Carg20368 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20368
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr18: 11611903 .. 11613838 (+)
RNA-Seq Expression	Carg20368
Synteny	Carg20368

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCTCTCATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTTCTTCTTCAAGGTACGGTCGTCTCTCCCTTCTCGTTTTACCTTTTCATGCGGAAACCAGACAGAGACTCTAATCAAAGCCCTATGCACCTCGGCAACCCCTAATGATTTCTTAAATTTCCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATTTTCTCAGGGCCAATGGGGCTCACCGAACCAAGTTCATTCTCGGAGTGGGAATTTTAATAATCAGTCGTTCTCGGAGTTTCAGAATCGTGACTATGTTCCACAGGGAAGCTCTAATAATCAAATGAGTTATCGGAGTGAGAACCAGAGCTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGGGCTATTCTCAAGCCGGTAACCCTAATTCGTGGAATCCTCCGAATCAGAGCTACCCGCAGTATCAAAATCCTCCGCAGCCGAACGCTCAACATTTCAATTATCAACAACAAAGAGGCCCCAACCAATGGAACAATCAAAATCAGGGATACCCACAATTTGGAAGGCCTGGGCAGGGGAACCCACAAGTAGAGAATTCTTATCGGTTGAATAATCAAGCGCCAAATCCCTCTGTATCTCCTATTGATGAACTGCGGCGCTTTTGTGAAGAGGGAAAGGTTAAAGAAGCTGTTGAGTTGTTGAAAGAGGGTGTTAAAGCTGATGCTGATTGTTTCCTTGTATTGTTTGATCTGTGTGGGAAATCAAATTCATTCGACAACGCTAAAGTAGTTCATGATTACTTTTTACAGTCAACTTGTAGAAGCGATCTGCAATTGAATAATAAAGTTCTTGAGATGTATGGGAAATGTGGAAGCATGAGTGATGCACGGAGGGTGTTCGACCATATGCCTGACAGGAATATTGACTCTTGGCATTTGATGATAAAAGGATATGCAGAGAATGGATTGGGTGATGAGGGTCTGGAGTTATTTGAGAGTATGCAGAAGCTGGGATTGCAACCCAATTCACAAACTTTTCTTTTTGTAATGCGAGCTTGTGCTAGTGCGAGTGCTATAGAAGAAGGATTTATGTACTTTGACTCAATGAAAAATGATTATCAAATCGACCCAGATCTGGATCATTATTTGGGGCTCTTGGGTGTCCTTGGAGAACCTGGACATATGAACGAAGCTTTCGAGTACGTCGAAAAATTGCCCATGGAGCCGACGGTTGAGGTATGGGAGACATTGAAAAACTATGCTAGAATTCATGGAGATGTTGATCTTGAAGACTATGCAGAGGAGCTAATTGTGGATCTGGACCCGACGAAAGCTGCCTCGAGTAAGAAGATACCTACACCACCTCCCAAAAGGCGGTCTGCAATTAGCATGCTTGATGGGAAGAACAGGATTAGTGAATTCAGAAATCCAACTCTCTACAAAGATGACGAGAAGTTGAAGGCTTTAAAGGCAATGAAAGAACAAGGGTATGTTCCCGATACTCGATACGTTCTTCACGATATCGATCAGGAGGCCAAAGAACAGGCATTGCTGTATCATAGCGAACGATTGGCAATCGCATACGGGTTGATCAGTACTCCGGCACGAACACCTCTTAGGATTATTAAGAACTTAAGGATATGTGGTGACTGTCACAACGCCATCAAAATCATGTCTAGAATTGTTGGGAGAGAGTTAATTGTGAGGGACAACAAACGGTTCCATCATTTTAAGGATGGTAAATGTTCTTGTGGGGATTACTGGTAAACCCATCATCATTCTACAACACCCCACAACAGGTACCTGATGAGTTTGTCGTCGTCCCCATAGCAGCAGCTCGATGTAAAGTGTTAAACCATCAAAATGGTTGTCCAAACCCAGGAACGAGGTACCGATCGGAGATGAGCTAGCCCGCCTCGCACGGTATGCTTATCCTGATGCTTAA

mRNA sequence

ATGGCGTCTCTCATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTTCTTCTTCAAGGTACGGTCGTCTCTCCCTTCTCGTTTTACCTTTTCATGCGGAAACCAGACAGAGACTCTAATCAAAGCCCTATGCACCTCGGCAACCCCTAATGATTTCTTAAATTTCCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATTTTCTCAGGGCCAATGGGGCTCACCGAACCAAGTTCATTCTCGGAGTGGGAATTTTAATAATCAGTCGTTCTCGGAGTTTCAGAATCGTGACTATGTTCCACAGGGAAGCTCTAATAATCAAATGAGTTATCGGAGTGAGAACCAGAGCTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGGGCTATTCTCAAGCCGGTAACCCTAATTCGTGGAATCCTCCGAATCAGAGCTACCCGCAGTATCAAAATCCTCCGCAGCCGAACGCTCAACATTTCAATTATCAACAACAAAGAGGCCCCAACCAATGGAACAATCAAAATCAGGGATACCCACAATTTGGAAGGCCTGGGCAGGGGAACCCACAAGTAGAGAATTCTTATCGGTTGAATAATCAAGCGCCAAATCCCTCTGTATCTCCTATTGATGAACTGCGGCGCTTTTGTGAAGAGGGAAAGGTTAAAGAAGCTGTTGAGTTGTTGAAAGAGGGTGTTAAAGCTGATGCTGATTGTTTCCTTGTATTGTTTGATCTGTGTGGGAAATCAAATTCATTCGACAACGCTAAAGTAGTTCATGATTACTTTTTACAGTCAACTTGTAGAAGCGATCTGCAATTGAATAATAAAGTTCTTGAGATGTATGGGAAATGTGGAAGCATGAGTGATGCACGGAGGGTGTTCGACCATATGCCTGACAGGAATATTGACTCTTGGCATTTGATGATAAAAGGATATGCAGAGAATGGATTGGGTGATGAGGGTCTGGAGTTATTTGAGAGTATGCAGAAGCTGGGATTGCAACCCAATTCACAAACTTTTCTTTTTGTAATGCGAGCTTGTGCTAGTGCGAGTGCTATAGAAGAAGGATTTATGTACTTTGACTCAATGAAAAATGATTATCAAATCGACCCAGATCTGGATCATTATTTGGGGCTCTTGGGTGTCCTTGGAGAACCTGGACATATGAACGAAGCTTTCGAGTACGTCGAAAAATTGCCCATGGAGCCGACGGTTGAGGTATGGGAGACATTGAAAAACTATGCTAGAATTCATGGAGATGTTGATCTTGAAGACTATGCAGAGGAGCTAATTGTGGATCTGGACCCGACGAAAGCTGCCTCGAGTAAGAAGATACCTACACCACCTCCCAAAAGGCGGTCTGCAATTAGCATGCTTGATGGGAAGAACAGGATTAGTGAATTCAGAAATCCAACTCTCTACAAAGATGACGAGAAGTTGAAGGCTTTAAAGGCAATGAAAGAACAAGGGTATGTTCCCGATACTCGATACGTTCTTCACGATATCGATCAGGAGGCCAAAGAACAGGCATTGCTGTATCATAGCGAACGATTGGCAATCGCATACGGGTTGATCAGTACTCCGGCACGAACACCTCTTAGGATTATTAAGAACTTAAGGATATGTGGTGACTGTCACAACGCCATCAAAATCATGTCTAGAATTGTTGGGAGAGAGTTAATTGTGAGGGACAACAAACGGTTCCATCATTTTAAGGATGGTAAATGTTCTTGTGGGGATTACTGGAACGAGGTACCGATCGGAGATGAGCTAGCCCGCCTCGCACGGTATGCTTATCCTGATGCTTAA

Coding sequence (CDS)

ATGGCGTCTCTCATGGCGGTCCGGCGTGCTCGAACCCCCATTCTTATCTCCTTCTTCTTCAAGGTACGGTCGTCTCTCCCTTCTCGTTTTACCTTTTCATGCGGAAACCAGACAGAGACTCTAATCAAAGCCCTATGCACCTCGGCAACCCCTAATGATTTCTTAAATTTCCCTCCGCCGCAACAACATTCTTCATCCGACCCTCGATTTTCTCAGGGCCAATGGGGCTCACCGAACCAAGTTCATTCTCGGAGTGGGAATTTTAATAATCAGTCGTTCTCGGAGTTTCAGAATCGTGACTATGTTCCACAGGGAAGCTCTAATAATCAAATGAGTTATCGGAGTGAGAACCAGAGCTCTCACCCGAATCCTGGATTTTCCCGGCAGGGTCAGGGCTATTCTCAAGCCGGTAACCCTAATTCGTGGAATCCTCCGAATCAGAGCTACCCGCAGTATCAAAATCCTCCGCAGCCGAACGCTCAACATTTCAATTATCAACAACAAAGAGGCCCCAACCAATGGAACAATCAAAATCAGGGATACCCACAATTTGGAAGGCCTGGGCAGGGGAACCCACAAGTAGAGAATTCTTATCGGTTGAATAATCAAGCGCCAAATCCCTCTGTATCTCCTATTGATGAACTGCGGCGCTTTTGTGAAGAGGGAAAGGTTAAAGAAGCTGTTGAGTTGTTGAAAGAGGGTGTTAAAGCTGATGCTGATTGTTTCCTTGTATTGTTTGATCTGTGTGGGAAATCAAATTCATTCGACAACGCTAAAGTAGTTCATGATTACTTTTTACAGTCAACTTGTAGAAGCGATCTGCAATTGAATAATAAAGTTCTTGAGATGTATGGGAAATGTGGAAGCATGAGTGATGCACGGAGGGTGTTCGACCATATGCCTGACAGGAATATTGACTCTTGGCATTTGATGATAAAAGGATATGCAGAGAATGGATTGGGTGATGAGGGTCTGGAGTTATTTGAGAGTATGCAGAAGCTGGGATTGCAACCCAATTCACAAACTTTTCTTTTTGTAATGCGAGCTTGTGCTAGTGCGAGTGCTATAGAAGAAGGATTTATGTACTTTGACTCAATGAAAAATGATTATCAAATCGACCCAGATCTGGATCATTATTTGGGGCTCTTGGGTGTCCTTGGAGAACCTGGACATATGAACGAAGCTTTCGAGTACGTCGAAAAATTGCCCATGGAGCCGACGGTTGAGGTATGGGAGACATTGAAAAACTATGCTAGAATTCATGGAGATGTTGATCTTGAAGACTATGCAGAGGAGCTAATTGTGGATCTGGACCCGACGAAAGCTGCCTCGAGTAAGAAGATACCTACACCACCTCCCAAAAGGCGGTCTGCAATTAGCATGCTTGATGGGAAGAACAGGATTAGTGAATTCAGAAATCCAACTCTCTACAAAGATGACGAGAAGTTGAAGGCTTTAAAGGCAATGAAAGAACAAGGGTATGTTCCCGATACTCGATACGTTCTTCACGATATCGATCAGGAGGCCAAAGAACAGGCATTGCTGTATCATAGCGAACGATTGGCAATCGCATACGGGTTGATCAGTACTCCGGCACGAACACCTCTTAGGATTATTAAGAACTTAAGGATATGTGGTGACTGTCACAACGCCATCAAAATCATGTCTAGAATTGTTGGGAGAGAGTTAATTGTGAGGGACAACAAACGGTTCCATCATTTTAAGGATGGTAAATGTTCTTGTGGGGATTACTGGAACGAGGTACCGATCGGAGATGAGCTAGCCCGCCTCGCACGGTATGCTTATCCTGATGCTTAA

Protein sequence

MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFPPPQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARYAYPDA

Homology

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BLAST of Carg20368 vs. NCBI nr
Match: KAG7013281.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1228.8 bits (3178), Expect = 0.0e+00
Identity = 605/605 (100.00%), Postives = 605/605 (100.00%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFPPP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFPPP 60

Query: 61  QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS 120
           QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS
Sbjct: 61  QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS 120

Query: 121 HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG 180
           HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG
Sbjct: 121 HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG 180

Query: 181 YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD 240
           YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD
Sbjct: 181 YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD 240

Query: 241 CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM 300
           CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM
Sbjct: 241 CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM 300

Query: 301 PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF 360
           PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF
Sbjct: 301 PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF 360

Query: 361 MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI 420
           MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI
Sbjct: 361 MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI 420

Query: 421 HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD 480
           HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD
Sbjct: 421 HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD 480

Query: 481 EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 540
           EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK
Sbjct: 481 EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 540

Query: 541 NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY 600
           NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY
Sbjct: 541 NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY 600

Query: 601 AYPDA 606
           AYPDA
Sbjct: 601 AYPDA 605

[Close]

BLAST of Carg20368 vs. NCBI nr
Match: KAG6588655.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1226.5 bits (3172), Expect = 0.0e+00
Identity = 604/605 (99.83%), Postives = 604/605 (99.83%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFPPP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDF NFPPP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS 120
           QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS
Sbjct: 61  QQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQSS 120

Query: 121 HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG 180
           HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG
Sbjct: 121 HPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQG 180

Query: 181 YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD 240
           YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD
Sbjct: 181 YPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADAD 240

Query: 241 CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM 300
           CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM
Sbjct: 241 CFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHM 300

Query: 301 PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF 360
           PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF
Sbjct: 301 PDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEGF 360

Query: 361 MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI 420
           MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI
Sbjct: 361 MYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARI 420

Query: 421 HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD 480
           HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD
Sbjct: 421 HGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKDD 480

Query: 481 EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 540
           EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK
Sbjct: 481 EKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 540

Query: 541 NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY 600
           NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY
Sbjct: 541 NLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYWNEVPIGDELARLARY 600

Query: 601 AYPDA 606
           AYPDA
Sbjct: 601 AYPDA 605

[Close]

BLAST of Carg20368 vs. NCBI nr
Match: XP_022927876.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 574/586 (97.95%), Postives = 579/586 (98.81%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFF KVRSSLPSRF FSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQHSSSDPRF QGQWGSPNQVHSRSGNFNNQSFSEFQNRDYV QGSSNNQM+YRSENQS
Sbjct: 61  PQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADA 240
           GYPQFGRPGQGNPQVENSY+LNNQAPNPSVSPIDELRRFCEEGK+KEAVELLKEGVKADA
Sbjct: 181 GYPQFGRPGQGNPQVENSYQLNNQAPNPSVSPIDELRRFCEEGKIKEAVELLKEGVKADA 240

Query: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300
           DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH
Sbjct: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300

Query: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360
           MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG
Sbjct: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360

Query: 361 FMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420
           FMYF+SMKNDYQI+PDLDHYLGLLGVLGEPGHMNEAFEY EKLPMEPTVEVWETLKNYAR
Sbjct: 361 FMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYGEKLPMEPTVEVWETLKNYAR 420

Query: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480
           IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD
Sbjct: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480

Query: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540
           DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII
Sbjct: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540

Query: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586

[Close]

BLAST of Carg20368 vs. NCBI nr
Match: XP_023530084.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1139.8 bits (2947), Expect = 0.0e+00
Identity = 568/597 (95.14%), Postives = 577/597 (96.65%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQ SSSDPRF QGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQM+YRSENQS
Sbjct: 61  PQQRSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQR PNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRSPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAP-----------NPSVSPIDELRRFCEEGKVKEAV 240
           GYPQFGRPGQGNPQVENSY+LNNQA            NPSVSP DELRRFCEEGK+KEAV
Sbjct: 181 GYPQFGRPGQGNPQVENSYQLNNQAGVQGHGSQNQALNPSVSPTDELRRFCEEGKIKEAV 240

Query: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300
           ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQST RSDLQLNNKVLEMYGKCG
Sbjct: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGKCG 300

Query: 301 SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMR 360
           SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESM+KLGLQPNSQTFL+VMR
Sbjct: 301 SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMKKLGLQPNSQTFLYVMR 360

Query: 361 ACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420
           ACASASAIEEGFMYF+SMK+DYQI+PDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV
Sbjct: 361 ACASASAIEEGFMYFESMKSDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420

Query: 421 EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480
           E+WETLKNYARIHGDVDLEDYAEELIVDL PTKAASSKKIPTPPPKRRSAISMLDGKNRI
Sbjct: 421 EIWETLKNYARIHGDVDLEDYAEELIVDLGPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480

Query: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540
           SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI
Sbjct: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540

Query: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 597

[Close]

BLAST of Carg20368 vs. NCBI nr
Match: XP_022988718.1 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 561/586 (95.73%), Postives = 572/586 (97.61%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQHSSSDPRF Q QWGSP+QVHSRSGNFNNQSFSEF NRDYVPQGSSNNQ++YRSENQS
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPG SRQGQGYS AGNPNSW+P NQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADA 240
           GYPQFGRPGQG PQVENSY+LNNQA NPSVS  DELRRFCEEGK+KEAVELLKEGVKADA
Sbjct: 181 GYPQFGRPGQGKPQVENSYQLNNQALNPSVSLTDELRRFCEEGKIKEAVELLKEGVKADA 240

Query: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300
           DCFLVLFDLCGKSNSFDNAKVVHDYFLQST RSDLQLNNKVLEMYGKCGS+SDARRVFDH
Sbjct: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGKCGSISDARRVFDH 300

Query: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360
           MPDRNIDSWHLMI+GYAENGLGDEGLELFESM+KLGLQPNSQTFLFVMRACASASAIEEG
Sbjct: 301 MPDRNIDSWHLMIEGYAENGLGDEGLELFESMKKLGLQPNSQTFLFVMRACASASAIEEG 360

Query: 361 FMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420
           FMYF+SMKNDYQI+PDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR
Sbjct: 361 FMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420

Query: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480
           IHGDVDLED AEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD
Sbjct: 421 IHGDVDLEDCAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480

Query: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540
           DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII
Sbjct: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540

Query: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586

[Close]

BLAST of Carg20368 vs. ExPASy Swiss-Prot
Match: Q9ZQE5 (Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2)

HSP 1 Score: 510.8 bits (1314), Expect = 2.2e-143
Identity = 296/596 (49.66%), Postives = 380/596 (63.76%), Query Frame = 0


Query: 1   MASLMAVRRARTP--ILISFFFKVRSSLP---SRFTFSCGNQTETLIKALCTSATPNDFL 60
           M+SLMA+R ART   + I    ++RSS P   S+F FS G      IK L TSA  ND+ 
Sbjct: 1   MSSLMAIRCARTQNIVTIGSLLQLRSSFPRLSSQFHFS-GTLNSIPIKHLSTSAAANDYH 60

Query: 61  NFPPPQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRS 120
             P     S     +    + S NQ ++      + +    Q+   +PQ    N      
Sbjct: 61  QNPQSGSPSQHQRPYPPQSFDSQNQTNTNQRVPQSPNQWSTQHGGQIPQYGGQNPQHGGQ 120

Query: 121 ENQSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQY--QNP----PQPNAQHFNYQQQR 180
                  NP   +QG   SQ G  N  +  ++  PQY  Q P    P  N Q+ N QQ  
Sbjct: 121 RPPYGGQNP---QQGGQMSQYGGHNPQHGGHR--PQYGGQRPQYGGPGNNYQNQNVQQSN 180

Query: 181 GPNQWNNQNQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVE 240
               +  Q Q  PQ  R    +P      ++N  AP PSV   +E+ R C+    K+A+E
Sbjct: 181 QSQYYTPQQQQQPQPPRSSNQSPN-----QMNEVAPPPSV---EEVMRLCQRRLYKDAIE 240

Query: 241 LLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGS 300
           LL +G   D +CF++LF+ C    S +++K VHD+FLQS  R D +LNN V+ M+G+C S
Sbjct: 241 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 300

Query: 301 MSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRA 360
           ++DA+RVFDHM D+++DSWHLM+  Y++NG+GD+ L LFE M K GL+PN +TFL V  A
Sbjct: 301 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 360

Query: 361 CASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVE 420
           CA+   IEE F++FDSMKN++ I P  +HYLG+LGVLG+ GH+ EA +Y+  LP EPT +
Sbjct: 361 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 420

Query: 421 VWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRIS 480
            WE ++NYAR+HGD+DLEDY EEL+VD+DP+KA  + KIPTPPPK     +M+  K+RI 
Sbjct: 421 FWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVIN-KIPTPPPKSFKETNMVTSKSRIL 480

Query: 481 EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 540
           EFRN T YKD+ K  A K  K   YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I 
Sbjct: 481 EFRNLTFYKDEAKEMAAK--KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIIC 540

Query: 541 TPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           TP R  L IIKNLR+CGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 TPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Carg20368 vs. ExPASy Swiss-Prot
Match: Q9SUU7 (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.9e-87
Identity = 194/504 (38.49%), Postives = 284/504 (56.35%), Query Frame = 0


Query: 103 PQGSSNNQMSY-RSENQSSHPNPGFSRQGQGYSQAGNP-NSWNPPNQSYPQYQNPPQPNA 162
           P  +S++ + Y    N       GF  Q   Y Q+ NP +  NP N+ Y    N  Q   
Sbjct: 43  PMDNSSHHIGYVNGFNGGEQSLGGF--QQNSYEQSLNPVSGQNPTNRFYQNGYNRNQSYG 102

Query: 163 QHFNYQQQRGPNQWNNQNQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCE 222
           +H     QR  N W + + G   +G  G G PQ  N+   + Q  +   S +DEL   C 
Sbjct: 103 EHSEIINQRNQN-WQS-SDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICR 162

Query: 223 EGKVKEAVELLK----EGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQL 282
           EGKVK+AVE++K    EG   D      +  LCG + +   AKVVH++   S   SD+  
Sbjct: 163 EGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISA 222

Query: 283 NNKVLEMYGKCGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGL 342
            N ++EMY  CGS+ DA  VF+ MP+RN+++W  +I+ +A+NG G++ ++ F   ++ G 
Sbjct: 223 YNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 282

Query: 343 QPNSQTFLFVMRACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAF 402
           +P+ + F  +  AC     + EG ++F+SM  +Y I P ++HY+ L+ +L EPG+++EA 
Sbjct: 283 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 342

Query: 403 EYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRR 462
            +VE   MEP V++WETL N +R+HGD+ L D  ++++  LD ++     K    P K  
Sbjct: 343 RFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSS 402

Query: 463 SAIS-----MLDGKN---------RISEFRNPTLYKDDEKLKALKA-MKEQGYVPDTRYV 522
             +      M  G N          IS   N  LY     LK+LK  M E GYVP ++  
Sbjct: 403 DLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYM---ALKSLKEHMIEIGYVPLSKLA 462

Query: 523 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGR 582
           LHD+DQE+K++ L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+MS+IVGR
Sbjct: 463 LHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGR 522

Query: 583 ELIVRDNKRFHHFKDGKCSCGDYW 586
           ELI RD KRFHH KDG CSC +YW
Sbjct: 523 ELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of Carg20368 vs. ExPASy Swiss-Prot
Match: Q680H3 (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 8.7e-84
Identity = 163/395 (41.27%), Postives = 241/395 (61.01%), Query Frame = 0


Query: 212 IDELRRFCEEGKVKEAVE----LLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQ 271
           I+E   FC+ GKVK+A+     L       D    L L  +CG++     AK VH     
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 272 STCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLEL 331
           S    DL  N+ +LEMY  CG  ++A  VF+ M ++N+++W ++I+ +A+NG G++ +++
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 332 FESMQKLGLQPNSQTFLFVMRACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLG 391
           F   ++ G  P+ Q F  +  AC     ++EG ++F+SM  DY I P ++ Y+ L+ +  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 392 EPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKK 451
            PG ++EA E+VE++PMEP V+VWETL N +R+HG+++L DY  E++  LDPT+     +
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 452 ---IPTPPP-------KRRSAISMLDG-KNRISEFR--NPTLYKDDEKLKALKAMK---- 511
              IP           K+RS I  L G K+ + EFR  +  L ++DE  + L+ +K    
Sbjct: 463 EGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 512 EQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 571
           E GYV +TR  LHDIDQE+KE  LL HSER+A A  ++++  R P  +IKNLR+C DCHN
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 572 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           A+KIMS IVGRE+I RD KRFH  K+G C+C DYW
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615

[Close]

BLAST of Carg20368 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 1.8e-76
Identity = 150/424 (35.38%), Postives = 242/424 (57.08%), Query Frame = 0


Query: 194 VENSYRLNNQAPNPS-VSPIDELRRFCEEGKVKEAVELLKE----GVKADADCFLVLFDL 253
           V ++Y++ ++ P    V+    +  F E GK +EA+ L  E    G+K D    + L   
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231

Query: 254 CGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSW 313
           C K  +    K VH Y ++     +L  +N +L++Y +CG + +A+ +FD M D+N  SW
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291

Query: 314 HLMIKGYAENGLGDEGLELFESMQKL-GLQPNSQTFLFVMRACASASAIEEGFMYFDSMK 373
             +I G A NG G E +ELF+ M+   GL P   TF+ ++ AC+    ++EGF YF  M+
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351

Query: 374 NDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLE 433
            +Y+I+P ++H+  ++ +L   G + +A+EY++ +PM+P V +W TL     +HGD DL 
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411

Query: 434 DYAEELIVDLDPTKAAS--------------------SKKIPTPPPKRRSAISMLDGKNR 493
           ++A   I+ L+P  +                       K++     K+    S+++  NR
Sbjct: 412 EFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 471

Query: 494 ISEF-----RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERL 553
           + EF      +P       KLK +   ++ +GYVP    V  D+++E KE A++YHSE++
Sbjct: 472 VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKI 531

Query: 554 AIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 586
           AIA+ LISTP R+P+ ++KNLR+C DCH AIK++S++  RE++VRD  RFHHFK+G CSC
Sbjct: 532 AIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 591

[Close]

BLAST of Carg20368 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.9e-76
Identity = 142/382 (37.17%), Postives = 227/382 (59.42%), Query Frame = 0


Query: 230 LLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGS 289
           +L++G +     +  LF  C  +   +  K VH Y ++S  +      N +L+MY K GS
Sbjct: 253 MLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS 312

Query: 290 MSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRA 349
           + DAR++FD +  R++ SW+ ++  YA++G G E +  FE M+++G++PN  +FL V+ A
Sbjct: 313 IHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTA 372

Query: 350 CASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVE 409
           C+ +  ++EG+ Y++ MK D  I P+  HY+ ++ +LG  G +N A  ++E++P+EPT  
Sbjct: 373 CSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAA 432

Query: 410 VWETLKNYARIHGDVDLEDYAEELIVDLDP--------------------TKAASSKKIP 469
           +W+ L N  R+H + +L  YA E + +LDP                      A   KK+ 
Sbjct: 433 IWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMK 492

Query: 470 TPPPKRRSAISMLDGKNRISEF-RNPTLYKDDEKL-----KALKAMKEQGYVPDTRYVLH 529
               K+  A S ++ +N I  F  N   +   E++     + L  +KE GYVPDT +V+ 
Sbjct: 493 ESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIV 552

Query: 530 DIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGREL 586
            +DQ+ +E  L YHSE++A+A+ L++TP  + + I KN+R+CGDCH AIK+ S++VGRE+
Sbjct: 553 HVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREI 612

[Close]

BLAST of Carg20368 vs. ExPASy TrEMBL
Match: A0A6J1EIR6 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434643 PE=3 SV=1)

HSP 1 Score: 1160.6 bits (3001), Expect = 0.0e+00
Identity = 574/586 (97.95%), Postives = 579/586 (98.81%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFF KVRSSLPSRF FSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFLKVRSSLPSRFIFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQHSSSDPRF QGQWGSPNQVHSRSGNFNNQSFSEFQNRDYV QGSSNNQM+YRSENQS
Sbjct: 61  PQQHSSSDPRFLQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVQQGSSNNQMNYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ
Sbjct: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADA 240
           GYPQFGRPGQGNPQVENSY+LNNQAPNPSVSPIDELRRFCEEGK+KEAVELLKEGVKADA
Sbjct: 181 GYPQFGRPGQGNPQVENSYQLNNQAPNPSVSPIDELRRFCEEGKIKEAVELLKEGVKADA 240

Query: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300
           DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH
Sbjct: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300

Query: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360
           MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG
Sbjct: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360

Query: 361 FMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420
           FMYF+SMKNDYQI+PDLDHYLGLLGVLGEPGHMNEAFEY EKLPMEPTVEVWETLKNYAR
Sbjct: 361 FMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYGEKLPMEPTVEVWETLKNYAR 420

Query: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480
           IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD
Sbjct: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480

Query: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540
           DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII
Sbjct: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540

Query: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586

[Close]

BLAST of Carg20368 vs. ExPASy TrEMBL
Match: A0A6J1JN43 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 561/586 (95.73%), Postives = 572/586 (97.61%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQHSSSDPRF Q QWGSP+QVHSRSGNFNNQSFSEF NRDYVPQGSSNNQ++YRSENQS
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPG SRQGQGYS AGNPNSW+P NQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVELLKEGVKADA 240
           GYPQFGRPGQG PQVENSY+LNNQA NPSVS  DELRRFCEEGK+KEAVELLKEGVKADA
Sbjct: 181 GYPQFGRPGQGKPQVENSYQLNNQALNPSVSLTDELRRFCEEGKIKEAVELLKEGVKADA 240

Query: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDH 300
           DCFLVLFDLCGKSNSFDNAKVVHDYFLQST RSDLQLNNKVLEMYGKCGS+SDARRVFDH
Sbjct: 241 DCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGKCGSISDARRVFDH 300

Query: 301 MPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRACASASAIEEG 360
           MPDRNIDSWHLMI+GYAENGLGDEGLELFESM+KLGLQPNSQTFLFVMRACASASAIEEG
Sbjct: 301 MPDRNIDSWHLMIEGYAENGLGDEGLELFESMKKLGLQPNSQTFLFVMRACASASAIEEG 360

Query: 361 FMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420
           FMYF+SMKNDYQI+PDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR
Sbjct: 361 FMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYAR 420

Query: 421 IHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480
           IHGDVDLED AEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD
Sbjct: 421 IHGDVDLEDCAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRISEFRNPTLYKD 480

Query: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540
           DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII
Sbjct: 481 DEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRII 540

Query: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 KNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586

[Close]

BLAST of Carg20368 vs. ExPASy TrEMBL
Match: A0A6J1JDU2 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485971 PE=3 SV=1)

HSP 1 Score: 1120.5 bits (2897), Expect = 0.0e+00
Identity = 561/597 (93.97%), Postives = 572/597 (95.81%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNF-PP 60
           MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDF NF PP
Sbjct: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFSNFPPP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQHSSSDPRF Q QWGSP+QVHSRSGNFNNQSFSEF NRDYVPQGSSNNQ++YRSENQS
Sbjct: 61  PQQHSSSDPRFLQAQWGSPSQVHSRSGNFNNQSFSEFHNRDYVPQGSSNNQINYRSENQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           SHPNPG SRQGQGYS AGNPNSW+P NQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ
Sbjct: 121 SHPNPGVSRQGQGYSHAGNPNSWSPLNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQAP-----------NPSVSPIDELRRFCEEGKVKEAV 240
           GYPQFGRPGQG PQVENSY+LNNQA            NPSVS  DELRRFCEEGK+KEAV
Sbjct: 181 GYPQFGRPGQGKPQVENSYQLNNQAGVQGHGSQNQALNPSVSLTDELRRFCEEGKIKEAV 240

Query: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300
           ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQST RSDLQLNNKVLEMYGKCG
Sbjct: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTYRSDLQLNNKVLEMYGKCG 300

Query: 301 SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMR 360
           S+SDARRVFDHMPDRNIDSWHLMI+GYAENGLGDEGLELFESM+KLGLQPNSQTFLFVMR
Sbjct: 301 SISDARRVFDHMPDRNIDSWHLMIEGYAENGLGDEGLELFESMKKLGLQPNSQTFLFVMR 360

Query: 361 ACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420
           ACASASAIEEGFMYF+SMKNDYQI+PDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV
Sbjct: 361 ACASASAIEEGFMYFESMKNDYQINPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420

Query: 421 EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480
           EVWETLKNYARIHGDVDLED AEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI
Sbjct: 421 EVWETLKNYARIHGDVDLEDCAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480

Query: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540
           SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI
Sbjct: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540

Query: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 597

[Close]

BLAST of Carg20368 vs. ExPASy TrEMBL
Match: A0A6J1GL94 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455360 PE=3 SV=1)

HSP 1 Score: 1028.9 bits (2659), Expect = 8.8e-297
Identity = 516/597 (86.43%), Postives = 546/597 (91.46%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFP-P 60
           MASLMAVRR RTPI IS F KVRS LPS FTFSCGN+TETLIKAL TSA P+DF NFP P
Sbjct: 1   MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNRTETLIKALSTSAFPDDFSNFPTP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQ SSSDPR+ QGQWGSP+QVH  SGNFNNQSFSEFQNRDYV QGS +NQM+YRS+NQS
Sbjct: 61  PQQPSSSDPRYLQGQWGSPSQVHRPSGNFNNQSFSEFQNRDYVQQGSPSNQMNYRSQNQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           S+PNPGF RQGQ Y+Q GNPNSWNPPNQSYPQYQNP QPN Q+FNYQQQR PNQW+NQNQ
Sbjct: 121 SYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQA-----------PNPSVSPIDELRRFCEEGKVKEAV 240
           G PQFG+PGQ N Q ENSY+LNNQA           PN  VSPIDELRRFC EGK+KEAV
Sbjct: 181 GLPQFGKPGQRNLQAENSYQLNNQAGIQGHGAQNHTPNALVSPIDELRRFCGEGKLKEAV 240

Query: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300
           ELLKEGVKADADCF   F+LCGKS SF+NAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG
Sbjct: 241 ELLKEGVKADADCFHEFFELCGKSKSFENAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300

Query: 301 SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMR 360
           SMSDA+RVFDHM DR+I+SWHLMIKGYA+NGLGDEGLELFE+M+KLGL PNSQTFLFVM 
Sbjct: 301 SMSDAQRVFDHMLDRSIESWHLMIKGYADNGLGDEGLELFENMKKLGLHPNSQTFLFVMS 360

Query: 361 ACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420
           ACASASA+EEGFMYF+SMKNDY I+PD+DHYLGLLG+LGEPGH+NEAFEYVEKLPMEPTV
Sbjct: 361 ACASASAVEEGFMYFESMKNDYHINPDMDHYLGLLGILGEPGHINEAFEYVEKLPMEPTV 420

Query: 421 EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480
           EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAAS+ KIPTPPPK+R AISMLDGKNRI
Sbjct: 421 EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASN-KIPTPPPKKRFAISMLDGKNRI 480

Query: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540
            EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI
Sbjct: 481 VEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540

Query: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 596

[Close]

BLAST of Carg20368 vs. ExPASy TrEMBL
Match: A0A6J1I4R8 (pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111470986 PE=3 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.7e-295
Identity = 516/597 (86.43%), Postives = 546/597 (91.46%), Query Frame = 0


Query: 1   MASLMAVRRARTPILISFFFKVRSSLPSRFTFSCGNQTETLIKALCTSATPNDFLNFP-P 60
           MASLMAVRR RTPI IS F KVRS LPS FTFSCGNQTETLIKAL TSA P+DF NFP P
Sbjct: 1   MASLMAVRRVRTPIHISSFIKVRSPLPSTFTFSCGNQTETLIKALSTSAFPDDFSNFPTP 60

Query: 61  PQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRSENQS 120
           PQQ SSS PR+ QGQ GSP+QVH  SGNFNNQSFSEFQNRDYV  GS +NQM+ RS+NQS
Sbjct: 61  PQQPSSSHPRYLQGQRGSPSQVHRPSGNFNNQSFSEFQNRDYVQLGSPSNQMNNRSQNQS 120

Query: 121 SHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQYQNPPQPNAQHFNYQQQRGPNQWNNQNQ 180
           S+PNPGF RQGQ Y+Q GNPNSWNPPNQSYPQYQNP QPN Q+FNYQQQR PNQW+NQNQ
Sbjct: 121 SYPNPGFPRQGQSYTQGGNPNSWNPPNQSYPQYQNPSQPNPQNFNYQQQRAPNQWSNQNQ 180

Query: 181 GYPQFGRPGQGNPQVENSYRLNNQ-----------APNPSVSPIDELRRFCEEGKVKEAV 240
           G PQFG+PGQ N Q ENSY+LNNQ           APN  VSPIDELRRFC EGK+KEAV
Sbjct: 181 GLPQFGKPGQRNLQAENSYQLNNQAGIQGHGAQNHAPNALVSPIDELRRFCGEGKLKEAV 240

Query: 241 ELLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300
           ELLKEGVKADADCF  LF+LCGKS SFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG
Sbjct: 241 ELLKEGVKADADCFHELFELCGKSKSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCG 300

Query: 301 SMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMR 360
           SMSDA+RVFDHMPDR+I+SWHLMIKGYA+NGLGDEGLELFE+M+KLGLQPNSQTFLFVM 
Sbjct: 301 SMSDAQRVFDHMPDRSIESWHLMIKGYADNGLGDEGLELFENMKKLGLQPNSQTFLFVMS 360

Query: 361 ACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTV 420
           ACASASA+EEGFMYF+SMKNDY I+PD+DHYLGLLG+LGEPGH+NEAFEYVEKLP+EPTV
Sbjct: 361 ACASASAVEEGFMYFESMKNDYHINPDMDHYLGLLGILGEPGHINEAFEYVEKLPIEPTV 420

Query: 421 EVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRI 480
           EVWETLKNYA+IHGDVDLEDYAEELIVDLDPTKAAS+ KIPTPPPK+RSAISMLDGKNRI
Sbjct: 421 EVWETLKNYAKIHGDVDLEDYAEELIVDLDPTKAASN-KIPTPPPKKRSAISMLDGKNRI 480

Query: 481 SEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540
            EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI
Sbjct: 481 VEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLI 540

Query: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 STPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 596

[Close]

BLAST of Carg20368 vs. TAIR 10
Match: AT2G15690.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 510.8 bits (1314), Expect = 1.5e-144
Identity = 296/596 (49.66%), Postives = 380/596 (63.76%), Query Frame = 0


Query: 1   MASLMAVRRARTP--ILISFFFKVRSSLP---SRFTFSCGNQTETLIKALCTSATPNDFL 60
           M+SLMA+R ART   + I    ++RSS P   S+F FS G      IK L TSA  ND+ 
Sbjct: 1   MSSLMAIRCARTQNIVTIGSLLQLRSSFPRLSSQFHFS-GTLNSIPIKHLSTSAAANDYH 60

Query: 61  NFPPPQQHSSSDPRFSQGQWGSPNQVHSRSGNFNNQSFSEFQNRDYVPQGSSNNQMSYRS 120
             P     S     +    + S NQ ++      + +    Q+   +PQ    N      
Sbjct: 61  QNPQSGSPSQHQRPYPPQSFDSQNQTNTNQRVPQSPNQWSTQHGGQIPQYGGQNPQHGGQ 120

Query: 121 ENQSSHPNPGFSRQGQGYSQAGNPNSWNPPNQSYPQY--QNP----PQPNAQHFNYQQQR 180
                  NP   +QG   SQ G  N  +  ++  PQY  Q P    P  N Q+ N QQ  
Sbjct: 121 RPPYGGQNP---QQGGQMSQYGGHNPQHGGHR--PQYGGQRPQYGGPGNNYQNQNVQQSN 180

Query: 181 GPNQWNNQNQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCEEGKVKEAVE 240
               +  Q Q  PQ  R    +P      ++N  AP PSV   +E+ R C+    K+A+E
Sbjct: 181 QSQYYTPQQQQQPQPPRSSNQSPN-----QMNEVAPPPSV---EEVMRLCQRRLYKDAIE 240

Query: 241 LLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGS 300
           LL +G   D +CF++LF+ C    S +++K VHD+FLQS  R D +LNN V+ M+G+C S
Sbjct: 241 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 300

Query: 301 MSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGLQPNSQTFLFVMRA 360
           ++DA+RVFDHM D+++DSWHLM+  Y++NG+GD+ L LFE M K GL+PN +TFL V  A
Sbjct: 301 ITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLA 360

Query: 361 CASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVE 420
           CA+   IEE F++FDSMKN++ I P  +HYLG+LGVLG+ GH+ EA +Y+  LP EPT +
Sbjct: 361 CATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTAD 420

Query: 421 VWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRRSAISMLDGKNRIS 480
            WE ++NYAR+HGD+DLEDY EEL+VD+DP+KA  + KIPTPPPK     +M+  K+RI 
Sbjct: 421 FWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVIN-KIPTPPPKSFKETNMVTSKSRIL 480

Query: 481 EFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLIS 540
           EFRN T YKD+ K  A K  K   YVPDTR+VLHDIDQEAKEQALLYHSERLAIAYG+I 
Sbjct: 481 EFRNLTFYKDEAKEMAAK--KGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIIC 540

Query: 541 TPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           TP R  L IIKNLR+CGDCHN IKIMS+I+GR LIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 541 TPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579

[Close]

BLAST of Carg20368 vs. TAIR 10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 2.0e-88
Identity = 194/504 (38.49%), Postives = 284/504 (56.35%), Query Frame = 0


Query: 103 PQGSSNNQMSY-RSENQSSHPNPGFSRQGQGYSQAGNP-NSWNPPNQSYPQYQNPPQPNA 162
           P  +S++ + Y    N       GF  Q   Y Q+ NP +  NP N+ Y    N  Q   
Sbjct: 43  PMDNSSHHIGYVNGFNGGEQSLGGF--QQNSYEQSLNPVSGQNPTNRFYQNGYNRNQSYG 102

Query: 163 QHFNYQQQRGPNQWNNQNQGYPQFGRPGQGNPQVENSYRLNNQAPNPSVSPIDELRRFCE 222
           +H     QR  N W + + G   +G  G G PQ  N+   + Q  +   S +DEL   C 
Sbjct: 103 EHSEIINQRNQN-WQS-SDGCSSYGTTGNGVPQENNTGGNHFQQDHSGHSSLDELDSICR 162

Query: 223 EGKVKEAVELLK----EGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQSTCRSDLQL 282
           EGKVK+AVE++K    EG   D      +  LCG + +   AKVVH++   S   SD+  
Sbjct: 163 EGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISA 222

Query: 283 NNKVLEMYGKCGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLELFESMQKLGL 342
            N ++EMY  CGS+ DA  VF+ MP+RN+++W  +I+ +A+NG G++ ++ F   ++ G 
Sbjct: 223 YNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN 282

Query: 343 QPNSQTFLFVMRACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLGEPGHMNEAF 402
           +P+ + F  +  AC     + EG ++F+SM  +Y I P ++HY+ L+ +L EPG+++EA 
Sbjct: 283 KPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEAL 342

Query: 403 EYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKKIPTPPPKRR 462
            +VE   MEP V++WETL N +R+HGD+ L D  ++++  LD ++     K    P K  
Sbjct: 343 RFVES--MEPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSS 402

Query: 463 SAIS-----MLDGKN---------RISEFRNPTLYKDDEKLKALKA-MKEQGYVPDTRYV 522
             +      M  G N          IS   N  LY     LK+LK  M E GYVP ++  
Sbjct: 403 DLVKEKLQRMAKGPNYGIRYMAAGDISRPENRELYM---ALKSLKEHMIEIGYVPLSKLA 462

Query: 523 LHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGR 582
           LHD+DQE+K++ L  H+ER A     + TPAR+ +R++KNLR+C DCHNA+K+MS+IVGR
Sbjct: 463 LHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLMSKIVGR 522

Query: 583 ELIVRDNKRFHHFKDGKCSCGDYW 586
           ELI RD KRFHH KDG CSC +YW
Sbjct: 523 ELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of Carg20368 vs. TAIR 10
Match: AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 312.8 bits (800), Expect = 6.2e-85
Identity = 163/395 (41.27%), Postives = 241/395 (61.01%), Query Frame = 0


Query: 212 IDELRRFCEEGKVKEAVE----LLKEGVKADADCFLVLFDLCGKSNSFDNAKVVHDYFLQ 271
           I+E   FC+ GKVK+A+     L       D    L L  +CG++     AK VH     
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 272 STCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSWHLMIKGYAENGLGDEGLEL 331
           S    DL  N+ +LEMY  CG  ++A  VF+ M ++N+++W ++I+ +A+NG G++ +++
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 332 FESMQKLGLQPNSQTFLFVMRACASASAIEEGFMYFDSMKNDYQIDPDLDHYLGLLGVLG 391
           F   ++ G  P+ Q F  +  AC     ++EG ++F+SM  DY I P ++ Y+ L+ +  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 392 EPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAASSKK 451
            PG ++EA E+VE++PMEP V+VWETL N +R+HG+++L DY  E++  LDPT+     +
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 452 ---IPTPPP-------KRRSAISMLDG-KNRISEFR--NPTLYKDDEKLKALKAMK---- 511
              IP           K+RS I  L G K+ + EFR  +  L ++DE  + L+ +K    
Sbjct: 463 EGFIPVKASDVEKESLKKRSGI--LHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 512 EQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHN 571
           E GYV +TR  LHDIDQE+KE  LL HSER+A A  ++++  R P  +IKNLR+C DCHN
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 572 AIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 586
           A+KIMS IVGRE+I RD KRFH  K+G C+C DYW
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615

[Close]

BLAST of Carg20368 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-77
Identity = 150/424 (35.38%), Postives = 242/424 (57.08%), Query Frame = 0


Query: 194 VENSYRLNNQAPNPS-VSPIDELRRFCEEGKVKEAVELLKE----GVKADADCFLVLFDL 253
           V ++Y++ ++ P    V+    +  F E GK +EA+ L  E    G+K D    + L   
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 231

Query: 254 CGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSW 313
           C K  +    K VH Y ++     +L  +N +L++Y +CG + +A+ +FD M D+N  SW
Sbjct: 232 CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 291

Query: 314 HLMIKGYAENGLGDEGLELFESMQKL-GLQPNSQTFLFVMRACASASAIEEGFMYFDSMK 373
             +I G A NG G E +ELF+ M+   GL P   TF+ ++ AC+    ++EGF YF  M+
Sbjct: 292 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 351

Query: 374 NDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLE 433
            +Y+I+P ++H+  ++ +L   G + +A+EY++ +PM+P V +W TL     +HGD DL 
Sbjct: 352 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411

Query: 434 DYAEELIVDLDPTKAAS--------------------SKKIPTPPPKRRSAISMLDGKNR 493
           ++A   I+ L+P  +                       K++     K+    S+++  NR
Sbjct: 412 EFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 471

Query: 494 ISEF-----RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERL 553
           + EF      +P       KLK +   ++ +GYVP    V  D+++E KE A++YHSE++
Sbjct: 472 VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKI 531

Query: 554 AIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 586
           AIA+ LISTP R+P+ ++KNLR+C DCH AIK++S++  RE++VRD  RFHHFK+G CSC
Sbjct: 532 AIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 591

[Close]

BLAST of Carg20368 vs. TAIR 10
Match: AT4G21065.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-77
Identity = 150/424 (35.38%), Postives = 242/424 (57.08%), Query Frame = 0


Query: 194 VENSYRLNNQAPNPS-VSPIDELRRFCEEGKVKEAVELLKE----GVKADADCFLVLFDL 253
           V ++Y++ ++ P    V+    +  F E GK +EA+ L  E    G+K D    + L   
Sbjct: 39  VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA 98

Query: 254 CGKSNSFDNAKVVHDYFLQSTCRSDLQLNNKVLEMYGKCGSMSDARRVFDHMPDRNIDSW 313
           C K  +    K VH Y ++     +L  +N +L++Y +CG + +A+ +FD M D+N  SW
Sbjct: 99  CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSW 158

Query: 314 HLMIKGYAENGLGDEGLELFESMQKL-GLQPNSQTFLFVMRACASASAIEEGFMYFDSMK 373
             +I G A NG G E +ELF+ M+   GL P   TF+ ++ AC+    ++EGF YF  M+
Sbjct: 159 TSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMR 218

Query: 374 NDYQIDPDLDHYLGLLGVLGEPGHMNEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLE 433
            +Y+I+P ++H+  ++ +L   G + +A+EY++ +PM+P V +W TL     +HGD DL 
Sbjct: 219 EEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278

Query: 434 DYAEELIVDLDPTKAAS--------------------SKKIPTPPPKRRSAISMLDGKNR 493
           ++A   I+ L+P  +                       K++     K+    S+++  NR
Sbjct: 279 EFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNR 338

Query: 494 ISEF-----RNPTLYKDDEKLKALKA-MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERL 553
           + EF      +P       KLK +   ++ +GYVP    V  D+++E KE A++YHSE++
Sbjct: 339 VHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKI 398

Query: 554 AIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSC 586
           AIA+ LISTP R+P+ ++KNLR+C DCH AIK++S++  RE++VRD  RFHHFK+G CSC
Sbjct: 399 AIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSC 458

The following BLAST results are available for this feature:

BLAST of Carg20368 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013281.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6588655.1	0.0e+00	99.83	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022927876.1	0.0e+00	97.95	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur...	[more]
XP_023530084.1	0.0e+00	95.14	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucur...	[more]
XP_022988718.1	0.0e+00	95.73	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]

BLAST of Carg20368 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQE5	2.2e-143	49.66	Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidop...	[more]
Q9SUU7	2.9e-87	38.49	Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop...	[more]
Q680H3	8.7e-84	41.27	Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	1.8e-76	35.38	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q9LIQ7	3.9e-76	37.17	Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop...	[more]

BLAST of Carg20368 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIR6	0.0e+00	97.95	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]
A0A6J1JN43	0.0e+00	95.73	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]
A0A6J1JDU2	0.0e+00	93.97	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like isofor...	[more]
A0A6J1GL94	8.8e-297	86.43	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]
A0A6J1I4R8	1.7e-295	86.43	pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like OS=Cuc...	[more]

BLAST of Carg20368 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15690.1	1.5e-144	49.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32450.1	2.0e-88	38.49	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G25580.1	6.2e-85	41.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	1.2e-77	35.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.2	1.2e-77	35.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 481..575 e-value: 3.4E-33 score: 114.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 213..369 e-value: 1.2E-30 score: 109.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 307..339 e-value: 5.0E-7 score: 27.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 304..351 e-value: 2.1E-9 score: 37.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 217..233 e-value: 1.3 score: 9.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 304..338 score: 12.210946
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..209
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 2..580
None	No IPR available	PANTHER	PTHR24015:SF1958	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..580

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20368-RA	Carg20368-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding