Carg20179 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20179
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Mitochondrial pyruvate carrier
Location	Carg_Chr11: 219329 .. 220714 (+)
RNA-Seq Expression	Carg20179
Synteny	Carg20179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAAACCCCGCCAAATAGGCTCACAAAAAGCATGCTCCTCCGCACCGCGCTCTCGTTTGCACTACCGCCGCCCAGCCATTCCGACCTTCGTCTTCAAGTTCCTGTTCCTCGCGATGGTTCCACATTCTCAGGATTAGTGTATTTGCTTCAAGATATTCTTCTCTCTTTTGCTCTGTTCCTCGAGCGGCTCTGGCAATTTGCGGTGGAGATACCTAATCTTCGATCGATCAATTTCGGTCGCAATCAAGTCCAAATTCACGGATCAAATTTTTTAATCGCGGAATTTTCTATTCGATTACGCATTCACTCGTCAGACCAAAGTTTATCGCGTAGGGAAAAGTGATAGCGATGGTAAAGATTAAGAAATCGATTTCTTGCTCTTCTTTCTTTCCTTTATTTTATAGCAATTTTAAGGATACATCCTTGGACTGACTTTCGTAGATTTGCCTATTGCTTTTGATTTTCTTTAATTTCTTAGCCTCCGTGCGATTGTCATTCGTAGCGGCAGCCAAAGCAATAGTTCGAGGCGGCTTCGATGTCTTCGTTCCGAGCGTTCCGAGCGTTCCTCAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGCTGCAAACTTCGGTTTCGTGGTTGCTGTATGATCTGTTAATCTAATATTACAGTATCTCGAGTCTTGATTTCTCATCATCCTTTTTCAACTTCTTCTCTGTCTGTGGTGTCTTCAATCGCAGGGGCTGGCAGATGTGAAAAAGCCAGCCGATAAGATATCCGGCAAAATGACGGCAGGTTCAAAAAATTTGTGCTGTTCATGCTCGATTTTACCAAAATAAGTTATGTTCCACGGATGAACTCTTTTGAATATAATAAACAAGAAATTGTAACGAGTGTGTTGATGATCTGCAGTTTTGTGCGTCTATTCGCTGTCTGGCATGAGATTTGGATATATGGTTCGGCCTCGGAATTATCTGCTTATGGGATGCCATGCCGCGAATGAAACTGTTCAGCTCTATCTTCTCTCCCGTTGGGCGATGGGAAGGAGGAAGAGTGTCAATTACAGCAACGAGTAGCTTCCTCTTCGTTTCAATGGCGGTATGAATATGATTACTCCATTGTTGCTGTTTCGAATTACTGTTTCTTATGTGTTACCCCAATACCAATCCCCAATAAACAAGTAGCCTTGAAAAACAAAAATGCTCTGCTCATTTTGAATATACTGTTAGATTCAACGAATTCAATCTATATAGTCAGTGCCTTTTAATTTCATTTACTTGGAACAATATCATTCATAGTTCGTTATTGAATACAATTGTTCAGTTTTTATCTCGACAGCTTAACTTTGTATCGAATTTATCATAAAGTCAATAAATGCTGTAATCAATGTTTT

mRNA sequence

GCAAACCCCGCCAAATAGGCTCACAAAAAGCATGCTCCTCCGCACCGCGCTCTCGTTTGCACTACCGCCGCCCAGCCATTCCGACCTTCGTCTTCAAGTTCCTGTTCCTCGCGATGGTTCCACATTCTCAGGATTAGTGTATTTGCTTCAAGATATTCTTCTCTCTTTTGCTCTGTTCCTCGAGCGGCTCTGGCAATTTGCGGTGGAGATACCTAATCTTCGATCGATCAATTTCGGTCGCAATCAAGTCCAAATTCACGGATCAAATTTTTTAATCGCGGAATTTTCTATTCGATTACGCATTCACTCGTCAGACCAAAGTTTATCGCGTAGGGAAAAGTGATAGCGATGCCTCCGTGCGATTGTCATTCGTAGCGGCAGCCAAAGCAATAGTTCGAGGCGGCTTCGATGTCTTCGTTCCGAGCGTTCCGAGCGTTCCTCAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGCTGCAAACTTCGGTTTCGTGGTTGCTGGGCTGGCAGATGTGAAAAAGCCAGCCGATAAGATATCCGGCAAAATGACGGCAGTTTTGTGCGTCTATTCGCTGTCTGGCATGAGATTTGGATATATGGTTCGGCCTCGGAATTATCTGCTTATGGGATGCCATGCCGCGAATGAAACTGTTCAGCTCTATCTTCTCTCCCGTTGGGCGATGGGAAGGAGGAAGAGTGTCAATTACAGCAACGAGTAGCTTCCTCTTCGTTTCAATGGCGGTATGAATATGATTACTCCATTGTTGCTGTTTCGAATTACTGTTTCTTATGTGTTACCCCAATACCAATCCCCAATAAACAAGTAGCCTTGAAAAACAAAAATGCTCTGCTCATTTTGAATATACTGTTAGATTCAACGAATTCAATCTATATAGTCAGTGCCTTTTAATTTCATTTACTTGGAACAATATCATTCATAGTTCGTTATTGAATACAATTGTTCAGTTTTTATCTCGACAGCTTAACTTTGTATCGAATTTATCATAAAGTCAATAAATGCTGTAATCAATGTTTT

Coding sequence (CDS)

ATGTCTTCGTTCCGAGCGTTCCGAGCGTTCCTCAACAGTCCTGTTGGCCCTAAAACAACTCATTTTTGGGGACCTGCTGCAAACTTCGGTTTCGTGGTTGCTGGGCTGGCAGATGTGAAAAAGCCAGCCGATAAGATATCCGGCAAAATGACGGCAGTTTTGTGCGTCTATTCGCTGTCTGGCATGAGATTTGGATATATGGTTCGGCCTCGGAATTATCTGCTTATGGGATGCCATGCCGCGAATGAAACTGTTCAGCTCTATCTTCTCTCCCGTTGGGCGATGGGAAGGAGGAAGAGTGTCAATTACAGCAACGAGTAG

Protein sequence

MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE

Homology

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BLAST of Carg20179 vs. NCBI nr
Match: KAG6587422.1 (Mitochondrial pyruvate carrier 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021405.1 Mitochondrial pyruvate carrier 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.9 bits (564), Expect = 2.7e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60
           MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS
Sbjct: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60

Query: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE
Sbjct: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 106

[Close]

BLAST of Carg20179 vs. NCBI nr
Match: XP_022933393.1 (mitochondrial pyruvate carrier 1-like [Cucurbita moschata] >XP_022933394.1 mitochondrial pyruvate carrier 1-like [Cucurbita moschata] >XP_022933395.1 mitochondrial pyruvate carrier 1-like [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 1.3e-53
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60
           MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS
Sbjct: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60

Query: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSNE
Sbjct: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGTRKSVNYSNE 106

[Close]

BLAST of Carg20179 vs. NCBI nr
Match: XP_023531564.1 (mitochondrial pyruvate carrier 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 207.2 bits (526), Expect = 6.9e-50
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVN+SNE
Sbjct: 63  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGTRKSVNHSNE 103

[Close]

BLAST of Carg20179 vs. NCBI nr
Match: XP_022973945.1 (mitochondrial pyruvate carrier 1-like [Cucurbita maxima] >XP_022973954.1 mitochondrial pyruvate carrier 1-like [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 9.0e-50
Identity = 97/101 (96.04%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISG+MTAVLC+YSLSGMRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGRMTAVLCLYSLSGMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSNE
Sbjct: 63  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGTRKSVNYSNE 103

[Close]

BLAST of Carg20179 vs. NCBI nr
Match: XP_008464463.1 (PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo] >KAA0057785.1 mitochondrial pyruvate carrier 1-like [Cucumis melo var. makuwa] >TYJ98469.1 mitochondrial pyruvate carrier 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPVANFGFVAAGLADVKKPADMISGRMTAVLCVYSLLCMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSNE
Sbjct: 63  YMVRPRNYLLMGCHAANESVQLYLLSRWAMGQRKTVDYSNE 103

[Close]

BLAST of Carg20179 vs. ExPASy Swiss-Prot
Match: Q949R9 (Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana OX=3702 GN=MPC1 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.7e-33
Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 7  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGY 66
          F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +
Sbjct: 6  FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRFAW 65

Query: 67 MVRPRNYLLMGCHAANETVQLYLLSRWA 95
          MV+PRNYLL+ CHA+NETVQLY LSRWA
Sbjct: 66 MVQPRNYLLLACHASNETVQLYQLSRWA 93

[Close]

BLAST of Carg20179 vs. ExPASy Swiss-Prot
Match: Q3ZCG2 (Mitochondrial pyruvate carrier 1 OS=Bos taurus OX=9913 GN=MPC1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-18
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 19 TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGC 78
          +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  C
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 79 HAANETVQL 88
          HA NE  QL
Sbjct: 84 HATNEVAQL 92

[Close]

BLAST of Carg20179 vs. ExPASy Swiss-Prot
Match: Q9Y5U8 (Mitochondrial pyruvate carrier 1 OS=Homo sapiens OX=9606 GN=MPC1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.2e-18
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 19 TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGC 78
          +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  C
Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 79 HAANETVQL 88
          HA NE  QL
Sbjct: 84 HATNEVAQL 92

[Close]

BLAST of Carg20179 vs. ExPASy Swiss-Prot
Match: O74847 (Probable mitochondrial pyruvate carrier 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mpc1 PE=3 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 7.2e-18
Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 5   RAFRAFLNSPVGPK---TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSG 64
           R F  +L SP   K   +THFWGP +NFG  +A + D+KK    ISG+MT  L +YS   
Sbjct: 17  RRFITWLKSPDFRKYLCSTHFWGPLSNFGIPIAAILDLKKDPRLISGRMTGALILYSSVF 76

Query: 65  MRFGYMVRPRNYLLMGCHAANETVQ 87
           MR+ +MV PRNYLL+GCHA N TVQ
Sbjct: 77  MRYAWMVSPRNYLLLGCHAFNTTVQ 101

[Close]

BLAST of Carg20179 vs. ExPASy Swiss-Prot
Match: P63030 (Mitochondrial pyruvate carrier 1 OS=Mus musculus OX=10090 GN=Mpc1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 19  TTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYMVRPRNYLLMGC 78
           +THFWGP AN+G  +A + D+KK  + ISG+MT  LC YSL+ MRF Y V+PRN+LL  C
Sbjct: 24  STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83

Query: 79  HAANETVQLY---LLSRWAMGRRKS 101
           H  NE  QL     L  + M +R S
Sbjct: 84  HVTNEVAQLIQGGRLINYEMSKRPS 108

[Close]

BLAST of Carg20179 vs. ExPASy TrEMBL
Match: A0A6J1F4M1 (Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111440824 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 6.5e-54
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60
           MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS
Sbjct: 1   MSSFRAFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLS 60

Query: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSNE
Sbjct: 61  GMRFGYMVRPRNYLLMGCHAANETVQLYLLSRWAMGTRKSVNYSNE 106

[Close]

BLAST of Carg20179 vs. ExPASy TrEMBL
Match: A0A6J1IG44 (Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111472570 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.3e-50
Identity = 97/101 (96.04%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISG+MTAVLC+YSLSGMRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGRMTAVLCLYSLSGMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANETVQLYLLSRWAMG RKSVNYSNE
Sbjct: 63  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGTRKSVNYSNE 103

[Close]

BLAST of Carg20179 vs. ExPASy TrEMBL
Match: A0A5A7UW28 (Mitochondrial pyruvate carrier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00710 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPVANFGFVAAGLADVKKPADMISGRMTAVLCVYSLLCMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSNE
Sbjct: 63  YMVRPRNYLLMGCHAANESVQLYLLSRWAMGQRKTVDYSNE 103

[Close]

BLAST of Carg20179 vs. ExPASy TrEMBL
Match: A0A1S3CLN5 (Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103502337 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-46
Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MTAVLCVYSL  MRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPVANFGFVAAGLADVKKPADMISGRMTAVLCVYSLLCMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANE+VQLYLLSRWAMG+RK+V+YSNE
Sbjct: 63  YMVRPRNYLLMGCHAANESVQLYLLSRWAMGQRKTVDYSNE 103

[Close]

BLAST of Carg20179 vs. ExPASy TrEMBL
Match: A0A0A0LP00 (Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G002670 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 4.2e-45
Identity = 88/101 (87.13%), Postives = 95/101 (94.06%), Query Frame = 0


Query: 6   AFRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFG 65
           +FRAFLNSPVGPKTTHFWGP ANFGFV AGLADVKKPAD ISG+MT VLCVYSL  MRFG
Sbjct: 3   SFRAFLNSPVGPKTTHFWGPVANFGFVAAGLADVKKPADMISGRMTGVLCVYSLLCMRFG 62

Query: 66  YMVRPRNYLLMGCHAANETVQLYLLSRWAMGRRKSVNYSNE 107
           YMVRPRNYLLMGCHAANE+VQLYLLSRWA+G+RK+V+YSNE
Sbjct: 63  YMVRPRNYLLMGCHAANESVQLYLLSRWALGQRKTVDYSNE 103

[Close]

BLAST of Carg20179 vs. TAIR 10
Match: AT5G20090.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-34
Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 7  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGY 66
          F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +
Sbjct: 6  FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRFAW 65

Query: 67 MVRPRNYLLMGCHAANETVQLYLLSRWA 95
          MV+PRNYLL+ CHA+NETVQLY LSRWA
Sbjct: 66 MVQPRNYLLLACHASNETVQLYQLSRWA 93

[Close]

BLAST of Carg20179 vs. TAIR 10
Match: AT5G20090.2 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-34
Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 7  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGY 66
          F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +
Sbjct: 6  FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRFAW 65

Query: 67 MVRPRNYLLMGCHAANETVQLYLLSRWA 95
          MV+PRNYLL+ CHA+NETVQLY LSRWA
Sbjct: 66 MVQPRNYLLLACHASNETVQLYQLSRWA 93

[Close]

BLAST of Carg20179 vs. TAIR 10
Match: AT5G20090.3 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-34
Identity = 62/88 (70.45%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 7  FRAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGY 66
          F+AFLNSP+GPKTTHFWGP AN+GFV AGL D++KP + ISG M++ +CVYS   MRF +
Sbjct: 6  FQAFLNSPIGPKTTHFWGPIANWGFVAAGLVDMQKPPEMISGNMSSAMCVYSALFMRFAW 65

Query: 67 MVRPRNYLLMGCHAANETVQLYLLSRWA 95
          MV+PRNYLL+ CHA+NETVQLY LSRWA
Sbjct: 66 MVQPRNYLLLACHASNETVQLYQLSRWA 93

[Close]

BLAST of Carg20179 vs. TAIR 10
Match: AT4G22310.1 (Uncharacterised protein family (UPF0041) )

HSP 1 Score: 61.2 bits (147), Expect = 5.7e-10
Identity = 27/85 (31.76%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 8  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYM 67
          +A  N P GPKT HFW P   +G  +A +AD  KP +K+S      +    +   R+  +
Sbjct: 7  QAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTCTGVIWSRYSMV 66

Query: 68 VRPRNYLLMGCHAANETVQLYLLSR 93
          + P+N+ L   + A     +Y L+R
Sbjct: 67 INPKNWNLFSVNVAMAGTGIYQLAR 91

[Close]

BLAST of Carg20179 vs. TAIR 10
Match: AT4G05590.1 (CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0041) (TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-09
Identity = 27/85 (31.76%), Postives = 42/85 (49.41%), Query Frame = 0


Query: 8  RAFLNSPVGPKTTHFWGPAANFGFVVAGLADVKKPADKISGKMTAVLCVYSLSGMRFGYM 67
          +A  N P GPKT HFW P   +G  +A +AD +KP + +S     V+    L   R+  +
Sbjct: 7  QALWNHPAGPKTIHFWAPTFKWGISIANIADFQKPPETLSYPQQIVITGTGLVWSRYSTV 66

Query: 68 VRPRNYLLMGCHAANETVQLYLLSR 93
          + P+N+ L           +Y L+R
Sbjct: 67 ITPKNWNLFSVSLGMAVTGIYQLTR 91

The following BLAST results are available for this feature:

BLAST of Carg20179 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587422.1	2.7e-54	100.00	Mitochondrial pyruvate carrier 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022933393.1	1.3e-53	99.06	mitochondrial pyruvate carrier 1-like [Cucurbita moschata] >XP_022933394.1 mitoc...	[more]
XP_023531564.1	6.9e-50	97.03	mitochondrial pyruvate carrier 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022973945.1	9.0e-50	96.04	mitochondrial pyruvate carrier 1-like [Cucurbita maxima] >XP_022973954.1 mitocho...	[more]
XP_008464463.1	1.3e-45	89.11	PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo] >KAA0057785.1 mi...	[more]

BLAST of Carg20179 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q949R9	2.7e-33	70.45	Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana OX=3702 GN=MPC1 PE=3 SV...	[more]
Q3ZCG2	4.2e-18	57.97	Mitochondrial pyruvate carrier 1 OS=Bos taurus OX=9913 GN=MPC1 PE=1 SV=1	[more]
Q9Y5U8	4.2e-18	57.97	Mitochondrial pyruvate carrier 1 OS=Homo sapiens OX=9606 GN=MPC1 PE=1 SV=1	[more]
O74847	7.2e-18	52.94	Probable mitochondrial pyruvate carrier 1 OS=Schizosaccharomyces pombe (strain 9...	[more]
P63030	1.2e-17	50.59	Mitochondrial pyruvate carrier 1 OS=Mus musculus OX=10090 GN=Mpc1 PE=1 SV=1	[more]

BLAST of Carg20179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4M1	6.5e-54	99.06	Mitochondrial pyruvate carrier OS=Cucurbita moschata OX=3662 GN=LOC111440824 PE=...	[more]
A0A6J1IG44	4.3e-50	96.04	Mitochondrial pyruvate carrier OS=Cucurbita maxima OX=3661 GN=LOC111472570 PE=3 ...	[more]
A0A5A7UW28	6.5e-46	89.11	Mitochondrial pyruvate carrier OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CLN5	6.5e-46	89.11	Mitochondrial pyruvate carrier OS=Cucumis melo OX=3656 GN=LOC103502337 PE=3 SV=1	[more]
A0A0A0LP00	4.2e-45	87.13	Mitochondrial pyruvate carrier OS=Cucumis sativus OX=3659 GN=Csa_1G002670 PE=3 S...	[more]

BLAST of Carg20179 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20090.1	1.9e-34	70.45	Uncharacterised protein family (UPF0041)	[more]
AT5G20090.2	1.9e-34	70.45	Uncharacterised protein family (UPF0041)	[more]
AT5G20090.3	1.9e-34	70.45	Uncharacterised protein family (UPF0041)	[more]
AT4G22310.1	5.7e-10	31.76	Uncharacterised protein family (UPF0041)	[more]
AT4G05590.1	2.2e-09	31.76	CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0041 (InterPro:IPR...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005336	Mitochondrial pyruvate carrier	PFAM	PF03650	MPC	coord: 7..99 e-value: 2.3E-31 score: 108.2
None	No IPR available	PANTHER	PTHR14154	UPF0041 BRAIN PROTEIN 44-RELATED	coord: 5..96
None	No IPR available	PANTHER	PTHR14154:SF88	MITOCHONDRIAL PYRUVATE CARRIER	coord: 5..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20179-RA	Carg20179-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006850	mitochondrial pyruvate transmembrane transport
cellular_component	GO:0031305	integral component of mitochondrial inner membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0050833	pyruvate transmembrane transporter activity