Carg20201 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20201
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Location	Carg_Chr11: 344895 .. 346094 (-)
RNA-Seq Expression	Carg20201
Synteny	Carg20201

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGGTTTGCAAAGAGAAGTCCTGTTCCCCACATTCTTCTTCGTCTTCATTCCGCTCTCCTTTTCTTCTTCTCCTGACTTCTCCTCGGTTACGTTTCCCTTTCCACCAACAGAGCTTGATTAATTCAATTCACTCACACTTCTATAGAAGCCATGAGGTCTAATGCCGCAGCCGGAACCATGAAGTTTCTCTGTAGCTATGGCGGCAAGATTCTTCCACGTCAAACCGACGGTAAACTTCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCATTCCGTTTCGTATTCTGGTTCGTAATCTGCTTTTTTTTTTTTTTTTTTTTTTTTTATTTTATTTATAATCTTTTGAAATTTGTTTCTCTTCTCTAGGTGTTTATGTATTTCGTTTTTTTTCTTAATTCCGTTTTGCAGAGTTAATGGTGAAGCTTGTAGAATTCTGTGGTTCTTCCGTTACGTTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAATGTTGATTACCGTTAGATCCGATGAGGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTTGCATCCTCTTAAAATCAGAGCCATTCTTGCGCCTCCAAAATCTCTCAAAAAAGTTTCTCCTCCGTCGAGCGTGTACTTCAATCTTCCTAATTCTCCCTGCTACAGCGCGGATTCGCTTCCGAGCTCGCCACAATACGCAATCAACGATCGGATCTCTTCTCCTTCGTACAGATACATCCGTCGGATCCCCTCGCCTCCAAGTAAATACTTCGTCGGACAGCGTAATTGCCATGGAAGAAATTGTTGCCATGGGAGCCCTAGGTCTTTGTACTCATGCGCTCACTGGCACTGATACAAAATCCCTAAACTCGAGGCGAAGACTCCATATAAAGCACAAACCCTAGGTAGATGATGACAAAAGAGAAAACAGAAGCGAAAACAGAACAAAATAGTTTTTAGTTTTGATTTGTGATTGGTTGATTATTGGAACATAGTTTTAAAAAGCTTTCGAATTCATTAATTGTTTGCTTGAAAAGAAAATTGATTAATCCATCAGAAGTTTTTCGAGAGGAGTTGGTATTCTCAAATCTCAATCCCCGTCGCGGTTCCGGTTACCCGGCGGGCGTTGAAAATTAATTGAAAAAATTTGTTAAAAGAAAGAAAGGCAGGAGGGTAAAGTGGGGTCATG

mRNA sequence

TTAGGTTTGCAAAGAGAAGTCCTGTTCCCCACATTCTTCTTCGTCTTCATTCCGCTCTCCTTTTCTTCTTCTCCTGACTTCTCCTCGGTTACGTTTCCCTTTCCACCAACAGAGCTTGATTAATTCAATTCACTCACACTTCTATAGAAGCCATGAGGTCTAATGCCGCAGCCGGAACCATGAAGTTTCTCTGTAGCTATGGCGGCAAGATTCTTCCACGTCAAACCGACGGTAAACTTCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCATTCCGTTTCGTATTCTGAGTTAATGGTGAAGCTTGTAGAATTCTGTGGTTCTTCCGTTACGTTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAATGTTGATTACCGTTAGATCCGATGAGGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTTGCATCCTCTTAAAATCAGAGCCATTCTTGCGCCTCCAAAATCTCTCAAAAAAGTTTCTCCTCCGTCGAGCGTGTACTTCAATCTTCCTAATTCTCCCTGCTACAGCGCGGATTCGCTTCCGAGCTCGCCACAATACGCAATCAACGATCGGATCTCTTCTCCTTCGTACAGATACATCCGTCGGATCCCCTCGCCTCCAAGTAAATACTTCGTCGGACAGCGTAATTGCCATGGAAGAAATTGTTGCCATGGGAGCCCTAGGTCTTTGTACTCATGCGCTCACTGGCACTGATACAAAATCCCTAAACTCGAGGCGAAGACTCCATATAAAGCACAAACCCTAGGTAGATGATGACAAAAGAGAAAACAGAAGCGAAAACAGAACAAAATAGTTTTTAGTTTTGATTTGTGATTGGTTGATTATTGGAACATAGTTTTAAAAAGCTTTCGAATTCATTAATTGTTTGCTTGAAAAGAAAATTGATTAATCCATCAGAAGTTTTTCGAGAGGAGTTGGTATTCTCAAATCTCAATCCCCGTCGCGGTTCCGGTTACCCGGCGGGCGTTGAAAATTAATTGAAAAAATTTGTTAAAAGAAAGAAAGGCAGGAGGGTAAAGTGGGGTCATG

Coding sequence (CDS)

ATGAGGTCTAATGCCGCAGCCGGAACCATGAAGTTTCTCTGTAGCTATGGCGGCAAGATTCTTCCACGTCAAACCGACGGTAAACTTCGTTACGTTGGTGGTCTTACCAGAGTTCTAGCCGTCGATCATTCCGTTTCGTATTCTGAGTTAATGGTGAAGCTTGTAGAATTCTGTGGTTCTTCCGTTACGTTGAAGTGCCAATTGCCAGGCGGAGACTTGGAAATGTTGATTACCGTTAGATCCGATGAGGATTTGGCCAATATCGTCGAGGAATACGATCGTGCTTCTTCGTCGTTGTTGCATCCTCTTAAAATCAGAGCCATTCTTGCGCCTCCAAAATCTCTCAAAAAAGTTTCTCCTCCGTCGAGCGTGTACTTCAATCTTCCTAATTCTCCCTGCTACAGCGCGGATTCGCTTCCGAGCTCGCCACAATACGCAATCAACGATCGGATCTCTTCTCCTTCGTACAGATACATCCGTCGGATCCCCTCGCCTCCAAGTAAATACTTCGTCGGACAGCGTAATTGCCATGGAAGAAATTGTTGCCATGGGAGCCCTAGGTCTTTGTACTCATGCGCTCACTGGCACTGA

Protein sequence

MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCHGSPRSLYSCAHWH

Homology

[Close]

BLAST of Carg20201 vs. NCBI nr
Match: XP_022933692.1 (uncharacterized protein LOC111441028 [Cucurbita moschata] >KAG7021427.1 hypothetical protein SDJN02_15152 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.5 bits (1033), Expect = 2.1e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS
Sbjct: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60

Query: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120
           SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP
Sbjct: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120

Query: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180
           PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN
Sbjct: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180

Query: 181 CCHGSPRSLYSCAHWH 197
           CCHGSPRSLYSCAHWH
Sbjct: 181 CCHGSPRSLYSCAHWH 196

[Close]

BLAST of Carg20201 vs. NCBI nr
Match: KAG6587445.1 (hypothetical protein SDJN03_16010, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 400.6 bits (1028), Expect = 7.8e-108
Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS
Sbjct: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60

Query: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120
           SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP
Sbjct: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120

Query: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180
           PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPS+RYIRRIPSPPSKYFVGQRNCHGRN
Sbjct: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSHRYIRRIPSPPSKYFVGQRNCHGRN 180

Query: 181 CCHGSPRSLYSCAHWH 197
           CCHGSPRSLYSCAHWH
Sbjct: 181 CCHGSPRSLYSCAHWH 196

[Close]

BLAST of Carg20201 vs. NCBI nr
Match: XP_023005797.1 (uncharacterized protein LOC111498688 [Cucurbita maxima])

HSP 1 Score: 395.2 bits (1014), Expect = 3.3e-106
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           MRSN AAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSV+YSELMVKLVEFCGS
Sbjct: 1   MRSNTAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVTYSELMVKLVEFCGS 60

Query: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120
           SVTLKCQLP GDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP
Sbjct: 61  SVTLKCQLPDGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120

Query: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180
           PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN
Sbjct: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180

Query: 181 CCHGSPRSLYSCAHWH 197
           CCHGSPRSLYSC HWH
Sbjct: 181 CCHGSPRSLYSCPHWH 196

[Close]

BLAST of Carg20201 vs. NCBI nr
Match: XP_038878416.1 (uncharacterized protein LOC120070656 [Benincasa hispida])

HSP 1 Score: 338.2 bits (866), Expect = 4.8e-89
Identity = 164/196 (83.67%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 4   NAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVT 63
           N  +GT+KFLCSYGGKILPRQTDGKLRYVGGLTRVLAV+ S+S+SELMVKL EFCGSSVT
Sbjct: 7   NGRSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSISFSELMVKLGEFCGSSVT 66

Query: 64  LKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSS 123
           LKCQLPGGDLE LI+V SDEDLANIVEEYDRASSSLLHPLKIRAIL+PPKSLKK+SPPSS
Sbjct: 67  LKCQLPGGDLETLISVTSDEDLANIVEEYDRASSSLLHPLKIRAILSPPKSLKKISPPSS 126

Query: 124 VYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCH 183
           V   LPNSPCY  DSLPSSPQY IN+RISSPSYR+IR+IPSPPSKYFVG RNCHGR CCH
Sbjct: 127 VDSTLPNSPCYGVDSLPSSPQYGINERISSPSYRFIRQIPSPPSKYFVGPRNCHGRTCCH 186

Query: 184 GSPRSLYS---CAHWH 197
           GSPR LY+   C HW+
Sbjct: 187 GSPRFLYTGPHCTHWN 202

[Close]

BLAST of Carg20201 vs. NCBI nr
Match: XP_008464503.1 (PREDICTED: uncharacterized protein LOC103502365 [Cucumis melo] >KAA0057813.1 Octicosapeptide/Phox/Bem1p family protein [Cucumis melo var. makuwa] >TYJ98497.1 Octicosapeptide/Phox/Bem1p family protein [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 8.1e-89
Identity = 165/196 (84.18%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 4   NAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVT 63
           N ++GT+KFLCSYGGKILPRQTDGKLRYVGGLTRVLAV+ SVS+SELMVKL EFCGSSVT
Sbjct: 7   NGSSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEFCGSSVT 66

Query: 64  LKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSS 123
           LKCQLPGGDLE LI+VRSDEDLANIVEEYDRASSSL HPLKIRAIL+PPKSLK++SPPSS
Sbjct: 67  LKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQISPPSS 126

Query: 124 VYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCH 183
           V   LPNSPCY ADSLPSSPQY  ++RISSPSYR+IRRIPSPPSKYFVG RNCHGR CCH
Sbjct: 127 VDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCHGRTCCH 186

Query: 184 GSPRSLYS---CAHWH 197
           GSPR LYS   C HW+
Sbjct: 187 GSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg20201 vs. ExPASy TrEMBL
Match: A0A6J1F0I8 (uncharacterized protein LOC111441028 OS=Cucurbita moschata OX=3662 GN=LOC111441028 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.0e-108
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS
Sbjct: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60

Query: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120
           SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP
Sbjct: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120

Query: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180
           PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN
Sbjct: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180

Query: 181 CCHGSPRSLYSCAHWH 197
           CCHGSPRSLYSCAHWH
Sbjct: 181 CCHGSPRSLYSCAHWH 196

[Close]

BLAST of Carg20201 vs. ExPASy TrEMBL
Match: A0A6J1KU55 (uncharacterized protein LOC111498688 OS=Cucurbita maxima OX=3661 GN=LOC111498688 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.6e-106
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           MRSN AAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSV+YSELMVKLVEFCGS
Sbjct: 1   MRSNTAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVTYSELMVKLVEFCGS 60

Query: 61  SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120
           SVTLKCQLP GDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP
Sbjct: 61  SVTLKCQLPDGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSP 120

Query: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180
           PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN
Sbjct: 121 PSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRN 180

Query: 181 CCHGSPRSLYSCAHWH 197
           CCHGSPRSLYSC HWH
Sbjct: 181 CCHGSPRSLYSCPHWH 196

[Close]

BLAST of Carg20201 vs. ExPASy TrEMBL
Match: A0A5D3BH99 (Octicosapeptide/Phox/Bem1p family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00990 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 165/196 (84.18%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 4   NAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVT 63
           N ++GT+KFLCSYGGKILPRQTDGKLRYVGGLTRVLAV+ SVS+SELMVKL EFCGSSVT
Sbjct: 7   NGSSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEFCGSSVT 66

Query: 64  LKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSS 123
           LKCQLPGGDLE LI+VRSDEDLANIVEEYDRASSSL HPLKIRAIL+PPKSLK++SPPSS
Sbjct: 67  LKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQISPPSS 126

Query: 124 VYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCH 183
           V   LPNSPCY ADSLPSSPQY  ++RISSPSYR+IRRIPSPPSKYFVG RNCHGR CCH
Sbjct: 127 VDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCHGRTCCH 186

Query: 184 GSPRSLYS---CAHWH 197
           GSPR LYS   C HW+
Sbjct: 187 GSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg20201 vs. ExPASy TrEMBL
Match: A0A1S3CLS3 (uncharacterized protein LOC103502365 OS=Cucumis melo OX=3656 GN=LOC103502365 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 165/196 (84.18%), Postives = 178/196 (90.82%), Query Frame = 0


Query: 4   NAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVT 63
           N ++GT+KFLCSYGGKILPRQTDGKLRYVGGLTRVLAV+ SVS+SELMVKL EFCGSSVT
Sbjct: 7   NGSSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEFCGSSVT 66

Query: 64  LKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSS 123
           LKCQLPGGDLE LI+VRSDEDLANIVEEYDRASSSL HPLKIRAIL+PPKSLK++SPPSS
Sbjct: 67  LKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQISPPSS 126

Query: 124 VYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCH 183
           V   LPNSPCY ADSLPSSPQY  ++RISSPSYR+IRRIPSPPSKYFVG RNCHGR CCH
Sbjct: 127 VDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCHGRTCCH 186

Query: 184 GSPRSLYS---CAHWH 197
           GSPR LYS   C HW+
Sbjct: 187 GSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg20201 vs. ExPASy TrEMBL
Match: A0A0A0LNT0 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002940 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.1e-89
Identity = 165/196 (84.18%), Postives = 177/196 (90.31%), Query Frame = 0


Query: 4   NAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVT 63
           N  +GT+KFLCSYGGKILPRQTDGKLRYVGGLTRVLAV+ SVS+SELMVKL EFCGSSVT
Sbjct: 7   NGTSGTLKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVERSVSFSELMVKLGEFCGSSVT 66

Query: 64  LKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSS 123
           LKCQLPGGDLE LI+VRSDEDLANIVEEYDRASSSL HPLKIRAIL+PPKSLK++SPPSS
Sbjct: 67  LKCQLPGGDLETLISVRSDEDLANIVEEYDRASSSLSHPLKIRAILSPPKSLKQISPPSS 126

Query: 124 VYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVGQRNCHGRNCCH 183
           V   LPNSPCY ADSLPSSPQY  ++RISSPSYR+IRRIPSPPSKYFVG RNCHGR CCH
Sbjct: 127 VDSTLPNSPCYGADSLPSSPQYGNSERISSPSYRFIRRIPSPPSKYFVGPRNCHGRTCCH 186

Query: 184 GSPRSLYS---CAHWH 197
           GSPR LYS   C HW+
Sbjct: 187 GSPRFLYSGPNCTHWN 202

[Close]

BLAST of Carg20201 vs. TAIR 10
Match: AT5G63130.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-40
Identity = 101/199 (50.75%), Postives = 124/199 (62.31%), Query Frame = 0


Query: 6   AAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVTLK 65
           +  ++KFLCSYGG+ILPR TDGKLRYVGG TRVL+VD S+S+SELM KL EFCG SV L+
Sbjct: 11  SGSSLKFLCSYGGRILPRSTDGKLRYVGGHTRVLSVDRSISFSELMKKLYEFCGYSVDLR 70

Query: 66  CQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKV-SPPSSV 125
           CQLP GDLE LI+V+S+E+LA IVEEYDR   +     KIRA+L+PP+S  K  S PSS 
Sbjct: 71  CQLPNGDLETLISVKSEEELAEIVEEYDRICGA-----KIRAVLSPPRSSHKTESSPSSS 130

Query: 126 YFNLPNSPCYSADSLPSSPQYAINDRISSPSY-RYIRR---IPS---PPSKYFVGQRNCH 185
               P SP     S P+SP         SP+Y RY++    +PS   PP +Y       H
Sbjct: 131 GDRSPKSPFSVTPSPPNSP---------SPAYGRYLQSRYCLPSTDLPPRRYIQRAEESH 190

Query: 186 GRNCCHGSPRSLYSCAHWH 197
              CC+       S   WH
Sbjct: 191 ---CCYACRVHKDSRLVWH 192

[Close]

BLAST of Carg20201 vs. TAIR 10
Match: AT3G48240.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-38
Identity = 83/139 (59.71%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 9   TMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGSSVTLKCQL 68
           ++KFLCSYGG+ILPR  DGKLRYVGG TRVL+V HS+S++EL +KL EFCG SV LKCQL
Sbjct: 13  SLKFLCSYGGRILPRSIDGKLRYVGGFTRVLSVHHSISFTELTMKLEEFCGYSVELKCQL 72

Query: 69  PGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSLKKVSPPSSVYFNL 128
           P GDLE LI+V+SDEDL NIVEEYDR         KIRAIL+PPK +   S       + 
Sbjct: 73  PNGDLETLISVKSDEDLVNIVEEYDRVYGG-----KIRAILSPPKQMSPRSSGGGGDLS- 132

Query: 129 PNSPCYSADSLPSSPQYAI 148
           P SP +S  + PS P+Y +
Sbjct: 133 PKSP-FSVVASPSPPRYCV 144

[Close]

BLAST of Carg20201 vs. TAIR 10
Match: AT3G26510.3 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 95/207 (45.89%), Postives = 121/207 (58.45%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           M ++    T+KFLCSYGGKILPR  DGKLRY GG TRVLAV  SVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSL 120
                +VT++CQLP  DL+ L+++ SDEDL N++EEYD  SSS   P+KIR  L PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSSS--SPMKIRVFLNPPKSA 120

Query: 121 ---KKVSPPSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVG 180
              KK  PP ++  +   S   +  S  SSP+        SPS       PSPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 QRNCHGRNC-CHGSPRSLY---SCAHW 196
           +  C+G  C  H + R++Y   +  HW
Sbjct: 181 KNPCYG--CYVHRNSRNIYLVHNGNHW 195

[Close]

BLAST of Carg20201 vs. TAIR 10
Match: AT3G26510.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 95/207 (45.89%), Postives = 121/207 (58.45%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           M ++    T+KFLCSYGGKILPR  DGKLRY GG TRVLAV  SVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSL 120
                +VT++CQLP  DL+ L+++ SDEDL N++EEYD  SSS   P+KIR  L PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSSS--SPMKIRVFLNPPKSA 120

Query: 121 ---KKVSPPSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVG 180
              KK  PP ++  +   S   +  S  SSP+        SPS       PSPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 QRNCHGRNC-CHGSPRSLY---SCAHW 196
           +  C+G  C  H + R++Y   +  HW
Sbjct: 181 KNPCYG--CYVHRNSRNIYLVHNGNHW 195

[Close]

BLAST of Carg20201 vs. TAIR 10
Match: AT3G26510.2 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 147.1 bits (370), Expect = 1.5e-35
Identity = 95/207 (45.89%), Postives = 121/207 (58.45%), Query Frame = 0


Query: 1   MRSNAAAGTMKFLCSYGGKILPRQTDGKLRYVGGLTRVLAVDHSVSYSELMVKLVEFCGS 60
           M ++    T+KFLCSYGGKILPR  DGKLRY GG TRVLAV  SVS+SEL  K+ E CG 
Sbjct: 1   MVTSPTNSTIKFLCSYGGKILPRYPDGKLRYNGGHTRVLAVPRSVSFSELASKMAEMCGG 60

Query: 61  -----SVTLKCQLPGGDLEMLITVRSDEDLANIVEEYDRASSSLLHPLKIRAILAPPKSL 120
                +VT++CQLP  DL+ L+++ SDEDL N++EEYD  SSS   P+KIR  L PPKS 
Sbjct: 61  VGGSITVTIRCQLPTEDLDALVSITSDEDLVNLIEEYDLVSSS--SPMKIRVFLNPPKSA 120

Query: 121 ---KKVSPPSSVYFNLPNSPCYSADSLPSSPQYAINDRISSPSYRYIRRIPSPPSKYFVG 180
              KK  PP ++  +   S   +  S  SSP+        SPS       PSPP    V 
Sbjct: 121 AGSKKSPPPLALPSSTTTSSSSTTSSTSSSPR--------SPSLSKPPLPPSPPRITTVT 180

Query: 181 QRNCHGRNC-CHGSPRSLY---SCAHW 196
           +  C+G  C  H + R++Y   +  HW
Sbjct: 181 KNPCYG--CYVHRNSRNIYLVHNGNHW 195

The following BLAST results are available for this feature:

BLAST of Carg20201 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933692.1	2.1e-108	100.00	uncharacterized protein LOC111441028 [Cucurbita moschata] >KAG7021427.1 hypothet...	[more]
KAG6587445.1	7.8e-108	99.49	hypothetical protein SDJN03_16010, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023005797.1	3.3e-106	97.96	uncharacterized protein LOC111498688 [Cucurbita maxima]	[more]
XP_038878416.1	4.8e-89	83.67	uncharacterized protein LOC120070656 [Benincasa hispida]	[more]
XP_008464503.1	8.1e-89	84.18	PREDICTED: uncharacterized protein LOC103502365 [Cucumis melo] >KAA0057813.1 Oct...	[more]

BLAST of Carg20201 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg20201 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F0I8	1.0e-108	100.00	uncharacterized protein LOC111441028 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1KU55	1.6e-106	97.96	uncharacterized protein LOC111498688 OS=Cucurbita maxima OX=3661 GN=LOC111498688...	[more]
A0A5D3BH99	3.9e-89	84.18	Octicosapeptide/Phox/Bem1p family protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CLS3	3.9e-89	84.18	uncharacterized protein LOC103502365 OS=Cucumis melo OX=3656 GN=LOC103502365 PE=...	[more]
A0A0A0LNT0	5.1e-89	84.18	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002940 PE=4 SV...	[more]

BLAST of Carg20201 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63130.1	1.1e-40	50.75	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G48240.1	4.1e-38	59.71	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.3	1.5e-35	45.89	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.1	1.5e-35	45.89	Octicosapeptide/Phox/Bem1p family protein	[more]
AT3G26510.2	1.5e-35	45.89	Octicosapeptide/Phox/Bem1p family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000270	PB1 domain	SMART	SM00666	PB1_new	coord: 24..112 e-value: 1.1E-21 score: 88.1
IPR000270	PB1 domain	PFAM	PF00564	PB1	coord: 25..98 e-value: 1.1E-16 score: 60.5
None	No IPR available	GENE3D	3.10.20.90		coord: 28..107 e-value: 5.8E-10 score: 41.2
None	No IPR available	PANTHER	PTHR31066:SF66	PB1 DOMAIN PROTEIN	coord: 4..193
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 4..193
None	No IPR available	CDD	cd06410	PB1_UP2	coord: 13..109 e-value: 4.17729E-39 score: 127.722
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 26..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20201-RA	Carg20201-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding