Carg20169 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20169
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Snurportin-1
Location	Carg_Chr11: 164847 .. 170251 (-)
RNA-Seq Expression	Carg20169
Synteny	Carg20169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACCGCACATTCATATTTCGAACCAAAACCGAATTGCGCGAAGATGGCACCGCATGACATTCGCCGTCCTCACAAACGCCCCGCGATCTCCGACCAGCAGAAGCGGCGGGAGCTTTCTTTACAACGGCAACAGCAGAATCGTCGCGACGCTCAGCAACAAGCACGTTCCTTAGCCTCCACGCTCCTCTCCCTCTCTTCCACGTTCAACGAGCCTAGTACCTCTGAGCCGGTGTTGGAGGTTGAGCTAAATGAACTCGATTCCGAAACGGAATGCTCCCCGGTGCTTAGATCGCAGAGTGAATTTAACGAGCCTTCTCTGAAGGAGTTCGATGTTCGCCAGGCTTCGAAGCTCAAAGGTTCAGAGGCTCGTAAGTGGTTTTCGAGGCAACTGTTCCTTCCTGAATGGATGATAGATGTTCCTGATCGACTTAGCGAAGACTGGTTATAATTCCTTCCATTTCTCAGTTACTAGTATTCAGTTAACTATTTATGTTTGCGTTTTCTTCAACTACTACTCGGACTTAGATCTTGTTCCTTTTTACTCGACACATCATCTTATCATCGTTGCCTTTCTATTAGTCTTGCACTCTCTGATTTTTTCTCCTAGTCGCGTGTTCGCATTCAAATTCAATTGTATTCGGTTGCCTTTTTCTCATTCACGTCTCGTGCTTGGCTAATTGAAAGGCGCCACCGAAATTTGGACGATACTTCTCGCTAACTGTCTTATTCTGATGTCAATAAGTATTCTGAAAAGGAAAAAGAGAGAGAGATTATCTTCATCTTTCTGTAAATTTGCATGGAATGATCGAAGGTGAGAGTGACGTTTCTGCGATGCTTTGGATTCTTGTAGGTACGTATTTGCAAGGCCTTCCGGGAAACGGTGCTTTGTTGTTTCTTCCAATGGCACAACTATCAGTAGGCTACGAAATGGATCAATTCTGCATCGTTTTCCTTCTGCTCTACCCAACGGAGCAAGGAGAAGAGATGCCTCTGGATCCGGTCAATCATATTCTATCCTGGATTGTATATTTCATGAAGTAAGTTTCTCATATTTCTTATGCCTTTCTGTCGGCCAAATTTTTTACTGACAAGTAGAAGATCGAATGTCATGCAGATGGATCAAACTTACTACGTCATTGATATGATTTGTTGGCGAGGATATTCTCTTTACGATTGCACAGCCGAGTTTCGGTTCTTCTGGCTCAATTCCAAGCTTGTTGAATCTGGTGCTTCTGAGCCACCTTCATACTATCACAAATATAAATTCAGCCTTGTTCCTGTATATACGTGCGATCAAAATGGTTTTTATGCTGCTTATACTGGAGCGGCACCTTATATCAAGGATGGCCTATTATTTTACAACAAGTAAGGTTTACCATCAAGAAAGGATTTAAGACTTTGAATTCTCCTCCTCCTTTTACACGTGGATTTATTTTGAATTTATTTCACATGTTATTTTTCATTTAGTTGAGAACCTCTGTTGTCTCTTATTGAAATATTATGAACAACGTGCAGAACACTCCTTATGCATCTGCAGAGTTATATGTTTTTAACAATTTTGATGTTATAATCTCAATATATTCATGCTTGATAATTAATATGCACTGTGCGTCTCATTAAGTTCTTTCTTTCATTTCATGAATTTGTATTCTTACAACTTATATCTTCGTTGATCTTGTATTAAGAAGTTACGTTGTGTTAGGCATTCCCATTACCAGCCAGGAAATACACCACTTGCATTGGTCTGGAAGGATGAGAGTTGCAGTCGATATGTTATTGACACAGATAGTAATGGACAAGTCCCAAGCCAACAGCAGGCACTTTTTCTCTACACTTCCTGTTCCTCTTTTTAAAACAAATGAATTATATGACTATAATTCTTTTCTTTTTTCCCTATCTTTTTCTTATTTTACAAATTCTGCTGCCACAACGCAATTGATGAAAACGATCCATTTTTGTGATCCATGCCATGGACCTACTCTCTTTTCTCATATAGTTTATAATGCTTCTTCTGCTTTGTTTCAATGATCAGGTGGTTTTGGAGCTACAAGATGATGGAAAGGTGACTACATCAGATGATCCTCCAGTGGACTTTGGATGCTTAGATGGCAATTTTATCGAAAAGGTTTTTGTTCTAAATTTAACCCTTTCTACGGTGTCATTAGTTTTGAATTTATTTTGTGCATTACATGTTGTTTACTTAGACTACATTTTGCATGGAAATCTGGTCTGTGATTTTCATTTCTTTTTATTTTCTCTTTTGTGCCTTTGTATGTCTGGTGTGTAATTTGGCGTGGTGCCTATTTCACCATATTGTAGTCTTGAAGTTGTTATTTGGGATTCTGTTAACTGAACAAGCTGTTGCTTGATATCTGCATCTTCTAACAATTAGATCTTTTTGTTTGGTACAGGAAAAGAAAAAAGTAATTAGCTAGTTAGCTCCTGTGATATGAGGTGGTTTGCATGACATTGATTTTTTGAGAAATAATCTCGATGGTTTTGATTAACAGGTAATATTAAAGAGCATGTTAACAGGAATACTGACGTGCCATAAAGCCTGTTACTAAATTATAAACTAACCATTTACCAATATTGCCTTCAGTTTACGGGAATTGTGGCAGGAATTGTGGCCCTTTTTACCCACCTAGTGAGCATTAACGACCTTTACCCCCACTTAGAGAGAATTGACTCTTTTTACCTCATCTCGTGAGAATTATAGTAGACAGGATAAGTTGTAGTAGTACTCTAGACCTGTTTCAAGGGTTTATACAATCATTCATTTCCAAAACTACTTTTTAGTACTAGCCTATTGACCTTTGTTCTAGGGTGGTAAGATAGAGACTCGGCCTGTTTAAAGTTTGAGAATATGTGGTTACAAACTTACAACTTACAACACTCTTCCTTTAAGGAGTTTCTCTCTCTCAAACTTACAACTCTCAACGCTCTTCCTTTAACTCTAGGTTTCCTCTATGGTGGTTTGAGAATTGTAAGTCTCTGTCTCCCATGGTAGTTGCTCAAAGTTTTTTACTAATTTTTAGGGAGCATCTAGTGGACACAACTATAAAGAAAACTTGTGCTTATCTTTTTATTTTTTATTTTCTTGTAAGAAGCCAAGCGTGTCAGCTATCGAGGATTTTAGATCCACAACTTCATTCTCTGTAAACCATTCCCAAGACCTGGTCCAAGAGGTCATGGAAAGTCGTATCTCATACTATTTATGCTAACTGGGGCAGTTTAATGGTTGGGGACAAAATTCTTGACGAGGTTCATCAGTACGAGAAGAAATCCCTTGTGGAGATCAGTTTCGAAAAGGTTTATGATCATTCTGGTTTTGGTATTTTTGGTATTTTTGGGGACGGCTTGGCTATAATTGGAGAATTTGGTCTGTAAATTGCTTGTGTGATATCAGTTCTGGCATGGTTTTGAGAGAATTCTTTGCCATAGAGGTAACGAACAAGTGATGTTATGTTCTCTTTCCTTTTAATTGAGGTGATTGACGTCCTTAGCAGAAATATATGTAAGGTGATGGATAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATAAGAGGTGATGGGTAGTTATTTAATGGAGGGCTTTGTTGTGAGGAGAGAGAATGTTTTCAAACATCATTTGTAGCCGTGGATGGCACCTTTTTTTTTATGCAGGGAAGGGAGATTCTTTTCTTAATTTGAATTGAGTTCTTCATGTCTCTGAGACTACTACGTGCTTAAATATTAATAGGAATAAACGTTCTTAGTTATGCGACTCTAATTGATTGTGAATAAGTTTAGTTAGTAAGTTGTAAATGGTGGCTTGGTGGTCTCTTTGCTATCCATCTTATATTTGGGTCTTCCTTTGTGCTATATCCTGGAGCGTTTCTGTTTGGTGAAAGAGAGTCAAAGATATCTTTCATATTGAATAAGAGCATACTTTTTAAAAGGGTACCTTTTCTTGAATTAGGCTATTTTGAGTGGAACCTTCTTTATTTCCTCTTCCTCATCAAGATTCCTTCTTCCTAACCAAGTTGTGAATAAGTCTTCCACTTTAGTTCTTTGTCCGTGGTGGTGTGTTAAGCGCAAACAGTCACTAAGTGATTAGAATCACATCTCCTGGTAATTCTACTCTCTTTTTTGATATTTTGGTTCAGGTTCTTAGCGACTTTTGTAGTGGTCGTGATCTTCTGGCTTGTCATTTTATGGAGTTCTTTTTGCATCCTCATGTTTGATTTTTTTTTTTTAAATTTAAAAAAAAAAAAAAGAAAAAAAAAAGAAAAGAACTCTTTAGCTAGCTTTTTTTTTTTTTTTTTCCATTGGTTGGAAAGGATCAAAAGCAAGGATTTTGGGGGAGATTTGGGGTTAACTCACTTCAAGCTTCTTTTAAGTTAATGCTACCGGAGTTTTTTCTCAATAATTTTTTTTTTTAGAATTATAAAAATCTTCTGTTTTTATATGTTACCAGCATTTGAAGTTCCTTCTTGTCGGCAAATATCTAAACTGACATTTCGATAAAATTCAGTCAGGGTTGTCTTCAGGTAATCTCTTGCGATTTGCAATCGGGGATGGTGGGCTGACCATTGTTGACGGGAGGATTCAGGGGGCAGATTTACAATATGTTGGCAAGGTCAATGGGGCTCGAGCCTTTGCAGATAGTTACTCCAAGGTTAGAGAAATTATGCTAAATAGCGAAGTTAAAGGGTCAAATCAAATTTAATATAAAAAAGTTATGAGAATATAAATAATTAACTAATTAAAAAGGTTATGGAGGGCTAACTAATTTGTTTAAATTATATTCTCATAACTCCAAGGTTAATTGACATTTATTTGATTATTTTTATTTGTTTTTTCTGCCAAGACCTTAAAGGAAACTAACTGTGGCAGGTTATGTTTCAATATGCGGCTCGCCATTCGCCTTTAAAAGTAGATGATCTATTAACGTCCATCAATTCATCAAATGATCACCGAGAAGATGGTGATACTGAAATGGATGGATAGTGGTCGATAGTCCAAAGATTTCTTTATTGCTAGTATGGTCATTATTTATGCCTCTGGTTGTTATGCTGCCTACTATCTTATGAAGGCTTTTGTCAAACTCCTTTCGTCCCTTCCTTGATACAGCTTGCGGAGACCGGGGCAGCATTCTGTTAACCATGTCGAGAAATACTATTTCCATATTTGTATCTGTAGGAACTCATGGTATTCAACCCCCCGGTTCAAGTTCAGAAGTCGGTGCATCTCTCGCAGGCCAATCACTCCGACTCCTTTTCGAGGTAAAATTCTTGACATTACGATTTTCATCAGATTTAATATATAATATTGTACGTTATGAGAAATGTGAAACGATCCAGTTTTTATGCTTAACCCAAATAGAGTTTAATGTTTAAATCACCTATTTTCTATCTCCA

mRNA sequence

AGACCGCACATTCATATTTCGAACCAAAACCGAATTGCGCGAAGATGGCACCGCATGACATTCGCCGTCCTCACAAACGCCCCGCGATCTCCGACCAGCAGAAGCGGCGGGAGCTTTCTTTACAACGGCAACAGCAGAATCGTCGCGACGCTCAGCAACAAGCACGTTCCTTAGCCTCCACGCTCCTCTCCCTCTCTTCCACGTTCAACGAGCCTAGTACCTCTGAGCCGGTGTTGGAGGTTGAGCTAAATGAACTCGATTCCGAAACGGAATGCTCCCCGGTGCTTAGATCGCAGAGTGAATTTAACGAGCCTTCTCTGAAGGAGTTCGATGTTCGCCAGGCTTCGAAGCTCAAAGGTTCAGAGGCTCGTAAGTGGTTTTCGAGGCAACTGTTCCTTCCTGAATGGATGATAGATGTTCCTGATCGACTTAGCGAAGACTGGTACGTATTTGCAAGGCCTTCCGGGAAACGGTGCTTTGTTGTTTCTTCCAATGGCACAACTATCAGTAGGCTACGAAATGGATCAATTCTGCATCGTTTTCCTTCTGCTCTACCCAACGGAGCAAGGAGAAGAGATGCCTCTGGATCCGGTCAATCATATTCTATCCTGGATTGTATATTTCATGAAATGGATCAAACTTACTACGTCATTGATATGATTTGTTGGCGAGGATATTCTCTTTACGATTGCACAGCCGAGTTTCGGTTCTTCTGGCTCAATTCCAAGCTTGTTGAATCTGGTGCTTCTGAGCCACCTTCATACTATCACAAATATAAATTCAGCCTTGTTCCTGTATATACGTGCGATCAAAATGGTTTTTATGCTGCTTATACTGGAGCGGCACCTTATATCAAGGATGGCCTATTATTTTACAACAAGCATTCCCATTACCAGCCAGGAAATACACCACTTGCATTGGTCTGGAAGGATGAGAGTTGCAGTCGATATGTTATTGACACAGATAGTAATGGACAAGTCCCAAGCCAACAGCAGGTGGTTTTGGAGCTACAAGATGATGGAAAGGTGACTACATCAGATGATCCTCCAGTGGACTTTGGATGCTTAGATGGCAATTTTATCGAAAAGTCAGGGTTGTCTTCAGGTAATCTCTTGCGATTTGCAATCGGGGATGGTGGGCTGACCATTGTTGACGGGAGGATTCAGGGGGCAGATTTACAATATGTTGGCAAGGTCAATGGGGCTCGAGCCTTTGCAGATAGTTACTCCAAGGTTATGTTTCAATATGCGGCTCGCCATTCGCCTTTAAAAGTAGATGATCTATTAACGTCCATCAATTCATCAAATGATCACCGAGAAGATGGTGATACTGAAATGGATGGATAGTGGTCGATAGTCCAAAGATTTCTTTATTGCTACTTGCGGAGACCGGGGCAGCATTCTGTTAACCATGTCGAGAAATACTATTTCCATATTTGTATCTGTAGGAACTCATGGTATTCAACCCCCCGGTTCAAGTTCAGAAGTCGGTGCATCTCTCGCAGGCCAATCACTCCGACTCCTTTTCGAGGTAAAATTCTTGACATTACGATTTTCATCAGATTTAATATATAATATTGTACGTTATGAGAAATGTGAAACGATCCAGTTTTTATGCTTAACCCAAATAGAGTTTAATGTTTAAATCACCTATTTTCTATCTCCA

Coding sequence (CDS)

ATGGCACCGCATGACATTCGCCGTCCTCACAAACGCCCCGCGATCTCCGACCAGCAGAAGCGGCGGGAGCTTTCTTTACAACGGCAACAGCAGAATCGTCGCGACGCTCAGCAACAAGCACGTTCCTTAGCCTCCACGCTCCTCTCCCTCTCTTCCACGTTCAACGAGCCTAGTACCTCTGAGCCGGTGTTGGAGGTTGAGCTAAATGAACTCGATTCCGAAACGGAATGCTCCCCGGTGCTTAGATCGCAGAGTGAATTTAACGAGCCTTCTCTGAAGGAGTTCGATGTTCGCCAGGCTTCGAAGCTCAAAGGTTCAGAGGCTCGTAAGTGGTTTTCGAGGCAACTGTTCCTTCCTGAATGGATGATAGATGTTCCTGATCGACTTAGCGAAGACTGGTACGTATTTGCAAGGCCTTCCGGGAAACGGTGCTTTGTTGTTTCTTCCAATGGCACAACTATCAGTAGGCTACGAAATGGATCAATTCTGCATCGTTTTCCTTCTGCTCTACCCAACGGAGCAAGGAGAAGAGATGCCTCTGGATCCGGTCAATCATATTCTATCCTGGATTGTATATTTCATGAAATGGATCAAACTTACTACGTCATTGATATGATTTGTTGGCGAGGATATTCTCTTTACGATTGCACAGCCGAGTTTCGGTTCTTCTGGCTCAATTCCAAGCTTGTTGAATCTGGTGCTTCTGAGCCACCTTCATACTATCACAAATATAAATTCAGCCTTGTTCCTGTATATACGTGCGATCAAAATGGTTTTTATGCTGCTTATACTGGAGCGGCACCTTATATCAAGGATGGCCTATTATTTTACAACAAGCATTCCCATTACCAGCCAGGAAATACACCACTTGCATTGGTCTGGAAGGATGAGAGTTGCAGTCGATATGTTATTGACACAGATAGTAATGGACAAGTCCCAAGCCAACAGCAGGTGGTTTTGGAGCTACAAGATGATGGAAAGGTGACTACATCAGATGATCCTCCAGTGGACTTTGGATGCTTAGATGGCAATTTTATCGAAAAGTCAGGGTTGTCTTCAGGTAATCTCTTGCGATTTGCAATCGGGGATGGTGGGCTGACCATTGTTGACGGGAGGATTCAGGGGGCAGATTTACAATATGTTGGCAAGGTCAATGGGGCTCGAGCCTTTGCAGATAGTTACTCCAAGGTTATGTTTCAATATGCGGCTCGCCATTCGCCTTTAAAAGTAGATGATCTATTAACGTCCATCAATTCATCAAATGATCACCGAGAAGATGGTGATACTGAAATGGATGGATAG

Protein sequence

MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTSEPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPEWMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDASGSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSYYHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCSRYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFAIGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSSNDHREDGDTEMDG

Homology

[Close]

BLAST of Carg20169 vs. NCBI nr
Match: KAG7021395.1 (Snurportin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 872.8 bits (2254), Expect = 1.2e-249
Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE
Sbjct: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. NCBI nr
Match: XP_022928272.1 (snurportin-1 [Cucurbita moschata])

HSP 1 Score: 866.3 bits (2237), Expect = 1.1e-247
Identity = 430/433 (99.31%), Postives = 431/433 (99.54%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPP+DFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPLDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. NCBI nr
Match: XP_023529237.1 (snurportin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 863.2 bits (2229), Expect = 9.4e-247
Identity = 429/433 (99.08%), Postives = 430/433 (99.31%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDS+TECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSQTECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSN QVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNRQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. NCBI nr
Match: XP_023001378.1 (snurportin-1 [Cucurbita maxima])

HSP 1 Score: 860.9 bits (2223), Expect = 4.7e-246
Identity = 428/433 (98.85%), Postives = 428/433 (98.85%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRE SLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRREFSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGA EPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGACEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYT AAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTRAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. NCBI nr
Match: KAG6587412.1 (Snurportin-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-234
Identity = 408/412 (99.03%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDD 413
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLK  D
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKSKD 412

[Close]

BLAST of Carg20169 vs. ExPASy Swiss-Prot
Match: Q5ZI43 (Snurportin-1 OS=Gallus gallus OX=9031 GN=SNUPN PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.9e-42
Identity = 80/186 (43.01%), Postives = 115/186 (61.83%), Query Frame = 0


Query: 105 GSEARKWFSRQLFLPEWMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILH 164
           G    K ++ QL L EW++DVP  L ++W V   P GKR  VV+S G+T +  ++G  ++
Sbjct: 93  GRRLPKRYANQLMLSEWLVDVPVDLEQEWIVVVCPVGKRALVVASRGSTAAYTKSGFCVN 152

Query: 165 RFPSALPNGARRRDASGSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFW 224
           RFPS LP G R    + + + Y ILDCI++E +QTYY++D++CWRG+ +YDC  +FRFFW
Sbjct: 153 RFPSLLPGGNRHN--TMNEKVYCILDCIYNEAEQTYYILDVMCWRGHPVYDCQTDFRFFW 212

Query: 225 LNSKLVESGASEPPSYYHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQ 284
           L+SK+ E       S  + YKF  +  + C         T   P+  DGLLFY+K +HY 
Sbjct: 213 LSSKIQEEEGLGEKSRINPYKFVGLQNFPCTSESLCEVLTTNFPFEVDGLLFYHKQTHYT 272

Query: 285 PGNTPL 291
           PG+TPL
Sbjct: 273 PGSTPL 276

[Close]

BLAST of Carg20169 vs. ExPASy Swiss-Prot
Match: O95149 (Snurportin-1 OS=Homo sapiens OX=9606 GN=SNUPN PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-39
Identity = 101/290 (34.83%), Postives = 151/290 (52.07%), Query Frame = 0


Query: 2   APHDIRRPHKRPAIS-DQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 61
           APH     +K    S +Q +RR   L+ Q+  R D    AR LA                
Sbjct: 23  APHPRLSQYKSKYSSLEQSERRRRLLELQKSKRLDYVNHARRLA---------------- 82

Query: 62  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 121
               E +   ++SE E           N+   +E D+    KL      K ++ QL L E
Sbjct: 83  ----EDDWTGMESEEE-----------NKKDDEEMDIDTVKKLP-----KHYANQLMLSE 142

Query: 122 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 181
           W+IDVP  L ++W V   P GKR  +V+S G+T +  ++G  ++RF S LP G RR   +
Sbjct: 143 WLIDVPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRR---N 202

Query: 182 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 241
            + + Y+ILDCI++E++QTYYV+D++CWRG+  YDC  +FRF+W++SKL E       + 
Sbjct: 203 STAKDYTILDCIYNEVNQTYYVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLGEKTK 262

Query: 242 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPL 291
            + +KF  +  + C         +   P+  DGLLFY+K +HY PG+TPL
Sbjct: 263 LNPFKFVGLKNFPCTPESLCDVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 273

[Close]

BLAST of Carg20169 vs. ExPASy Swiss-Prot
Match: Q80W37 (Snurportin-1 OS=Mus musculus OX=10090 GN=Snupn PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.1e-39
Identity = 102/290 (35.17%), Postives = 149/290 (51.38%), Query Frame = 0


Query: 2   APHDIRRPHKRPAIS-DQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 61
           APH     +K    S +Q +RR   L+ Q+  R D    AR LA                
Sbjct: 23  APHPRLCQYKSKYSSLEQSERRRQLLELQKSKRLDYVNHARRLAE--------------- 82

Query: 62  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 121
                      D  T     + S  E N+   +E D+  + KL      K ++ QL L E
Sbjct: 83  -----------DDWTG----MESGEEENKKDEEEMDIDPSKKLP-----KRYANQLMLSE 142

Query: 122 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 181
           W+IDVP  L ++W V   P GKR  +V+S G+T +  ++G  ++RF S LP G RR   S
Sbjct: 143 WLIDVPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRN--S 202

Query: 182 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 241
            + + Y+ILDCI+ E++QTYYV+D++CWRG+  YDC  +FRF+W++SKL E       + 
Sbjct: 203 TTAKDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLGEKTK 262

Query: 242 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPL 291
            + +KF  +  + C         +   P+  DGLLFY+K +HY PG+TPL
Sbjct: 263 INPFKFVGLKNFPCTPESLCEVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 275

[Close]

BLAST of Carg20169 vs. ExPASy Swiss-Prot
Match: Q68FP5 (Snurportin-1 OS=Rattus norvegicus OX=10116 GN=Snupn PE=2 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.0e-38
Identity = 102/290 (35.17%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 2   APHDIRRPHKRPAIS-DQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 61
           APH     +K    S +Q +RR   L+ Q+  R D    AR LA                
Sbjct: 23  APHPRLSQYKSKYSSLEQSERRRQLLELQKSKRLDYVNHARRLAE--------------- 82

Query: 62  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 121
                      D  T     + S  E  +   +E D+    KL      K ++ QL L E
Sbjct: 83  -----------DDWTG----MESGEEEKKKDEEEMDLDPVKKLP-----KRYANQLMLSE 142

Query: 122 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 181
           W+IDVP  L ++W V   P GKR  +V+S G+T +  ++G  ++RF S LP G RR   S
Sbjct: 143 WLIDVPSDLGQEWIVVVCPVGKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRN--S 202

Query: 182 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 241
            + + Y+ILDCI+ E++QTYYV+D++CWRG+  YDC  +FRF+W+NSKL E       + 
Sbjct: 203 TTAKDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQTDFRFYWMNSKLPEEEGLGEKTK 262

Query: 242 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPL 291
            + +KF  +  + C         +   P+  DGLLFY+K +HY PG+TPL
Sbjct: 263 INPFKFVGLKNFPCTPESLCKVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 275

[Close]

BLAST of Carg20169 vs. ExPASy Swiss-Prot
Match: Q2TBK8 (Snurportin-1 OS=Bos taurus OX=9913 GN=SNUPN PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.8e-38
Identity = 103/290 (35.52%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 2   APHDIRRPHKRPAIS-DQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 61
           APH     +K    S +Q +RR   L+ Q+  R D    AR LA                
Sbjct: 23  APHPRLSQYKSKYSSLEQSERRRQLLELQKLKRLDYVNHARRLAE--------------- 82

Query: 62  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 121
                      D  T     + S+ E  +   +E DV       G E  K ++ QL L E
Sbjct: 83  -----------DDWTG----MESEEEEEKKDDEEMDVD-----TGKELPKRYANQLMLSE 142

Query: 122 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 181
           W+IDVP  L ++W V   P GKR  +V+S G T +  ++G  ++ FPS LP G RR   S
Sbjct: 143 WLIDVPSDLGQEWIVVVCPVGKRSLIVASQGLTSAYTKSGYCVNTFPSLLPGGNRRN--S 202

Query: 182 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 241
            + + Y+ILDCI+ E++QTYYV+D++CWRG+  YDC  +FRF+WL+SKL E       + 
Sbjct: 203 TTEKDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQTDFRFYWLHSKLPEEEGLGEKTK 262

Query: 242 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPL 291
            + +KF  +  + C         +   P+  DGLLFY+K +HY PG+TPL
Sbjct: 263 RNPFKFVGLKNFPCTPESLCKVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 275

[Close]

BLAST of Carg20169 vs. ExPASy TrEMBL
Match: A0A6J1EJF9 (Snurportin-1 OS=Cucurbita moschata OX=3662 GN=LOC111435150 PE=3 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 5.4e-248
Identity = 430/433 (99.31%), Postives = 431/433 (99.54%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPP+DFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPLDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. ExPASy TrEMBL
Match: A0A6J1KQC3 (Snurportin-1 OS=Cucurbita maxima OX=3661 GN=LOC111495530 PE=3 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 2.3e-246
Identity = 428/433 (98.85%), Postives = 428/433 (98.85%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRE SLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRREFSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           E VLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQL LPE
Sbjct: 61  ESVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGA EPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGACEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVYTCDQNGFYAAYT AAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFSLVPVYTCDQNGFYAAYTRAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA
Sbjct: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420

Query: 421 NDHREDGDTEMDG 434
           NDHREDGDTEMDG
Sbjct: 421 NDHREDGDTEMDG 433

[Close]

BLAST of Carg20169 vs. ExPASy TrEMBL
Match: A0A6J1C4W1 (Snurportin-1 OS=Momordica charantia OX=3673 GN=LOC111007415 PE=3 SV=1)

HSP 1 Score: 781.6 bits (2017), Expect = 1.7e-222
Identity = 389/433 (89.84%), Postives = 409/433 (94.46%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQ ARSLASTLLSLSSTF+EP+TS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQAARSLASTLLSLSSTFHEPTTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           EPVLE+ELNEL+SETE SP L S+ EF+E + KEFDV QASKLKGSEARKWFS+QL LPE
Sbjct: 61  EPVLEIELNELESETEHSPELVSEHEFDEVASKEFDVCQASKLKGSEARKWFSKQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGA++RD S
Sbjct: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGAKKRDVS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVE+GA EPPSY
Sbjct: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVETGACEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKF LVPVYTCDQNG YAAYTGAAPY+KDGLLFYNKHSHYQPGNTPLALVWKDESCS
Sbjct: 241 YHKYKFGLVPVYTCDQNGLYAAYTGAAPYVKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           +YVIDTDSNGQVPSQQQVVLELQ DGKVTTSDDPPV+FGCLDG+FI+KSGLSS NLLRF 
Sbjct: 301 QYVIDTDSNGQVPSQQQVVLELQGDGKVTTSDDPPVEFGCLDGDFIKKSGLSSSNLLRFT 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDGRIQGADL Y+GKVN ARAFADSYSKVMFQ+AARHSPLK+DDLL SINSS
Sbjct: 361 IGDGGLTIVDGRIQGADLHYIGKVNRARAFADSYSKVMFQHAARHSPLKIDDLLASINSS 420

Query: 421 NDHREDGDTEMDG 434
           ND  E  DT+M G
Sbjct: 421 ND-GEVRDTDMVG 432

[Close]

BLAST of Carg20169 vs. ExPASy TrEMBL
Match: A0A5A7URL4 (Snurportin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00570 PE=4 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.2e-216
Identity = 376/433 (86.84%), Postives = 402/433 (92.84%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSS+FNEPSTS
Sbjct: 471 MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSSFNEPSTS 530

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           EPVLE+ELNEL+SETECS  + ++ EFNEP+LKE DVRQASKLK S+ARKWFS+QL LPE
Sbjct: 531 EPVLEIELNELESETECSTEILAEREFNEPALKELDVRQASKLKSSDARKWFSKQLLLPE 590

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRL++DWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGA+ ++AS
Sbjct: 591 WMIDVPDRLTDDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGAKTKNAS 650

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQ+YSILDCIFHE DQTYYVIDMICWRGYSLYDC AEFRFFWLNSKL ESGA EPPSY
Sbjct: 651 GSGQTYSILDCIFHEPDQTYYVIDMICWRGYSLYDCAAEFRFFWLNSKLAESGACEPPSY 710

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVY+CDQNG +AAY G AP++KDGLLFYNKHSHYQPGNTPLALVWKDE+CS
Sbjct: 711 YHKYKFSLVPVYSCDQNGLHAAYAGEAPFVKDGLLFYNKHSHYQPGNTPLALVWKDENCS 770

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           +YVIDTDSNGQVPSQQQ+VLELQ DGKV TSDDPPV FGCLDG+F+ K GLSSGNLLRF 
Sbjct: 771 QYVIDTDSNGQVPSQQQLVLELQSDGKVATSDDPPVYFGCLDGDFLGKLGLSSGNLLRFT 830

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDG+IQGADLQY GKVN ARAFADSYSKVMFQYAAR SPLK+DDLL SINSS
Sbjct: 831 IGDGGLTIVDGKIQGADLQYNGKVNRARAFADSYSKVMFQYAARRSPLKIDDLLASINSS 890

Query: 421 NDHREDGDTEMDG 434
           ND     DTEM G
Sbjct: 891 ND-GGGHDTEMVG 902

[Close]

BLAST of Carg20169 vs. ExPASy TrEMBL
Match: A0A1S4E4Q9 (Snurportin-1 OS=Cucumis melo OX=3656 GN=LOC103502323 PE=3 SV=1)

HSP 1 Score: 760.8 bits (1963), Expect = 3.2e-216
Identity = 376/433 (86.84%), Postives = 402/433 (92.84%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSS+FNEPSTS
Sbjct: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSSFNEPSTS 60

Query: 61  EPVLEVELNELDSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLPE 120
           EPVLE+ELNEL+SETECS  + ++ EFNEP+LKE DVRQASKLK S+ARKWFS+QL LPE
Sbjct: 61  EPVLEIELNELESETECSTEILAEREFNEPALKELDVRQASKLKSSDARKWFSKQLLLPE 120

Query: 121 WMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDAS 180
           WMIDVPDRL++DWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGA+ ++AS
Sbjct: 121 WMIDVPDRLTDDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGAKTKNAS 180

Query: 181 GSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPSY 240
           GSGQ+YSILDCIFHE DQTYYVIDMICWRGYSLYDC AEFRFFWLNSKL ESGA EPPSY
Sbjct: 181 GSGQTYSILDCIFHEPDQTYYVIDMICWRGYSLYDCAAEFRFFWLNSKLAESGACEPPSY 240

Query: 241 YHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESCS 300
           YHKYKFSLVPVY+CDQNG +AAY G AP++KDGLLFYNKHSHYQPGNTPLALVWKDE+CS
Sbjct: 241 YHKYKFSLVPVYSCDQNGLHAAYAGEAPFVKDGLLFYNKHSHYQPGNTPLALVWKDENCS 300

Query: 301 RYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRFA 360
           +YVIDTDSNGQVPSQQQ+VLELQ DGKV TSDDPPV FGCLDG+F+ K GLSSGNLLRF 
Sbjct: 301 QYVIDTDSNGQVPSQQQLVLELQSDGKVATSDDPPVYFGCLDGDFLGKLGLSSGNLLRFT 360

Query: 361 IGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINSS 420
           IGDGGLTIVDG+IQGADLQY GKVN ARAFADSYSKVMFQYAAR SPLK+DDLL SINSS
Sbjct: 361 IGDGGLTIVDGKIQGADLQYNGKVNRARAFADSYSKVMFQYAARRSPLKIDDLLASINSS 420

Query: 421 NDHREDGDTEMDG 434
           ND     DTEM G
Sbjct: 421 ND-GGGHDTEMVG 432

[Close]

BLAST of Carg20169 vs. TAIR 10
Match: AT4G24880.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 588.6 bits (1516), Expect = 4.2e-168
Identity = 286/432 (66.20%), Postives = 349/432 (80.79%), Query Frame = 0


Query: 1   MAPHDIRRPHKRPAISDQQKRRELSLQRQQQNRRDAQQQARSLASTLLSLSSTFNEPSTS 60
           MAPH+IRRP KR  ISDQQKRRELSL RQ Q+R DAQQ+AR+LAS+L+SL S  + P   
Sbjct: 1   MAPHEIRRPFKRRPISDQQKRRELSLIRQTQHRSDAQQRARNLASSLISLQS--SSPDVD 60

Query: 61  EPVLEVELNEL-DSETECSPVLRSQSEFNEPSLKEFDVRQASKLKGSEARKWFSRQLFLP 120
             +L   + EL  +E+E S                FDVRQAS+L+G EARKWF++QL LP
Sbjct: 61  PEILSEAVPELVGTESESS---------------SFDVRQASRLRGPEARKWFAKQLMLP 120

Query: 121 EWMIDVPDRLSEDWYVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSALPNGARRRDA 180
           EWMIDVPD LS+DWYV ARP+GKRCFVVSS+GTT+SR+RNGS LH FPSALP GAR++ A
Sbjct: 121 EWMIDVPDNLSQDWYVLARPAGKRCFVVSSDGTTVSRVRNGSTLHLFPSALPGGARKKGA 180

Query: 181 SGSGQSYSILDCIFHEMDQTYYVIDMICWRGYSLYDCTAEFRFFWLNSKLVESGASEPPS 240
           SG   SYSILDCIFHE DQTYYVIDM+CWRGYSLY+CT+EFRFFWL SKL E+GA +PPS
Sbjct: 181 SGPANSYSILDCIFHESDQTYYVIDMVCWRGYSLYECTSEFRFFWLQSKLAETGACDPPS 240

Query: 241 YYHKYKFSLVPVYTCDQNGFYAAYTGAAPYIKDGLLFYNKHSHYQPGNTPLALVWKDESC 300
            YHK++FS+VP Y CDQ+G ++AYTG+ PY++DGLLFYNKH+HY  GNTPL L+WKDESC
Sbjct: 241 VYHKFRFSVVPFYNCDQSGLHSAYTGSLPYVRDGLLFYNKHAHYHTGNTPLVLIWKDESC 300

Query: 301 SRYVIDTDSNGQVPSQQQVVLELQDDGKVTTSDDPPVDFGCLDGNFIEKSGLSSGNLLRF 360
           S+YVIDTD+NG+VP+QQ +VLELQ++GK+ TSDDPPV F CL+ +F+++SGLSSG+L+RF
Sbjct: 301 SQYVIDTDNNGEVPNQQHIVLELQEEGKLVTSDDPPVPFSCLNADFVKQSGLSSGSLIRF 360

Query: 361 AIGDGGLTIVDGRIQGADLQYVGKVNGARAFADSYSKVMFQYAARHSPLKVDDLLTSINS 420
           AIGDGGL  VDGR + ADLQY+G  N ARAFADSYSK+MFQY ARHSPLKV+DL ++I+ 
Sbjct: 361 AIGDGGLKCVDGRFEKADLQYIGVSNRARAFADSYSKIMFQYMARHSPLKVEDLASTISP 415

Query: 421 SNDHREDGDTEM 432
            +   +  + EM
Sbjct: 421 EDQQDKPPEVEM 415

The following BLAST results are available for this feature:

BLAST of Carg20169 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021395.1	1.2e-249	100.00	Snurportin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022928272.1	1.1e-247	99.31	snurportin-1 [Cucurbita moschata]	[more]
XP_023529237.1	9.4e-247	99.08	snurportin-1 [Cucurbita pepo subsp. pepo]	[more]
XP_023001378.1	4.7e-246	98.85	snurportin-1 [Cucurbita maxima]	[more]
KAG6587412.1	1.8e-234	99.03	Snurportin-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg20169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5ZI43	5.9e-42	43.01	Snurportin-1 OS=Gallus gallus OX=9031 GN=SNUPN PE=2 SV=1	[more]
O95149	2.1e-39	34.83	Snurportin-1 OS=Homo sapiens OX=9606 GN=SNUPN PE=1 SV=1	[more]
Q80W37	6.1e-39	35.17	Snurportin-1 OS=Mus musculus OX=10090 GN=Snupn PE=2 SV=1	[more]
Q68FP5	1.0e-38	35.17	Snurportin-1 OS=Rattus norvegicus OX=10116 GN=Snupn PE=2 SV=1	[more]
Q2TBK8	1.8e-38	35.52	Snurportin-1 OS=Bos taurus OX=9913 GN=SNUPN PE=2 SV=1	[more]

BLAST of Carg20169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJF9	5.4e-248	99.31	Snurportin-1 OS=Cucurbita moschata OX=3662 GN=LOC111435150 PE=3 SV=1	[more]
A0A6J1KQC3	2.3e-246	98.85	Snurportin-1 OS=Cucurbita maxima OX=3661 GN=LOC111495530 PE=3 SV=1	[more]
A0A6J1C4W1	1.7e-222	89.84	Snurportin-1 OS=Momordica charantia OX=3673 GN=LOC111007415 PE=3 SV=1	[more]
A0A5A7URL4	3.2e-216	86.84	Snurportin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00570 P...	[more]
A0A1S4E4Q9	3.2e-216	86.84	Snurportin-1 OS=Cucumis melo OX=3656 GN=LOC103502323 PE=3 SV=1	[more]

BLAST of Carg20169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24880.1	4.2e-168	66.20	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 26..46
None	No IPR available	GENE3D	3.30.470.30	DNA ligase/mRNA capping enzyme	coord: 3..321 e-value: 3.6E-95 score: 320.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	CDD	cd09232	Snurportin-1_C	coord: 111..297 e-value: 2.18702E-92 score: 274.9
None	No IPR available	SUPERFAMILY	56091	DNA ligase/mRNA capping enzyme, catalytic domain	coord: 112..295
IPR017336	Snurportin-1	PANTHER	PTHR13403	SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1	coord: 1..432

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20169-RA	Carg20169-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061015	snRNA import into nucleus
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding