Carg20197 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20197
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr11: 331755 .. 333671 (+)
RNA-Seq ExpressionCarg20197
SyntenyCarg20197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGAAGAAAGGCAATTCTGACTTCCCTCACGCTGGCAAACTCGCTCTATTCGACTCGGTCTTGCTATTCTCAGGTGACTCGGTTTTTGCCTTCTTCTCTTTCTCATCAATCCCGCTTTCCCCCTTTCACAACAAATCCTCGTATACTGTTTTTCTCATCGAAGCCTCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAACTTTAGAAACAGAGTTAGAGACTTTAAACCCTACACTCACACACGAAACTATGGTCTATGTCTTGAAAAGACTCGATAAAGAACCCCAAAAGGCCTCGGATTTCTTCGACTGGGCCTGCGGGAAAAATGGGTCTACTCAGAGTTCTCCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCGATGAAGCAGTTTTGGATTACGTTGAGAGTTATGAAAGAACGGGGGTTTTACCTTGATGAGGAAACTTATTTGACCATTTTGGGAGTCTTGAAGAGGGCAAAGAAGGCCGCTGATGCCACGGCTTTGACTCATTTTTACAATCGGATGCTGCAAGAAAATGCCATGGATAGTGTGGTGCAGAAGGTGGTTAACATTGTTTTACAGTCCGAGTGGAATAATGATGTTGCTGAAAAACTTGAGGGGCTTGGCATTGTATTATCAGATAGCTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTTTCCATTGAAAGGCTTGAGCTTTTTTCATTGGGTTGGTTGTAGACCGGATTATGATCACAACACAGTTACATACAATGCAATTGCCAGGGTTTTGGGACGGGATGACTCGATTGAGGCGTTCTGGGGTTTGGTTGAAGAAATGAAGAATGCTGGTCATGAGATCGATATCGATACTTACATAAAGATCTCTAGGCAGTTTCAGAGGAGCAAGATGATGGGTGATGCTGTCAAGCTTTACGAGCTTATGATGGATGGGCCTTACAAACCCTCACTGCAGGATTGCAGTGTGCTTTTGCGGAGCATCTCTGCTAGTGATAATCCAGATTTGAGCTTAGTGTTTAGAGTGGCCAAGAAATTCGAGGCGACAGGGTACAGTCTCTCCAAGGCTGTTTACGATGGAATCCATAGGTCATTGACAAGTGCGGGAAAGTTCGATGAAGCGGAGAATATTGTAAAGTCTATGAGAAATGCAGGGTATGAACCTGACAATGTTACATACAGCCAATTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCTGTGAAGTGCTGGACGAGATGGAAGCACAAGGATGCGTTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAACGAAGTCGACAAGGCATTAGTTTGTTTTGCAAAGATGATAGAGAAGAATTGTGATCCCGACGCCGATCTTTTAGATGTTCTAATTAGCGGTTTCCTTGGCCAGAAAAAGTTAGATGGTGCTTACCAATTGCTGATTGAGTTGGTGAATAAGGCTCATTTAAGACCATGGCAGGCAACATACAAACATCTAATCGAAAAGCTCCTTGAAGTAAGGAAACTTGAGGAAGCTATTTCTCTTCTTAGGTTAATGAAGAAACAGAACTACCCACCTTTTCCTGAACCATTTGTTCAATATATCTCCAAGTTTGGTACAGTGGAGGATGCTGCTGAATTCTTGAAGGCTCTGAGCTCCAAAGAATATCCTTCCATGTCTGCCTATCTTCATGTTTTTAATTCATTTTTCAACGAAGGTAGACATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAGTGAAATTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAAGCACTACTCCTACTACTACTACTACTACTACTACTCAGTCTTCTCCCAATCCAATTGGAACTTAA

mRNA sequence

ATGGCGAGAAGAAAGGCAATTCTGACTTCCCTCACGCTGGCAAACTCGCTCTATTCGACTCGGTCTTGCTATTCTCAGGTGACTCGGTTTTTGCCTTCTTCTCTTTCTCATCAATCCCGCTTTCCCCCTTTCACAACAAATCCTCGTATACTGTTTTTCTCATCGAAGCCTCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAACTTTAGAAACAGAGTTAGAGACTTTAAACCCTACACTCACACACGAAACTATGGTCTATGTCTTGAAAAGACTCGATAAAGAACCCCAAAAGGCCTCGGATTTCTTCGACTGGGCCTGCGGGAAAAATGGGTCTACTCAGAGTTCTCCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCGATGAAGCAGTTTTGGATTACGTTGAGAGTTATGAAAGAACGGGGGTTTTACCTTGATGAGGAAACTTATTTGACCATTTTGGGAGTCTTGAAGAGGGCAAAGAAGGCCGCTGATGCCACGGCTTTGACTCATTTTTACAATCGGATGCTGCAAGAAAATGCCATGGATAGTGTGGTGCAGAAGGTGGTTAACATTGTTTTACAGTCCGAGTGGAATAATGATGTTGCTGAAAAACTTGAGGGGCTTGGCATTGTATTATCAGATAGCTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTTTCCATTGAAAGGCTTGAGCTTTTTTCATTGGGTTGGTTGTAGACCGGATTATGATCACAACACAGTTACATACAATGCAATTGCCAGGGTTTTGGGACGGGATGACTCGATTGAGGCGTTCTGGGGTTTGGTTGAAGAAATGAAGAATGCTGGTCATGAGATCGATATCGATACTTACATAAAGATCTCTAGGCAGTTTCAGAGGAGCAAGATGATGGGTGATGCTGTCAAGCTTTACGAGCTTATGATGGATGGGCCTTACAAACCCTCACTGCAGGATTGCAGTGTGCTTTTGCGGAGCATCTCTGCTAGTGATAATCCAGATTTGAGCTTAGTGTTTAGAGTGGCCAAGAAATTCGAGGCGACAGGGTACAGTCTCTCCAAGGCTGTTTACGATGGAATCCATAGGTCATTGACAAGTGCGGGAAAGTTCGATGAAGCGGAGAATATTGTAAAGTCTATGAGAAATGCAGGGTATGAACCTGACAATGTTACATACAGCCAATTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCTGTGAAGTGCTGGACGAGATGGAAGCACAAGGATGCGTTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAACGAAGTCGACAAGGCATTAGTTTGTTTTGCAAAGATGATAGAGAAGAATTGTGATCCCGACGCCGATCTTTTAGATGTTCTAATTAGCGGTTTCCTTGGCCAGAAAAAGTTAGATGGTGCTTACCAATTGCTGATTGAGTTGGTGAATAAGGCTCATTTAAGACCATGGCAGGCAACATACAAACATCTAATCGAAAAGCTCCTTGAAGTAAGGAAACTTGAGGAAGCTATTTCTCTTCTTAGGTTAATGAAGAAACAGAACTACCCACCTTTTCCTGAACCATTTGTTCAATATATCTCCAAGTTTGGTACAGTGGAGGATGCTGCTGAATTCTTGAAGGCTCTGAGCTCCAAAGAATATCCTTCCATGTCTGCCTATCTTCATGTTTTTAATTCATTTTTCAACGAAGGTAGACATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAGTGAAATTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAAGCACTACTCCTACTACTACTACTACTACTACTACTCAGTCTTCTCCCAATCCAATTGGAACTTAA

Coding sequence (CDS)

ATGGCGAGAAGAAAGGCAATTCTGACTTCCCTCACGCTGGCAAACTCGCTCTATTCGACTCGGTCTTGCTATTCTCAGGTGACTCGGTTTTTGCCTTCTTCTCTTTCTCATCAATCCCGCTTTCCCCCTTTCACAACAAATCCTCGTATACTGTTTTTCTCATCGAAGCCTCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAACTTTAGAAACAGAGTTAGAGACTTTAAACCCTACACTCACACACGAAACTATGGTCTATGTCTTGAAAAGACTCGATAAAGAACCCCAAAAGGCCTCGGATTTCTTCGACTGGGCCTGCGGGAAAAATGGGTCTACTCAGAGTTCTCCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCGATGAAGCAGTTTTGGATTACGTTGAGAGTTATGAAAGAACGGGGGTTTTACCTTGATGAGGAAACTTATTTGACCATTTTGGGAGTCTTGAAGAGGGCAAAGAAGGCCGCTGATGCCACGGCTTTGACTCATTTTTACAATCGGATGCTGCAAGAAAATGCCATGGATAGTGTGGTGCAGAAGGTGGTTAACATTGTTTTACAGTCCGAGTGGAATAATGATGTTGCTGAAAAACTTGAGGGGCTTGGCATTGTATTATCAGATAGCTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTTTCCATTGAAAGGCTTGAGCTTTTTTCATTGGGTTGGTTGTAGACCGGATTATGATCACAACACAGTTACATACAATGCAATTGCCAGGGTTTTGGGACGGGATGACTCGATTGAGGCGTTCTGGGGTTTGGTTGAAGAAATGAAGAATGCTGGTCATGAGATCGATATCGATACTTACATAAAGATCTCTAGGCAGTTTCAGAGGAGCAAGATGATGGGTGATGCTGTCAAGCTTTACGAGCTTATGATGGATGGGCCTTACAAACCCTCACTGCAGGATTGCAGTGTGCTTTTGCGGAGCATCTCTGCTAGTGATAATCCAGATTTGAGCTTAGTGTTTAGAGTGGCCAAGAAATTCGAGGCGACAGGGTACAGTCTCTCCAAGGCTGTTTACGATGGAATCCATAGGTCATTGACAAGTGCGGGAAAGTTCGATGAAGCGGAGAATATTGTAAAGTCTATGAGAAATGCAGGGTATGAACCTGACAATGTTACATACAGCCAATTGGTATTTGGACTTTGCAAGGCTAGGAGACTTGAGGAAGCCTGTGAAGTGCTGGACGAGATGGAAGCACAAGGATGCGTTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAACGAAGTCGACAAGGCATTAGTTTGTTTTGCAAAGATGATAGAGAAGAATTGTGATCCCGACGCCGATCTTTTAGATGTTCTAATTAGCGGTTTCCTTGGCCAGAAAAAGTTAGATGGTGCTTACCAATTGCTGATTGAGTTGGTGAATAAGGCTCATTTAAGACCATGGCAGGCAACATACAAACATCTAATCGAAAAGCTCCTTGAAGTAAGGAAACTTGAGGAAGCTATTTCTCTTCTTAGGTTAATGAAGAAACAGAACTACCCACCTTTTCCTGAACCATTTGTTCAATATATCTCCAAGTTTGGTACAGTGGAGGATGCTGCTGAATTCTTGAAGGCTCTGAGCTCCAAAGAATATCCTTCCATGTCTGCCTATCTTCATGTTTTTAATTCATTTTTCAACGAAGGTAGACATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCACATTCGAAAGCATAGTGAAATTTGTAAGCTCTTTGGATCTGCAGAAAGCAAAAGCACTACTCCTACTACTACTACTACTACTACTACTCAGTCTTCTCCCAATCCAATTGGAACTTAA

Protein sequence

MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT
Homology
[Close]
BLAST of Carg20197 vs. NCBI nr
Match: KAG7021423.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 638/638 (100.00%), Postives = 638/638 (100.00%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS
Sbjct: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 638

[Close]
BLAST of Carg20197 vs. NCBI nr
Match: KAG6587441.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1248.8 bits (3230), Expect = 0.0e+00
Identity = 632/638 (99.06%), Postives = 633/638 (99.22%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTN RILFFSSKPHSL
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNRRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSETLE ELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS
Sbjct: 61  LELVLANDWSETLEAELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVL+SEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKSTTP   TTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKSTTP---TTTTTQSSPNPIGT 635

[Close]
BLAST of Carg20197 vs. NCBI nr
Match: XP_022933685.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 631/638 (98.90%), Postives = 632/638 (99.06%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTN RILFFSSKPHSL
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNHRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS
Sbjct: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRI VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVL+SEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKS    TTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKS----TTTTTTTQSSPNPIGT 634

[Close]
BLAST of Carg20197 vs. NCBI nr
Match: XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 629/638 (98.59%), Postives = 634/638 (99.37%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSLTLANSL+STRS +SQVTRFLPSSLSHQSRFPPFTTN RI+FFSSKPHSL
Sbjct: 1   MARRKAILTSLTLANSLFSTRSSHSQVTRFLPSSLSHQSRFPPFTTNHRIMFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSE LETELETLNPTLTHETMVYVLKRLDKEPQKASDFF+WACGKNGSTQSS
Sbjct: 61  LELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH+FNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKSTTP TTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKSTTP-TTTTTTTQSSPNPIGT 637

[Close]
BLAST of Carg20197 vs. NCBI nr
Match: XP_022968869.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 620/638 (97.18%), Postives = 627/638 (98.28%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSL L NSL+STRS YSQVTRFLPSSLSHQSRFPPFTTN RILFFSSKPHSL
Sbjct: 1   MARRKAILTSLMLENSLFSTRSSYSQVTRFLPSSLSHQSRFPPFTTNHRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSE LETELETLNPTLTHETMVYVLKRLDKEPQKASDFF+WACGKNGSTQSS
Sbjct: 61  LELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVL+SEWNNDVAEKLEGLGIVLSDSFVIR LKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCR DYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKS+RNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLL LMKKQNYPP P
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKKQNYPPSP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH+FNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKST  TTTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKST--TTTTTTTTQSSPNPIGT 636

[Close]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 1.6e-208
Identity = 370/622 (59.49%), Postives = 470/622 (75.56%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNP-RILF----FSS 60
           M R  AIL+SL  A S  STRS  S+      S+LS  S    F   P R L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLS--SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  KPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNG 120
           KP S+L+LVL NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F DW    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADAT 180
            + S+P+YSI+LRI VQ  SMK+FW+TLR MK+ GFYLDE+TY TI G L + K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 ALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRN 240
           A+ HFY RML+ENAM  V  +V  +V + +W+ +V  +L+ + +VLSD+FVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 FPLKGLSFFHWV---GCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDI 300
            PLK L+FFHWV   G    Y H+TVTYNA  RVL R +S+  FW +V+EMK AG+++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVA 360
           DTYIK+SRQFQ+S+MM + VKLYE MMDGP+KPS+QDCS+LLR +S S NPDL LVFRV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKA 420
           +K+E+TG SLSKAVYDGIHRSLTS G+FDEAE I K+MRNAGYEPDN+TYSQLVFGLCKA
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 420

Query: 421 RRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLL 480
           +RLEEA  VLD+MEAQGC PDIKTWTILIQGHC  NE+DKAL CFA M+EK  D D++LL
Sbjct: 421 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 480

Query: 481 DVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMK 540
           DVLI GF+   K +GA   L+E+V  A+++PWQ+TYK LI+KLL+++K EEA+ LL++MK
Sbjct: 481 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 540

Query: 541 KQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKD 600
           KQNYP + E F  Y++KFGT+EDA +FL  LSSK+ PS +AY HV  +F+ EGR ++AK+
Sbjct: 541 KQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKN 600

Query: 601 LLFKCPHHIRKHSEICKLFGSA 615
           LLF CPHH + H +I +LFG+A
Sbjct: 601 LLFICPHHFKTHPKISELFGAA 620

[Close]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.3e-85
Identity = 179/551 (32.49%), Postives = 300/551 (54.45%), Query Frame = 0 

Query: 71  ETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSSPIYSILLRIF 130
           + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         SS  Y+ +LRIF
Sbjct: 95  DEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIF 154

Query: 131 VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAM 190
             N  + +FW  +  MK++G  +       +    K+     D   L   +     +N++
Sbjct: 155 GVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSV 214

Query: 191 DSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCR 250
           D V  +V  IV++  W  DV ++L  L +      V  VL++L   P K L FF W+   
Sbjct: 215 DKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDES 274

Query: 251 PDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGD 310
             + H+  TYNA+ARVLG++  ++ F  ++EE+++AG+E++++TY+++S +F ++KM+ +
Sbjct: 275 GSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKE 334

Query: 311 AVKLYELMMDGPYK--PSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGYSLSKAVYD 370
           AV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +   G  +   +  
Sbjct: 335 AVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQ 394

Query: 371 GIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQ 430
            + +SL S  +F ++  ++K+M   GY P     S +  GL +  + +EA E+++ MEA 
Sbjct: 395 HVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEAS 454

Query: 431 GCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDG 490
           G   D K    L++GHC A ++++A  CF KMI K     A    + L+  +    +   
Sbjct: 455 GNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARD 514

Query: 491 AYQLLIELVNKAHLRPWQATYKHLIEKLLEVR-----KLEEAISLLRLMKKQNYPPFPEP 550
            Y+L  ELV +  L+PW +TYK ++  LL  +       EEA+SLL +M+   +PPF +P
Sbjct: 515 VYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDP 574

Query: 551 FVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHHIR 610
           F+ Y+S  GT  +A  FLKA++SK++PS S  L VF +     RHSEA+DLL   P +IR
Sbjct: 575 FMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIR 634

Query: 611 KHSEICKLFGS 614
           +++E+ +LF +
Sbjct: 635 RNAEVLELFNT 645

[Close]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.2e-84
Identity = 176/579 (30.40%), Postives = 311/579 (53.71%), Query Frame = 0 

Query: 44  FTTNPRILFFSSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKA 103
           F++ P +   SS   +++++       + +  ELE+    ++ +  + VL++L+  P  A
Sbjct: 74  FSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVA 133

Query: 104 SDFFDWACGKNGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILG 163
             FF W    +    SS  Y+++LRI   N  + +FW  + VMK++G  L       +  
Sbjct: 134 KSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGD 193

Query: 164 VLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSD 223
             ++    +D   L   +     +N+ ++V  +V  IV++ EW +DV +++  L +    
Sbjct: 194 KFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKS 253

Query: 224 SFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEM 283
             V  +++ L   P K L FF W+     + H+  TYNA+ARVLG++  ++ F  +V EM
Sbjct: 254 DLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEM 313

Query: 284 KNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDG---PYKPSLQDCSVLLRSISAS 343
           ++AG+E++I+TY+++S +F ++K++ +AV L+E+ M G      P+     +LL+ I  +
Sbjct: 314 RSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTA 373

Query: 344 DNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNV 403
              D+ L  R  K +   G +L+ ++   + +SL S  + +++  ++K M+  GY P   
Sbjct: 374 KILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGD 433

Query: 404 TYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKM 463
             S +   L +  + +EA E +D ME+ G   D K    L++G+C +  +D+ALVCF KM
Sbjct: 434 MQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKM 493

Query: 464 IEKNCDPDADL-LDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVR 523
           +       AD   + L+  +  + ++  AY+LL   V K  L+P  +TYK L+  LL  +
Sbjct: 494 VGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKK 553

Query: 524 -----KLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAY 583
                  EEA+SLL +MK   +PPF +PF+ Y S  G   +A  FLKA++S  +P +S  
Sbjct: 554 IARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVV 613

Query: 584 LHVFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGS 614
           L VF +     RHSEA+DLL  CP++IR + ++ +LF +
Sbjct: 614 LRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

[Close]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.6e-32
Identity = 94/382 (24.61%), Postives = 178/382 (46.60%), Query Frame = 0 

Query: 218 GIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFW 277
           G+ L    + RVL    +    G  FF W   +P Y H+   Y ++ ++L +     A W
Sbjct: 108 GVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVW 167

Query: 278 GLVEEMKNAGHE-IDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 337
           GL+EEM+    + I+ + ++ + ++F  + M+  A+++ + M    ++P       LL +
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227

Query: 338 ISASDNPDLSLVFRVAKKFE--ATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAG 397
           +    +     V   AK FE     + ++   +  +       GK  EA+ ++  M  AG
Sbjct: 228 LCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 287

Query: 398 YEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKAL 457
           +EPD V Y+ L+ G   A ++ +A ++L +M  +G  P+   +T+LIQ  C  + +++A+
Sbjct: 288 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 347

Query: 458 VCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEK 517
             F +M    C+ D      L+SGF    K+D  Y +L +++ K  L P + TY H++  
Sbjct: 348 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMHIMVA 407

Query: 518 LLEVRKLEEAISLLRLMKKQNYPP---FPEPFVQYISKFGTVEDAAEFLKALSSKEY-PS 577
             +    EE + L+  M++  Y P        ++   K G V++A      +      P 
Sbjct: 408 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 467

Query: 578 MSAYLHVFNSFFNEGRHSEAKD 593
           +  ++ + N   ++G   EA D
Sbjct: 468 VDTFVIMINGLASQGCLLEASD 483

[Close]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-28
Identity = 97/402 (24.13%), Postives = 186/402 (46.27%), Query Frame = 0 

Query: 194 VQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDY 253
           V KV++ +   + N +    L+ + + LS   ++ VL+  R+       FF W   R  +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 254 DHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVK 313
            H++ TYN++  +L +    E    ++EEM   G  + ++T+    + F  +K    AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVG 253

Query: 314 LYELMMDGPYKPSLQDCSVLLRSIS-ASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHR 373
           ++ELM    +K  ++  + LL S+  A    +  ++F   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 374 SLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVP 433
                    EA  I   M + G +PD V ++ ++ GL ++R+  +A ++   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 434 DIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 493
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKLD  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 494 IELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGT 553
            E+  K H  P   TY  LI+ +   +  E A  +   M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 554 VED----AAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEA 591
             +     A + + +     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

[Close]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match: A0A6J1F5I7 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441023 PE=3 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 631/638 (98.90%), Postives = 632/638 (99.06%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTN RILFFSSKPHSL
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNHRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS
Sbjct: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRI VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVL+SEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKS    TTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKS----TTTTTTTQSSPNPIGT 634

[Close]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match: A0A6J1I0W9 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468041 PE=4 SV=1)

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 620/638 (97.18%), Postives = 627/638 (98.28%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSSKPHSL 60
           MARRKAILTSL L NSL+STRS YSQVTRFLPSSLSHQSRFPPFTTN RILFFSSKPHSL
Sbjct: 1   MARRKAILTSLMLENSLFSTRSSYSQVTRFLPSSLSHQSRFPPFTTNHRILFFSSKPHSL 60

Query: 61  LELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSS 120
           LELVLANDWSE LETELETLNPTLTHETMVYVLKRLDKEPQKASDFF+WACGKNGSTQSS
Sbjct: 61  LELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQSS 120

Query: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180
           PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF
Sbjct: 121 PIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHF 180

Query: 181 YNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKG 240
           YNRMLQENAMDSVVQKVVNIVL+SEWNNDVAEKLEGLGIVLSDSFVIR LKELRNFPLKG
Sbjct: 181 YNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKELRNFPLKG 240

Query: 241 LSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300
           LSFFHWVGCR DYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR
Sbjct: 241 LSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISR 300

Query: 301 QFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360
           QFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY
Sbjct: 301 QFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGY 360

Query: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420
           SLSKAVYDGIHRSLTSAGKFDEAENIVKS+RNAGYEPDNVTYSQLVFGLCKARRLEEACE
Sbjct: 361 SLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKARRLEEACE 420

Query: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480
           VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL
Sbjct: 421 VLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFL 480

Query: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFP 540
           GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLL LMKKQNYPP P
Sbjct: 481 GQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKKQNYPPSP 540

Query: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHH 600
           EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLH+FNSFFNEGRHSEAKDLLFKCPHH
Sbjct: 541 EPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPHH 600

Query: 601 IRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           IRKHSEICKLFGSAESKST  TTTTTTTTQSSPNPIGT
Sbjct: 601 IRKHSEICKLFGSAESKST--TTTTTTTTQSSPNPIGT 636

[Close]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match: A0A6J1C114 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007295 PE=4 SV=1)

HSP 1 Score: 1105.5 bits (2858), Expect = 0.0e+00
Identity = 559/643 (86.94%), Postives = 594/643 (92.38%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANS-----LYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNPRILFFSS 60
           M RR AILTSL LANS     + STRS Y QVTRF P+S+SH+S F  F +   +LFFSS
Sbjct: 1   MTRRTAILTSLRLANSFLSAQISSTRSLYPQVTRFSPTSVSHRSHFLDFKSTHPLLFFSS 60

Query: 61  KPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNG 120
           KPHSLL+ VLANDWS+ LE ELETLNPTLTHET+VYVLKRLDKEPQKAS FF+WACGKNG
Sbjct: 61  KPHSLLQFVLANDWSQDLENELETLNPTLTHETVVYVLKRLDKEPQKASGFFNWACGKNG 120

Query: 121 STQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADAT 180
            TQSS IYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLT+LG+L+RAKKAADAT
Sbjct: 121 FTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTMLGILRRAKKAADAT 180

Query: 181 ALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRN 240
           ALTHFYNRMLQENAMDSVVQKVVNIVL SEW++DVAE LEGLGIVLSD+FVIR LKELRN
Sbjct: 181 ALTHFYNRMLQENAMDSVVQKVVNIVLGSEWSSDVAENLEGLGIVLSDNFVIRALKELRN 240

Query: 241 FPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTY 300
           FPLK LSFFHWVGCR D+DHNTVTYNAIARVLGRDDSIEAFWG+V+EMKNAGHEIDIDTY
Sbjct: 241 FPLKALSFFHWVGCRLDFDHNTVTYNAIARVLGRDDSIEAFWGVVDEMKNAGHEIDIDTY 300

Query: 301 IKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKF 360
           IKISRQFQRSKMMG+AVKLYELMMDGPY+PSLQDCSVLLRSISASDNPDLSLVFRVAKK+
Sbjct: 301 IKISRQFQRSKMMGEAVKLYELMMDGPYRPSLQDCSVLLRSISASDNPDLSLVFRVAKKY 360

Query: 361 EATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRL 420
           EATGYSLSKA+YDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRL
Sbjct: 361 EATGYSLSKAIYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRL 420

Query: 421 EEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVL 480
           EEAC++LDEMEA+GC+PDIKTWTILIQGHCT NEVDKALVCFAKMIE+NCDPDADLLDVL
Sbjct: 421 EEACKLLDEMEAEGCIPDIKTWTILIQGHCTTNEVDKALVCFAKMIERNCDPDADLLDVL 480

Query: 481 ISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQN 540
           I GFLGQ+KLDGAYQLLIELVNKAHLRPWQATYK LIEKLLEVRKLEEAI+LLRLMKKQN
Sbjct: 481 IDGFLGQRKLDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKLEEAITLLRLMKKQN 540

Query: 541 YPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLF 600
           YPPF EPFV YISKFGTVEDAA+FLK LSSKEYPS+SAYLHVFNSFFNEGR SEAKDLLF
Sbjct: 541 YPPFSEPFVLYISKFGTVEDAADFLKVLSSKEYPSVSAYLHVFNSFFNEGRCSEAKDLLF 600

Query: 601 KCPHHIRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           KCPHHIRKHSE+CKLFGSAESKS     T  T + S P  +GT
Sbjct: 601 KCPHHIRKHSEVCKLFGSAESKS-----TDATKSSSKPLEVGT 638

[Close]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match: A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)

HSP 1 Score: 1070.1 bits (2766), Expect = 3.6e-309
Identity = 540/639 (84.51%), Postives = 583/639 (91.24%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSS-LSHQSRFPPFTTNPRILFFSSKPHS 60
           M RR AI TSL LANS +STRS Y QVTRF PSS +SHQS    FT N  +LFFSS P S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120
           LL+LV  NDWSE LETELETLNPTLTHET+VYVLKRLDK+PQKAS+FF+WA GKNGSTQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYS+LLRIFVQNESMK FWITLR+MKERGFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVL S+W+NDV  KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
            LSFFHWVGCRPDYDHNTV+YNAIARVLGRDDSIEAFWG++EEMK+A HEIDIDTYIKIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
           RQFQ+SKMMG+AVKLYELMMDGPYKPSLQDCSVLLR+I+ASDNPDLSLV+RVAKKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTS GKFD+AENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420

Query: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHC ANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
           L QKKL+GAYQLLIEL NKAH+RPWQATYK LI+ LLEVRKLEEAI+LLRLMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKSTTPTTTTTTTTQSSPNPIGT 639
           HIRKH+E+CKLFGSAES        TT  TQSS NPI T
Sbjct: 601 HIRKHNEVCKLFGSAES-------NTTAATQSSSNPIET 632

[Close]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match: A0A5A7UW70 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001030 PE=4 SV=1)

HSP 1 Score: 1065.8 bits (2755), Expect = 6.8e-308
Identity = 530/623 (85.07%), Postives = 578/623 (92.78%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSS-LSHQSRFPPFTTNPRILFFSSKPHS 60
           M RR AI TSL LANS +STRS Y QVTRF PSS +SHQS  P F  N  +LFFSS PHS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPHFRINHPVLFFSSNPHS 60

Query: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120
           LLELV  NDWSE LETELETLNPTLTHET+VYVLKRLDK+PQKASDFF+WA GKNGSTQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRIFVQNESMK FWITLR+MKERGFYLDEETYLTILGVL++AKKAADATAL H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
           FYNRMLQENAMDSVVQKVV+IVL S+W+NDVA KLE LGI LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
            LSFF+WVGCRPDYDHNTV+YNAIARVL R+DSI+AFWG++EEMKNA  +IDIDTYIKIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
           RQFQ+SKMMGDAVKLYELMMDGPYKPSL DCS+LLR+I+ASDNPDLSLV+RVAKKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTS GKFD+AE+IVKSMRNAGYEPDNVT+SQLVFGLCKARRL+EA 
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
           EVLDEMEAQGC+PDIKTWT+LIQGHC AN++D ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
           L QKKLDGAYQLLIEL NKAH+RPWQATYKHLI+ LLEVRKLEEA++LLRLMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600
           PEPFVQYISKFGTV+DA +FLK LSSKEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKSTTPT 623
           HIRKH+E+CKLFGSAESK+T  T
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

[Close]
BLAST of Carg20197 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 727.2 bits (1876), Expect = 1.1e-209
Identity = 370/622 (59.49%), Postives = 470/622 (75.56%), Query Frame = 0 

Query: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLPSSLSHQSRFPPFTTNP-RILF----FSS 60
           M R  AIL+SL  A S  STRS  S+      S+LS  S    F   P R L+    FSS
Sbjct: 1   MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLS--SPLDSFAIVPSRFLWKFRTFSS 60

Query: 61  KPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNG 120
           KP S+L+LVL NDWS+ +E  L   + +LTHET +YVL++L+K P+KA  F DW    +G
Sbjct: 61  KPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSG 120

Query: 121 STQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADAT 180
            + S+P+YSI+LRI VQ  SMK+FW+TLR MK+ GFYLDE+TY TI G L + K  ADA 
Sbjct: 121 LSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAV 180

Query: 181 ALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRN 240
           A+ HFY RML+ENAM  V  +V  +V + +W+ +V  +L+ + +VLSD+FVIRVLKELR 
Sbjct: 181 AVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELRE 240

Query: 241 FPLKGLSFFHWV---GCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDI 300
            PLK L+FFHWV   G    Y H+TVTYNA  RVL R +S+  FW +V+EMK AG+++D+
Sbjct: 241 HPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDL 300

Query: 301 DTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVA 360
           DTYIK+SRQFQ+S+MM + VKLYE MMDGP+KPS+QDCS+LLR +S S NPDL LVFRV+
Sbjct: 301 DTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVS 360

Query: 361 KKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKA 420
           +K+E+TG SLSKAVYDGIHRSLTS G+FDEAE I K+MRNAGYEPDN+TYSQLVFGLCKA
Sbjct: 361 RKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKA 420

Query: 421 RRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLL 480
           +RLEEA  VLD+MEAQGC PDIKTWTILIQGHC  NE+DKAL CFA M+EK  D D++LL
Sbjct: 421 KRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLL 480

Query: 481 DVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMK 540
           DVLI GF+   K +GA   L+E+V  A+++PWQ+TYK LI+KLL+++K EEA+ LL++MK
Sbjct: 481 DVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMK 540

Query: 541 KQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKD 600
           KQNYP + E F  Y++KFGT+EDA +FL  LSSK+ PS +AY HV  +F+ EGR ++AK+
Sbjct: 541 KQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKN 600

Query: 601 LLFKCPHHIRKHSEICKLFGSA 615
           LLF CPHH + H +I +LFG+A
Sbjct: 601 LLFICPHHFKTHPKISELFGAA 620

[Close]
BLAST of Carg20197 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 318.9 bits (816), Expect = 9.1e-87
Identity = 179/551 (32.49%), Postives = 300/551 (54.45%), Query Frame = 0 

Query: 71  ETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQSSPIYSILLRIF 130
           + +  EL++ +  ++HE  + VL+ L+  P  A  FF W         SS  Y+ +LRIF
Sbjct: 95  DEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIF 154

Query: 131 VQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAM 190
             N  + +FW  +  MK++G  +       +    K+     D   L   +     +N++
Sbjct: 155 GVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSV 214

Query: 191 DSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCR 250
           D V  +V  IV++  W  DV ++L  L +      V  VL++L   P K L FF W+   
Sbjct: 215 DKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDES 274

Query: 251 PDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGD 310
             + H+  TYNA+ARVLG++  ++ F  ++EE+++AG+E++++TY+++S +F ++KM+ +
Sbjct: 275 GSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKE 334

Query: 311 AVKLYELMMDGPYK--PSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATGYSLSKAVYD 370
           AV+L+E  M G     P+   CS+LL+ I  +   D+ L  R  K +   G  +   +  
Sbjct: 335 AVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQ 394

Query: 371 GIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQ 430
            + +SL S  +F ++  ++K+M   GY P     S +  GL +  + +EA E+++ MEA 
Sbjct: 395 HVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEAS 454

Query: 431 GCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDG 490
           G   D K    L++GHC A ++++A  CF KMI K     A    + L+  +    +   
Sbjct: 455 GNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARD 514

Query: 491 AYQLLIELVNKAHLRPWQATYKHLIEKLLEVR-----KLEEAISLLRLMKKQNYPPFPEP 550
            Y+L  ELV +  L+PW +TYK ++  LL  +       EEA+SLL +M+   +PPF +P
Sbjct: 515 VYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDP 574

Query: 551 FVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPHHIR 610
           F+ Y+S  GT  +A  FLKA++SK++PS S  L VF +     RHSEA+DLL   P +IR
Sbjct: 575 FMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIR 634

Query: 611 KHSEICKLFGS 614
           +++E+ +LF +
Sbjct: 635 RNAEVLELFNT 645

[Close]
BLAST of Carg20197 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.8 bits (800), Expect = 6.5e-85
Identity = 176/579 (30.40%), Postives = 311/579 (53.71%), Query Frame = 0 

Query: 44  FTTNPRILFFSSKPHSLLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKA 103
           F++ P +   SS   +++++       + +  ELE+    ++ +  + VL++L+  P  A
Sbjct: 74  FSSEPAVEEKSSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVA 133

Query: 104 SDFFDWACGKNGSTQSSPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILG 163
             FF W    +    SS  Y+++LRI   N  + +FW  + VMK++G  L       +  
Sbjct: 134 KSFFQWIKEASPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGD 193

Query: 164 VLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSD 223
             ++    +D   L   +     +N+ ++V  +V  IV++ EW +DV +++  L +    
Sbjct: 194 KFQKDGLESDLLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKS 253

Query: 224 SFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEM 283
             V  +++ L   P K L FF W+     + H+  TYNA+ARVLG++  ++ F  +V EM
Sbjct: 254 DLVKMIVERLDVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEM 313

Query: 284 KNAGHEIDIDTYIKISRQFQRSKMMGDAVKLYELMMDG---PYKPSLQDCSVLLRSISAS 343
           ++AG+E++I+TY+++S +F ++K++ +AV L+E+ M G      P+     +LL+ I  +
Sbjct: 314 RSAGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTA 373

Query: 344 DNPDLSLVFRVAKKFEATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNV 403
              D+ L  R  K +   G +L+ ++   + +SL S  + +++  ++K M+  GY P   
Sbjct: 374 KILDMDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGD 433

Query: 404 TYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKM 463
             S +   L +  + +EA E +D ME+ G   D K    L++G+C +  +D+ALVCF KM
Sbjct: 434 MQSMIASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKM 493

Query: 464 IEKNCDPDADL-LDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVR 523
           +       AD   + L+  +  + ++  AY+LL   V K  L+P  +TYK L+  LL  +
Sbjct: 494 VGNTGVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKK 553

Query: 524 -----KLEEAISLLRLMKKQNYPPFPEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAY 583
                  EEA+SLL +MK   +PPF +PF+ Y S  G   +A  FLKA++S  +P +S  
Sbjct: 554 IARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVV 613

Query: 584 LHVFNSFFNEGRHSEAKDLLFKCPHHIRKHSEICKLFGS 614
           L VF +     RHSEA+DLL  CP++IR + ++ +LF +
Sbjct: 614 LRVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

[Close]
BLAST of Carg20197 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-33
Identity = 94/382 (24.61%), Postives = 178/382 (46.60%), Query Frame = 0 

Query: 218 GIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFW 277
           G+ L    + RVL    +    G  FF W   +P Y H+   Y ++ ++L +     A W
Sbjct: 108 GVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVW 167

Query: 278 GLVEEMKNAGHE-IDIDTYIKISRQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRS 337
           GL+EEM+    + I+ + ++ + ++F  + M+  A+++ + M    ++P       LL +
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDA 227

Query: 338 ISASDNPDLSLVFRVAKKFE--ATGYSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAG 397
           +    +     V   AK FE     + ++   +  +       GK  EA+ ++  M  AG
Sbjct: 228 LCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 287

Query: 398 YEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKAL 457
           +EPD V Y+ L+ G   A ++ +A ++L +M  +G  P+   +T+LIQ  C  + +++A+
Sbjct: 288 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 347

Query: 458 VCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEK 517
             F +M    C+ D      L+SGF    K+D  Y +L +++ K  L P + TY H++  
Sbjct: 348 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMHIMVA 407

Query: 518 LLEVRKLEEAISLLRLMKKQNYPP---FPEPFVQYISKFGTVEDAAEFLKALSSKEY-PS 577
             +    EE + L+  M++  Y P        ++   K G V++A      +      P 
Sbjct: 408 HEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPG 467

Query: 578 MSAYLHVFNSFFNEGRHSEAKD 593
           +  ++ + N   ++G   EA D
Sbjct: 468 VDTFVIMINGLASQGCLLEASD 483

[Close]
BLAST of Carg20197 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 7.8e-30
Identity = 97/402 (24.13%), Postives = 186/402 (46.27%), Query Frame = 0 

Query: 194 VQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLKGLSFFHWVGCRPDY 253
           V KV++ +   + N +    L+ + + LS   ++ VL+  R+       FF W   R  +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 254 DHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKISRQFQRSKMMGDAVK 313
            H++ TYN++  +L +    E    ++EEM   G  + ++T+    + F  +K    AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFAAAKERKKAVG 253

Query: 314 LYELMMDGPYKPSLQDCSVLLRSIS-ASDNPDLSLVFRVAKKFEATGYSLSKAVYDGIHR 373
           ++ELM    +K  ++  + LL S+  A    +  ++F   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 374 SLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEACEVLDEMEAQGCVP 433
                    EA  I   M + G +PD V ++ ++ GL ++R+  +A ++   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 434 DIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 493
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKLD  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 494 IELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPFPEPFVQYISKFGT 553
            E+  K H  P   TY  LI+ +   +  E A  +   M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 554 VED----AAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEA 591
             +     A + + +     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

The following BLAST results are available for this feature:
BLAST of Carg20197 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7021423.10.0e+00100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
KAG6587441.10.0e+0099.06Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022933685.10.0e+0098.90pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
XP_023530746.10.0e+0098.59pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
XP_022968869.10.0e+0097.18pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
BLAST of Carg20197 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9STK51.6e-20859.49Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9M8911.3e-8532.49Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF19.2e-8430.40Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9FH871.6e-3224.61Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
Q9LZP31.1e-2824.13Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
BLAST of Carg20197 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F5I70.0e+0098.90pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... [more]
A0A6J1I0W90.0e+0097.18pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... [more]
A0A6J1C1140.0e+0086.94pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordic... [more]
A0A0A0LNT73.6e-30984.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1[more]
A0A5A7UW706.8e-30885.07Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Carg20197 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G48250.11.1e-20959.49Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02490.19.1e-8732.49Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.16.5e-8530.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G65820.11.2e-3324.61Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62470.17.8e-3024.13Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 221..344
e-value: 2.9E-13
score: 51.5
coord: 60..216
e-value: 1.9E-8
score: 35.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 497..628
e-value: 4.0E-5
score: 25.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 345..496
e-value: 1.9E-34
score: 121.4
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 308..475
e-value: 1.5E-12
score: 47.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 436..469
e-value: 4.4E-8
score: 30.8
coord: 372..398
e-value: 0.001
score: 17.1
coord: 400..434
e-value: 1.4E-10
score: 38.7
coord: 258..291
e-value: 3.1E-4
score: 18.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 258..287
e-value: 0.66
score: 10.3
coord: 507..535
e-value: 0.15
score: 12.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 433..467
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 504..538
score: 8.747175
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 363..397
score: 9.437737
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 8.79102
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 398..432
score: 13.153618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..638
NoneNo IPR availablePANTHERPTHR47003:SF2OS01G0970900 PROTEINcoord: 1..614
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 1..614

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20197-RACarg20197-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding