Carg20285 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20285
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr02: 4467203 .. 4468108 (-)
RNA-Seq Expression	Carg20285
Synteny	Carg20285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCTTTCAGTGGATTAGGAATCGGATTGAGTTTGGTTTTCGGGTGCCTTCTGTTTGCTCTTGTTGCCGAGCTTTACTATCTGTTATGGTGGAAGAAGAGAAGCTTTAATTCAGAGGTTGAAGATGAATTCACCAGTTATGCTAAGGAGTTCTTCCATCTTATTTGCTGGAGAAGGAGTTCCTCTTCTTCTTCTTCAATTCAAGCCAACAATTCCCTAAGAAATCCAGAAATTAGAAGCCAAGAACCCGACATTGAAATCGGTTCTAGCAAGGATTTGTTATTGAAATCATCTGGAGGAGAAGATGGAGTGGAGTTGGAGCTGATGAGGCTGCATAATCTTGCAGGCCCTCCAAGATTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAATCAGAAGATCGAAGCAGAAAGGGATCAAGAACAAGAAGCTTAAGTGATCTTATCTTAGCTCTTGATACTCCATTTCTCACTCCTTTGCCTTCTCCTCCATTCAATCCACCCTCTCCCTTGAGTTCTTTCAAACACCATGGATTCAATATAAACCCACTCTTTGAATCATCAACAGATTTCGATTTAAACAGGCTCATATCTTCACCTCCCCCAAAATTTAGATTCTTGAGGGAAGCAGAAGAGAAACTGTACAGAAGATTGATGGAAGAATCTCAGAAAAAAGCTTGTAAAAATGGTGGGTCGATTCAACATCCTGAAACTCAACCCATTTCCAACCCCATAGCTGCAGCTGAAGACGAAGAAGATGATGAGGTTTGTTGTACAAAAGAGAAAGAGCTTCAAAATCATTATGTCTCACAGTATTCTTCAAGTTCTTCACAGATTCTTCCTTTAGCTTCTTCTCCTCCTTCAGGCCGTAGATTTGATCATGTTTTCATTACATAG

mRNA sequence

ATGATTTCTTTCAGTGGATTAGGAATCGGATTGAGTTTGGTTTTCGGGTGCCTTCTGTTTGCTCTTGTTGCCGAGCTTTACTATCTGTTATGGTGGAAGAAGAGAAGCTTTAATTCAGAGGTTGAAGATGAATTCACCAGTTATGCTAAGGAGTTCTTCCATCTTATTTGCTGGAGAAGGAGTTCCTCTTCTTCTTCTTCAATTCAAGCCAACAATTCCCTAAGAAATCCAGAAATTAGAAGCCAAGAACCCGACATTGAAATCGGTTCTAGCAAGGATTTGTTATTGAAATCATCTGGAGGAGAAGATGGAGTGGAGTTGGAGCTGATGAGGCTGCATAATCTTGCAGGCCCTCCAAGATTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAATCAGAAGATCGAAGCAGAAAGGGATCAAGAACAAGAAGCTTAAGTGATCTTATCTTAGCTCTTGATACTCCATTTCTCACTCCTTTGCCTTCTCCTCCATTCAATCCACCCTCTCCCTTGAGTTCTTTCAAACACCATGGATTCAATATAAACCCACTCTTTGAATCATCAACAGATTTCGATTTAAACAGGCTCATATCTTCACCTCCCCCAAAATTTAGATTCTTGAGGGAAGCAGAAGAGAAACTGTACAGAAGATTGATGGAAGAATCTCAGAAAAAAGCTTGTAAAAATGGTGGGTCGATTCAACATCCTGAAACTCAACCCATTTCCAACCCCATAGCTGCAGCTGAAGACGAAGAAGATGATGAGGTTTGTTGTACAAAAGAGAAAGAGCTTCAAAATCATTATGTCTCACAGTATTCTTCAAGTTCTTCACAGATTCTTCCTTTAGCTTCTTCTCCTCCTTCAGGCCGTAGATTTGATCATGTTTTCATTACATAG

Coding sequence (CDS)

ATGATTTCTTTCAGTGGATTAGGAATCGGATTGAGTTTGGTTTTCGGGTGCCTTCTGTTTGCTCTTGTTGCCGAGCTTTACTATCTGTTATGGTGGAAGAAGAGAAGCTTTAATTCAGAGGTTGAAGATGAATTCACCAGTTATGCTAAGGAGTTCTTCCATCTTATTTGCTGGAGAAGGAGTTCCTCTTCTTCTTCTTCAATTCAAGCCAACAATTCCCTAAGAAATCCAGAAATTAGAAGCCAAGAACCCGACATTGAAATCGGTTCTAGCAAGGATTTGTTATTGAAATCATCTGGAGGAGAAGATGGAGTGGAGTTGGAGCTGATGAGGCTGCATAATCTTGCAGGCCCTCCAAGATTTCTCTTCACCATTAAAGAGGAAACCAAAGAAGATTTAGAATCAGAAGATCGAAGCAGAAAGGGATCAAGAACAAGAAGCTTAAGTGATCTTATCTTAGCTCTTGATACTCCATTTCTCACTCCTTTGCCTTCTCCTCCATTCAATCCACCCTCTCCCTTGAGTTCTTTCAAACACCATGGATTCAATATAAACCCACTCTTTGAATCATCAACAGATTTCGATTTAAACAGGCTCATATCTTCACCTCCCCCAAAATTTAGATTCTTGAGGGAAGCAGAAGAGAAACTGTACAGAAGATTGATGGAAGAATCTCAGAAAAAAGCTTGTAAAAATGGTGGGTCGATTCAACATCCTGAAACTCAACCCATTTCCAACCCCATAGCTGCAGCTGAAGACGAAGAAGATGATGAGGTTTGTTGTACAAAAGAGAAAGAGCTTCAAAATCATTATGTCTCACAGTATTCTTCAAGTTCTTCACAGATTCTTCCTTTAGCTTCTTCTCCTCCTTCAGGCCGTAGATTTGATCATGTTTTCATTACATAG

Protein sequence

MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRRSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFIT

Homology

[Close]

BLAST of Carg20285 vs. NCBI nr
Match: KAG6605469.1 (hypothetical protein SDJN03_02786, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035414.1 hypothetical protein SDJN02_02210, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.0 bits (1525), Expect = 2.8e-165
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300
           TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI
Sbjct: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300

Query: 301 T 302
           T
Sbjct: 301 T 301

[Close]

BLAST of Carg20285 vs. NCBI nr
Match: XP_023532268.1 (uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 582.8 bits (1501), Expect = 1.7e-162
Identity = 297/301 (98.67%), Postives = 299/301 (99.34%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIR+QEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300
           T  ISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI
Sbjct: 241 TPAISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300

Query: 301 T 302
           T
Sbjct: 301 T 301

[Close]

BLAST of Carg20285 vs. NCBI nr
Match: XP_022947973.1 (uncharacterized protein LOC111451693 [Cucurbita moschata])

HSP 1 Score: 582.0 bits (1499), Expect = 2.9e-162
Identity = 300/309 (97.09%), Postives = 301/309 (97.41%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQI--------LPLASSPPSG 300
           TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQI        LPLASSPPSG
Sbjct: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQIHSSSSSQVLPLASSPPSG 300

Query: 301 RRFDHVFIT 302
           RRFDHVFIT
Sbjct: 301 RRFDHVFIT 309

[Close]

BLAST of Carg20285 vs. NCBI nr
Match: XP_023007066.1 (uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima])

HSP 1 Score: 571.6 bits (1472), Expect = 3.9e-159
Identity = 292/301 (97.01%), Postives = 294/301 (97.67%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIR+QEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSP SSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPFSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300
           T  ISNPIAAAEDEEDDE CC KEKELQNHYVSQYSSSSSQILPLASSPPSGRR DHV I
Sbjct: 241 TPAISNPIAAAEDEEDDEFCCRKEKELQNHYVSQYSSSSSQILPLASSPPSGRRIDHVSI 300

Query: 301 T 302
           T
Sbjct: 301 T 301

[Close]

BLAST of Carg20285 vs. NCBI nr
Match: XP_023007067.1 (uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima])

HSP 1 Score: 541.6 bits (1394), Expect = 4.4e-150
Identity = 278/288 (96.53%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIR+QEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSP SSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPFSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASS 289
           T  ISNPIAAAEDEEDDE CC KEKELQNHYVSQYSSSSSQIL  +SS
Sbjct: 241 TPAISNPIAAAEDEEDDEFCCRKEKELQNHYVSQYSSSSSQILSSSSS 288

[Close]

BLAST of Carg20285 vs. ExPASy TrEMBL
Match: A0A6J1G835 (uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC111451693 PE=4 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.4e-162
Identity = 300/309 (97.09%), Postives = 301/309 (97.41%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQI--------LPLASSPPSG 300
           TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQI        LPLASSPPSG
Sbjct: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQIHSSSSSQVLPLASSPPSG 300

Query: 301 RRFDHVFIT 302
           RRFDHVFIT
Sbjct: 301 RRFDHVFIT 309

[Close]

BLAST of Carg20285 vs. ExPASy TrEMBL
Match: A0A6J1KZH4 (uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 1.9e-159
Identity = 292/301 (97.01%), Postives = 294/301 (97.67%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIR+QEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSP SSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPFSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGRRFDHVFI 300
           T  ISNPIAAAEDEEDDE CC KEKELQNHYVSQYSSSSSQILPLASSPPSGRR DHV I
Sbjct: 241 TPAISNPIAAAEDEEDDEFCCRKEKELQNHYVSQYSSSSSQILPLASSPPSGRRIDHVSI 300

Query: 301 T 302
           T
Sbjct: 301 T 301

[Close]

BLAST of Carg20285 vs. ExPASy TrEMBL
Match: A0A6J1KXJ9 (uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499670 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150
Identity = 278/288 (96.53%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60
           MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR
Sbjct: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVEDEFTSYAKEFFHLICWRR 60

Query: 61  SSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120
           SSSSSSSIQANNSLRNPEIR+QEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR
Sbjct: 61  SSSSSSSIQANNSLRNPEIRNQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGPPR 120

Query: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLSSFKHH 180
           FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSP SSFKHH
Sbjct: 121 FLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPFSSFKHH 180

Query: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQHPE 240
           GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQ+PE
Sbjct: 181 GFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACKNGGSIQNPE 240

Query: 241 TQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASS 289
           T  ISNPIAAAEDEEDDE CC KEKELQNHYVSQYSSSSSQIL  +SS
Sbjct: 241 TPAISNPIAAAEDEEDDEFCCRKEKELQNHYVSQYSSSSSQILSSSSS 288

[Close]

BLAST of Carg20285 vs. ExPASy TrEMBL
Match: A0A6J1D323 (uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017117 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 2.4e-125
Identity = 243/307 (79.15%), Postives = 272/307 (88.60%), Query Frame = 0


Query: 3   SFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVE-DEFTSYAKEFFHLICWRRS 62
           SFSGLGIGLSLVFGCLLFALVAELYYLLWWKK SF+SEVE DEFT+YAKEFFHLICW R+
Sbjct: 4   SFSGLGIGLSLVFGCLLFALVAELYYLLWWKKSSFSSEVEDDEFTNYAKEFFHLICWERA 63

Query: 63  SSSSSSIQANNSL---RNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAGP 122
            +SSSS+Q NNS     NP++R+QEPD+EIGSSKDLLLKSSGGEDGVE+ELMRLHNLAGP
Sbjct: 64  PASSSSLQPNNSRPNETNPQLRNQEPDMEIGSSKDLLLKSSGGEDGVEVELMRLHNLAGP 123

Query: 123 PRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPPSPLS--- 182
           PRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLIL  DTPFLTPLPSPP   PSPL+   
Sbjct: 124 PRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTADTPFLTPLPSPPLKAPSPLNPFG 183

Query: 183 SFKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKKACK--NG 242
           S+KHHGFNINPLFESST+ +LNRL+SSPPPKFRFLREAEEKLYRRLMEE+QKKA +  N 
Sbjct: 184 SYKHHGFNINPLFESSTELELNRLLSSPPPKFRFLREAEEKLYRRLMEETQKKASRSNND 243

Query: 243 GSIQHPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASSPPSGR 301
           GS Q+ ET+ IS P  AAE+EE+   C T+EKE QNH++SQ+SSSSSQ+LPLASSPPSG+
Sbjct: 244 GSAQNSETKAISKPKTAAEEEEEG-FCFTEEKEPQNHHMSQFSSSSSQVLPLASSPPSGQ 303

[Close]

BLAST of Carg20285 vs. ExPASy TrEMBL
Match: A0A5A7V7S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00610 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.8e-110
Identity = 227/312 (72.76%), Postives = 252/312 (80.77%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSF-NSEVEDEFTSYAKEFFHLIC-- 60
           M SFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRS  +S+ EDEFT+YAKEFFHLIC  
Sbjct: 1   MTSFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSITSSQAEDEFTNYAKEFFHLICWD 60

Query: 61  WRRSSSSSSSIQANN----SLRNPEIRSQEPDIEIGSSKDLLLKSSGGED-GVELELMRL 120
           W++ SSSSSS+Q  N    + RN E+R+QE DIEIG SKDLLLKSSGGED GVELELMRL
Sbjct: 61  WKKGSSSSSSLQQPNNSRENQRNLELRNQESDIEIGCSKDLLLKSSGGEDGGVELELMRL 120

Query: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILALDTPFLTPLPSPPFNPP- 180
           HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLIL +DTPFLTPLPSPPF P  
Sbjct: 121 HNLAGPPRFLFTIKEETKEDLESEDRSRKGSRTRSLSDLILTVDTPFLTPLPSPPFKPTT 180

Query: 181 ---SPLSSFKHHGFNINPLFESSTDFDLNRLISSPPPKFRFLREAEEKLYRRLMEESQKK 240
              +PL+SFKHHGFNINPLFESS D DL+RL+SSPPPKF+FLREAEEKLYR+LMEE+Q K
Sbjct: 181 SPLNPLNSFKHHGFNINPLFESSNDLDLSRLLSSPPPKFKFLREAEEKLYRKLMEEAQNK 240

Query: 241 ACKNGGSIQHPETQPISNPIAAAEDEEDDEVCCTKEKELQNHYVSQYSSSSSQILPLASS 300
             KN GS+Q  E + IS P  A  +EE              H+VS YSSSSSQ+LPLASS
Sbjct: 241 HNKNAGSVQSSEIRAISIPKEAVREEE-------------GHHVSPYSSSSSQVLPLASS 295

[Close]

BLAST of Carg20285 vs. TAIR 10
Match: AT5G59350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 175.6 bits (444), Expect = 5.9e-44
Identity = 123/247 (49.80%), Postives = 155/247 (62.75%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLL---WWKKRSFNSEVEDE------FTSYAKE 60
           M + SGLGIGLSL+FG LL ALV E+YYLL     KKR  + E E+E         YAKE
Sbjct: 1   MKTISGLGIGLSLMFGFLLLALVGEVYYLLRCKKHKKRVISQESEEEKEEEQQQNGYAKE 60

Query: 61  FFHLICWRRSSSSSSSIQANNSLRNPEIRSQE---PDIEIGSSKDLLLKSSGGEDGVELE 120
              L C+++      S+Q NN  R  E+   E   PD+E+G  K L    +GG+ G E E
Sbjct: 61  LIQLFCFKK----PQSLQQNNGGREGEVSMNEDGNPDLELGLMKHL----NGGDLGFEAE 120

Query: 121 LMRLHNLAGPPRFLFTIKEETKEDLESED--RSRKGSRT--RSLSDLILALDTPFLTPLP 180
           LM+LHN     RFLFTI EETK DLESED  +SR GSR+  RSLSD+    +TP  TPL 
Sbjct: 121 LMKLHN----QRFLFTIMEETKADLESEDGGKSRLGSRSRRRSLSDVPNDCNTPGFTPLA 180

Query: 181 SPPFNPPSPLSSFKHHGFNINPLFESSTDFDLNRLI---SSPPPKFRFLREAEEKLYRRL 229
           SP     SPL S+ HHGF  NPLFES  + + N+     SSPPPKF+F+R+AEEKL +RL
Sbjct: 181 SPK-KSSSPLESYPHHGF--NPLFESDGELEFNKFFRSSSSPPPKFKFMRDAEEKLRKRL 232

[Close]

BLAST of Carg20285 vs. TAIR 10
Match: AT2G39560.1 (Putative membrane lipoprotein )

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-28
Identity = 99/252 (39.29%), Postives = 135/252 (53.57%), Query Frame = 0


Query: 1   MISFSGLGIGLSLVFGCLLFALVAELYYLLWWKKRSFNSEVE---DEFTSYAKEFFHLIC 60
           M S S +G+ LS+VFGCLL AL+AELYYLLW KKRS     +   D  T   +E   + C
Sbjct: 1   MRSLSSVGLALSIVFGCLLLALLAELYYLLWCKKRSTTRRPDFRNDYSTPGTRELLFIFC 60

Query: 61  WRRSSSSSSSIQANNSLRNPEIRSQEPDIEIGSSKDLLLKSSGGEDGVELELMRLHNLAG 120
              S++ SSS  +++S  NP+    +    + +                       N+ G
Sbjct: 61  CSSSTNPSSSSPSSSSFSNPKPIDTQQQCPLNNG--------------------FENVGG 120

Query: 121 P---PRFLFTIKEETKEDLESED-RSRKGSRTRSLSDLILALDT-----PFLTPLPSPP- 180
           P   PRFLFTI EET E++ESED  S KG   +SL+DL L +++     P+LTP  SP  
Sbjct: 121 PGLVPRFLFTIMEETVEEMESEDVVSTKG---KSLNDLFLNMESGVITPPYLTPRASPSL 180

Query: 181 FNPP-SPL--SSFKHHGFNINPLFESSTDFDLNRLI------------SSPPPKFRFLRE 225
           F PP +PL   S       I+ LFESS+D + NRL+            SSP  +F+FLR+
Sbjct: 181 FTPPLTPLLMESCNGRKEEISSLFESSSDAEFNRLVRSSPLSSSHSPSSSPLSRFKFLRD 229

The following BLAST results are available for this feature:

BLAST of Carg20285 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605469.1	2.8e-165	100.00	hypothetical protein SDJN03_02786, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023532268.1	1.7e-162	98.67	uncharacterized protein LOC111794467 [Cucurbita pepo subsp. pepo]	[more]
XP_022947973.1	2.9e-162	97.09	uncharacterized protein LOC111451693 [Cucurbita moschata]	[more]
XP_023007066.1	3.9e-159	97.01	uncharacterized protein LOC111499670 isoform X1 [Cucurbita maxima]	[more]
XP_023007067.1	4.4e-150	96.53	uncharacterized protein LOC111499670 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg20285 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G835	1.4e-162	97.09	uncharacterized protein LOC111451693 OS=Cucurbita moschata OX=3662 GN=LOC1114516...	[more]
A0A6J1KZH4	1.9e-159	97.01	uncharacterized protein LOC111499670 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KXJ9	2.1e-150	96.53	uncharacterized protein LOC111499670 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1D323	2.4e-125	79.15	uncharacterized protein LOC111017117 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7V7S7	4.8e-110	72.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Carg20285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59350.1	5.9e-44	49.80	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G39560.1	2.6e-28	39.29	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..257
None	No IPR available	PANTHER	PTHR34054:SF6	TRANSMEMBRANE PROTEIN	coord: 1..290
None	No IPR available	PANTHER	PTHR34054	EXPRESSED PROTEIN	coord: 1..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20285-RA	Carg20285-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane