Carg20206 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20206
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	VARLMGL domain-containing protein
Location	Carg_Chr11: 370433 .. 371236 (-)
RNA-Seq Expression	Carg20206
Synteny	Carg20206

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

mRNA sequence

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Coding sequence (CDS)

ATGAAGGAGTTATCCTTCTTTCTCTTCAAGAACTCTCTGGCTGCAAAGATGAGAAAAGGCTTTAGAACTTTCTGCAATGGCGACGGCTCCACCTCCACGCTCAACCAACACAAAACCAACCAGGCTCCCTTCCCTGCCTCGCCGCCCGACATGCCCTGCACACAAAACCAACCAACCTTGGAGGAGATGATTCTTCAGCTGGAGCTGGAGGAGGAGACGGCAAGAAGGACTACACTCTGCAACTACAATGAGATGCGAGGCAGGATGTCGTGCGTAAACAACTCGGATATCTTACGCTCTGCACGGAATGCCTTGAATCAGTACCCTCGGTTTTCCCTCGATGGAAAGGATGCAATGTATCGATCTTCATTTAGGGATGCTGCTGAAAAGGGTGGGAGGAAATCAGTTTGCTGTGAGTATGCTCTCAGAGGGAGAATTCATGAGAACGAGTTCAATTTGACGTTAGAAACAGCCTTGCGGTTGCCATCGACGATAGCTGGAGAGAGTGTCGTGTGGCGCAAACCAGGAGTTGTAGCCAAGTTGATGGGTCTCGAGGCAATGCCGACGCCGGTGAATGCTGAATATGGCGCAGCGAAGTTGAGCTCTATTTTGAAGAAACAGAGTCTAAGGAAGAGAGCTGGTTATAAGAGGCATGAAAAGGAGAGGAGATTTTGCATGGACTATTCGGGTTCTGATGGCACTATAACTGGCAGGCTAAGCTCTTGCAGTTCAAACAATGGGCGCTATATTGTGAAGCCAATTGCGACAGAATCAGCAGCATGGAAAGCCAGGCATTTTCTATAG

Protein sequence

MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTLEEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMYRSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLSSCSSNNGRYIVKPIATESAAWKARHFL

Homology

[Close]

BLAST of Carg20206 vs. NCBI nr
Match: KAG7021432.1 (hypothetical protein SDJN02_15157, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 267

[Close]

BLAST of Carg20206 vs. NCBI nr
Match: KAG6587449.1 (hypothetical protein SDJN03_16014, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 524.2 bits (1349), Expect = 6.4e-145
Identity = 264/267 (98.88%), Postives = 266/267 (99.63%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPAS PDMPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPAS-PDMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRTTLCNY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTTLCNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRY+VKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYVVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. NCBI nr
Match: XP_023530765.1 (uncharacterized protein LOC111793216 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.0 bits (1338), Expect = 1.2e-143
Identity = 263/267 (98.50%), Postives = 264/267 (98.88%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS PDMPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PDMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRT LCNY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. NCBI nr
Match: XP_022931914.1 (uncharacterized protein LOC111438186 [Cucurbita moschata])

HSP 1 Score: 514.6 bits (1324), Expect = 5.1e-142
Identity = 261/267 (97.75%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS PDM CTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PDMSCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMI+QLELEEETARRT LCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMIIQLELEEETARRTKLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. NCBI nr
Match: XP_023007284.1 (uncharacterized protein LOC111499822 [Cucurbita maxima])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS P+MPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PNMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRT LCNY+EMRGRMSCVNNSDILRSA+NALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSAQNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. ExPASy TrEMBL
Match: A0A6J1EVK1 (uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC111438186 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.5e-142
Identity = 261/267 (97.75%), Postives = 262/267 (98.13%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS PDM CTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PDMSCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMI+QLELEEETARRT LCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMIIQLELEEETARRTKLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. ExPASy TrEMBL
Match: A0A6J1L4I6 (uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.1e-142
Identity = 260/267 (97.38%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ PFPAS P+MPCTQNQPTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDPFPAS-PNMPCTQNQPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARRT LCNY+EMRGRMSCVNNSDILRSA+NALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRTKLCNYDEMRGRMSCVNNSDILRSAQNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEAMPTPVNAE GAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS
Sbjct: 181 LMGLEAMPTPVNAECGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNGRYIVKPIATESAAWKARHFL
Sbjct: 241 SCSSNNGRYIVKPIATESAAWKARHFL 266

[Close]

BLAST of Carg20206 vs. ExPASy TrEMBL
Match: A0A6J1C1L3 (uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007440 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.5e-119
Identity = 229/267 (85.77%), Postives = 241/267 (90.26%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKG RTFCNGDGSTSTLNQHK NQ  FP S PD+ C +N PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGIRTFCNGDGSTSTLNQHKANQDHFPIS-PDVRCRKNPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFRDAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180
           RSSFR+  +  GRKSVCCEYAL+GRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK
Sbjct: 121 RSSFRN-LDAAGRKSVCCEYALKGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVVAK 180

Query: 181 LMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGRLS 240
           LMGLEA+P PVNA+ G AKLSSILK+ +LR+RA  KRHEKERRF MDY GSDGTITGRLS
Sbjct: 181 LMGLEAIPMPVNAKGGKAKLSSILKRHNLRRRA--KRHEKERRFGMDYPGSDGTITGRLS 240

Query: 241 SCSSNNGRYIVKPIATESAAWKARHFL 268
           SCSSNNG Y+VKPIATESAAWKAR FL
Sbjct: 241 SCSSNNGCYVVKPIATESAAWKARQFL 263

[Close]

BLAST of Carg20206 vs. ExPASy TrEMBL
Match: A0A5D3BIJ6 (VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001160 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.5e-118
Identity = 227/269 (84.39%), Postives = 240/269 (89.22%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQ  FP S PD+ C Q  PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQDQFPIS-PDLHCRQTPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180
           RSSFR  D AE+ GRKSVCCEY L+GR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVV
Sbjct: 121 RSSFRNLDVAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240
           AKLMGLEA+P P+NA    A L+SILK+QSLRKRA  KR EKERRF +DY GSDGTITGR
Sbjct: 181 AKLMGLEAIPMPLNARSSKATLNSILKRQSLRKRA--KRQEKERRFSVDYPGSDGTITGR 240

Query: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 268
           LSSCSSNNG YIVKPIATESAAW+AR FL
Sbjct: 241 LSSCSSNNGCYIVKPIATESAAWRAREFL 266

[Close]

BLAST of Carg20206 vs. ExPASy TrEMBL
Match: A0A0A0LNU8 (VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.5e-118
Identity = 228/269 (84.76%), Postives = 240/269 (89.22%), Query Frame = 0


Query: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQHKTNQAPFPASPPDMPCTQNQPTL 60
           MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQ KTNQ  FP S PD+ C Q  PTL
Sbjct: 1   MKELSFFLFKNSLAAKMRKGFRTFCNGDGSTSTLNQQKTNQDQFPIS-PDLHCRQTPPTL 60

Query: 61  EEMILQLELEEETARRTTLCNYNEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120
           EEMILQLELEEETARR  L NY+EMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY
Sbjct: 61  EEMILQLELEEETARRAKLYNYDEMRGRMSCVNNSDILRSARNALNQYPRFSLDGKDAMY 120

Query: 121 RSSFR--DAAEKGGRKSVCCEYALRGRIHENEFNLTLETALRLPSTIAGESVVWRKPGVV 180
           RSSFR  DAAE+ GRKSVCCEY L+GR+H+NEFNLTLETALRLPSTIAGE+VVWRKPGVV
Sbjct: 121 RSSFRNLDAAERVGRKSVCCEYGLKGRVHDNEFNLTLETALRLPSTIAGENVVWRKPGVV 180

Query: 181 AKLMGLEAMPTPVNAEYGAAKLSSILKKQSLRKRAGYKRHEKERRFCMDYSGSDGTITGR 240
           AKLMGLEAMP P+NA    A L+SILK+QSLRKRA  KR EKERRF +DY GSDGTITGR
Sbjct: 181 AKLMGLEAMPMPLNARSSKATLTSILKRQSLRKRA--KRQEKERRFSVDYPGSDGTITGR 240

Query: 241 LSSCSSNNGRYIVKPIATESAAWKARHFL 268
           LSSCSSNNG YIVKPIATESAAW+AR FL
Sbjct: 241 LSSCSSNNGCYIVKPIATESAAWRAREFL 266

The following BLAST results are available for this feature:

BLAST of Carg20206 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021432.1	1.1e-147	100.00	hypothetical protein SDJN02_15157, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6587449.1	6.4e-145	98.88	hypothetical protein SDJN03_16014, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023530765.1	1.2e-143	98.50	uncharacterized protein LOC111793216 [Cucurbita pepo subsp. pepo]	[more]
XP_022931914.1	5.1e-142	97.75	uncharacterized protein LOC111438186 [Cucurbita moschata]	[more]
XP_023007284.1	1.5e-141	97.38	uncharacterized protein LOC111499822 [Cucurbita maxima]	[more]

BLAST of Carg20206 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVK1	2.5e-142	97.75	uncharacterized protein LOC111438186 OS=Cucurbita moschata OX=3662 GN=LOC1114381...	[more]
A0A6J1L4I6	7.1e-142	97.38	uncharacterized protein LOC111499822 OS=Cucurbita maxima OX=3661 GN=LOC111499822...	[more]
A0A6J1C1L3	8.5e-119	85.77	uncharacterized protein LOC111007440 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5D3BIJ6	5.5e-118	84.39	VARLMGL domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0LNU8	5.5e-118	84.76	VARLMGL domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G004160 PE=...	[more]

BLAST of Carg20206 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032795	DUF3741-associated sequence motif	PFAM	PF14383	VARLMGL	coord: 168..189 e-value: 1.9E-7 score: 30.4
None	No IPR available	PANTHER	PTHR37897	DNAK FAMILY PROTEIN	coord: 1..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20206-RA	Carg20206-RA	mRNA