Carg20263 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20263
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NOT2 / NOT3 / NOT5 family
Location	Carg_Chr02: 4592033 .. 4605243 (-)
RNA-Seq Expression	Carg20263
Synteny	Carg20263

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCCTCCAATCACAAAGCGAAGGGAAAGGGCGAAGACTGCGTTTCGCTGCATCGCGGTCGCAGACCGACGTTCTTTTCTTCATCCTATAAATACTGTATCACTTCCCGAATTTTGTTCCTTTCTCTCTCTTCATTCTCCCTTACATCTCTCATCTGAATTAGGGCACACAAACACGATCTTTGTTTCTGAACCAGACATCTCTCCGATCTGCTATTCAGGTTATTTCCTATCTCTGATTTTTCTTATTCAGATTTACTCATTTCGATTTGTTATGAATTCGATTCCTGATCTTCTCTTTCTCGTCACTTCTTCTTCACTGTTCGTCAAATCCTCTGTTCATCTACATTGCCGATCCTAGGGTTTCGGGATTTACTTTCAAGTTCTCGTCGGATGTGGTTCTTTTCTGATGGATTATTAAGTTTGAACTAGTTGAAACTGCGTGTGGTTTAGAAGGAACAGTACAGAAACACTACAATATTTCCCGGTTTGTTTTTAATATTCTTGTTTCGATAGTTGTGGGAGAAGAATTCACTGACTGAATATCTATATCTCGACCTCCCCATGTTTCTCTTGGATTTCCTGAACGAATGCTTTTCAGTAGATGCAGTTAGTCATTTGTACGTATAGATGACAATATCGTGTTTGTCTATGGAGGATTCTCAAGAGTTTCGCCCGCTTTTAGACATACAATATCTTTCGAGCTACTGATAGGTTTCCTCATGGCTTGAAGTCAGTCGCACGTTACTTTTAGTAGTTACACGGGCCCTCATTCATGTTAAACCCATGTTTTTGTTTTCTTTTTTCATTTCTGTTCGACTTCTCTGGCCGCACGTCTTAGTTTTAGAAGCCGCCTAGACTCCAGTGACTGGGAGATTGCAAAACGAAACTCAGTTCTAAAAGTGGATGTACATATTTGAAGCATATCTGCACTCCTTGTTTATCATATTTTACGGACTCTACAGCTGGGTTTAGTTTTGGAATGTTTTTCTTACTTCTGGGCTTACTCTTATACTATACTGTTATTTTTCAGGGTGTCATTTGATTAGCGATAAAGCTTTACAAATAGCTTCTCTATCTATTGGCTTCTCAAGACTGGAACGGCTGTTTCTATGAAGGAATGAAATTTTCATAATTTATATTACTATCACCTCATGCCATGTCGGGTTTACTTAATGTACTGTCCGCAATCTACATTTTTCTTTAAGATTGCATTGGAACATGTGTATTGGGTTGAGTTACATATTATTTCTTGAAGTTTATTACAGATACTGTCATGCGTTACAGATTCTGTGCAGTGGCATTGACCTTTCAGAAACTAAGAAATCCTAACCCTAGTTGTTGTTGTTGCTGTTGTTGTTGTTGCTTTTAAGTTCATAGTCTAGTTAGGATTTCAGTTTTAATTGGCTCAACATTTTTTTGTTAGGTAAGAACGTATCTCTTTCAATTATAGAAATTCCATTCAATTGTTTCCATTGTTCTCATTTGGTTTTTGGTTGTTCTAGGTTAATTGAATCTTATTTTTATAACAATCTGCTAAATGAGCACGTGCCTTTATTGTGTTAACTTATTTTGACATAGTCTTGTGCATTTTTGTTGATGTTGGTGCTGTTTCACGTGCCTTCATTCTTTATGATAAATAATTTATCTTCTTCTCCCTTTTATGTTGATACATTGAAATTCTACTGTAAACTTTTGCGATTCAAGTTCAAATTTGCACAATGATACATGATTTTTAAATTTTCAAAGCTCTTGTTATTCGCAGTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGTAGGTGCATGTGTCTTAGAGTTGTGTAGTTTTCACTCAAATTTATGAAATTGAGAGGTCTCAATTTCAGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGAGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGGTATCTTTCAAAGTCAGGCTATTTATTCGTAATTACCATCAGTTGCACCTGTAGTTTCTTTGAGTTGCATTTATTGTGCTCACAAAAGATTAGCTGCTGCATGATAACATATTTTAGACATTTTATCACTCTGGTAAGCAAAGACGAGCATGCTTATTTATGATTAATTCTGAAGTACTGTTGTAATTATCACTATAGAAGAGATTTACCATCTAGTAACTGTGTTGAGGAAGAAATGATGGAGAGCTGCTTTACAAATCAGACATCAGATCATGATTTTTATAATTAGCATGGTATAGGGTTTTCTGGGCATGAAATGACATCTTTAATAGATCTAGAAGCAATGAAAGTGAAACCCTAATCTTATCCTCTCAAAACCCCTCATAATTGTTTATGTGCTTTCACTACATTTTGACTGTTGCGTTCTATTCTGTAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCGCAAATAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTCTGTCTACTTCTGCTGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTACTGGCGGGGGTTTGTCATTACCTGGTCTTGCTTCTCGTCTAAACCTTGGTGCGAATAGTGGATCTGGAAGCTTAACTGTGCAGGGACAAAACCGTTTAATGAGTGGTGTGCTTCCACAAGGTACAATCCCAATTCCTTGAATTTGTGTGCAAAATACCTATTTTATGAGGCTATATTGAATGGAAATGCATTCATTACTATGTTTTAGTTAAAAATGTTCTATGCTACTTTTTCGTATATGACATTTTCTTGCTTCAGGATCTCAACAGGTTATTTCTATGTTAAGTAATTCTTATCCAAGTGCTGGAGGTCCACTTTCCCAAAACCACATACAGAATGTGAATAGTCTGAATTCTCTAGGGATGTTGAATGATGTGAACTCCAGTGACAATTCCCCTTTTGACATTAATGATTTTCCTCAGTTGACAAGTCGTCCAAGTTCTGCAGGAGGGCCTCAAGGACAATTGAGTTAGTAACTAGACATTGTTGGTTTTGTTTGTTTTTTTTTTCTTTTTCTGTCTTCGCCAATTTTGATTGTTAGAAATGTCATGTAATTGTTTCAGGTTCCCTGAGAAAGCAGGGCCTTAGTCCTATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAGTGAAGACTTCCCAGCATTATCTAGATTTAAAGGTGCAAATCCCTTCTTTGCTTCTACTAGGTTTCATTCATGTAAATCATAAGCCAAAACTTCGTTTACTGCTCTCTACCCTATTCTTTTTAAGATTGAATACAACAATTTTGGATAACTGTTGTTGGGAATTATCTCAGTTGATCATGAGCAATAGCTGAATAGATTTAGTAGAATTTCAGATTTCGTTTTTCAAGTTTTCCCTTGCAATTATTAAGCTCAAGATCATCTTCATGGAGAGTTCTATTTTTCTGTCATCTGTTTGGATTTTAAATTCATAGCACGTAGTAATGTCTTGCATACTTTGAATATGAAACAGAACACTTTCCATCATTGATTATAGTTCTAGATCTTGTGCAGGTGGCAATGTTGATTATGGCATGGACATTCATCAGAAAGATCAACATGAAAATTCTGTGCCTATCATGCAGTCTCAGCAGTTCTCTGTGGGAACTCCTACTCTCTCATCTGCTGACTATCCTCATTTGGTGATGTGCTGCTTAACAACTTTTCCCTTGTTTTGATCTTCAGATTGGGAGATCTGCTGGATTTAACCTAGGGAGCACATACTCACATCGACCCCAGCAGCAGCAGCAACATTCTCCTGCAGTCAGCAACAGCACGGTGTCCTTTCCGCCTGCTAATAATCAGGATCTCCTCCATTTACATGGTTCAGATATATTTCCATCTTCACATGCTGCATCCTATCACCAGCAGGTGTGCAATTCTATTAATGCAATTCTAAAGGAAGTAAATATTTTTACCTTGCAGGCATAATCAAACTGTTCCTTTACTTAGATATTTCCATTCTTGGTGTTTTATCAACTGAAATACAGTCTCAACCTTTTATTCTCAAGTACTAAAAAATACTCAATGGGTTTAAATGTTTCGTAGATCAATCAGTTGCCTGTATGTCTTAATGTCTTCCCCATTGAATTTTTTCAATATCAACATTTCATTTTCATATTCAGTCTAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAACTCAGTGTCTGGAATGGGTTATGACCAACTTATTCAGCAATATCAGCAGCATCACAGTCAACCGCAGTTCCGGTTGCAACATATGTCTGGTGTTAGCCAATCATTTAGAGATCAAGGGATGAAGTCTATGCAGGCAGCTCAATCTTCTCCTGACCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCGCTCGGGATTGATTTGACCACGTTAGGATTAAATTTGAATTCAGCAGATAACCTTCACAAGACTTTTGGTTCCCCGTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTTCTCTACATGTGAGTCTCTTCCCCTTTCCTCTCCCAGTCAACCTTCCTGCAGTTTTTATTTTTTTTTCTGAACTGATCATTGTTTTGGTTGACTACAGCAAGGATACTTCTCAAAATTCACTTTGGAAACGCTGTTTTATATATTTTTCAGGTGTGGTATATTTAAATAATTTGAACGTATTAATTTTGTAATCTTAATACATATTATTCTGATCTGTCTCGTTCTTCATCAGCATGCCCAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTGTAAGCTCTTATTATATATACCTACTGTGCAGTTTGTTATTTTCACCAAAGTTATATAAAGATAGTTATGGGTAGAATTTCCCCTAAGGGCGATGTTGCCAACATTTTTTTGTTTGGTAGTTATAATAGAGGCTGGTTTTATCACAAAGAACATCGATTCTGGTTCATTCGGGTCTCTAATATGGAACCGCTTGTGAAAACTAGCTCGTACGAGAGAGGATCTTATCTCTGTTTTGACCCTCACACATTTGAAACTGTCCGCAAGGTTTGGAGTTTAATCTATATTTTTTCATTGAATTGAGTTGATGATAGACCCATCCATTGCTCTGCTGATGTTACGTTGAATTGTGTTCAGGATAATTTTGTGCTTCACTACGAGATGGTGGAAAAGAGACCAGCTCTACCGCAACATTAGCCATTTTCTTTTTCCTTTTTATTAAATGTAAAAAGGTAATTTGTGGATTTTTGTGTTATTAGCCATAGCTGTGTTTGTAGAAGTAATATTTTGTTAAATTTGATAATTTTATATCCATTATGATGTGGGCCCCCTTGTTATTGTAATGAGCCGTTCTTGCTTCCCGGAAAAAGACAACTGTTACGAGGCATATGTTTGATCACCCGTCGTTCTACATGATTATATATTTGGTTATTAGCTTTTAGTTTAGTTTGTTCAACTTTATCATATTAATAATAATAAATACCCAATTGATTAAATACCTTACTGTGCCTGTTTATGTGGTTATGGGTTTGGATTCACTTCAATATATTTACTCTCACCATTTCTCCACAAATCCCATTATGGTTTGTGCATTAAATTAATTTTATTTCTAGTTATTTTCTTAATCTCTATTACTTTTCTTTATTATTTCTTAATAATGGTTAGAGTCATAGTGATATAATTTTTTTTATGAGATATATTTGATAGAAAAATAATAATTATTAGTTGAAGAAAGATTAAAAGAAAAAGTGAATTTTCTTATATAAATGACAACAAAATTTTAAAACTAGTATATCATAAAATTTTAAATTAAATCGTACTGTAATAAGCACTCAAATTAAAAATCTTATGACCGTTAATAAATTTTAATTAATATGTCCTTGACCTGTTCTTTTCACAGGTCATAACTCGAATTAGTTCTTATTGATTAACTTTAAATAAAAATATTTAATTTTTTAATCATTCTCACAACAGATAAATATGATTTAAATTAATAATTTTTAACATAATTCAGTTTTTTAAAATCAAAATCAAAATTTTAATATATTTATTTCGTTTAATAATATTTAAGAGTGAAAAAAATTTTAAAATTATAGTTTTTTAATTGAATTAAAAAAAGAAAAGTCTAATTAGTATTATAATTTTTTTTAAAAGATAATTAATTTAAAATTAATTGTAGTAATTTGGAGGTTTATGAGAATCTAACGTTATTATTACAGAACAAATAAAAAAGAGAGGGAAACTGTTTTGGTGGGTAAAGTTTCCGACTTTCTCTGTGATTCTCTTTCCCTCTCTCTTCCATTAGATTTAGGGCACACCAACACAATCTTTGTTACTCAACCACACATCTCTCCGATCATTATTCAGGTACTTTTTCATCTCTGATTTCTTTGATACAGACCAATTCCTTTCCATTTGTCATGAATTCGATCTCCGATCTTCTCTCCTTCTCATATCTTCCATATCCCTTCTTCTTCGTCCCCACCCTTCTTCATTTATTCTGTTCATCTATCAATTTCCATCCATTCTAGGGTTCCACGACATTCTTCAAAAGTTCATGTTGTTTCTTGTTCTACTCTGAAGGATTCTATAGTCCGAAGTAGTGTTGAAACTGCTTTTGGGCTAAGAAGAATCAGTGCAGAAACACTGCTGCATTTCTTGGTTTAATTTTTTTTTTTTTGGATATATCTATACCTAGAACTTCCCTGTAGTTCTCTTGGAGCTCCTGAATATGCTCCTCTTAACTTATATATTTGTTTATGGAAAATTCTCAAGATCATCCATGTCGTATCCCGCTTCAGGCTTGCTTGCAATTCCTGTAGAGCTACTGACACCATCCTATAGCTTCGAGTCAGTCTCATGTTACTTTTAGTAGTTCAACAGGACTTCATTCAGGTTAAACCTATGGGTTTCTTATGGAGGTTTGGTTCTAATACTTTGCATTTCGATTCCACTTCTCTCGCTAGACAGTTTTAGAAGCTGCCTGTACTCCAGTGACTGAAATTGAATGTGAGATGACAGAAAAATACTCGGTTCTAAAAGCGGCCTTGGACTTGTAATTGTCTTTTTGAGTCTACAAGGGAATGGTAATATGTCTGGAACATATCCGTACTCCTTGGTTTACCTATTATAGGCCCTGCAGTCGAATTGGGTTTATTTTTGGTGTTTTTACCTTACTTCTGAGCTAACTCTTAAATATAATTTTATTTTCAAACAGCTTCTCTATCTTCTGGCTCCCCAAAGACTGGAACAGCAGTTGTTTTTGACGAAGGAATGAAATTTGCCTAATTCATTTTACGCCTACCTCATGCCATGTCGGGTTTACTTAATGTATTGTCTGCTATCTATGTATCTATTTGTCTACGATTGCATTGGGACGTGTATGGAGTTGAGTTGCAGATAAAAAAAAATTACAAATGTTTTCATTTCTTATCTGGTTCTGTGCAGTACTCATTGACCCTCACGTATAGATTGGGGACCTTGTAGGAGAAATTCCAAATCTTGGGGTGTGCGTGTGTGTTGTTTTTCCATTTTTTTTTTTTAAAATTTAATTTAAACTTCATGTAGGATTTTCATTGTAATTGGTTCAAGATTTTCATAGTATCCTTCTTTGTTGGGCTTTCTTTTTGTATGCCCTTGTATTTTTTCATTTTTATCAATGAAAGTTTGGTTTCATCTAAAAAAGGTGGTTCAATATTTTCTTGTTGGATACAAATGTCATTCTTTTTATTATTGAGATTCCATTTTAATTGAATTCCTAATTCTTATTAGATTTCCGACTGATCTTGGTTGATTTAATCTTATGTTTATAACTATCAGCCACATAAGCACGTGCATTACATAAGCACGTGCATTTGATGTGTTAGCTTGTTTTGACGTAGTAGCCTGTTTTATGTGCTGCTCTCATTCCTTGTAGTAAATGATTTATCATCCTCACGGTTTTATGTTGATGCATTATAATTCTACTGTAAAATTGTGTGTCAAGTTTAAAATTGCTCATGAAAACATGGTTTACTTATTGCCAAAGCTTTTGTTATTTGCAGTCATCTCTTAATGGATCGGCTTCAAATATCCCAGATGGTGCTGGGCGATCTTTTGCTACCTCATTTTCTAGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCTGGTGGGTGCATATTCATGGAGTCTCTGTAGTTAGTTTTCTTTCAAATTTATGAAACTTAGAGGTCTCAATTTTCAGGAACCATTCAAGGGTTGCATAACATTCATGGAAGCTTCAATATTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGTACACTTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTCTCTCAGGTATTTTTCCAAGTGCAGGCTATTTATTCATAATTCAATGTCATCTTTATTAATTGAGATCGTGAGCATGAGTTTTCTCTGAAGTTTTTTTGAGTCAAGTTTATGGTGCTCAACAAGAATTAGCCGTTTATGAAGTTTTTTCTATATGATCACTCTGCCTAGCAAATACAATCACTCTTTTATGATTAATTTTGAAAGACTAGACAATTATTGTTATAAAAGAAATTGACCAGTTAATAGCTTTGTCGATGAATGAATGATTGAGAGTTACATAGCGAATAGGATATCGGATTGTAGTGTTTATGATTTGACTTGATATTGGACTTTTTTGAGCATGAAGTTTATATTTAACTATGACTTGATATTGGACTTTTTTTAGTTCATAGCTTTACCTTTTTTTCTTTTTTATTTACAAAACTCTTGTAATTGTTTATGTGCTTTCACTCCATTTTTACTGTTTTCTTTTCTTCTTTAGTTGTCTCACAGCAGCTCTCACGGGCACTCAGGAGTTGCAAATAGAGGAGGTATGAGTGTTGTAGGAAATCCTGGATTTAGTAGCAGCACAAATGCAGTTGGTGGTTCTATTCCTGGGATTCTGTCCAGTTCTGCCGGTATTGGTAATCGAAATACTGTTCCAGGGTTGGGTGGATCTCCAATTTTGGGAAATGTAGGTCCTCGGATCACTAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGTACAATCCCTTGAATTTCTATATAAATGCTTTTGTCATTATTCGTAGTAATATTATATCCTCCCTTTTGTACTACTTTCTCTAAAATAAAAGGAACATATTGGAAATGAATCATTTTGTTTTGTTTGAAAGAGTGATGTGCGACATGTGGAAGCTATTTACTCATTTTACTTTGTTTTCTAGTACTATTTTATTCTATGTTCATATTTATGTGTTATTATTATTATTAATATTTAAAATTTTACATAAGAAACTAGAGAACTTTATTGAACTGCCAAGCAACAAAAAACAAGGGAGATACCCCTGCTCAGCCAATGGTTACAAAATAGAAGTGCAATTTGCAGAAATATGCACAAAATGCTACAAAATTTATGTGTGATGTATATGTTATTTATGATAGAGTTGTGCTTGTTTACTTTAGTCTGATTAATATTTAATTCTTATGCTATATTGACCAAATAATGGAAATGCATTCATTACTATGCTTGTATTTATATATGTATATGTATATGATATGTGTGTGTATATATATATATATGTATGTGTATGTATGCATGTATGTGCTACCTTGTATACAAGTGTTCGTTGCTATTTTGACGAAGATGACATTTCTTGCTTCAGGATCTCAACAGGTCATTTCTATGTTGGGTAATTCTTATCCTAGTGCTGGAGGTCCCCTTTCCCAAAGCCACATGCAAAGTGTGAATAGTCTGAGCTCTCTGGGGATGTTGAATGATGTGATCTCTAATGACAATTCTCCTTTTGATATCAACGATTTCCCTCAGTTGAGTAGTCGTCCAAGTTCTGCAGGAGGTGCTCAAGGACAATTAAGTTAGTAACTAGACATTGATGAATTTCTTTTTAATAAATAATTTCAGTTATTATTATTATTATTATTATTGTATATCTCTGCACCAATTTTGACCATTAGAAATGTCATGTAAACATTTCAGGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGCAAATCCTTTTGTTTCCAGTCAGATGCATTCATGTAACTCATAAGACATAGCTTCGGTTTTTTCCTCTAATTTTTTTCAAGAATAAGTACAGTAACTTTGGAAAACTATTGCTTGTAAATATCCTAGCTGACCATGGTAGTTATAGCTGAAAAGATTAAATAGAATTTCAAATTCATTATTCAAGTAGGCAATTGCAATTATTAAGCTCAGCTGCTACTTGGTGACTTCTGACTTGTTTTTCTTTTTTCAGCTTGAATTATCAATTACATACGCTAACCTTTTGCGTACTTTGGATTTAAAACACTTCCTTTTATTGGTTATAGTTCTAGATCTTGTGCAGGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTGTGGGCACTCTTTTGCTCTCTCTTCTGCTGACTATCTCATACGGTCATGGGCGGGCTAGTAAGCATTGTTAACATTTCTGTTTTGATCTTCAGATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTGCATGGTTCTGATATGTTCCCATCCTCACATGCTGCATCCTATCACCAGCAGGTGTGCTTTTTTATCACTGTAAATGAAGATTCCCCCCCTTGCATTGAAGTTTCACTTTGCAGGCATAAGGAATTGACCAATATATTTTTATTCTTGGTTTCTTTATTAACTTGAAAGCCAATCATTCCCATGTATTATATGAATTGAACGGGTGTAAATGTTTTGTAGATCAATTATAGCCTATGTCTTAAATCTCTTTTCCAATGAAGTTTTTCAACATCAACATGCCTTTGTTTTTCTTCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCACCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATCTATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGCGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGTTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATGTAAGGTTCTTTACCTTTTACATCCTCCTCCTAGTCTATGTGAAACTTTCAACAGGTTCTTCTCAACTAATATTTTTTTTGTTAACTGCAGCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGGTACGGTATATAAATACTTCAACGCTCTTTTTCTCCTTTTTTTAACTTTTGTTATATAATTCTGCTCTGTCTTGTCCTGCAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTGTAAGTCTTATTATTGACATTGTGCGGTTTGTTATTTTGACCATAAGTAATTTATGGGCGTAACTTAAGCTTGGACCAACCTTTTTTTGTATAGTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAAAACTTACGAGAGAGGATCGTACCTCTGTTTCGATCCCCAAACATTTGAAACCGTCCGCAAGGTTTGTACTTTGTCAATACTTTTCATTGAAATGACCCATACCACTGCTGCCCCGTATTCCCATTGTGCTCATGTTGCGTCCATTGGCTTCAGGATAATTTTGTTCTTCACTACGAGATGGTAGAAAAGAGACCAGCTCTACCACAACATTAATTTTTGTTTTTAATAAAAAATGTAAAGGTAATTCGTGGATTCTTCACATGTAAGCCTTAGTTCTATTTGTAGAATTAATAGTTTGTAATTGATCATGTAGGCCCTTGTATAATTGTAATAAGCCGATTTATTGGGTTTCTTCTCTGCTGTTTTACAAGATACACTAGCTTAGCTTGAACATCGTTTATCTTATGAAGAGCTATCACATAATTTCTATATTGATTTTAAAAATGAGTTCAGCATAGCATTTCTAGAACTGATGCTCCTTAATTCCAATGAAGTAGGACCCTGCTGTTGCTCGTTTGAACAACATCCTGCTAATCAATGTAAGTCCATTCTTCTACCTTGTTTTGAAACTGTTTTTTATTTTTATTCTTTTTGTTTTTTAGAACTGTTTTTAAAATCTATATATTTGATGACTTGTAAATGTAGATTTTTATGTTTCTATGTGAATAGAATAACTTTTTTTGATCTGAAAAAGAGTTTTTTTTTTTCTTTATTTTTACA

mRNA sequence

AAAATCCTCCAATCACAAAGCGAAGGGAAAGGGCGAAGACTGCGTTTCGCTGCATCGCGGTCGCAGACCGACGTTCTTTTCTTCATCCTATAAATACTGTATCACTTCCCGAATTTTGTTCCTTTCTCTCTCTTCATTCTCCCTTACATCTCTCATCTGAATTAGGGCACACAAACACGATCTTTGTTTCTGAACCAGACATCTCTCCGATCTGCTATTCAGGGTGTCATTTGATTAGCGATAAAGCTTTACAAATAGCTTCTCTATCTATTGGCTTCTCAAGACTGGAACGGCTGTTTCTATGAAGGAATGAAATTTTCATAATTTATATTACTATCACCTCATGCCATGTCGGGTTTACTTAATTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGAGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCGCAAATAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTCTGTCTACTTCTGCTGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTACTGGCGGGGGTTTGTCATTACCTGGTCTTGCTTCTCGTCTAAACCTTGGTGCGAATAGTGGATCTGGAAGCTTAACTGTGCAGGGACAAAACCGTTTAATGAGTGGTGTGCTTCCACAAGGTTCCCTGAGAAAGCAGGGCCTTAGTCCTATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAGTGAAGACTTCCCAGCATTATCTAGATTTAAAGGTGGCAATGTTGATTATGGCATGGACATTCATCAGAAAGATCAACATGAAAATTCTGTGCCTATCATGCAGTCTCAGCAGTTCTCTATTGGGAGATCTGCTGGATTTAACCTAGGGAGCACATACTCACATCGACCCCAGCAGCAGCAGCAACATTCTCCTGCAGTCAGCAACAGCACGGTGTCCTTTCCGCCTGCTAATAATCAGGATCTCCTCCATTTACATGGTTCAGATATATTTCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAACTCAGTGTCTGGAATGGGTTATGACCAACTTATTCAGCAATATCAGCAGCATCACAGTCAACCGCAGTTCCGGTTGCAACATATGTCTGGTGTTAGCCAATCATTTAGAGATCAAGGGATGAAGTCTATGCAGGCAGCTCAATCTTCTCCTGACCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCGCTCGGGATTGATTTGACCACGTTAGGATTAAATTTGAATTCAGCAGATAACCTTCACAAGACTTTTGGTTCCCCGTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTTCTCTACATCAAGGATACTTCTCAAAATTCACTTTGGAAACGCTGTTTTATATATTTTTCAGCATGCCCAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTCTCGTACGAGAGAGGATCTTATCTCTGTTTTGACCCTCACACATTTGAAACTGTCCGCAAGTCATCTCTTAATGGATCGGCTTCAAATATCCCAGATGGTGCTGGGCGATCTTTTGCTACCTCATTTTCTAGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCTGGAACCATTCAAGGGTTGCATAACATTCATGGAAGCTTCAATATTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGTACACTTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTCTCTCAGTTGTCTCACAGCAGCTCTCACGGGCACTCAGGAGTTGCAAATAGAGGAGGTATGAGTGTTGTAGGAAATCCTGGATTTAGTAGCAGCACAAATGCAGTTGGTGGTTCTATTCCTGGGATTCTGTCCAGTTCTGCCGGTATTGGTAATCGAAATACTGTTCCAGGGTTGGGTGGATCTCCAATTTTGGGAAATGTAGGTCCTCGGATCACTAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTGCATGGTTCTGATATGTTCCCATCCTCACATGCTGCATCCTATCACCAGCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCACCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATCTATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGCGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGTTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAAAACTTACGAGAGAGGATCGTACCTCTGTTTCGATCCCCAAACATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCACTACGAGATGGTAGAAAAGAGACCAGCTCTACCACAACATTAATTTTTGTTTTTAATAAAAAATGTAAAGGTAATTCGTGGATTCTTCACATGTAAGCCTTAGTTCTATTTGTAGAATTAATAGTTTGTAATTGATCATGTAGGCCCTTGTATAATTGTAATAAGCCGATTTATTGGGTTTCTTCTCTGCTGTTTTACAAGATACACTAGCTTAGCTTGAACATCGTTTATCTTATGAAGAGCTATCACATAATTTCTATATTGATTTTAAAAATGAGTTCAGCATAGCATTTCTAGAACTGATGCTCCTTAATTCCAATGAAGTAGGACCCTGCTGTTGCTCGTTTGAACAACATCCTGCTAATCAATGTAAGTCCATTCTTCTACCTTGTTTTGAAACTGTTTTTTATTTTTATTCTTTTTGTTTTTTAGAACTGTTTTTAAAATCTATATATTTGATGACTTGTAAATGTAGATTTTTATGTTTCTATGTGAATAGAATAACTTTTTTTGATCTGAAAAAGAGTTTTTTTTTTTCTTTATTTTTACA

Coding sequence (CDS)

ATGTCGGGTTTACTTAATTCATCTGTTAATGGATCAGCTTCAAATCTTCCAGATGGTACTGGGCGATCTTTTGCTAACTCATTTTCTGGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCCGGAACTATCCAAGGGTTGCACAACATTCACGGAAACTTCAATCTTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGAGTGCAGCAACCTACTGGAACAATTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTTTCTCAGTTATCTCATGGCAGCTCTCACGGACATTCAGGAGTCGCAAATAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAGTAGCACAAATGCAGTTGGCGGTTCTATTCCTGGGATTCTGTCTACTTCTGCTGCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGTGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATCACAAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGGAGTATAACTACTGGCGGGGGTTTGTCATTACCTGGTCTTGCTTCTCGTCTAAACCTTGGTGCGAATAGTGGATCTGGAAGCTTAACTGTGCAGGGACAAAACCGTTTAATGAGTGGTGTGCTTCCACAAGGTTCCCTGAGAAAGCAGGGCCTTAGTCCTATTGTTCAACAAAACCAAGAGTTTAGCATTCAGAGTGAAGACTTCCCAGCATTATCTAGATTTAAAGGTGGCAATGTTGATTATGGCATGGACATTCATCAGAAAGATCAACATGAAAATTCTGTGCCTATCATGCAGTCTCAGCAGTTCTCTATTGGGAGATCTGCTGGATTTAACCTAGGGAGCACATACTCACATCGACCCCAGCAGCAGCAGCAACATTCTCCTGCAGTCAGCAACAGCACGGTGTCCTTTCCGCCTGCTAATAATCAGGATCTCCTCCATTTACATGGTTCAGATATATTTCCATCTTCACATGCTGCATCCTATCACCAGCAGTCTAGTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAACTCAGTGTCTGGAATGGGTTATGACCAACTTATTCAGCAATATCAGCAGCATCACAGTCAACCGCAGTTCCGGTTGCAACATATGTCTGGTGTTAGCCAATCATTTAGAGATCAAGGGATGAAGTCTATGCAGGCAGCTCAATCTTCTCCTGACCCATTCGGTTTACTTGGTTTGTTAAGTGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCGCTCGGGATTGATTTGACCACGTTAGGATTAAATTTGAATTCAGCAGATAACCTTCACAAGACTTTTGGTTCCCCGTGGTCTGATGAGCCTGCTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTTCTCTACATCAAGGATACTTCTCAAAATTCACTTTGGAAACGCTGTTTTATATATTTTTCAGCATGCCCAAAGATGAAGCTCAGTTGTATGCTGCAAATGAACTCTCGTACGAGAGAGGATCTTATCTCTGTTTTGACCCTCACACATTTGAAACTGTCCGCAAGTCATCTCTTAATGGATCGGCTTCAAATATCCCAGATGGTGCTGGGCGATCTTTTGCTACCTCATTTTCTAGTCAGTCTGGTGCAGCTTCCCCTGTTTTTCATCACTCTGGAACCATTCAAGGGTTGCATAACATTCATGGAAGCTTCAATATTCAGAACATGTCAGGTGCACTAACTTCAAGAAATTCAACAATAAATAATGTTCCATCTGGTGGGGTGCAGCAACCTACTGGTACACTTTCCAGTGGGCGTTTTGCATCAAACAACCTTCCTGTTGCTCTCTCTCAGTTGTCTCACAGCAGCTCTCACGGGCACTCAGGAGTTGCAAATAGAGGAGGTATGAGTGTTGTAGGAAATCCTGGATTTAGTAGCAGCACAAATGCAGTTGGTGGTTCTATTCCTGGGATTCTGTCCAGTTCTGCCGGTATTGGTAATCGAAATACTGTTCCAGGGTTGGGTGGATCTCCAATTTTGGGAAATGTAGGTCCTCGGATCACTAGTTCAATGGGAAATATGGTAAGTGGAGGCAACATAGGAAGAAGTATAACTACTGGCGGGGGATTGTCATTACCTGGTCTTGCTTCTCGTCTTAACCTTGGTGCAAATAATGGATCTGGAAGTTTATCTGTACAAGGACAAAACCGTTTGATGAGTGGTGCCCTTCCACAAGGTTCGCTGAGAAAACAAGGTCTTAGTCCTATTGCCCAACAAAACCATGAGTTCAGCATTCAGAATGAAGACTTTCCAGCGTTACCTAGATTTAAAGGTGGCAATGCTGATTATGGGATGGATATTCATCAGACAGACCAACATGAAAATTCTATGCCTATGATGCAGTCTCAGCAGTTCTCTATTGGAAGGTCTGCTGGATTTAACTTAGGGAGCACATATTCACATCGACCCCAGCAGCAGCAACAGCATTCTCCTGCAGTTAGTAACAGCACGGTCTCCTTTTCGCCTGCAAACAATCAGGATCTTCTTCATTTGCATGGTTCTGATATGTTCCCATCCTCACATGCTGCATCCTATCACCAGCAGTCTATTGGGCCTCCTGGTATTGGTTTAAGACCTCTGAGCTCTCCTAGTTCGGGTTCTGGAATGGGTTATGACCAACTTATCCAGCAATATCAGCAGCACCACGGTCAATCTCAGTTCCGATTGCAACCTTTGTCTGGTGTTAGCCAGTCATTTAGAGATCAGGGCTTGAAATCTATGCAGTCAGCTCAATCTTCTCCTGATCCATTCGGTTTACTTGGTTTGTTAAGCGTAATAAGGTTGAGTGATCCTGATCTTGCATCCCTTGCTCTCGGAATTGATTTGACCACGTTAGGATTAAATTTGAATTCATCAGATAACCTTCACAAGACTTTTGGCTCCCCTTGGTCTGATGAGCCTGTTAAGGGTGATCCAGATTTCAATGTACCTCAGTGTTATCTTATTAAACCACCACCTACGCTCCATCAAGGATACTTCTCAAAATTTACTCTTGAGACACTTTTTTATATATTTTTTAGCATGCCAAAAGATGAAGCTCAGTTGTATGCGTCAAATGAACTTTATAATAGAGGCTGGTTTTATCACAAAGAACAACGTTTCTGGTTCATTCGGGTCTCTAACATGGAACCACTTGTGAAGACGAAAACTTACGAGAGAGGATCGTACCTCTGTTTCGATCCCCAAACATTTGAAACCGTCCGCAAGGATAATTTTGTTCTTCACTACGAGATGGTAGAAAAGAGACCAGCTCTACCACAACATTAA

Protein sequence

MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGISVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSLRKQGLSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELSYERGSYLCFDPHTFETVRKSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFIRVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALPQH

Homology

[Close]

BLAST of Carg20263 vs. NCBI nr
Match: KAG7035435.1 (putative NOT transcription complex subunit VIP2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2203.3 bits (5708), Expect = 0.0e+00
Identity = 1131/1131 (100.00%), Postives = 1131/1131 (100.00%), Query Frame = 0


Query: 1    MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
            MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM
Sbjct: 1    MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60

Query: 61   SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
            SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI
Sbjct: 61   SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120

Query: 121  SVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVS 180
            SVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVS
Sbjct: 121  SVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVS 180

Query: 181  GGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSLRKQGLSPI 240
            GGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSLRKQGLSPI
Sbjct: 181  GGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSLRKQGLSPI 240

Query: 241  VQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLG 300
            VQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLG
Sbjct: 241  VQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAGFNLG 300

Query: 301  STYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIG 360
            STYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIG
Sbjct: 301  STYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGPPGIG 360

Query: 361  LRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDP 420
            LRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDP
Sbjct: 361  LRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQSSPDP 420

Query: 421  FGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNV 480
            FGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNV
Sbjct: 421  FGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDPDFNV 480

Query: 481  PQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELSYERGSYLCFDPHTF 540
            PQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELSYERGSYLCFDPHTF
Sbjct: 481  PQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELSYERGSYLCFDPHTF 540

Query: 541  ETVRKSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMS 600
            ETVRKSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMS
Sbjct: 541  ETVRKSSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMS 600

Query: 601  GALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMS 660
            GALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMS
Sbjct: 601  GALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMS 660

Query: 661  VVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSG 720
            VVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSG
Sbjct: 661  VVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSG 720

Query: 721  GNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSLRKQGLSPIA 780
            GNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSLRKQGLSPIA
Sbjct: 721  GNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSLRKQGLSPIA 780

Query: 781  QQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGS 840
            QQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGS
Sbjct: 781  QQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAGFNLGS 840

Query: 841  TYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGL 900
            TYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGL
Sbjct: 841  TYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPGIGL 900

Query: 901  RPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSPDPF 960
            RPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSPDPF
Sbjct: 901  RPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSPDPF 960

Query: 961  GLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDFNVP 1020
            GLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDFNVP
Sbjct: 961  GLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDFNVP 1020

Query: 1021 QCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFI 1080
            QCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFI
Sbjct: 1021 QCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRFWFI 1080

Query: 1081 RVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALPQH 1132
            RVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALPQH
Sbjct: 1081 RVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALPQH 1131

[Close]

BLAST of Carg20263 vs. NCBI nr
Match: XP_023532183.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1112.4 bits (2876), Expect = 0.0e+00
Identity = 582/656 (88.72%), Postives = 583/656 (88.87%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLGGSPILGNVGPR+TSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRLTSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQNHVQSVNSLNSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGSQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. NCBI nr
Match: XP_023532184.1 (probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1105.9 bits (2859), Expect = 0.0e+00
Identity = 581/656 (88.57%), Postives = 582/656 (88.72%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLGGSPILGNVGPR+TSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRLTSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQNHVQSVNSLNSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGSQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLH GYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLH-GYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. NCBI nr
Match: XP_022947130.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 580/656 (88.41%), Postives = 580/656 (88.41%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRG MSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGVMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLGGSPILGNVGPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLK MQSAQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. NCBI nr
Match: XP_023007444.1 (probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 570/656 (86.89%), Postives = 580/656 (88.41%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASN+PDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNLPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLG SPILGNVGPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGVSPILGNVGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQSHVQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGM+IHQTDQHE+SMP MQ+QQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMEIHQTDQHESSMPTMQAQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGS+Y+HRPQQQQQHSPAVSNS+VSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSSYAHRPQQQQQHSPAVSNSSVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQ+AQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQTAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. ExPASy Swiss-Prot
Match: Q52JK6 (Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthamiana OX=4100 GN=VIP2 PE=1 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.2e-214
Identity = 400/605 (66.12%), Postives = 455/605 (75.21%), Query Frame = 0


Query: 599  MSGALTSRNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGG 658
            M G LTSRN+ INNVPS GVQQ    LS GRF  NNLP ALSQ+   +SHGHSG+ +RGG
Sbjct: 1    MQGTLTSRNTAINNVPSSGVQQSGNNLSGGRFVPNNLPSALSQIPQGNSHGHSGMTSRGG 60

Query: 659  MSVVGNPGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMV 718
             SVVGNPG+SS+TN VGGSIPGIL + A IGNR++VPGLG SPILGN GPR+T+S+GN+V
Sbjct: 61   TSVVGNPGYSSNTNGVGGSIPGILPTFAAIGNRSSVPGLGVSPILGNAGPRMTNSVGNIV 120

Query: 719  SGGNIGRSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQ---------- 778
             GGNIGRSI++G GLS+PGLASRLN+ AN+GSG+L+VQG NRLMSG L Q          
Sbjct: 121  GGGNIGRSISSGAGLSVPGLASRLNMNANSGSGNLNVQGPNRLMSGVLQQASPQVLSMLG 180

Query: 779  -----------------------------------------------------------G 838
                                                                       G
Sbjct: 181  NSYPAGGPLSQNHVQAIGNFNSMGLLNDVNSNDGSPFDINDFPQLSSRPSSAGGPQGQLG 240

Query: 839  SLRKQGLSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQ-HENSMPMMQSQQF 898
            SLRKQGLSPI QQN EFSIQNEDFPALP FKGGNADY MD HQ +Q H+N++ MMQ Q F
Sbjct: 241  SLRKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDPHQKEQLHDNTLSMMQQQHF 300

Query: 899  SIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAAS 958
            S+GRSAGFNLG TY S+RPQQQ QH+P+VS+  VSFS  NNQDLL LHGSD+F SSH +S
Sbjct: 301  SMGRSAGFNLGGTYSSNRPQQQLQHAPSVSSGGVSFSNINNQDLLSLHGSDVFQSSH-SS 360

Query: 959  YHQQSIGPPGIGLRPLSSPSSGSGMG-YDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQG 1018
            Y QQ  GPPGIGLRPL+S  + SG+G YDQLIQQYQQH GQSQFRLQ +S + Q FRDQ 
Sbjct: 361  YQQQGGGPPGIGLRPLNSSGTVSGIGSYDQLIQQYQQHQGQSQFRLQQMSTLGQPFRDQS 420

Query: 1019 LKSMQSAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPW 1078
            LKSMQS Q +PDPFG+LGLLSVIR+SDPDL SLALGIDLTTLGLNLNS++NL+KTFGSPW
Sbjct: 421  LKSMQS-QVAPDPFGMLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSAENLYKTFGSPW 480

Query: 1079 SDEPVKGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYN 1132
            SDEP KGDP+F VPQCY  K PP L+Q YFSKF L+TLFYIF+SMPKDEAQLYA+NELYN
Sbjct: 481  SDEPAKGDPEFTVPQCYYAKQPPPLNQAYFSKFQLDTLFYIFYSMPKDEAQLYAANELYN 540

[Close]

BLAST of Carg20263 vs. ExPASy Swiss-Prot
Match: Q9FPW4 (Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 GN=VIP2 PE=1 SV=2)

HSP 1 Score: 666.0 bits (1717), Expect = 7.6e-190
Identity = 371/653 (56.81%), Postives = 450/653 (68.91%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASN+PDG+GRSF  S+S QSGA SP FHH+G +QGLHNIHG++N+ NM G LTS
Sbjct: 6    SSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTLTS 65

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSH SSHGHSG+ NR G++VVGNP
Sbjct: 66   RNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNR-GLNVVGNP 125

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSS+ N VGGSIPGILS+SAG+ NRN+VPG+G S +LGN GPRIT+SMGNMV GGN+GR
Sbjct: 126  GFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLGR 185

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQ----------------- 785
            +I++ GGLS+PGL+SRLNL AN+GSG L+VQGQNR+M G LPQ                 
Sbjct: 186  NISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGSQVMSMLGNSYHTGGG 245

Query: 786  ------------------------------------------------GSLRKQGLS-PI 845
                                                            GSLRKQGL  P+
Sbjct: 246  PLSQNHVQSVNNMMLSDHPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRKQGLGVPL 305

Query: 846  AQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQ-HENSMPMMQSQQFSIGRSAGFNL 905
             QQN EFSIQNEDFPALP +KGGN++Y MD+HQ +Q H+N+M MM SQ FS+GRS GFNL
Sbjct: 306  VQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSMGRSGGFNL 365

Query: 906  GSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPG 965
            G+TY SHRPQQQ QH+ +                                      G  G
Sbjct: 366  GATYSSHRPQQQPQHTSSTG------------------------------------GLQG 425

Query: 966  IGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSP 1025
            +GLRPLSSP++ S +GYDQLIQQYQQH  QSQF +Q +S ++Q FRD     M+S QS  
Sbjct: 426  LGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSINQ-FRD---SEMKSTQSEA 485

Query: 1026 DPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDF 1085
            DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS+ NL+KTF SPW++EP K + +F
Sbjct: 486  DPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNEPAKSEVEF 545

Query: 1086 NVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRF 1131
             VP CY    PP L +  F +F+ E LFY F+SMPKDEAQLYA++ELY RGWFYHKE R 
Sbjct: 546  TVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGWFYHKELRV 605

[Close]

BLAST of Carg20263 vs. ExPASy Swiss-Prot
Match: Q9NZN8 (CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-34
Identity = 83/177 (46.89%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 958  DPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVK-GD 1017
            D FG++GLL+ IR   +DP +  LALG DLTTLGLNLNS +NL+  F SPW+  P +  D
Sbjct: 353  DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQD 412

Query: 1018 PDFNVPQCYL--IKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYH 1077
             DF+VP  YL  I     L      ++  + LFY+++    D  QL A+ EL+NR W YH
Sbjct: 413  IDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYH 472

Query: 1078 KEQRFWFIRVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALP 1130
            KE+R W  R   MEP +KT TYERG+Y  FD   +  V K+ F L Y+ +E+RP LP
Sbjct: 473  KEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKE-FHLEYDKLEERPHLP 528

[Close]

BLAST of Carg20263 vs. ExPASy Swiss-Prot
Match: Q8C5L3 (CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-34
Identity = 83/177 (46.89%), Postives = 109/177 (61.58%), Query Frame = 0


Query: 958  DPFGLLGLLSVIRL--SDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVK-GD 1017
            D FG++GLL+ IR   +DP +  LALG DLTTLGLNLNS +NL+  F SPW+  P +  D
Sbjct: 353  DQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQD 412

Query: 1018 PDFNVPQCYL--IKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYH 1077
             DF+VP  YL  I     L      ++  + LFY+++    D  QL A+ EL+NR W YH
Sbjct: 413  IDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYH 472

Query: 1078 KEQRFWFIRVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKRPALP 1130
            KE+R W  R   MEP +KT TYERG+Y  FD   +  V K+ F L Y+ +E+RP LP
Sbjct: 473  KEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKE-FHLEYDKLEERPHLP 528

[Close]

BLAST of Carg20263 vs. ExPASy Swiss-Prot
Match: P87240 (General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=not2 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-26
Identity = 73/186 (39.25%), Postives = 106/186 (56.99%), Query Frame = 0


Query: 953  AQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLN--SSDNLHKT-FGSPWSDE 1012
            A  +   + L  LL +IR+ D ++++L LG DL  LG +L     D L  T   SPW++ 
Sbjct: 123  ADENAKQYMLESLLPIIRMEDSEMSTLQLGCDLAALGFDLAPVEEDRLISTNLFSPWAEL 182

Query: 1013 PVK---GDPDFNVPQCYL-IKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELY 1072
              K     P F +P CY  + PPP + + +  +F+ ETLFYIF++MP+D  Q  A+ EL 
Sbjct: 183  NTKKPVSQPMFKLPACYKNVNPPPAISKIF--QFSDETLFYIFYTMPRDVMQEAAAQELT 242

Query: 1073 NRGWFYHKEQRFWFIRVSNMEPLVKTKTYERGSYLCFDPQTFETVRKDNFVLHYEMVEKR 1132
            NR W +HKE R W   V  M+PL +T  +ERG Y+ FDP  ++ ++KD F+L Y  +E R
Sbjct: 243  NRNWRFHKELRVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKD-FLLMYAALEDR 302

[Close]

BLAST of Carg20263 vs. ExPASy TrEMBL
Match: A0A6J1G5Z5 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451093 PE=3 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 580/656 (88.41%), Postives = 580/656 (88.41%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRG MSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGVMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLGGSPILGNVGPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQSHMQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLK MQSAQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKYMQSAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. ExPASy TrEMBL
Match: A0A6J1L4Y9 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499942 PE=3 SV=1)

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 570/656 (86.89%), Postives = 580/656 (88.41%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASN+PDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS
Sbjct: 7    SSLNGSASNLPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILSSSAGIGNRN VPGLG SPILGNVGPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSSSAGIGNRNAVPGLGVSPILGNVGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSQQVISMLGNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQSHVQSVNSLSSLGMLNDVISNDNSPFDINDFPQLSSRPSSAGGAQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGM+IHQTDQHE+SMP MQ+QQFSIGRSAG
Sbjct: 307  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMEIHQTDQHESSMPTMQAQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGS+Y+HRPQQQQQHSPAVSNS+VSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP
Sbjct: 367  FNLGSSYAHRPQQQQQHSPAVSNSSVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQ+AQS
Sbjct: 427  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQTAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ
Sbjct: 547  DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 606

[Close]

BLAST of Carg20263 vs. ExPASy TrEMBL
Match: A0A6J1FYL0 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448793 PE=3 SV=1)

HSP 1 Score: 1046.6 bits (2705), Expect = 7.6e-302
Identity = 545/657 (82.95%), Postives = 568/657 (86.45%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASN+PDGAGRSFATSFS QSGAASPVFHHSGT+QGLHNIHGSFNIQNMSGAL S
Sbjct: 7    SSLNGSASNVPDGAGRSFATSFSGQSGAASPVFHHSGTMQGLHNIHGSFNIQNMSGALAS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRF-ASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGN 665
            RNSTINNVPSGGVQQPTGTLSSGR+ ASNNLPVALSQLSH  SHGH GVANRGG+SVVGN
Sbjct: 67   RNSTINNVPSGGVQQPTGTLSSGRYAASNNLPVALSQLSHGGSHGHLGVANRGGISVVGN 126

Query: 666  PGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIG 725
            PGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLG SPILGN GPRIT+SMGNMVSGGNIG
Sbjct: 127  PGFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGVSPILGNSGPRITTSMGNMVSGGNIG 186

Query: 726  RSITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG--------------- 785
            RSIT+GGGLSLPGLASRLNLGAN+GSGSLSVQGQNRLMSG LPQG               
Sbjct: 187  RSITSGGGLSLPGLASRLNLGANSGSGSLSVQGQNRLMSGVLPQGSQQVISMLGNSYPSA 246

Query: 786  -------------------------------------------------------SLRKQ 845
                                                                   SLRKQ
Sbjct: 247  GGPLSQNHMQSVNSLSSLGMLNDVNANDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRKQ 306

Query: 846  GLSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSA 905
            GLSPI QQN EFSIQNEDFPALPRFKGGNADYGMD+HQT+QHENS+PMMQSQQFSIGRSA
Sbjct: 307  GLSPIVQQNQEFSIQNEDFPALPRFKGGNADYGMDMHQTEQHENSVPMMQSQQFSIGRSA 366

Query: 906  GFNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIG 965
            GF+LGSTY+HRPQQQQQHS AVSNSTVSFSPANNQDLLHLHGSD+FPSSH ASYHQQS G
Sbjct: 367  GFSLGSTYTHRPQQQQQHSSAVSNSTVSFSPANNQDLLHLHGSDIFPSSHTASYHQQSSG 426

Query: 966  PPGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQ 1025
            PPGIGLRP+SSP+S SGMGYDQLIQQYQQHHGQSQFR Q +SGV+QSFRDQG+KSMQ+AQ
Sbjct: 427  PPGIGLRPMSSPNSASGMGYDQLIQQYQQHHGQSQFRFQSMSGVNQSFRDQGIKSMQTAQ 486

Query: 1026 SSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGD 1085
            SSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNS++NLHKTFGSPWSDEP KGD
Sbjct: 487  SSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSAENLHKTFGSPWSDEPAKGD 546

Query: 1086 PDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKE 1132
            PDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE
Sbjct: 547  PDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKE 606

[Close]

BLAST of Carg20263 vs. ExPASy TrEMBL
Match: A0A6J1G5I6 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451091 PE=3 SV=1)

HSP 1 Score: 1039.3 bits (2686), Expect = 1.2e-299
Identity = 540/656 (82.32%), Postives = 561/656 (85.52%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SS+NGSASN+PDG GRSFA SFS QSGAASPVFHHSGTIQGLHNIHG+FN+QNMSGALTS
Sbjct: 7    SSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTGT+SSGRFASNNLPVALSQLSH SSHGHSGV NRGG+SVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGISVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILS+SA IGNRN VPGLG SPILGN GPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGAN+GSGSL+VQGQNRLMSG LPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQNHIQNVNSLNSLGMLNDVNSSDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPI QQN EFSIQ+EDFPAL RFKGGN DYGMDIHQ DQHENS+P+MQSQQFSIGRSAG
Sbjct: 307  LSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSF PANNQDLLHLHGSD+FPSSHAASYHQQS GP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSP+S SGMGYDQLIQQYQQHH Q QFRLQ +SGVSQSFRDQG+KSMQ+AQS
Sbjct: 427  PGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNS+DNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPP+LHQGYFSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE 
Sbjct: 547  DFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEH 606

[Close]

BLAST of Carg20263 vs. ExPASy TrEMBL
Match: A0A6J1L4Y4 (probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499941 PE=3 SV=1)

HSP 1 Score: 1037.7 bits (2682), Expect = 3.5e-299
Identity = 539/656 (82.16%), Postives = 562/656 (85.67%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SS+NGSASN+PDG+GRSFA SFS QSGAASPVFHHSG+IQGLHNIHG+FN+QNMSGALTS
Sbjct: 7    SSVNGSASNLPDGSGRSFANSFSGQSGAASPVFHHSGSIQGLHNIHGNFNLQNMSGALTS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNSTINNVPSGGVQQPTG +SSGRFASNNLPVALSQLSH SSHGHSGVANRGG+SVVGNP
Sbjct: 67   RNSTINNVPSGGVQQPTGAISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGISVVGNP 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSSSTNAVGGSIPGILS+SA IGNRN VPGLG SPILGN GPRITSSMGNMVSGGNIGR
Sbjct: 127  GFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVSGGNIGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQG---------------- 785
            SITTGGGLSLPGLASRLNLGAN+GSGSL+VQGQNRLMSG LPQG                
Sbjct: 187  SITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSQQVISMLSNSYPSAG 246

Query: 786  ------------------------------------------------------SLRKQG 845
                                                                  SLRKQG
Sbjct: 247  GPLSQNHIQNVNSLNSLGMLNDVNASDNSPFDINDFPQLTSRPSSAGGPQGQLSSLRKQG 306

Query: 846  LSPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQHENSMPMMQSQQFSIGRSAG 905
            LSPI QQN EFSIQ+EDFPAL RFKGGN DYGMDIHQ DQHENS+P+MQSQQFSIGRSAG
Sbjct: 307  LSPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQHENSVPIMQSQQFSIGRSAG 366

Query: 906  FNLGSTYSHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGP 965
            FNLGSTYSHRPQQQQQHSPAVSNSTVSF PANNQDLLHLHGSD+FPSSHAASYHQQS GP
Sbjct: 367  FNLGSTYSHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAASYHQQSSGP 426

Query: 966  PGIGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQS 1025
            PGIGLRPLSSP+S SGMGYDQLIQQYQQHH Q QFRLQ +SGVSQSFRDQG+KSMQ+AQS
Sbjct: 427  PGIGLRPLSSPNSVSGMGYDQLIQQYQQHHSQPQFRLQHMSGVSQSFRDQGMKSMQAAQS 486

Query: 1026 SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDP 1085
            SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNS+DNLHKTFGSPWSDEP KGDP
Sbjct: 487  SPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSPWSDEPAKGDP 546

Query: 1086 DFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQ 1132
            DFNVPQCYLIKPPP+LHQGYFSKFTLETLFYIFFSMPKDEAQLYA+NELYNRGWFYHKE 
Sbjct: 547  DFNVPQCYLIKPPPSLHQGYFSKFTLETLFYIFFSMPKDEAQLYAANELYNRGWFYHKEH 606

[Close]

BLAST of Carg20263 vs. TAIR 10
Match: AT1G07705.2 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 686.8 bits (1771), Expect = 2.9e-197
Identity = 382/659 (57.97%), Postives = 453/659 (68.74%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SS+NGS SN+ DG+GR+F +SFS QSGAASPVFHH+G+IQGLHNIHG+FN+ N++G+L S
Sbjct: 7    SSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNLAGSLGS 66

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNS++N VPS GVQQ  G++S+GRFAS+N+PVALSQ+SH SSHGHSG+ NRG        
Sbjct: 67   RNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRG-------- 126

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
                                          GLG SPILGNVG R+TSSMGNMV GG +GR
Sbjct: 127  ------------------------------GLGVSPILGNVGSRMTSSMGNMVGGGTMGR 186

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQGSLR------------- 785
            ++++GGGLS+P L SRLNL  N+GSG++   GQNR+M G LPQGS +             
Sbjct: 187  TLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVLSMLGNSYPSAG 246

Query: 786  --------------------------------------------------------KQGL 845
                                                                    KQGL
Sbjct: 247  GLSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQGQLGSRLKQGL 306

Query: 846  --SPIAQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQ-HENSMPMMQSQQFSIGRS 905
              SPI QQN EFSIQNEDFPALP +KG +ADY MD+H  +Q HENS+ MMQSQQ S+GRS
Sbjct: 307  GISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQLSMGRS 366

Query: 906  AGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQS 965
             GFNLG  Y SHRPQQQQQH+ AVS+S VS           LHGSD+F SSH   YH Q+
Sbjct: 367  GGFNLGGAYTSHRPQQQQQHAQAVSSSGVS-----------LHGSDIFSSSH-PPYHSQT 426

Query: 966  IGPPGIGLRPLSSPSSGSGMGYD-QLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQ 1025
             G PGIGLR ++S +S +GMGYD QLIQQYQ     +Q+RLQ +S  SQ FRD GLKSMQ
Sbjct: 427  GGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDVGLKSMQ 486

Query: 1026 SAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPV 1085
            S QS+PD FGLLGLLSVI++SDPDL SLALGIDLTTLGLNLNS++NLHKTFGSPWS+EP 
Sbjct: 487  STQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSPWSNEPS 546

Query: 1086 KGDPDFNVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFY 1131
            K DP+F+VPQCY  K PP LHQG F+K  +ETLFY+F+SMPKDEAQLYA+NELYNRGWFY
Sbjct: 547  KVDPEFSVPQCYYAKNPPPLHQGLFAKLLVETLFYVFYSMPKDEAQLYAANELYNRGWFY 606

[Close]

BLAST of Carg20263 vs. TAIR 10
Match: AT5G59710.1 (VIRE2 interacting protein 2 )

HSP 1 Score: 666.0 bits (1717), Expect = 5.4e-191
Identity = 371/653 (56.81%), Postives = 450/653 (68.91%), Query Frame = 0


Query: 546  SSLNGSASNIPDGAGRSFATSFSSQSGAASPVFHHSGTIQGLHNIHGSFNIQNMSGALTS 605
            SSLNGSASN+PDG+GRSF  S+S QSGA SP FHH+G +QGLHNIHG++N+ NM G LTS
Sbjct: 6    SSLNGSASNLPDGSGRSFTASYSGQSGAPSPSFHHTGNLQGLHNIHGNYNVGNMQGTLTS 65

Query: 606  RNSTINNVPSGGVQQPTGTLSSGRFASNNLPVALSQLSHSSSHGHSGVANRGGMSVVGNP 665
            RNS++N++PS GVQQP G+ SSGRFASNNLPV LSQLSH SSHGHSG+ NR G++VVGNP
Sbjct: 66   RNSSMNSIPSAGVQQPNGSFSSGRFASNNLPVNLSQLSHGSSHGHSGIPNR-GLNVVGNP 125

Query: 666  GFSSSTNAVGGSIPGILSSSAGIGNRNTVPGLGGSPILGNVGPRITSSMGNMVSGGNIGR 725
            GFSS+ N VGGSIPGILS+SAG+ NRN+VPG+G S +LGN GPRIT+SMGNMV GGN+GR
Sbjct: 126  GFSSNANGVGGSIPGILSTSAGLSNRNSVPGMGISQLLGNSGPRITNSMGNMVGGGNLGR 185

Query: 726  SITTGGGLSLPGLASRLNLGANNGSGSLSVQGQNRLMSGALPQ----------------- 785
            +I++ GGLS+PGL+SRLNL AN+GSG L+VQGQNR+M G LPQ                 
Sbjct: 186  NISS-GGLSIPGLSSRLNLAANSGSG-LNVQGQNRMMGGVLPQGSQVMSMLGNSYHTGGG 245

Query: 786  ------------------------------------------------GSLRKQGLS-PI 845
                                                            GSLRKQGL  P+
Sbjct: 246  PLSQNHVQSVNNMMLSDHPNDSSLFDINNDFPQLTSRPGSAGGTQGHLGSLRKQGLGVPL 305

Query: 846  AQQNHEFSIQNEDFPALPRFKGGNADYGMDIHQTDQ-HENSMPMMQSQQFSIGRSAGFNL 905
             QQN EFSIQNEDFPALP +KGGN++Y MD+HQ +Q H+N+M MM SQ FS+GRS GFNL
Sbjct: 306  VQQNQEFSIQNEDFPALPGYKGGNSEYPMDLHQKEQLHDNAMSMMHSQNFSMGRSGGFNL 365

Query: 906  GSTY-SHRPQQQQQHSPAVSNSTVSFSPANNQDLLHLHGSDMFPSSHAASYHQQSIGPPG 965
            G+TY SHRPQQQ QH+ +                                      G  G
Sbjct: 366  GATYSSHRPQQQPQHTSSTG------------------------------------GLQG 425

Query: 966  IGLRPLSSPSSGSGMGYDQLIQQYQQHHGQSQFRLQPLSGVSQSFRDQGLKSMQSAQSSP 1025
            +GLRPLSSP++ S +GYDQLIQQYQQH  QSQF +Q +S ++Q FRD     M+S QS  
Sbjct: 426  LGLRPLSSPNAVSSIGYDQLIQQYQQHQNQSQFPVQQMSSINQ-FRD---SEMKSTQSEA 485

Query: 1026 DPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSSDNLHKTFGSPWSDEPVKGDPDF 1085
            DPF LLGLL V+  S+P+L SLALGIDLTTLGL+LNS+ NL+KTF SPW++EP K + +F
Sbjct: 486  DPFCLLGLLDVLNRSNPELTSLALGIDLTTLGLDLNSTGNLYKTFASPWTNEPAKSEVEF 545

Query: 1086 NVPQCYLIKPPPTLHQGYFSKFTLETLFYIFFSMPKDEAQLYASNELYNRGWFYHKEQRF 1131
             VP CY    PP L +  F +F+ E LFY F+SMPKDEAQLYA++ELY RGWFYHKE R 
Sbjct: 546  TVPNCYYATEPPPLTRASFKRFSYELLFYTFYSMPKDEAQLYAADELYERGWFYHKELRV 605

[Close]

BLAST of Carg20263 vs. TAIR 10
Match: AT1G07705.1 (NOT2 / NOT3 / NOT5 family )

HSP 1 Score: 610.1 bits (1572), Expect = 3.5e-174
Identity = 349/599 (58.26%), Postives = 408/599 (68.11%), Query Frame = 0


Query: 1   MSGLLNSSVNGSASNLPDGTGRSFANSFSGQSGAASPVFHHSGTIQGLHNIHGNFNLQNM 60
           MS LLNSS+NGS SNL DG+GR+F +SFSGQSGAASPVFHH+G+IQGLHNIHGNFN+ N+
Sbjct: 1   MSSLLNSSINGSTSNLSDGSGRTFTSSFSGQSGAASPVFHHAGSIQGLHNIHGNFNVPNL 60

Query: 61  SGALTSRNSTINNVPSGGVQQPTGTISSGRFASNNLPVALSQLSHGSSHGHSGVANRGGI 120
           +G+L SRNS++N VPS GVQQ  G+IS+GRFAS+N+PVALSQ+SHGSSHGHSG+ NRG  
Sbjct: 61  AGSLGSRNSSLNGVPSAGVQQQNGSISNGRFASSNIPVALSQMSHGSSHGHSGLTNRG-- 120

Query: 121 SVVGNPGFSSSTNAVGGSIPGILSTSAAIGNRNAVPGLGVSPILGNAGPRITSSMGNMVS 180
                                               GLGVSPILGN G R+TSSMGNMV 
Sbjct: 121 ------------------------------------GLGVSPILGNVGSRMTSSMGNMVG 180

Query: 181 GGNIGRSITTGGGLSLPGLASRLNLGANSGSGSLTVQGQNRLMSGVLPQGSLR------- 240
           GG +GR++++GGGLS+P L SRLNL  NSGSG++   GQNR+M GVLPQGS +       
Sbjct: 181 GGTMGRTLSSGGGLSIPSLGSRLNLAVNSGSGNI---GQNRMMGGVLPQGSPQVLSMLGN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 SYPSAGGLSQNHVQAMNSLSSMGLLNDMNSNDTSPFDINNDFPQLTSRPSSAGSQGQLGS 300

Query: 301 --KQGL--SPIVQQNQEFSIQSEDFPALSRFKGGNVDYGMDIHQKDQ-HENSVPIMQSQQ 360
             KQGL  SPIVQQNQEFSIQ+EDFPAL  +KG + DY MD+H K+Q HENSV +MQSQQ
Sbjct: 301 RLKQGLGISPIVQQNQEFSIQNEDFPALPGYKGSSADYPMDLHHKEQLHENSVLMMQSQQ 360

Query: 361 FSIGRSAGFNLGSTY-SHRPQQQQQHSPAVSNSTVSFPPANNQDLLHLHGSDIFPSSHAA 420
            S+GRS GFNLG  Y SHRPQQQQQH+ AVS+S VS           LHGSDIF SSH  
Sbjct: 361 LSMGRSGGFNLGGAYTSHRPQQQQQHAQAVSSSGVS-----------LHGSDIFSSSH-P 420

Query: 421 SYHQQSSGPPGIGLRPLSSPNSVSGMGYD-QLIQQYQQHHSQPQFRLQHMSGVSQSFRDQ 480
            YH Q+ G PGIGLR ++S NS++GMGYD QLIQQYQ   +  Q+RLQ MS  SQ FRD 
Sbjct: 421 PYHSQTGGAPGIGLRSMNSANSITGMGYDQQLIQQYQHQQNSAQYRLQQMSAASQPFRDV 480

Query: 481 GMKSMQAAQSSPDPFGLLGLLSVIRLSDPDLASLALGIDLTTLGLNLNSADNLHKTFGSP 526
           G+KSMQ+ QS+PD FGLLGLLSVI++SDPDL SLALGIDLTTLGLNLNS +NLHKTFGSP
Sbjct: 481 GLKSMQSTQSNPDRFGLLGLLSVIKMSDPDLTSLALGIDLTTLGLNLNSTENLHKTFGSP 540

The following BLAST results are available for this feature:

BLAST of Carg20263 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035435.1	0.0e+00	100.00	putative NOT transcription complex subunit VIP2 [Cucurbita argyrosperma subsp. a...	[more]
XP_023532183.1	0.0e+00	88.72	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita pepo subsp...	[more]
XP_023532184.1	0.0e+00	88.57	probable NOT transcription complex subunit VIP2 isoform X2 [Cucurbita pepo subsp...	[more]
XP_022947130.1	0.0e+00	88.41	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita moschata]	[more]
XP_023007444.1	0.0e+00	86.89	probable NOT transcription complex subunit VIP2 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg20263 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q52JK6	1.2e-214	66.12	Probable NOT transcription complex subunit VIP2 (Fragment) OS=Nicotiana benthami...	[more]
Q9FPW4	7.6e-190	56.81	Probable NOT transcription complex subunit VIP2 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9NZN8	3.1e-34	46.89	CCR4-NOT transcription complex subunit 2 OS=Homo sapiens OX=9606 GN=CNOT2 PE=1 S...	[more]
Q8C5L3	3.1e-34	46.89	CCR4-NOT transcription complex subunit 2 OS=Mus musculus OX=10090 GN=Cnot2 PE=1 ...	[more]
P87240	1.1e-26	39.25	General negative regulator of transcription subunit 2 OS=Schizosaccharomyces pom...	[more]

BLAST of Carg20263 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5Z5	0.0e+00	88.41	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1L4Y9	0.0e+00	86.89	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1FYL0	7.6e-302	82.95	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1G5I6	1.2e-299	82.32	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1L4Y4	3.5e-299	82.16	probable NOT transcription complex subunit VIP2 isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of Carg20263 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07705.2	2.9e-197	57.97	NOT2 / NOT3 / NOT5 family	[more]
AT5G59710.1	5.4e-191	56.81	VIRE2 interacting protein 2	[more]
AT1G07705.1	3.5e-174	58.26	NOT2 / NOT3 / NOT5 family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038635	CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamily	GENE3D	2.30.30.1020		coord: 411..526 e-value: 1.6E-35 score: 124.2 coord: 951..1131 e-value: 1.6E-64 score: 218.9
IPR007282	NOT2/NOT3/NOT5, C-terminal	PFAM	PF04153	NOT2_3_5	coord: 1000..1121 e-value: 1.8E-31 score: 109.0 coord: 461..526 e-value: 7.9E-10 score: 38.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 834..913
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 344..373
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 834..871
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 230..525
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 769..1131 coord: 2..227
None	No IPR available	PANTHER	PTHR23326:SF15	NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED	coord: 546..766
IPR040168	Not2/Not3/Not5	PANTHER	PTHR23326	CCR4 NOT-RELATED	coord: 769..1131 coord: 546..766 coord: 230..525
IPR040168	Not2/Not3/Not5	PANTHER	PTHR23326	CCR4 NOT-RELATED	coord: 2..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20263-RA	Carg20263-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0030015	CCR4-NOT core complex