
Carg20511 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCGCGTTCTTCTCTTGCGACACATGCCTAATTGGAACGGTATTTCACGGACTCGCTCGGATTTCGTTTTTACTCCTTGCTCTCTTGTTCTCTCGCACCGGCCACTACAAACCCAAGATGCAGTCGCTCAATTTTTTTTTTTACCAGGAAAGGTTTATTCGGCTGAGTCCGACGCAGGGATTCGAGCCCAGCGCTGAGCTTCGATGATGGAATGAAGGTCTTTCTGCCTACTGAATTCTTCAAAAACAAATTCGTTGTCCATTTTGTAACGAGTGGATTTCTTAATTTCTCTTTTGTTTTCTCGTCCCTTTTTTTGTGCATAATCAGCAAAGTTACGGAGCCTTTTTAATCGTTGATTCTGTGGTTGGATTTTGCTTGTCATTCCTTTATGATGACTCAGATGTGCTAATATTGTGGCCAGTTTTTGCCTGTCATTCTTGATTGGCTTACCTGAATCTCTACTTCGTATGTCTTTTATCTATAATTTTGATTCTCATTTAGCAACACCAAAACTGAGCTCTGCTCTCCGAGTCTTATCTGTGGCATATAGAAATGATATGAAATTTAACTTCGAAAGAATTCCAGAGGGGAGAGGGAAACCAAATCAGGGATTCGGTACTTCAAAGTGATTTGAAACCAGGATCTTACATGTGACCTAGTGATGACCAAAACAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGGTTGGTCATCTTAATTTCATTTGGAATGAATACTTTTAAAAACTTTGTCTGTGGAATAGAAATCGAGAGAGAATGAACATTTTATTATCACTAAACCTGTAAATTCTAGACTGGATTAAAATTTAATTTTGAAAAAAATATTTTACATGATTTTATTTTATTTATTTATTTCTGGTTGCAGCCTCAGCTCAAGGGACTAGCAAGTGATGGTCAGACATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTGCTTAATATCAGGATAGAAGGACGTGCTTTCCATTGTAGACCTGATGTTCATTCCTGTTGTGAACTTGGTGTTATAAATTAAAAAATGGCCTTGCAAGATCCCCCCCCCCCCCCTCCCCCCCCCCCAAATTCATTTCATGAAGTGCACTGTCGATCAGGTGTTATGTGTGATGAATCTAAAATTAACATGGGCAAGCTTAAGCTCTCAATCTGGTTCAGTTGGGATTTCGTTAAATTGACCTGACCATTTCCATTTCATTGATCGAGTTTAAATGAGGCTCTTTGCAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGTAAGTTACACATTTTCATTTACAATTCCATTCAATATTTTATTGATTGTCAGAATCAAACATTTGTACCACTCTTCTTTATTGGTTATCAAAACAAACCAATGATTGAGGAAGTGAGGGGGGAACTATGGTAATTTCATGTAGTCCTTCTAAATCCACATGCTTAACTTTGGCGCTGAGGTACATCCTTCGCAGTGTTCGAATCTTGGCTGGGTTTGGATGGGGAAAAGAAATTAAATTCGAAAGCAGTTTGGAAGATGTAGTATTTTGTAAACTTGCTGAAAGTTGTGTTAGTTTTTTTCCAAGTCTTTTAAAATGATAATTTCATCATGTGTTGTTTGTTTATTATAATTACCTTATTTCATTAATTCTTCTTCTGTAATATTTAAATTTTAGTGTAGTGCTTCCCATCAAAACTTGTAAATAAATTTTAGACTACGTTATTTATAAACCACAAAACAAAAGGAATACAAGCTATAGTCTAGAGGCTTTTGATGGACACTCCAACAGAAAGTGTATGCCACACAAAATCACAAAACTATTTTTGGAATTCTCAAGAAAACCTCTGTTTTCTGTCTATCCAGATACGTGCCGAAATACATATAAAATCAGCTATCGTTCTGCATCCTGTTGTAGCTATACCATCTGCTGAGTTTAGAAAATTAATGTCTGTTTTAGGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGGTAAGCACTTGGCACTTTCTTTTGCGCGCTACCTTTCAGTAGAATATACAGACATTTCTAGGATATTTTATAGGAAGCAAGCAGATTCTCAGTTTAGCGCAAGTATGAAATGATATATGTATTTACTTTCAGTTCTTTATTTGAATATTTGCTTGTTCAATATGGTCATATCTTGTGACTTGGATGATGATTATCTGCCTCGCAATGAAAGATTGATGAAAAGGAAATTTCTTGTTTCTTATGATCAATTTAATGATCTGGTTAGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCGGACAAAACCAAAGAATTTGGAAGATTATAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTAATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTTCAAAGTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGAATAATCCTTTTTAAACCTATATTATGTATTACACTCTCATTTTCTTTGTTCTCTCTCCAGCTAATGAGATGACAATCTTGAATTTGCATCATATTCTGCATAGTCTGAAATATCTAGATCAGCCCTCACAGCCTCTGGACAGGGAGCTTGTGCTGTGA AACTCGCGTTCTTCTCTTGCGACACATGCCTAATTGGAACGGTATTTCACGGACTCGCTCGGATTTCGTTTTTACTCCTTGCTCTCTTGTTCTCTCGCACCGGCCACTACAAACCCAAGATGCAGTCGCTCAATTTTTTTTTTTACCAGGAAAGGTTTATTCGGCTGAGTCCGACGCAGGGATTCGAGCCCAGCGCTGAGCTTCGATGATGGAATGAAGGTCTTTCTGCCTACTGAATTCTTCAAAAACAAATTCGTTGTCCATTTTGTAACGAGTGGATTTCTTAATTTCTCTTTTGTTTTCTCGTCCCTTTTTTTGTGCATAATCAGCAAAGTTACGGAGCCTTTTTAATCGTTGATTCTGTGGTTGGATTTTGCTTGTCATTCCTTTATGATGACTCAGATGTGCTAATATTGTGGCCAGTTTTTGCCTGTCATTCTTGATTGGCTTACCTGAATCTCTACTTCGTATGTCTTTTATCTATAATTTTGATTCTCATTTAGCAACACCAAAACTGAGCTCTGCTCTCCGAGTCTTATCTGTGGCATATAGAAATGATATGAAATTTAACTTCGAAAGAATTCCAGAGGGGAGAGGGAAACCAAATCAGGGATTCGGTACTTCAAAGTGATTTGAAACCAGGATCTTACATGTGACCTAGTGATGACCAAAACAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGCCTCAGCTCAAGGGACTAGCAAGTGATGGTCAGACATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCGGACAAAACCAAAGAATTTGGAAGATTATAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTAATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTTCAAAGTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGAATAATCCTTTTTAAACCTATATTATGTATTACACTCTCATTTTCTTTGTTCTCTCTCCAGCTAATGAGATGACAATCTTGAATTTGCATCATATTCTGCATAGTCTGAAATATCTAGATCAGCCCTCACAGCCTCTGGACAGGGAGCTTGTGCTGTGA ATGACCAAAACAAGTATAGACGTCTCCAAGAATGAGCGAAATGATGTTCTGGAAGCTTTTAATCCTGCAATTTCTAAGTTTCTTGCGCAACTTTCTCAGAAGGTTCAAAATTCTATCAAGCCTCAGCTCAAGGGACTAGCAAGTGATGGTCAGACATTAACGTCAATGAACCCGTCCACAAAAGGGGAGAAGAAGGGGTCTTCTTCATCCTGGGAGTTTGATGTGGAGAAGCAACTTCAGGCATGGAGGGAGAACCCTTCATGGACGGATAAGCCTCCACAAATAAAGGTTAGTGTACCAAAAGATACCCTTAGCAAACTCGATGTAAAGGTTGATGTTGGTTTGCCTCCGGATGCTGTCTATAATATTGTGACAGACCCTGATAACAAGAGAGTTTTCAAGAATATTAAAGAGGTGATATCCAGAAGGGTTTTGATTGATGAAGGATCGAGACAAGTGGTTGAGCTGGAGCAAGCAGCTTTGTGGAGATTTCTTTGGTGGTCAGGGACCATTGCAGTTCACGTTCTAGTAGATCAAAACAGAGCAGATCACTCGATGAAATTCAAGCAACTGAAGGCTGGATTTATGAAGAGATTTGAAGGCCGGTGGAGAGTAGAGCCTCTATTTGTTGATGAAGGAATGTGCATTCGGACAAAACCAAAGAATTTGGAAGATTATAATGCTTGCACAAAGGGCAAAGGAAGAATCGGGTCAAGGGTGAGCCTGGAACAGCTTATCGAGCCGGCCATTGTTCCACCACCGCCCATCTCCTGGTATCTACGTGGAATTACCACGAGGACAACGGAGATGCTAATTCTTGATCTCCTTGCTGAAGCCGAAAGGATAAGGGGAGATGTGAAAGATGAAGTTACAAACAAGGAGCTTCAAAGTTCTCAGAGAATATGTGATAGCAACTCGTTAGATAGCGTTCTTGATATTAAACAAAGATGGGCCATCCGTAGGAGAAATGCGAAACAACGTGGTAGGACTAGGAGCTTCCTTGCTGCCAAATGA MTKTSIDVSKNERNDVLEAFNPAISKFLAQLSQKVQNSIKPQLKGLASDGQTLTSMNPSTKGEKKGSSSSWEFDVEKQLQAWRENPSWTDKPPQIKVSVPKDTLSKLDVKVDVGLPPDAVYNIVTDPDNKRVFKNIKEVISRRVLIDEGSRQVVELEQAALWRFLWWSGTIAVHVLVDQNRADHSMKFKQLKAGFMKRFEGRWRVEPLFVDEGMCIRTKPKNLEDYNACTKGKGRIGSRVSLEQLIEPAIVPPPPISWYLRGITTRTTEMLILDLLAEAERIRGDVKDEVTNKELQSSQRICDSNSLDSVLDIKQRWAIRRRNAKQRGRTRSFLAAK Homology
BLAST of Carg20511 vs. NCBI nr
Match: KAG6585159.1 (hypothetical protein SDJN03_17892, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 667.5 bits (1721), Expect = 5.9e-188 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Carg20511 vs. NCBI nr
Match: KAG7020079.1 (hypothetical protein SDJN02_16761 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 667.5 bits (1721), Expect = 5.9e-188 Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0
BLAST of Carg20511 vs. NCBI nr
Match: XP_022951197.1 (uncharacterized protein LOC111454111 [Cucurbita moschata] >XP_022951198.1 uncharacterized protein LOC111454111 [Cucurbita moschata] >XP_022951199.1 uncharacterized protein LOC111454111 [Cucurbita moschata] >XP_022951200.1 uncharacterized protein LOC111454111 [Cucurbita moschata]) HSP 1 Score: 662.1 bits (1707), Expect = 2.5e-186 Identity = 335/337 (99.41%), Postives = 335/337 (99.41%), Query Frame = 0
BLAST of Carg20511 vs. NCBI nr
Match: XP_023538140.1 (uncharacterized protein LOC111798998 [Cucurbita pepo subsp. pepo] >XP_023538141.1 uncharacterized protein LOC111798998 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 656.8 bits (1693), Expect = 1.0e-184 Identity = 332/337 (98.52%), Postives = 333/337 (98.81%), Query Frame = 0
BLAST of Carg20511 vs. NCBI nr
Match: XP_023002629.1 (uncharacterized protein LOC111496430 [Cucurbita maxima] >XP_023002630.1 uncharacterized protein LOC111496430 [Cucurbita maxima] >XP_023002631.1 uncharacterized protein LOC111496430 [Cucurbita maxima] >XP_023002632.1 uncharacterized protein LOC111496430 [Cucurbita maxima]) HSP 1 Score: 654.4 bits (1687), Expect = 5.2e-184 Identity = 332/337 (98.52%), Postives = 332/337 (98.52%), Query Frame = 0
BLAST of Carg20511 vs. ExPASy TrEMBL
Match: A0A6J1GH26 (uncharacterized protein LOC111454111 OS=Cucurbita moschata OX=3662 GN=LOC111454111 PE=3 SV=1) HSP 1 Score: 662.1 bits (1707), Expect = 1.2e-186 Identity = 335/337 (99.41%), Postives = 335/337 (99.41%), Query Frame = 0
BLAST of Carg20511 vs. ExPASy TrEMBL
Match: A0A6J1KK24 (uncharacterized protein LOC111496430 OS=Cucurbita maxima OX=3661 GN=LOC111496430 PE=3 SV=1) HSP 1 Score: 654.4 bits (1687), Expect = 2.5e-184 Identity = 332/337 (98.52%), Postives = 332/337 (98.52%), Query Frame = 0
BLAST of Carg20511 vs. ExPASy TrEMBL
Match: A0A0A0LKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348260 PE=3 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 6.6e-153 Identity = 285/339 (84.07%), Postives = 300/339 (88.50%), Query Frame = 0
BLAST of Carg20511 vs. ExPASy TrEMBL
Match: A0A5A7V2I7 (DUF220 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002280 PE=3 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 7.3e-152 Identity = 281/339 (82.89%), Postives = 305/339 (89.97%), Query Frame = 0
BLAST of Carg20511 vs. ExPASy TrEMBL
Match: A0A1S3BAW9 (uncharacterized protein LOC103487688 OS=Cucumis melo OX=3656 GN=LOC103487688 PE=3 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 7.3e-152 Identity = 281/339 (82.89%), Postives = 305/339 (89.97%), Query Frame = 0
BLAST of Carg20511 vs. TAIR 10
Match: AT1G70480.1 (Domain of unknown function (DUF220) ) HSP 1 Score: 386.3 bits (991), Expect = 2.4e-107 Identity = 196/321 (61.06%), Postives = 241/321 (75.08%), Query Frame = 0
BLAST of Carg20511 vs. TAIR 10
Match: AT1G70480.2 (Domain of unknown function (DUF220) ) HSP 1 Score: 386.3 bits (991), Expect = 2.4e-107 Identity = 196/321 (61.06%), Postives = 241/321 (75.08%), Query Frame = 0
BLAST of Carg20511 vs. TAIR 10
Match: AT1G23560.1 (Domain of unknown function (DUF220) ) HSP 1 Score: 285.0 bits (728), Expect = 7.7e-77 Identity = 144/311 (46.30%), Postives = 210/311 (67.52%), Query Frame = 0
BLAST of Carg20511 vs. TAIR 10
Match: AT1G23520.1 (Domain of unknown function (DUF220) ) HSP 1 Score: 170.6 bits (431), Expect = 2.1e-42 Identity = 91/241 (37.76%), Postives = 146/241 (60.58%), Query Frame = 0
BLAST of Carg20511 vs. TAIR 10
Match: AT1G23670.2 (Domain of unknown function (DUF220) ) HSP 1 Score: 167.9 bits (424), Expect = 1.4e-41 Identity = 101/242 (41.74%), Postives = 147/242 (60.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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