Carg20437 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20437
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein PP2-B10-like
Location	Carg_Chr01: 2583727 .. 2584200 (-)
RNA-Seq Expression	Carg20437
Synteny	Carg20437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTATCACCAGGCACATTATATGCAGCCTATATGGTATTCAAGCTAACATCCTCGGACGGCTTCCAACGCCAGCCCGTCGAGGTTGGAGTCGGCCTTGTCGGGTCCGAAGCAACCAAGCAAACAGTTTATTTAGACAACGTAGATAGTGAATGGCGACAGCGCCACCCAATTGTGTCGAGGGGGATCGGCCTTTTCAACCTTAACAGACGACGCGTCACAATCGGCACACAGGTAGCTATGCCCCCCCATGAAACCACCAGGAACAATGCCCCAGCCGAGGACTGCAGTCACCGCGTCGTCCCGAAGGAGAGGGAGGACGGGTGGCTGGAGGTTCAGCTTGGTGTGTTCTTCCATGATGGGGGGGTCAATGGGGAGCTGGAGATGAGCGTGTTGGAGGTCAAGGGTGGGCATTGGAAGAGCGGTTTGCTTATACAGGGAATTGAAATCAGGCCAAAAGACTTGAAGACCTAA

mRNA sequence

ATGCTATCACCAGGCACATTATATGCAGCCTATATGGTATTCAAGCTAACATCCTCGGACGGCTTCCAACGCCAGCCCGTCGAGGTTGGAGTCGGCCTTGTCGGGTCCGAAGCAACCAAGCAAACAGTTTATTTAGACAACGTAGATAGTGAATGGCGACAGCGCCACCCAATTGTGTCGAGGGGGATCGGCCTTTTCAACCTTAACAGACGACGCGTCACAATCGGCACACAGGTAGCTATGCCCCCCCATGAAACCACCAGGAACAATGCCCCAGCCGAGGACTGCAGTCACCGCGTCGTCCCGAAGGAGAGGGAGGACGGGTGGCTGGAGGTTCAGCTTGGTGTGTTCTTCCATGATGGGGGGGTCAATGGGGAGCTGGAGATGAGCGTGTTGGAGGTCAAGGGTGGGCATTGGAAGAGCGGTTTGCTTATACAGGGAATTGAAATCAGGCCAAAAGACTTGAAGACCTAA

Coding sequence (CDS)

ATGCTATCACCAGGCACATTATATGCAGCCTATATGGTATTCAAGCTAACATCCTCGGACGGCTTCCAACGCCAGCCCGTCGAGGTTGGAGTCGGCCTTGTCGGGTCCGAAGCAACCAAGCAAACAGTTTATTTAGACAACGTAGATAGTGAATGGCGACAGCGCCACCCAATTGTGTCGAGGGGGATCGGCCTTTTCAACCTTAACAGACGACGCGTCACAATCGGCACACAGGTAGCTATGCCCCCCCATGAAACCACCAGGAACAATGCCCCAGCCGAGGACTGCAGTCACCGCGTCGTCCCGAAGGAGAGGGAGGACGGGTGGCTGGAGGTTCAGCTTGGTGTGTTCTTCCATGATGGGGGGGTCAATGGGGAGCTGGAGATGAGCGTGTTGGAGGTCAAGGGTGGGCATTGGAAGAGCGGTTTGCTTATACAGGGAATTGAAATCAGGCCAAAAGACTTGAAGACCTAA

Protein sequence

MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVSRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHDGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT

Homology

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BLAST of Carg20437 vs. NCBI nr
Match: KAG7036827.1 (F-box protein PP2-B1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.0 bits (837), Expect = 8.8e-86
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS
Sbjct: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD
Sbjct: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT
Sbjct: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 157

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BLAST of Carg20437 vs. NCBI nr
Match: KAG6607139.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.0 bits (837), Expect = 8.8e-86
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS
Sbjct: 177 MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 236

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD
Sbjct: 237 RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 296

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT
Sbjct: 297 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 333

[Close]

BLAST of Carg20437 vs. NCBI nr
Match: XP_022949540.1 (F-box protein PP2-B10-like [Cucurbita moschata])

HSP 1 Score: 323.9 bits (829), Expect = 7.5e-85
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS
Sbjct: 177 MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 236

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRR VTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD
Sbjct: 237 RGIGLFNLNRRCVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 296

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT
Sbjct: 297 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 333

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BLAST of Carg20437 vs. NCBI nr
Match: XP_023521720.1 (F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.7 bits (779), Expect = 4.7e-79
Identity = 147/157 (93.63%), Postives = 155/157 (98.73%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVF+L +++GFQRQPV+VGVGLVGSEAT+QTVYL+NVDSEWRQRHPIVS
Sbjct: 177 MLSPGTLYAAYMVFRLLTTNGFQRQPVKVGVGLVGSEATEQTVYLENVDSEWRQRHPIVS 236

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRRRVTIGTQVAM P+ETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD
Sbjct: 237 RGIGLFNLNRRRVTIGTQVAM-PNETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 296

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT
Sbjct: 297 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 332

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BLAST of Carg20437 vs. NCBI nr
Match: XP_022998814.1 (F-box protein PP2-B10-like [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 146/157 (92.99%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLT+S+GFQRQPV+VGVGLVGSE TKQT YL+NVDSEWRQRHPIVS
Sbjct: 188 MLSPGTLYAAYMVFKLTTSNGFQRQPVKVGVGLVGSEVTKQTAYLENVDSEWRQRHPIVS 247

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRRRVTI TQVAM PHETTRNNAPAEDCSHR+VPKEREDGWLEVQLGVFFHD
Sbjct: 248 RGIGLFNLNRRRVTISTQVAM-PHETTRNNAPAEDCSHRIVPKEREDGWLEVQLGVFFHD 307

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           G VNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDL T
Sbjct: 308 GRVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLTT 343

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BLAST of Carg20437 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-22
Identity = 68/162 (41.98%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTS--SDGFQRQPVEVGVGLVGSEATKQTVYLD--NVDSEWRQRH 60
           MLS GT Y+ Y+VFK  +  S GF   PVE GVG VG  ATK++VY +  N DS     H
Sbjct: 175 MLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSH 234

Query: 61  PIVSRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGV 120
                GI    ++R        + +   E        E   + V PKER DGW EV+LG 
Sbjct: 235 ---YSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGK 294

Query: 121 FFHDGGVNG-----ELEMSVLEVKGGHWKSGLLIQGIEIRPK 154
           F+ + G  G     E+E+S++E + G+WKSGL+IQGIEIRP+
Sbjct: 295 FYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPE 333

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BLAST of Carg20437 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 59/153 (38.56%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTS-SDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           +LSPGT Y+AY+VFK      G    PVEVG+GLVG E++K+ +Y               
Sbjct: 204 VLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYF-------------- 263

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
              IG  +   RR T          + T+             P +REDGW+E +LG FF+
Sbjct: 264 ---IGPRDRRGRRET---------RDVTK-------------PDQREDGWMEAELGEFFN 316

Query: 121 DGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRP 153
           +   + E+E SV+E+K   WKSGL+IQGIE RP
Sbjct: 324 EERCD-EIEFSVIEIKSPSWKSGLIIQGIEFRP 316

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BLAST of Carg20437 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 59/155 (38.06%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFK-LTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           +LSP T Y+AY+VFK +    GFQ   +E  VG+VG E +++ +               +
Sbjct: 157 VLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEA----------I 216

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
            RG       RR V                          V PK+REDGW+E++LG FF+
Sbjct: 217 RRG-------RRNV--------------------------VKPKQREDGWMEIELGEFFN 268

Query: 121 DGGV--NGELEMSVLEVKGGHWKSGLLIQGIEIRP 153
           DGG+  N E+EMS LE K  + K GL+IQGIEIRP
Sbjct: 277 DGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

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BLAST of Carg20437 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.1e-17
Identity = 57/163 (34.97%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVF-KLTSSDGFQRQPVEVGVGLVG---SEATKQTVYLD-NVDSEWRQR 60
           ++SP T Y+AY+V+ KL    GF+   VEV VG+VG    E+ ++ +  D  +D ++R+R
Sbjct: 181 VISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRR 240

Query: 61  HPIVSRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLG 120
                RG  L                                  V P+ R+DGW+E+++G
Sbjct: 241 ----DRGKNL----------------------------------VKPERRKDGWMEIKIG 300

Query: 121 VFFHDGGV--NGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLK 157
            FF++GG+  + E+EM  LE K  HWK GL+IQGIEIRP +++
Sbjct: 301 EFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRPTNIR 305

[Close]

BLAST of Carg20437 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 3.8e-15
Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 2   LSPGTLYAAYMVFKLTS-SDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 61
           LSP T Y AY++ K+TS + G    P E  + +   E   ++ YL  +D++ +Q      
Sbjct: 147 LSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQ------ 206

Query: 62  RGIGLFNLNRRRVTIG-TQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVF-- 121
                      RV  G  +  M  HE  R        SHR  P+ R+DGW+E++LG F  
Sbjct: 207 ---------MERVFYGQREQRMATHEVVR--------SHRREPEVRDDGWMEIELGEFET 266

Query: 122 -FHDGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLK 157
              +G  + E+ MS+ EVKG   K G+ I GIE+RPK LK
Sbjct: 267 GSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPKPLK 283

[Close]

BLAST of Carg20437 vs. ExPASy TrEMBL
Match: A0A6J1GD04 (F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111452857 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 3.6e-85
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS
Sbjct: 177 MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 236

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRR VTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD
Sbjct: 237 RGIGLFNLNRRCVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 296

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT
Sbjct: 297 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 333

[Close]

BLAST of Carg20437 vs. ExPASy TrEMBL
Match: A0A6J1KFD1 (F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111493364 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 146/157 (92.99%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 60
           MLSPGTLYAAYMVFKLT+S+GFQRQPV+VGVGLVGSE TKQT YL+NVDSEWRQRHPIVS
Sbjct: 188 MLSPGTLYAAYMVFKLTTSNGFQRQPVKVGVGLVGSEVTKQTAYLENVDSEWRQRHPIVS 247

Query: 61  RGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFHD 120
           RGIGLFNLNRRRVTI TQVAM PHETTRNNAPAEDCSHR+VPKEREDGWLEVQLGVFFHD
Sbjct: 248 RGIGLFNLNRRRVTISTQVAM-PHETTRNNAPAEDCSHRIVPKEREDGWLEVQLGVFFHD 307

Query: 121 GGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           G VNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDL T
Sbjct: 308 GRVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLTT 343

[Close]

BLAST of Carg20437 vs. ExPASy TrEMBL
Match: A0A0A0LHD7 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G094900 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57
Identity = 119/158 (75.32%), Postives = 130/158 (82.28%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFK-LTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           MLSPGTLY+A++VFK  TSS GFQ+QPVEVGVGL G+E  K+TVYLD+V  +WRQRHPIV
Sbjct: 168 MLSPGTLYSAHLVFKPTTSSYGFQQQPVEVGVGLTGTEPVKRTVYLDDVSRDWRQRHPIV 227

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
            RG GLFNL  RR  IGTQV  PP E TRN+APA DC  R +PKERED WLEVQLG FFH
Sbjct: 228 HRGFGLFNLGGRRSMIGTQVGTPP-EITRNDAPAVDCG-RHIPKEREDRWLEVQLGEFFH 287

Query: 121 DGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           DG  NGELE+SVLEVKGGHWK GLLIQGIEIRPK LKT
Sbjct: 288 DGD-NGELEISVLEVKGGHWKGGLLIQGIEIRPKGLKT 322

[Close]

BLAST of Carg20437 vs. ExPASy TrEMBL
Match: A0A5A7U6J4 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001790 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56
Identity = 118/158 (74.68%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFK-LTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           MLSPGTLYAAY+VFK  TSS GFQ+QPVEV VGL G+E  K+TVYLD+V+ +WRQRHPIV
Sbjct: 168 MLSPGTLYAAYLVFKPTTSSYGFQQQPVEVAVGLAGNETLKRTVYLDDVNRDWRQRHPIV 227

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
            RG GL NL RR + IGTQVA+ P E TRN+APA DC H  +PKERED WLEVQLG FFH
Sbjct: 228 HRGFGLLNLGRRGI-IGTQVAI-PREITRNDAPAVDCGHH-IPKEREDRWLEVQLGEFFH 287

Query: 121 DGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           D GV+GELE+SV EVKGGHWK GLLIQGIEIRPK LKT
Sbjct: 288 D-GVSGELEISVSEVKGGHWKGGLLIQGIEIRPKGLKT 321

[Close]

BLAST of Carg20437 vs. ExPASy TrEMBL
Match: A0A5D3DEW1 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G001100 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56
Identity = 118/158 (74.68%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFK-LTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           MLSPGTLYAAY+VFK  TSS GFQ+QPVEV VGL G+E  K+TVYLD+V+ +WRQRHPIV
Sbjct: 160 MLSPGTLYAAYLVFKPTTSSYGFQQQPVEVAVGLAGNETLKRTVYLDDVNRDWRQRHPIV 219

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
            RG GL NL RR + IGTQVA+ P E TRN+APA DC H  +PKERED WLEVQLG FFH
Sbjct: 220 HRGFGLLNLGRRGI-IGTQVAI-PREITRNDAPAVDCGHH-IPKEREDRWLEVQLGEFFH 279

Query: 121 DGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLKT 158
           D GV+GELE+SV EVKGGHWK GLLIQGIEIRPK LKT
Sbjct: 280 D-GVSGELEISVSEVKGGHWKGGLLIQGIEIRPKGLKT 313

[Close]

BLAST of Carg20437 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 68/162 (41.98%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTS--SDGFQRQPVEVGVGLVGSEATKQTVYLD--NVDSEWRQRH 60
           MLS GT Y+ Y+VFK  +  S GF   PVE GVG VG  ATK++VY +  N DS     H
Sbjct: 175 MLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSH 234

Query: 61  PIVSRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGV 120
                GI    ++R        + +   E        E   + V PKER DGW EV+LG 
Sbjct: 235 ---YSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGK 294

Query: 121 FFHDGGVNG-----ELEMSVLEVKGGHWKSGLLIQGIEIRPK 154
           F+ + G  G     E+E+S++E + G+WKSGL+IQGIEIRP+
Sbjct: 295 FYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPE 333

[Close]

BLAST of Carg20437 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 92.4 bits (228), Expect = 3.4e-19
Identity = 59/153 (38.56%), Postives = 80/153 (52.29%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFKLTS-SDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           +LSPGT Y+AY+VFK      G    PVEVG+GLVG E++K+ +Y               
Sbjct: 204 VLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYF-------------- 263

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
              IG  +   RR T          + T+             P +REDGW+E +LG FF+
Sbjct: 264 ---IGPRDRRGRRET---------RDVTK-------------PDQREDGWMEAELGEFFN 316

Query: 121 DGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRP 153
           +   + E+E SV+E+K   WKSGL+IQGIE RP
Sbjct: 324 EERCD-EIEFSVIEIKSPSWKSGLIIQGIEFRP 316

[Close]

BLAST of Carg20437 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 59/155 (38.06%), Postives = 79/155 (50.97%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVFK-LTSSDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIV 60
           +LSP T Y+AY+VFK +    GFQ   +E  VG+VG E +++ +               +
Sbjct: 157 VLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEA----------I 216

Query: 61  SRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVFFH 120
            RG       RR V                          V PK+REDGW+E++LG FF+
Sbjct: 217 RRG-------RRNV--------------------------VKPKQREDGWMEIELGEFFN 268

Query: 121 DGGV--NGELEMSVLEVKGGHWKSGLLIQGIEIRP 153
           DGG+  N E+EMS LE K  + K GL+IQGIEIRP
Sbjct: 277 DGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRP 268

[Close]

BLAST of Carg20437 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 89.4 bits (220), Expect = 2.9e-18
Identity = 57/163 (34.97%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 1   MLSPGTLYAAYMVF-KLTSSDGFQRQPVEVGVGLVG---SEATKQTVYLD-NVDSEWRQR 60
           ++SP T Y+AY+V+ KL    GF+   VEV VG+VG    E+ ++ +  D  +D ++R+R
Sbjct: 181 VISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRR 240

Query: 61  HPIVSRGIGLFNLNRRRVTIGTQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLG 120
                RG  L                                  V P+ R+DGW+E+++G
Sbjct: 241 ----DRGKNL----------------------------------VKPERRKDGWMEIKIG 300

Query: 121 VFFHDGGV--NGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLK 157
            FF++GG+  + E+EM  LE K  HWK GL+IQGIEIRP +++
Sbjct: 301 EFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRPTNIR 305

[Close]

BLAST of Carg20437 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-16
Identity = 56/160 (35.00%), Postives = 80/160 (50.00%), Query Frame = 0


Query: 2   LSPGTLYAAYMVFKLTS-SDGFQRQPVEVGVGLVGSEATKQTVYLDNVDSEWRQRHPIVS 61
           LSP T Y AY++ K+TS + G    P E  + +   E   ++ YL  +D++ +Q      
Sbjct: 147 LSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQ------ 206

Query: 62  RGIGLFNLNRRRVTIG-TQVAMPPHETTRNNAPAEDCSHRVVPKEREDGWLEVQLGVF-- 121
                      RV  G  +  M  HE  R        SHR  P+ R+DGW+E++LG F  
Sbjct: 207 ---------MERVFYGQREQRMATHEVVR--------SHRREPEVRDDGWMEIELGEFET 266

Query: 122 -FHDGGVNGELEMSVLEVKGGHWKSGLLIQGIEIRPKDLK 157
              +G  + E+ MS+ EVKG   K G+ I GIE+RPK LK
Sbjct: 267 GSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPKPLK 283

The following BLAST results are available for this feature:

BLAST of Carg20437 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036827.1	8.8e-86	100.00	F-box protein PP2-B1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607139.1	8.8e-86	100.00	F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949540.1	7.5e-85	99.36	F-box protein PP2-B10-like [Cucurbita moschata]	[more]
XP_023521720.1	4.7e-79	93.63	F-box protein PP2-B10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022998814.1	2.3e-78	92.99	F-box protein PP2-B10-like [Cucurbita maxima]	[more]

BLAST of Carg20437 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPT8	1.4e-22	41.98	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q3E6P4	4.8e-18	38.56	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ6	1.8e-17	38.06	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9ZVQ8	4.1e-17	34.97	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
O80494	3.8e-15	35.00	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]

BLAST of Carg20437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GD04	3.6e-85	99.36	F-box protein PP2-B10-like OS=Cucurbita moschata OX=3662 GN=LOC111452857 PE=4 SV...	[more]
A0A6J1KFD1	1.1e-78	92.99	F-box protein PP2-B10-like OS=Cucurbita maxima OX=3661 GN=LOC111493364 PE=4 SV=1	[more]
A0A0A0LHD7	1.9e-57	75.32	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G094900 PE=4 ...	[more]
A0A5A7U6J4	2.7e-56	74.68	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3DEW1	2.7e-56	74.68	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of Carg20437 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02230.1	1.0e-23	41.98	phloem protein 2-B1	[more]
AT2G02240.1	3.4e-19	38.56	F-box family protein	[more]
AT2G02360.1	1.3e-18	38.06	phloem protein 2-B10	[more]
AT2G02340.1	2.9e-18	34.97	phloem protein 2-B8	[more]
AT1G09155.1	2.7e-16	35.00	phloem protein 2-B15	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 1..152 e-value: 2.2E-27 score: 95.9
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 1..152
None	No IPR available	PANTHER	PTHR32278:SF89	SUBFAMILY NOT NAMED	coord: 1..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20437-RA	Carg20437-RA	mRNA