K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I
Sbjct: 297 GKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356

Query: 236 GNLQREMDRTN----QTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKL 295
            +L  E++ T       T +SFH   P+   +  S +V E        +           
Sbjct: 357 NDLHNELESTPPGSLPPTSSSFHPLTPTPQTL--SCRVKEELCPSSLPSP---------- 416

Query: 296 IWKIVGVQFEVESRNGN-TRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFAL- 355
             K    + EV  R G    I ++C  +PGLLL+T+  ++ LGL++Q  VISCFN FAL 
Sbjct: 417 --KGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 476

Query: 356 -----QATCSQELKPEELKEALFRNAGYGG 375
                Q    QE+ P+++K  LF  AGY G
Sbjct: 477 VFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg20523 vs. ExPASy TrEMBL
Match: A0A6J1GH95 (transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453960 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.5e-185
Identity = 343/377 (90.98%), Postives = 343/377 (90.98%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRY RKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYFRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISN NPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNVNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAV VQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVHVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFVVRNSPK                               F
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPK-------------------------------F 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 346

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 346

[Close]

BLAST of Carg20523 vs. ExPASy TrEMBL
Match: A0A6J1GG97 (transcription factor bHLH61-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453960 PE=4 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 6.5e-181
Identity = 337/377 (89.39%), Postives = 337/377 (89.39%), Query Frame = 0


Query: 1   MPSRYLRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60
           MPSRY RKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD
Sbjct: 1   MPSRYFRKTAIREEERKLEAEREMELDEHGFLEELMALRREANWDAIPTEITDLNAWAFD 60

Query: 61  YCFDQNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120
           YCFDQNISN NPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER
Sbjct: 61  YCFDQNISNVNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAER 120

Query: 121 PNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180
           PNVEGEEEEEELGFLANEIQNMEAV VQSACKAEPNQSPELPVFNIGTCALERKNGPKKL
Sbjct: 121 PNVEGEEEEEELGFLANEIQNMEAVHVQSACKAEPNQSPELPVFNIGTCALERKNGPKKL 180

Query: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240
           QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR
Sbjct: 181 QGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQR 240

Query: 241 EMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQF 300
           EMDRTNQTTRNSFHDTKPSEFV                                     F
Sbjct: 241 EMDRTNQTTRNSFHDTKPSEFV-------------------------------------F 300

Query: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 360
           EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE
Sbjct: 301 EVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQELKPE 340

Query: 361 ELKEALFRNAGYGGSCL 378
           ELKEALFRNAGYGGSCL
Sbjct: 361 ELKEALFRNAGYGGSCL 340

[Close]

BLAST of Carg20523 vs. ExPASy TrEMBL
Match: A0A6J1KUM9 (transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496559 PE=4 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 3.9e-170
Identity = 314/354 (88.70%), Postives = 318/354 (89.83%), Query Frame = 0


Query: 24  MELDEHGFLEELMALRREANWDAIPTEITDLNAWAFDYCFDQNISNFNPNSSSEPLSTQN 83
           MELDEHGFLEELMALRREANWDAIPTE+ DLNAWAFDYCFD NISNFNPNSSSEPLSTQN
Sbjct: 1   MELDEHGFLEELMALRREANWDAIPTEMADLNAWAFDYCFDHNISNFNPNSSSEPLSTQN 60

Query: 84  LDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 143
           LDEFYHPLANEFS P+MADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME
Sbjct: 61  LDEFYHPLANEFSAPQMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 120

Query: 144 AVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 203
           AVQVQSACKAEP QSPELPVFNIGTC+LERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS
Sbjct: 121 AVQVQSACKAEPIQSPELPVFNIGTCSLERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 180

Query: 204 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVV 263
           MLRSIVPKISKMDRTAILADAIDYMKELLEKIG+LQREMDRTNQTTRNSFHDTKPSE VV
Sbjct: 181 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGSLQREMDRTNQTTRNSFHDTKPSELVV 240

Query: 264 RNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLL 323
           RNSPK                               FEVESRNGNTRIEIYCAAKPGLLL
Sbjct: 241 RNSPK-------------------------------FEVESRNGNTRIEIYCAAKPGLLL 300

Query: 324 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 378
           STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL
Sbjct: 301 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 323

[Close]

BLAST of Carg20523 vs. ExPASy TrEMBL
Match: A0A6J1KRH7 (transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496559 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 7.7e-166
Identity = 308/354 (87.01%), Postives = 312/354 (88.14%), Query Frame = 0


Query: 24  MELDEHGFLEELMALRREANWDAIPTEITDLNAWAFDYCFDQNISNFNPNSSSEPLSTQN 83
           MELDEHGFLEELMALRREANWDAIPTE+ DLNAWAFDYCFD NISNFNPNSSSEPLSTQN
Sbjct: 1   MELDEHGFLEELMALRREANWDAIPTEMADLNAWAFDYCFDHNISNFNPNSSSEPLSTQN 60

Query: 84  LDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 143
           LDEFYHPLANEFS P+MADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME
Sbjct: 61  LDEFYHPLANEFSAPQMADSAYAAMEVAAPLPFQAERPNVEGEEEEEELGFLANEIQNME 120

Query: 144 AVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 203
           AVQVQSACKAEP QSPELPVFNIGTC+LERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS
Sbjct: 121 AVQVQSACKAEPIQSPELPVFNIGTCSLERKNGPKKLQGQPSKNLMAERRRRKRLNDRLS 180

Query: 204 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVV 263
           MLRSIVPKISKMDRTAILADAIDYMKELLEKIG+LQREMDRTNQTTRNSFHDTKPSE V 
Sbjct: 181 MLRSIVPKISKMDRTAILADAIDYMKELLEKIGSLQREMDRTNQTTRNSFHDTKPSELV- 240

Query: 264 RNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLL 323
                                               FEVESRNGNTRIEIYCAAKPGLLL
Sbjct: 241 ------------------------------------FEVESRNGNTRIEIYCAAKPGLLL 300

Query: 324 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 378
           STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL
Sbjct: 301 STVNTIEALGLEIQHCVISCFNDFALQATCSQELKPEELKEALFRNAGYGGSCL 317

[Close]

BLAST of Carg20523 vs. ExPASy TrEMBL
Match: A0A6J1BPT9 (transcription factor bHLH93-like OS=Momordica charantia OX=3673 GN=LOC111004555 PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.8e-143
Identity = 283/366 (77.32%), Postives = 304/366 (83.06%), Query Frame = 0


Query: 24  MELDEHGFLEELMALRREANWDAIPTEITDL--NAWAFDYCFDQNISNFNPNSSSEPLST 83
           MELDEH F+EEL+ALRREANWDAIPTEI+DL   AW+FDYCFDQ+ +NF+ NSSSE LS 
Sbjct: 1   MELDEHVFMEELLALRREANWDAIPTEISDLCSTAWSFDYCFDQSTANFHQNSSSEALSA 60

Query: 84  QNLDEFYHPLANEFSVPEMADSAYAAMEVAAPLPFQAERPNV----EGEEEEEELGFLAN 143
           QNLDEFYHPLA+EFSVP++ADSAYAAMEVAAPLPFQA+RP+     EGE EEEELGFLA+
Sbjct: 61  QNLDEFYHPLASEFSVPQVADSAYAAMEVAAPLPFQADRPSAEREGEGEVEEEELGFLAD 120

Query: 144 EIQNMEAVQVQSACKAEPNQSPELPVFNIGTCALERKNGPKKLQGQPSKNLMAERRRRKR 203
           EIQNME VQVQSACK EPN SPE+PVFNIGTC+LERKN PKKLQGQPSKNLMAERRRRKR
Sbjct: 121 EIQNME-VQVQSACKMEPNLSPEIPVFNIGTCSLERKNRPKKLQGQPSKNLMAERRRRKR 180

Query: 204 LNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKIGNLQREMDRTNQTTRNSFHDTK 263
           LNDRLSMLRSIVPKISKMDRTAILADAI+YMKELLEKIGNLQRE+DR+NQT  NSF+DTK
Sbjct: 181 LNDRLSMLRSIVPKISKMDRTAILADAIEYMKELLEKIGNLQREVDRSNQT--NSFNDTK 240

Query: 264 PSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAA 323
           PSEFVVRNSPK                               FEVES NG+TRIEI CAA
Sbjct: 241 PSEFVVRNSPK-------------------------------FEVESGNGSTRIEICCAA 300

Query: 324 KPGLLLSTVNTIEALGLEIQHCVISCFNDFALQATCSQEL------KPEELKEALFRNAG 378
           KPGLLLSTVNTIEALGLEIQ CVISCFNDFALQATCS+EL      KP ELKEALFRNAG
Sbjct: 301 KPGLLLSTVNTIEALGLEIQQCVISCFNDFALQATCSEELKQKAERKPGELKEALFRNAG 332

[Close]

BLAST of Carg20523 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 209.1 bits (531), Expect = 6.0e-54
Identity = 146/343 (42.57%), Postives = 191/343 (55.69%), Query Frame = 0


Query: 55  NAWAFDY-CFDQNISNFN----PNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAME 114
           N +  DY CF+    + N    P+S  + +S       + P   +   P ++ SA A   
Sbjct: 45  NGYNIDYLCFNNEEEDENTLLYPSSFMDLISQPPPLLLHQPPPLQPLSPPLSSSATAGAT 104

Query: 115 VAAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTC 174
              P   +A +  ++       L     + +N        +   E +QS     F++G C
Sbjct: 105 FDYPF-LEALQEIIDSSSSSPPLILQNGQEENFNNPMSYPSPLMESDQSKS---FSVGYC 164

Query: 175 ALE-RKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYM 234
             E  K   KKL+GQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRT+IL DAIDYM
Sbjct: 165 GGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYM 224

Query: 235 KELLEKIGNLQREMDRTNQTTRNSFH--------DTKPSEFVVRNSPKVTELFFGFDFQT 294
           KELL+KI  LQ E ++    + NS H        D   +E +VRNSPK            
Sbjct: 225 KELLDKINKLQDE-EQELGNSNNSHHSKLFGDLKDLNANEPLVRNSPK------------ 284

Query: 295 STRFIIAAVKLIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCV 354
                              FE++ R+ +TR++I C+ KPGLLLSTVNT+E LGLEI+ CV
Sbjct: 285 -------------------FEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCV 344

Query: 355 ISCFNDFALQATCSQE------LKPEELKEALFRNAGYGGSCL 378
           ISCF+DF+LQA+CS+       +  E++K+ALFRNAGYGGSCL
Sbjct: 345 ISCFSDFSLQASCSEGAEQRDFITSEDIKQALFRNAGYGGSCL 351

[Close]

BLAST of Carg20523 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 7.1e-47
Identity = 135/333 (40.54%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 55  NAWAFDY-CFD---QNISNFNPNSSSEPLSTQNLDEFYHPLANEFSVPEMADSAYAAMEV 114
           N W FDY CF+   Q   N +  SSS   S  NL     PL ++   P+ +   Y +  +
Sbjct: 32  NDWNFDYLCFNNLLQEDDNIDHPSSS---SLMNLISQPPPLLHQ--PPQPSSPLYDSPPL 91

Query: 115 AAPLPFQAERPNVEGEEEEEELGFLANEIQNMEAVQVQSACKAEPNQSPELPVFNIGTCA 174
           ++   +      +        L   A++         ++     P         +IG   
Sbjct: 92  SSAFDYPFLEDIIHSSYSPPPLILPASQ---------ENTNNYSPLMEESKSFISIGETN 151

Query: 175 LERKNGPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKE 234
            +R N  KKL+GQPSKNLMAERRRRKRLNDRLS+LRSIVPKI+KMDRT+IL DAIDYMKE
Sbjct: 152 KKRSN--KKLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKE 211

Query: 235 LLEKIGNLQREMDRTNQTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVK 294
           LL+KI  LQ +       +  S   T  +E +VRNS                        
Sbjct: 212 LLDKINKLQEDEQELGSNSHLSTLIT--NESMVRNS------------------------ 271

Query: 295 LIWKIVGVQFEVESRNGNTRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFALQ 354
                  ++FEV+ R  NT I+I C  KPGL++STV+T+E LGLEI+ CVISCF+DF+LQ
Sbjct: 272 -------LKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQ 315

Query: 355 ATCSQ------ELKPEELKEALFRNAGYGGSCL 378
           A+C +       +  E  K+AL RNAGYGG CL
Sbjct: 332 ASCFEVGEQRYMVTSEATKQALIRNAGYGGRCL 315

[Close]

BLAST of Carg20523 vs. TAIR 10
Match: AT3G26744.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-36
Identity = 93/210 (44.29%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 176 GPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKI 235
           G  K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I
Sbjct: 297 GKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356

Query: 236 GNLQREMDRTN----QTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKL 295
            +L  E++ T       T +SFH   P+   +  S +V E        +           
Sbjct: 357 NDLHNELESTPPGSLPPTSSSFHPLTPTPQTL--SCRVKEELCPSSLPSP---------- 416

Query: 296 IWKIVGVQFEVESRNGN-TRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFAL- 355
             K    + EV  R G    I ++C  +PGLLL+T+  ++ LGL++Q  VISCFN FAL 
Sbjct: 417 --KGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 476

Query: 356 -----QATCSQELKPEELKEALFRNAGYGG 375
                Q    QE+ P+++K  LF  AGY G
Sbjct: 477 VFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg20523 vs. TAIR 10
Match: AT3G26744.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-36
Identity = 93/210 (44.29%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 176 GPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKI 235
           G  K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I
Sbjct: 297 GKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356

Query: 236 GNLQREMDRTN----QTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKL 295
            +L  E++ T       T +SFH   P+   +  S +V E        +           
Sbjct: 357 NDLHNELESTPPGSLPPTSSSFHPLTPTPQTL--SCRVKEELCPSSLPSP---------- 416

Query: 296 IWKIVGVQFEVESRNGN-TRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFAL- 355
             K    + EV  R G    I ++C  +PGLLL+T+  ++ LGL++Q  VISCFN FAL 
Sbjct: 417 --KGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 476

Query: 356 -----QATCSQELKPEELKEALFRNAGYGG 375
                Q    QE+ P+++K  LF  AGY G
Sbjct: 477 VFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

[Close]

BLAST of Carg20523 vs. TAIR 10
Match: AT3G26744.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 149.4 bits (376), Expect = 5.6e-36
Identity = 93/210 (44.29%), Postives = 123/210 (58.57%), Query Frame = 0


Query: 176 GPKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIDYMKELLEKI 235
           G  K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR +IL DAIDY+KELL++I
Sbjct: 297 GKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRI 356

Query: 236 GNLQREMDRTN----QTTRNSFHDTKPSEFVVRNSPKVTELFFGFDFQTSTRFIIAAVKL 295
            +L  E++ T       T +SFH   P+   +  S +V E        +           
Sbjct: 357 NDLHNELESTPPGSLPPTSSSFHPLTPTPQTL--SCRVKEELCPSSLPSP---------- 416

Query: 296 IWKIVGVQFEVESRNGN-TRIEIYCAAKPGLLLSTVNTIEALGLEIQHCVISCFNDFAL- 355
             K    + EV  R G    I ++C  +PGLLL+T+  ++ LGL++Q  VISCFN FAL 
Sbjct: 417 --KGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALD 476

Query: 356 -----QATCSQELKPEELKEALFRNAGYGG 375
                Q    QE+ P+++K  LF  AGY G
Sbjct: 477 VFRAEQCQEGQEILPDQIKAVLFDTAGYAG 492

The following BLAST results are available for this feature:

BLAST of Carg20523 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020231.1	1.0e-209	100.00	Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585313.1	4.7e-186	91.51	Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma ...	[more]
XP_022950965.1	5.2e-185	90.98	transcription factor bHLH93-like isoform X1 [Cucurbita moschata]	[more]
XP_022950966.1	1.3e-180	89.39	transcription factor bHLH61-like isoform X2 [Cucurbita moschata]	[more]
XP_023002803.1	8.1e-170	88.70	transcription factor bHLH93-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg20523 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSL1	8.4e-53	42.57	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]
Q9LXA9	1.0e-45	40.54	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q10S44	1.1e-44	37.97	Transcription factor BHLH3 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH3 PE=...	[more]
Q336V8	1.5e-41	46.15	Basic helix-loop-helix protein 004 OS=Oryza sativa subsp. japonica OX=39947 GN=B...	[more]
Q9LSE2	7.9e-35	44.29	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]

BLAST of Carg20523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH95	2.5e-185	90.98	transcription factor bHLH93-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1GG97	6.5e-181	89.39	transcription factor bHLH61-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KUM9	3.9e-170	88.70	transcription factor bHLH93-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1KRH7	7.7e-166	87.01	transcription factor bHLH93-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1BPT9	1.8e-143	77.32	transcription factor bHLH93-like OS=Momordica charantia OX=3673 GN=LOC111004555 ...	[more]

BLAST of Carg20523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65640.1	6.0e-54	42.57	beta HLH protein 93	[more]
AT5G10570.1	7.1e-47	40.54	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.1	5.6e-36	44.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.2	5.6e-36	44.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G26744.4	5.6e-36	44.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..28
None	No IPR available	COILS	Coil	Coil	coord: 125..145
None	No IPR available	COILS	Coil	Coil	coord: 221..248
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 26..377
None	No IPR available	PANTHER	PTHR31945:SF72	DNA BINDING PROTEIN	coord: 26..377
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 309..350 e-value: 2.70193E-5 score: 39.8389
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 188..237 e-value: 8.8E-12 score: 55.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 188..231 e-value: 7.6E-10 score: 38.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 182..231 score: 15.256057
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 178..248 e-value: 6.8E-14 score: 53.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 186..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20523-RA	Carg20523-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0015276	ligand-gated ion channel activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0038023	signaling receptor activity