Carg20334 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20334
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr18: 11841107 .. 11841605 (-)
RNA-Seq ExpressionCarg20334
SyntenyCarg20334
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACAGCATGCTCGTTCATAATGATGCCAATGGTTTTGGTCTCTTAAGATCGTTAGGCCTCTGGTTATTTTGAGGATTTATTTTTTGTGCTTTAATGTTAGCTGTTTGCTGGTTTCTCAAGTTATTGAATTGAATTTCTTTGCAAGACTATACAATGGATTCACATTTTGATGAGAGAATCAAATGCTGAATGGCCATGGCATGAGAAGCTTGTGTTCAAGGAGTACACTATTTTACTCTTTTCTTTTGCATACTTTTGTTTAAGATACGTTAATTTTCTCTTCTTCTCTGTTTGTTGTTATGTTGAGTCTCTTGCACTCGCAAAAACTATATTTGGTTTTCGAGCTCTACTCTTTGTGTCGTCCATTCACACATTCCTCAGTAGTCTGTAGTACGTCTCACCCATTTCAAGGCCAACTGAATTAACTGTTGTCAATTCAAAGCTTGAACTTAGGATCTTGGAGGGTTTGAGTTGCGGAATTGAAGTGGTCTAG

mRNA sequence

ATGGGAAACAGCATGCTCGTTCATAATGATGCCAATGGTTTTGGTCTCTTAAGATCGTTAGGCCTCTGCTGTTTGCTGGTTTCTCAAACTATACAATGGATTCACATTTTGATGAGAGAATCAAATGCTGAATGGCCATGGCATGAGAAGCTTGTGTTCAAGGAGTACACTATTTTACTCTTTTCTTTTGCATACTTTTGTTTAAGATACTACGTCTCACCCATTTCAAGGCCAACTGAATTAACTGTTGTCAATTCAAAGCTTGAACTTAGGATCTTGGAGGGTTTGAGTTGCGGAATTGAAGTGGTCTAG

Coding sequence (CDS)

ATGGGAAACAGCATGCTCGTTCATAATGATGCCAATGGTTTTGGTCTCTTAAGATCGTTAGGCCTCTGCTGTTTGCTGGTTTCTCAAACTATACAATGGATTCACATTTTGATGAGAGAATCAAATGCTGAATGGCCATGGCATGAGAAGCTTGTGTTCAAGGAGTACACTATTTTACTCTTTTCTTTTGCATACTTTTGTTTAAGATACTACGTCTCACCCATTTCAAGGCCAACTGAATTAACTGTTGTCAATTCAAAGCTTGAACTTAGGATCTTGGAGGGTTTGAGTTGCGGAATTGAAGTGGTCTAG

Protein sequence

MGNSMLVHNDANGFGLLRSLGLCCLLVSQTIQWIHILMRESNAEWPWHEKLVFKEYTILLFSFAYFCLRYYVSPISRPTELTVVNSKLELRILEGLSCGIEVV
Homology
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BLAST of Carg20334 vs. NCBI nr
Match: KAG7013315.1 (hypothetical protein SDJN02_26074, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 7.1e-52
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MGNSMLVHNDANGFGLLRSLGLCCLLVSQTIQWIHILMRESNAEWPWHEKLVFKEYTILL 60
           MGNSMLVHNDANGFGLLRSLGLCCLLVSQTIQWIHILMRESNAEWPWHEKLVFKEYTILL
Sbjct: 1   MGNSMLVHNDANGFGLLRSLGLCCLLVSQTIQWIHILMRESNAEWPWHEKLVFKEYTILL 60

Query: 61  FSFAYFCLRYYVSPISRPTELTVVNSKLELRILEGLSCGIEVV 104
           FSFAYFCLRYYVSPISRPTELTVVNSKLELRILEGLSCGIEVV
Sbjct: 61  FSFAYFCLRYYVSPISRPTELTVVNSKLELRILEGLSCGIEVV 103

The following BLAST results are available for this feature:
BLAST of Carg20334 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7013315.17.1e-52100.00hypothetical protein SDJN02_26074, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg20334 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20334 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg20334 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20334-RACarg20334-RAmRNA