Carg20462 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20462
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial
Location	Carg_Chr12: 243515 .. 245756 (+)
RNA-Seq Expression	Carg20462
Synteny	Carg20462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCCAGCAGCTCCAGTGTTCTGTCCAAATGTTCTTCTTCCTCATCTCCTCGCCTGGTCGCTTGTGAACTCCGATTCTGTTTCGAATCAAGAAGTGGAAGATGAGCTTGAGAATCCTCAAGCTCAGCCATTGAAGTTGAAGATCAAAGCTCTCTCAACAACACAATTTGGTAATGGGTTTTGAGGGAAAGGGTTCGAACAGAATCAACTAGATTGCTGACGAACATACCGAGGATTATTTCTGGTGTTGAATTATAGCAGTTGGTTGGAATCAAATTGTTCATCACATGAAGATTTCGATAATCAGGACCGTTGAATTAGGAAGGAACAGAAATGGAGATATACCTCTTTGACTAGATTTTGGGCATTTTTGCAGAAGAAAATGATCGATCCATATCCTAAGCTTGGAATCTGCTTTTTTTTTTTTTTTTTTTTGTTTCTTATTTCTCTTTATTCTGAAGGAAAATAAATGTTAACATTGCTTCACATCTCAGCAAAAGAAATTTTAATTACATTCCAAAAATAAATAAATAAATAAAATCCATAATAATTTTCTTAATTAAAATACCATATTCAGTTTATGTATTGATGGGTTTTATTTTATTTTGGACAAATTTAATTATGTATTAGTGGCTGCAAATATTTTTAAGATTTAGTATTTACGTGTACCTCTTAACCATCACGAACCGCAATTCAATCTCAGCCGTTCATCGTGATCAGGAAATCGCAACCGTAGCTATTGCTTACTACAGATCGCCACTCGGCAGTTTATCTCTGTACCTCTCTTGACCTCTCTCTTCTCTTCGATCCTGCAAATCTCCCTCTATTGCCTTCTGAAGCACTTCATGCTATGGTAAGGGATCTGTATTTCTTCCGCGCCGATTACTAATTTCTCGTTTGTTTTCTGTCGCTTTCTTTATTTCGAATTTTGTTTCCGGGTTGTTCTGATTTAGTGTTTGAATTTGAATGTTTCGAAGAGATTTAGATGATGATTTGTTGTTTCGAGTGATTTTGATTCTTCTATTTGTACTGATCGTTCAAAAATTGTCACGGACATAACTATTTGATTACAAGTTTTTACGTTCTTCAGCATCTGTTTGTAAGTTGGCATTAGGTCCGTGAATAAATTCACGGTGGTTTTTTAAGTTCATCCTTCTCTTCTTCTTGTTTCGTTTGTTTGTTTGTTTTTGTTATTTCCACATTTAAACTGATCATCATTAGCTGGGTTTACATTACACGTGATTGAATTACCAAAATTATTCACTCAGCGACCTAGTATATTGATATGTACTATTCGTCAGGCACCTGTTCGGGGCATGCTCTATCTTCAACGAACAGTATTGACAAGGATTTATAATGATAGATGGGGTATAGGGTTGAGAGCATTTAGCAATCAGGGTGCAGCTGCTACTAGCAGCCCTCAGCCTCCCCCACCTCCTCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGACCGAATCTTTACCAACTTATACGGTTTACATGACCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTTCCGATTGGATTGTCAACGAGGTCAAGAAGTCTGGCCTCCGCGGTCGTGGAGGTGCTGGGTTTCCATCTGGACTCAAATGGTCATTCATGCCAAAAGTATCCGATGGTCGCCCGTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACGTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAAGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTATATATACATCAGAGGTGAGTATGTGAATGAGCGAAGGAACCTTGAAAAGGCCAGAAAAGAGGCTTATGAAGCTGGATTGTTGGGCAAGAATGCCTGTGGAACTGGTTATGATTTTGATGTTCACATCCACTTTGGTGCTGGAGCTTACATTTGTGGTGAAGAAACAGCTCTATTGGAAAGCCTTGAAGGGAAACAGGGGAAACCAAGATTGAAGCCTCCTTTCCCTGCTAATGCAGGTTTATATGGATGCCCTACCACTGTTACAAATGTGGAGACCGTGGCTGTTTCTCCTACTATTTTAATATAGAAGGCCCTGTGTAAAAGAACAGGAGCCTCTCACCAAGAATCAGGAAGCTCTGCATTGCGATCAATACGGGGACATGCCGAATTCCCAAGTGCCAAAGCCTGA

mRNA sequence

ATGTGTCCAGCAGCTCCAGTGTTCTGTCCAAATGTTCTTCTTCCTCATCTCCTCGCCTGGTCGCTTGTGAACTCCGATTCTGTTTCGAATCAAGAAGTGGAAGATGAGCTTGAGAATCCTCAAGCTCAGCCATTGAAGTTGAAGATCAAAGCTCTCTCAACAACACAATTTGATCGCCACTCGGCAGTTTATCTCTGTACCTCTCTTGACCTCTCTCTTCTCTTCGATCCTGCAAATCTCCCTCTATTGCCTTCTGAAGCACTTCATGCTATGGCACCTGTTCGGGGCATGCTCTATCTTCAACGAACAGTATTGACAAGGATTTATAATGATAGATGGGGTATAGGGTTGAGAGCATTTAGCAATCAGGGTGCAGCTGCTACTAGCAGCCCTCAGCCTCCCCCACCTCCTCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGACCGAATCTTTACCAACTTATACGGTTTACATGACCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTTCCGATTGGATTGTCAACGAGGTCAAGAAGTCTGGCCTCCGCGGTCGTGGAGGTGCTGGGTTTCCATCTGGACTCAAATGGTCATTCATGCCAAAAGTATCCGATGGTCGCCCGTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACGTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAAGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTATATATACATCAGAGGTGAGTATGTGAATGAGCGAAGGAACCTTGAAAAGGCCAGAAAAGAGGCTTATGAAGCTGGATTGTTGGGCAAGAATGCCTGTGGAACTGGTTATGATTTTGATGTTCACATCCACTTTGGTGCTGGAGCTTACATTTGTGGTGAAGAAACAGCTCTATTGGAAAGCCTTGAAGGGAAACAGGGGAAACCAAGATTGAAGCCTCCTTTCCCTGCTAATGCAGGTTTATATGGATGCCCTACCACTGTTACAAATGTGGAGACCGTGGCTAAGGCCCTGTGTAAAAGAACAGGAGCCTCTCACCAAGAATCAGGAAGCTCTGCATTGCGATCAATACGGGGACATGCCGAATTCCCAAGTGCCAAAGCCTGA

Coding sequence (CDS)

ATGTGTCCAGCAGCTCCAGTGTTCTGTCCAAATGTTCTTCTTCCTCATCTCCTCGCCTGGTCGCTTGTGAACTCCGATTCTGTTTCGAATCAAGAAGTGGAAGATGAGCTTGAGAATCCTCAAGCTCAGCCATTGAAGTTGAAGATCAAAGCTCTCTCAACAACACAATTTGATCGCCACTCGGCAGTTTATCTCTGTACCTCTCTTGACCTCTCTCTTCTCTTCGATCCTGCAAATCTCCCTCTATTGCCTTCTGAAGCACTTCATGCTATGGCACCTGTTCGGGGCATGCTCTATCTTCAACGAACAGTATTGACAAGGATTTATAATGATAGATGGGGTATAGGGTTGAGAGCATTTAGCAATCAGGGTGCAGCTGCTACTAGCAGCCCTCAGCCTCCCCCACCTCCTCCACCTCCAGAGAAAACTCATTTTGGTGGCTTGAAGGATGAGGACCGAATCTTTACCAACTTATACGGTTTACATGACCCCTTTCTCAAAGGTGCCATGAAACGTGGTGATTGGTACAGAACTAAAGATTTAGTACTCAAGGGTTCCGATTGGATTGTCAACGAGGTCAAGAAGTCTGGCCTCCGCGGTCGTGGAGGTGCTGGGTTTCCATCTGGACTCAAATGGTCATTCATGCCAAAAGTATCCGATGGTCGCCCGTCCTATCTTGTTGTCAATGCTGATGAAAGTGAACCCGGAACGTGTAAGGACAGGGAAATCATGCGGCACGATCCACACAAACTCTTGGAAGGTTGTCTGATTGCTGGAGTTGGGATGAGGGCTACTGCAGCTTATATATACATCAGAGGTGAGTATGTGAATGAGCGAAGGAACCTTGAAAAGGCCAGAAAAGAGGCTTATGAAGCTGGATTGTTGGGCAAGAATGCCTGTGGAACTGGTTATGATTTTGATGTTCACATCCACTTTGGTGCTGGAGCTTACATTTGTGGTGAAGAAACAGCTCTATTGGAAAGCCTTGAAGGGAAACAGGGGAAACCAAGATTGAAGCCTCCTTTCCCTGCTAATGCAGGTTTATATGGATGCCCTACCACTGTTACAAATGTGGAGACCGTGGCTAAGGCCCTGTGTAAAAGAACAGGAGCCTCTCACCAAGAATCAGGAAGCTCTGCATTGCGATCAATACGGGGACATGCCGAATTCCCAAGTGCCAAAGCCTGA

Protein sequence

MCPAAPVFCPNVLLPHLLAWSLVNSDSVSNQEVEDELENPQAQPLKLKIKALSTTQFDRHSAVYLCTSLDLSLLFDPANLPLLPSEALHAMAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVAKALCKRTGASHQESGSSALRSIRGHAEFPSAKA

Homology

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BLAST of Carg20462 vs. NCBI nr
Match: KAG7020128.1 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 812.0 bits (2096), Expect = 2.3e-231
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0


Query: 1   MCPAAPVFCPNVLLPHLLAWSLVNSDSVSNQEVEDELENPQAQPLKLKIKALSTTQFDRH 60
           MCPAAPVFCPNVLLPHLLAWSLVNSDSVSNQEVEDELENPQAQPLKLKIKALSTTQFDRH
Sbjct: 1   MCPAAPVFCPNVLLPHLLAWSLVNSDSVSNQEVEDELENPQAQPLKLKIKALSTTQFDRH 60

Query: 61  SAVYLCTSLDLSLLFDPANLPLLPSEALHAMAPVRGMLYLQRTVLTRIYNDRWGIGLRAF 120
           SAVYLCTSLDLSLLFDPANLPLLPSEALHAMAPVRGMLYLQRTVLTRIYNDRWGIGLRAF
Sbjct: 61  SAVYLCTSLDLSLLFDPANLPLLPSEALHAMAPVRGMLYLQRTVLTRIYNDRWGIGLRAF 120

Query: 121 SNQGAAATSSPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKD 180
           SNQGAAATSSPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKD
Sbjct: 121 SNQGAAATSSPQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKD 180

Query: 181 LVLKGSDWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD 240
           LVLKGSDWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD
Sbjct: 181 LVLKGSDWIVNEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKD 240

Query: 241 REIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNAC 300
           REIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNAC
Sbjct: 241 REIMRHDPHKLLEGCLIAGVGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNAC 300

Query: 301 GTGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVET 360
           GTGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVET
Sbjct: 301 GTGYDFDVHIHFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVET 360

Query: 361 VAKALCKRTGASHQESGSSALRSIRGHAEFPSAKA 396
           VAKALCKRTGASHQESGSSALRSIRGHAEFPSAKA
Sbjct: 361 VAKALCKRTGASHQESGSSALRSIRGHAEFPSAKA 395

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BLAST of Carg20462 vs. NCBI nr
Match: XP_022951540.1 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita moschata] >XP_022951541.1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita moschata] >XP_022951542.1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita moschata])

HSP 1 Score: 573.5 bits (1477), Expect = 1.4e-159
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

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BLAST of Carg20462 vs. NCBI nr
Match: KAG6585208.1 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.5 bits (1477), Expect = 1.4e-159
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. NCBI nr
Match: XP_023002163.1 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita maxima] >XP_023002164.1 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 566.2 bits (1458), Expect = 2.2e-157
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTR YNDRWGIGLRAFSNQGAAA+SSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRSYNDRWGIGLRAFSNQGAAASSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDW RTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWCRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. NCBI nr
Match: XP_023537312.1 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566.2 bits (1458), Expect = 2.2e-157
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTR YNDRW IGLRAFSNQGAAA+SSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRSYNDRWVIGLRAFSNQGAAASSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy Swiss-Prot
Match: Q9FNN5 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g08530 PE=1 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.6e-142
Identity = 240/272 (88.24%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRG+L LQR V     ++R    LR+FS Q A+ +++PQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNER NLEKAR+EAY AGLLGKNACG+GYDF+V+IHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy Swiss-Prot
Match: Q0MQI4 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus OX=9600 GN=NDUFV1 PE=2 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.5e-105
Identity = 180/259 (69.50%), Postives = 210/259 (81.08%), Query Frame = 0


Query: 140 PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLR 199
           P+KT FG LKDEDRIFTNLYG HD  LKGA+ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 200 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 259
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 260 VGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYIC 319
             M A AAYIYIRGE+ NE  NL+ A +EAYEAGL+GKNACG+GYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 320 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA--KALCKR-----TGAS 379
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVA    +C+R      G  
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 380 HQESGSSALRSIRGHAEFP 392
            + +  + L +I GH  +P
Sbjct: 267 RERNSGTKLFNISGHVNYP 285

[Close]

BLAST of Carg20462 vs. ExPASy Swiss-Prot
Match: Q0MQI5 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Gorilla gorilla gorilla OX=9595 GN=NDUFV1 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.6e-105
Identity = 180/259 (69.50%), Postives = 210/259 (81.08%), Query Frame = 0


Query: 140 PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLR 199
           P+KT FG LKDEDRIFTNLYG HD  LKGA+ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGALSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 200 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 259
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLVEGCLVGG 146

Query: 260 VGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYIC 319
             M A AAYIYIRGE+ NE  NL+ A +EAYEAGL+GKNACG+GYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 320 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA--KALCKR-----TGAS 379
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVA    +C+R     +G  
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFSGFG 266

Query: 380 HQESGSSALRSIRGHAEFP 392
            + +  + L +I GH   P
Sbjct: 267 RERNSGTKLFNISGHVNHP 285

[Close]

BLAST of Carg20462 vs. ExPASy Swiss-Prot
Match: P25708 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus OX=9913 GN=NDUFV1 PE=1 SV=2)

HSP 1 Score: 383.3 bits (983), Expect = 3.4e-105
Identity = 182/259 (70.27%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 140 PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLR 199
           P+KT FG LKDEDRIFTNLYG HD  LKGA  RGDWY+TK+++LKG DWI+ EVK SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLR 86

Query: 200 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 259
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKL+EGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGG 146

Query: 260 VGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYIC 319
             M A AAYIYIRGE+ NE  NL+ A +EAYEAGL+GKNACG+GYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 320 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA--KALCKRTGA-----S 379
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVA    +C+R GA      
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFG 266

Query: 380 HQESGSSALRSIRGHAEFP 392
            + +  + L +I GH   P
Sbjct: 267 RERNSGTKLFNISGHVNNP 285

[Close]

BLAST of Carg20462 vs. ExPASy Swiss-Prot
Match: P49821 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens OX=9606 GN=NDUFV1 PE=1 SV=4)

HSP 1 Score: 383.3 bits (983), Expect = 3.4e-105
Identity = 180/259 (69.50%), Postives = 209/259 (80.69%), Query Frame = 0


Query: 140 PEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLR 199
           P+KT FG LKDEDRIFTNLYG HD  LKG++ RGDWY+TK+++LKG DWI+ E+K SGLR
Sbjct: 27  PKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLR 86

Query: 200 GRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAG 259
           GRGGAGFP+GLKWSFM K SDGRP YLVVNADE EPGTCKDREI+RHDPHKLLEGCL+ G
Sbjct: 87  GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGG 146

Query: 260 VGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYIC 319
             M A AAYIYIRGE+ NE  NL+ A +EAYEAGL+GKNACG+GYDFDV +  GAGAYIC
Sbjct: 147 RAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYIC 206

Query: 320 GEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA--KALCKR-----TGAS 379
           GEETAL+ES+EGKQGKPRLKPPFPA+ G++GCPTTV NVETVA    +C+R      G  
Sbjct: 207 GEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFG 266

Query: 380 HQESGSSALRSIRGHAEFP 392
            + +  + L +I GH   P
Sbjct: 267 RERNSGTKLFNISGHVNHP 285

[Close]

BLAST of Carg20462 vs. ExPASy TrEMBL
Match: A0A6J1GHV2 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111454322 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.6e-160
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy TrEMBL
Match: A0A6J1KPP0 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111496104 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 1.1e-157
Identity = 269/272 (98.90%), Postives = 270/272 (99.26%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRGMLYLQRTVLTR YNDRWGIGLRAFSNQGAAA+SSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGMLYLQRTVLTRSYNDRWGIGLRAFSNQGAAASSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDW RTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWCRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy TrEMBL
Match: A0A6J1KBW2 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491890 PE=3 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 6.4e-155
Identity = 261/272 (95.96%), Postives = 266/272 (97.79%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAP RG+LYLQRT L R YNDRWG+G RAFSNQGAAA SSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPFRGLLYLQRTALARSYNDRWGVGFRAFSNQGAAANSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKG+DWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNER+NLEKARKEAYEAGLLGKNACG+GYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLEKARKEAYEAGLLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy TrEMBL
Match: A0A6J1HE25 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462637 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 8.3e-155
Identity = 261/272 (95.96%), Postives = 265/272 (97.43%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAP RGMLYLQRT L R YNDRWG+G RAFSNQGAAA SSPQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPFRGMLYLQRTALARSYNDRWGVGFRAFSNQGAAANSSPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKG+DWIVNEVKKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGTDWIVNEVKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNER+NLEKARKEAYEAG LGKNACG+GYDFDVHIHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERKNLEKARKEAYEAGFLGKNACGSGYDFDVHIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

[Close]

BLAST of Carg20462 vs. ExPASy TrEMBL
Match: A0A5A7UFG3 (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006160 PE=3 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 5.4e-154
Identity = 266/292 (91.10%), Postives = 274/292 (93.84%), Query Frame = 0


Query: 71  LSLLFDPANLPLLPSEALHAMAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSS 130
           L L   PA L +   EALHAMAP RGMLYLQ   L R Y D+WGIGLRAFS+QGAAA  S
Sbjct: 43  LDLPQSPARLRI---EALHAMAPFRGMLYLQHRTLARRYIDQWGIGLRAFSSQGAAAPGS 102

Query: 131 PQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIV 190
           PQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKG+DWIV
Sbjct: 103 PQPPPPPPPPEKTHFGGLKDEDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGADWIV 162

Query: 191 NEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHK 250
           NEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHK
Sbjct: 163 NEVKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHK 222

Query: 251 LLEGCLIAGVGMRATAAYIYIRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHI 310
           LLEGCLIAGVGMRATAAYIYIRGEYVNER+NLEKARKEAYEAGLLGKNACG+GYDFDVHI
Sbjct: 223 LLEGCLIAGVGMRATAAYIYIRGEYVNERKNLEKARKEAYEAGLLGKNACGSGYDFDVHI 282

Query: 311 HFGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           H+GAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 283 HYGAGAYICGEETALLESLEGKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 331

[Close]

BLAST of Carg20462 vs. TAIR 10
Match: AT5G08530.1 (51 kDa subunit of complex I )

HSP 1 Score: 505.8 bits (1301), Expect = 3.2e-143
Identity = 240/272 (88.24%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 91  MAPVRGMLYLQRTVLTRIYNDRWGIGLRAFSNQGAAATSSPQPPPPPPPPEKTHFGGLKD 150
           MAPVRG+L LQR V     ++R    LR+FS Q A+ +++PQPPPPPPPPEKTHFGGLKD
Sbjct: 1   MAPVRGILGLQRAVSIWKESNRLTPALRSFSTQAASTSTTPQPPPPPPPPEKTHFGGLKD 60

Query: 151 EDRIFTNLYGLHDPFLKGAMKRGDWYRTKDLVLKGSDWIVNEVKKSGLRGRGGAGFPSGL 210
           EDRIFTNLYGLHDPFLKGAMKRGDW+RTKDLVLKG+DWIVNE+KKSGLRGRGGAGFPSGL
Sbjct: 61  EDRIFTNLYGLHDPFLKGAMKRGDWHRTKDLVLKGTDWIVNEMKKSGLRGRGGAGFPSGL 120

Query: 211 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRATAAYIY 270
           KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRA+AAYIY
Sbjct: 121 KWSFMPKVSDGRPSYLVVNADESEPGTCKDREIMRHDPHKLLEGCLIAGVGMRASAAYIY 180

Query: 271 IRGEYVNERRNLEKARKEAYEAGLLGKNACGTGYDFDVHIHFGAGAYICGEETALLESLE 330
           IRGEYVNER NLEKAR+EAY AGLLGKNACG+GYDF+V+IHFGAGAYICGEETALLESLE
Sbjct: 181 IRGEYVNERLNLEKARREAYAAGLLGKNACGSGYDFEVYIHFGAGAYICGEETALLESLE 240

Query: 331 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 363
           GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA
Sbjct: 241 GKQGKPRLKPPFPANAGLYGCPTTVTNVETVA 272

The following BLAST results are available for this feature:

BLAST of Carg20462 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020128.1	2.3e-231	100.00	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, partial [Cucurbit...	[more]
XP_022951540.1	1.4e-159	100.00	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita moschat...	[more]
KAG6585208.1	1.4e-159	100.00	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial, partial [Cucurbit...	[more]
XP_023002163.1	2.2e-157	98.90	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita maxima]...	[more]
XP_023537312.1	2.2e-157	98.90	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Cucurbita pepo su...	[more]

BLAST of Carg20462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNN5	4.6e-142	88.24	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Arabidopsis tha...	[more]
Q0MQI4	1.5e-105	69.50	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus ...	[more]
Q0MQI5	2.6e-105	69.50	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Gorilla gorilla...	[more]
P25708	3.4e-105	70.27	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus OX=9...	[more]
P49821	3.4e-105	69.50	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens OX...	[more]

BLAST of Carg20462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHV2	6.6e-160	100.00	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita mosch...	[more]
A0A6J1KPP0	1.1e-157	98.90	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita maxim...	[more]
A0A6J1KBW2	6.4e-155	95.96	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita maxim...	[more]
A0A6J1HE25	8.3e-155	95.96	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucurbita mosch...	[more]
A0A5A7UFG3	5.4e-154	91.10	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Cucumis melo va...	[more]

BLAST of Carg20462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08530.1	3.2e-143	88.24	51 kDa subunit of complex I	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011538	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain	PFAM	PF01512	Complex1_51K	coord: 193..363 e-value: 2.4E-47 score: 160.6
IPR037225	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	GENE3D	3.40.50.11540		coord: 198..373 e-value: 4.0E-78 score: 263.2
IPR037225	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	SUPERFAMILY	142019	Nqo1 FMN-binding domain-like	coord: 151..363
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 376..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..147
None	No IPR available	PANTHER	PTHR11780:SF11	NADH DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN 1, MITOCHONDRIAL	coord: 137..365
None	No IPR available	PANTHER	PTHR11780	NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1	coord: 137..365
IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	PROSITE	PS00644	COMPLEX1_51K_1	coord: 313..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20462-RA	Carg20462-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0010181	FMN binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity