Carg20153 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20153
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Procollagen-proline 4-dioxygenase
Location	Carg_Chr14: 12358826 .. 12362194 (-)
RNA-Seq Expression	Carg20153
Synteny	Carg20153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGAAACTTTTTGCTATTTTCTTCTGCTTCGTTCTCTTTCTCTACTGATCCGATTCAGTTCATGGAGAAATTTTGCAGTTTCAATCTGCTGTTTTTCTTCTCATTATCGATTTCGTTGCTTCTCCGGCGAGCTTCAAGCTCCTATGCAGGTTCCGCTAGCTCAATCGTCAATCCTGCTAAAGTAAAGCAGATTTCATGGAATCCTCGGTACTTCAATTTCTTGCCGTTCTGCTTCTTCTTTTCCTTGTTGTAGTTTCTAAGTTTTGATGATCTATTTCTTCGTTTGATGTTTGCGGTTCGATGTTTCCGTTTCAATTTGAATGATTATATAGGGCGTTTGTGTATGAAGGTTTTCTCACGGACTTAGAATCCGATCATCTCATCTCGATTGTGAGTAGAATTAGAATTTATTCGTTTTTCATTTGTGATACCGCAGTAGTACGCGATTTTTGTTTTGGTTAATTTTTGTTCTGTTTAAATTAGGCTAAAGCTGAGTTGAAGAGATCTGCTGTTGCGGATAATTTGTCAGGAGAGAGCAAGGTCAGCGAGATCCGAACTAGTTCTGGGGCGTTTATTAAAAAATCCAAGGTTTGTGCATAGTTTTCTTCTTATGGTTCTTAAGCTTCCAATAGCGAAGCATAGCGATTAGACAAGTTTTTGCTTCAATTTTTAGCTTGAATCACCATCAAGCCTAAATCTTAAACTCTTAGTTTGAAATTTATTGGTTTGATAGACTTTAGATTCCCTCATGGGCTCCAAGATTAGTTTGGTTCGTTCGACCGTCTATTGAATATTGGTTTGATTTATGAAGTCTAGCTACCTTAATATGAAATGAGTGAGTACATGGCCTTGTAGTAATTTAAACCTGAGATCATCTTTCTGAGATATTGTTATAATCACCATTTGAGGAAAGAAATAAAATGTAAAAGTGTTACTCAGTCAGTCTATTCATTGATCGATATTGATTGAGAAGGGACAGATGTTACTACTTCATGCCACAAGTTTGGGAGATTAGTATTTTGGATGTCAAATTTTGTGGAATGTGTTTAGCAGCCTTAGCTGATTGAAATTTCAAATTTGTCTGCTTTGTTGACTATTGTAGCTGGAAAGCATCAAATGCCATCCTTGATCCTTCTGAGTATACAGATAGGGAGCCAATTAGTATTTTGAATGTCAAATTTTAAAGAATGGGTTCAGCAGCCTTAGCTGCTTGAAATTTCAAAATTTTCTGCTTAGTTGACTATTGTTGCTGGAAAACATTAAATGCCATCCTTGATCCTTCTGAGTGTACAGATAGGGAGCCAACTTTACTTGTAAACCTCTAACCTGATGTGGCACTCTCTATATCCCTCCATGTAAACTCATTGTTCTATATCTCATGTAGGATCCTATTGTTTCTGGTATAGAAGACAAAATTGCAGCATGGACATTTCTGCCAAAAGGTATAATAACACTAACAAAAGGCGCAAATTTCTCGCTAATCCCATAGTCTTTAGCAACTTATCCTCCATTACAAACTGTTTTCCGTCATCAAAAACTGAAGATTGAATAGATTGACAATTGAGTGTGAAATTGTGATCTTTCTTAATGCAACTTTGGAGTTGAATAGATTGACATGATATAGGTTTGCAGTTGAATTCTAAATTTCTTATAACTGAAACCATAAAGAGAAATATTGGGCTATTTATATTAATATCTAACATGAAGAAAAAAAGAACAGATAATGAAACGTTGTGTCAGATAAGTTTTTGTCTTCATTTTTCTCCATGCGCTGGTATAGTTCTATCAGCAAGACTTTATTCCAATTTCCATATAAAATAGGGAACTTGGGAAGACATAATCCCCTCGTGAAATACATACTTAATCAAGCGATATACTGAGGAAGAATTGTGCAGCTGGGAAGAAACAGAGTTTCAATTTAGCCCTTCTCATTTATTTATTTTTTAGTGAAAAAAGAAAAACTATGAATGGGAAACTCTATTCATATAAACACTTGACTCATGCATTGATAGCATGTCTGTGTATTGGTATAGCTGGTAAACCGAAACTTGAATATGCTTGATTTCAGAAAATGGAGAAGACATTCAAGTGTTGAGATATGAATATGGGCAGAAGTATGATGCACACTTCGATTACTTTGCCGACGAGGTTAATATTGCCCGTGGTGGACATCGAATGGCAACCGTTCTCATGTATCTTTCTGACGTAAAAAGAGGCGGTGAAACTGTGTTTCCTTCTGCAGAGGTCTGCCCTTGTATTTCTCTTCAATCCAATTAATTGCAACTTCCTTTTTTGTTGCTGTACTTCGACCATAATCAAGTGCCTTGGTTTTTGTTTGTACCATATTCTTTGAAAACTAATTTTCTCTCGAGTTACCTTACTGCGGCTCTTAGAATTGGAAAAGTTTCCTGTCTTGGTATTTGCATGTGCCATTATTAATTGATGGGTTTTTTTTATTCATTAAAATCTAAATGTTGAATATCTTCGTTCATCGAGTTCAGGAATCTCAAAGACGTCAGGCTTCTGAAACAAACGAAGATCTCTCAGACTGTGCAAAGAAAGGGATAGCAGGTGACTGTCTTCAGTTTTCTTACTCCTGTCCTGTGATTTGTGACGTTGGTTCAAACTCATCGAGATTTCTTATCGTTAAAAGATTTAGTTTGTCATCATATGTTTAAGAAGTTCGTGATTTGATTTGATTAGCTAGCTGTCACTCTTTATTAGCTAATTTTTCTCTTTTTGATTGCTTTGTAAAGCTACTTGTATAGCTGTGGGTGGAGGATGAAAGTCCATATCCACTAATTTAGAGAATGATAATGGGTTTATAAACAAATAATACTCTCTCCATTGGCCCAAAGCAAAGTTATGGGAGCTTATGTTCAAAGTGGACAATATCATACCATTATGGAGAGTCGTATTCGTCTAACATGGTATCAGAGTTATGCCCTAAACTTAGTCGTGCCAATAGATTGATAAATCCTCAAATATCGAACAAAAGGACTCCAAAAGAAAAGGAGTCAAGCCTCCTCGAAGGCAGTAAAAAATGACAAAGACTCCAAAGGAGTCGAGCCTCGATTAAGGGGAGGCGCACTTTGTTTGAGGGGAGGTGTTGGATGATAAAAGTCATCGGCTAATTTAGGAAATGATAAACAAAGAATACTCTCTCCATTGTTTTGATTAGGGGTTTGAGTTCATCATACAACTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTACACTCTTTAATCTACGTGCTTGAGATATTCAGTGAAACCACGGAAAGGCGACGCTCTTCTGTTCTTCAGTCTTCATCCAAATGCTGTTCCAGACACAAGCCTGAGTTTCCTGGCTACTGCAGAAAAAGTTGCA

mRNA sequence

TAAAGAAACTTTTTGCTATTTTCTTCTGCTTCGTTCTCTTTCTCTACTGATCCGATTCAGTTCATGGAGAAATTTTGCAGTTTCAATCTGCTGTTTTTCTTCTCATTATCGATTTCGTTGCTTCTCCGGCGAGCTTCAAGCTCCTATGCAGGTTCCGCTAGCTCAATCGTCAATCCTGCTAAAGTAAAGCAGATTTCATGGAATCCTCGGGCGTTTGTGTATGAAGGTTTTCTCACGGACTTAGAATCCGATCATCTCATCTCGATTGTGAGTAGAATTAGAATTTATTCGTTTTTCATTTGTGATACCGCAGTAGCTAAAGCTGAGTTGAAGAGATCTGCTGTTGCGGATAATTTGTCAGGAGAGAGCAAGGTCAGCGAGATCCGAACTAGTTCTGGGGCGTTTATTAAAAAATCCAAGGATCCTATTGTTTCTGGTATAGAAGACAAAATTGCAGCATGGACATTTCTGCCAAAAGTTCAGGAATCTCAAAGACGTCAGGCTTCTGAAACAAACGAAGATCTCTCAGACTGTGCAAAGAAAGGGATAGCAGTGAAACCACGGAAAGGCGACGCTCTTCTGTTCTTCAGTCTTCATCCAAATGCTGTTCCAGACACAAGCCTGAGTTTCCTGGCTACTGCAGAAAAAGTTGCA

Coding sequence (CDS)

ATGGAGAAATTTTGCAGTTTCAATCTGCTGTTTTTCTTCTCATTATCGATTTCGTTGCTTCTCCGGCGAGCTTCAAGCTCCTATGCAGGTTCCGCTAGCTCAATCGTCAATCCTGCTAAAGTAAAGCAGATTTCATGGAATCCTCGGGCGTTTGTGTATGAAGGTTTTCTCACGGACTTAGAATCCGATCATCTCATCTCGATTGTGAGTAGAATTAGAATTTATTCGTTTTTCATTTGTGATACCGCAGTAGCTAAAGCTGAGTTGAAGAGATCTGCTGTTGCGGATAATTTGTCAGGAGAGAGCAAGGTCAGCGAGATCCGAACTAGTTCTGGGGCGTTTATTAAAAAATCCAAGGATCCTATTGTTTCTGGTATAGAAGACAAAATTGCAGCATGGACATTTCTGCCAAAAGTTCAGGAATCTCAAAGACGTCAGGCTTCTGAAACAAACGAAGATCTCTCAGACTGTGCAAAGAAAGGGATAGCAGTGAAACCACGGAAAGGCGACGCTCTTCTGTTCTTCAGTCTTCATCCAAATGCTGTTCCAGACACAAGCCTGAGTTTCCTGGCTACTGCAGAAAAAGTTGCA

Protein sequence

MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIEDKIAAWTFLPKVQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVPDTSLSFLATAEKVA

Homology

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BLAST of Carg20153 vs. NCBI nr
Match: KAG7018657.1 (putative prolyl 4-hydroxylase 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 374.8 bits (961), Expect = 4.6e-100
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD
Sbjct: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPKVQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPN 180
           PIVSGIEDKIAAWTFLPKVQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPN
Sbjct: 121 PIVSGIEDKIAAWTFLPKVQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPN 180

Query: 181 AVPDTSLSFLATAEKVA 198
           AVPDTSLSFLATAEKVA
Sbjct: 181 AVPDTSLSFLATAEKVA 197

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BLAST of Carg20153 vs. NCBI nr
Match: XP_022955844.1 (probable prolyl 4-hydroxylase 4 [Cucurbita moschata])

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-73
Identity = 168/243 (69.14%), Postives = 169/243 (69.55%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           ESDHLISI                AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD
Sbjct: 61  ESDHLISI----------------AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKIAAWTFLPK                                          
Sbjct: 121 PIVSGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFADEVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 187
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSDVKRGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 227

[Close]

BLAST of Carg20153 vs. NCBI nr
Match: XP_023526540.1 (probable prolyl 4-hydroxylase 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.0 bits (720), Expect = 4.1e-72
Identity = 166/243 (68.31%), Postives = 167/243 (68.72%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFNLLFFFSLSISLLLR ASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNLLFFFSLSISLLLRLASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLISI                AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD
Sbjct: 61  ECDHLISI----------------AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKIAAWTFLPK                                          
Sbjct: 121 PIVSGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFADEVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 187
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSDVKKGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 227

[Close]

BLAST of Carg20153 vs. NCBI nr
Match: KAG7028942.1 (putative prolyl 4-hydroxylase 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 3.4e-71
Identity = 155/199 (77.89%), Postives = 162/199 (81.41%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           M KFCS NLLF  S+SISLLLRRASSSYAGSASSIVNPAKVKQISW+PRAFVYEGFLTDL
Sbjct: 1   MAKFCSCNLLFILSISISLLLRRASSSYAGSASSIVNPAKVKQISWSPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLIS+                AKAELKRSAVAD+LSGESKVSE+RTSSGAFI K+KD
Sbjct: 61  ECDHLISL----------------AKAELKRSAVADHLSGESKVSEVRTSSGAFIHKAKD 120

Query: 121 PIVSGIEDKIAAWTFLPKVQ--------------ESQRRQASETNEDLSDCAKKGIAVKP 180
           PIVSGIEDKIAAWTFLPK +              ESQRRQASETNEDLSDCAKKGIAVKP
Sbjct: 121 PIVSGIEDKIAAWTFLPKGRYICLYLLTYFIKSAESQRRQASETNEDLSDCAKKGIAVKP 180

Query: 181 RKGDALLFFSLHPNAVPDT 186
           RKGDALLFFSLHPNAVPDT
Sbjct: 181 RKGDALLFFSLHPNAVPDT 183

[Close]

BLAST of Carg20153 vs. NCBI nr
Match: XP_022980799.1 (probable prolyl 4-hydroxylase 4 [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-70
Identity = 163/243 (67.08%), Postives = 166/243 (68.31%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFN LFFFSLSISLLL RASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNPLFFFSLSISLLLGRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLISI                AKAELKRSAVADNLSGESKVSEIRTSSGAFI+KSKD
Sbjct: 61  ECDHLISI----------------AKAELKRSAVADNLSGESKVSEIRTSSGAFIQKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKI+AWTFLPK                                          
Sbjct: 121 PIVSGIEDKISAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFADEVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 187
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSDVKRGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 227

[Close]

BLAST of Carg20153 vs. ExPASy Swiss-Prot
Match: Q8LAN3 (Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana OX=3702 GN=P4H4 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 8.3e-44
Identity = 112/233 (48.07%), Postives = 130/233 (55.79%), Query Frame = 0


Query: 9   LLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISI 68
           LL  F    S+LL ++S+S   S+S  VNP+KVKQ+S  PRAFVYEGFLT+LE DH++S+
Sbjct: 6   LLISFFAIFSVLL-QSSTSLISSSSVFVNPSKVKQVSSKPRAFVYEGFLTELECDHMVSL 65

Query: 69  VSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIED 128
                           AKA LKRSAVADN SGESK SE+RTSSG FI K KDPIVSGIED
Sbjct: 66  ----------------AKASLKRSAVADNDSGESKFSEVRTSSGTFISKGKDPIVSGIED 125

Query: 129 KIAAWTFLPK-------------------------------------------------- 185
           KI+ WTFLPK                                                  
Sbjct: 126 KISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGGHRMATILMYLSNVTKG 185

[Close]

BLAST of Carg20153 vs. ExPASy Swiss-Prot
Match: F4JAU3 (Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=P4H2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.7e-42
Identity = 108/233 (46.35%), Postives = 131/233 (56.22%), Query Frame = 0


Query: 9   LLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISI 68
           LL F  ++I L+L ++S+    S SSI+NP+KVKQ+S  PRAFVYEGFLTDLE DHLIS+
Sbjct: 8   LLLF--VAILLVLLQSSTCLISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISL 67

Query: 69  VSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIED 128
                           AK  L+RSAVADN +GES+VS++RTSSG FI K KDPIVSGIED
Sbjct: 68  ----------------AKENLQRSAVADNDNGESQVSDVRTSSGTFISKGKDPIVSGIED 127

Query: 129 KIAAWTFLPK-------------------------------------------------- 185
           K++ WTFLPK                                                  
Sbjct: 128 KLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRIATVLLYLSNVTKG 187

[Close]

BLAST of Carg20153 vs. ExPASy Swiss-Prot
Match: Q8L970 (Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana OX=3702 GN=P4H7 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-29
Identity = 92/250 (36.80%), Postives = 125/250 (50.00%), Query Frame = 0


Query: 4   FCSFNLLFFFSLSI-----SLLLRRASSSYAG-------SASSI-VNPAKVKQISWNPRA 63
           F +F+L F F+L +     +  L R+S++  G       SASS   +P +V Q+SW PR 
Sbjct: 6   FLAFSLCFLFTLPLISSAPNRFLTRSSNTRDGSVIKMKTSASSFGFDPTRVTQLSWTPRV 65

Query: 64  FVYEGFLTDLESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTS 123
           F+YEGFL+D E DH I +                AK +L++S VADN SGES  SE+RTS
Sbjct: 66  FLYEGFLSDEECDHFIKL----------------AKGKLEKSMVADNDSGESVESEVRTS 125

Query: 124 SGAFIKKSKDPIVSGIEDKIAAWTFLPK-------------------------------- 183
           SG F+ K +D IVS +E K+AAWTFLP+                                
Sbjct: 126 SGMFLSKRQDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFHDQANLEL 185

Query: 184 ---------VQESQRRQASET-------------NEDLSDCAKKGIAVKPRKGDALLFFS 187
                    +  S   +  ET             ++  ++CAK+G AVKPRKGDALLFF+
Sbjct: 186 GGHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAKQGYAVKPRKGDALLFFN 239

[Close]

BLAST of Carg20153 vs. ExPASy Swiss-Prot
Match: F4J0A8 (Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana OX=3702 GN=P4H6 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.3e-25
Identity = 85/229 (37.12%), Postives = 113/229 (49.34%), Query Frame = 0


Query: 11  FFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISIVS 70
           +F + S+SLLL     S   S S  V+P ++ Q+SW PRAF+Y+GFL+D E DHLI +  
Sbjct: 5   YFLAFSLSLLL---IFSQISSFSFSVDPTRITQLSWTPRAFLYKGFLSDEECDHLIKL-- 64

Query: 71  RIRIYSFFICDTAVAKAELKRS-AVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIEDK 130
                         AK +L++S  VAD  SGES+ SE+RTSSG F+ K +D IV+ +E K
Sbjct: 65  --------------AKGKLEKSMVVADVDSGESEDSEVRTSSGMFLTKRQDDIVANVEAK 124

Query: 131 IAAWTFLPK-----------------------------------------VQESQRRQAS 185
           +AAWTFLP+                                         +  S   +  
Sbjct: 125 LAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGHRIATVLMYLSNVTKGG 184

[Close]

BLAST of Carg20153 vs. ExPASy Swiss-Prot
Match: Q9LN20 (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-17
Identity = 65/200 (32.50%), Postives = 94/200 (47.00%), Query Frame = 0


Query: 44  ISWNPRAFVYEGFLTDLESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESK 103
           +SW PRAFVY  FL+  E ++LIS+                AK  + +S V D+ +G+SK
Sbjct: 79  LSWEPRAFVYHNFLSKEECEYLISL----------------AKPHMVKSTVVDSETGKSK 138

Query: 104 VSEIRTSSGAFIKKSKDPIVSGIEDKIAAWTFLP-------------------------- 163
            S +RTSSG F+++ +D I+  IE +IA +TF+P                          
Sbjct: 139 DSRVRTSSGTFLRRGRDKIIKTIEKRIADYTFIPADHGEGLQVLHYEAGQKYEPHYDYFV 198

Query: 164 ---KVQESQRRQA------SETNE--------------------DLSDCAKKGIAVKPRK 188
                +   +R A      S+  E                    +LS+C KKG++VKPR 
Sbjct: 199 DEFNTKNGGQRMATMLMYLSDVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRM 258

[Close]

BLAST of Carg20153 vs. ExPASy TrEMBL
Match: A0A6J1GXF3 (Procollagen-proline 4-dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111457709 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 8.0e-74
Identity = 168/243 (69.14%), Postives = 169/243 (69.55%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           ESDHLISI                AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD
Sbjct: 61  ESDHLISI----------------AKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKIAAWTFLPK                                          
Sbjct: 121 PIVSGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFADEVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 187
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSDVKRGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 227

[Close]

BLAST of Carg20153 vs. ExPASy TrEMBL
Match: A0A6J1J084 (Procollagen-proline 4-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111480082 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.3e-71
Identity = 163/243 (67.08%), Postives = 166/243 (68.31%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           MEKFCSFN LFFFSLSISLLL RASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL
Sbjct: 1   MEKFCSFNPLFFFSLSISLLLGRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLISI                AKAELKRSAVADNLSGESKVSEIRTSSGAFI+KSKD
Sbjct: 61  ECDHLISI----------------AKAELKRSAVADNLSGESKVSEIRTSSGAFIQKSKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKI+AWTFLPK                                          
Sbjct: 121 PIVSGIEDKISAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFADEVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 187
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSDVKRGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 227

[Close]

BLAST of Carg20153 vs. ExPASy TrEMBL
Match: A0A6J1C7M6 (Procollagen-proline 4-dioxygenase OS=Momordica charantia OX=3673 GN=LOC111009125 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-67
Identity = 154/242 (63.64%), Postives = 164/242 (67.77%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           M +FCS +LLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISW+PRAFVYEGFLTDL
Sbjct: 1   MARFCSCSLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWSPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DH+IS+                AKAELKRSAVADNLSGESKVSE+RTSSGAFI K+KD
Sbjct: 61  ECDHIISL----------------AKAELKRSAVADNLSGESKVSEVRTSSGAFIHKAKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PI+SGIEDKIAAWTFLPK                                          
Sbjct: 121 PIISGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFSDKVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 186
                           +ESQRRQASETNEDLSDCAKKGIAVKPR+GDALLFFSLHPNAVP
Sbjct: 181 YLSNVEKGGETVFPSAEESQRRQASETNEDLSDCAKKGIAVKPRRGDALLFFSLHPNAVP 226

[Close]

BLAST of Carg20153 vs. ExPASy TrEMBL
Match: A0A6J1I971 (Procollagen-proline 4-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111472232 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.6e-67
Identity = 155/242 (64.05%), Postives = 162/242 (66.94%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           M KFCS NLLF  S+SISLLLRRASSSYAGSASSIVNPAKVKQISW+PRAFVYEGFLTDL
Sbjct: 1   MAKFCSCNLLFILSISISLLLRRASSSYAGSASSIVNPAKVKQISWSPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLIS+                AKAELKRSAVAD+LSGESKVSE+RTSSGAFI K+KD
Sbjct: 61  ECDHLISL----------------AKAELKRSAVADHLSGESKVSEVRTSSGAFIHKAKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKIAAWTFLPK                                          
Sbjct: 121 PIVSGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHFDYFTDKVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 186
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP
Sbjct: 181 YLSNVEKGGETVFPNAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 226

[Close]

BLAST of Carg20153 vs. ExPASy TrEMBL
Match: A0A6J1GPQ8 (Procollagen-proline 4-dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111456381 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 154/242 (63.64%), Postives = 162/242 (66.94%), Query Frame = 0


Query: 1   MEKFCSFNLLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDL 60
           M KFCS NLLF  S+SISLLLRRASSSYAGSASSIVNPAKVKQISW+PRAFVYEGFLTDL
Sbjct: 1   MAKFCSCNLLFILSISISLLLRRASSSYAGSASSIVNPAKVKQISWSPRAFVYEGFLTDL 60

Query: 61  ESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKD 120
           E DHLIS+                AKAELKRSAVAD+LSGESKVSE+RTSSGAFI K+KD
Sbjct: 61  ECDHLISL----------------AKAELKRSAVADHLSGESKVSEVRTSSGAFIHKAKD 120

Query: 121 PIVSGIEDKIAAWTFLPK------------------------------------------ 180
           PIVSGIEDKIAAWTFLPK                                          
Sbjct: 121 PIVSGIEDKIAAWTFLPKENGEDIQVLRYEYGQKYDAHYDYFTDKVNIARGGHRMATVLM 180

Query: 181 ---------------VQESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFSLHPNAVP 186
                           +ESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFF+LHPNAVP
Sbjct: 181 YLSNVEKGGETVFPNAEESQRRQASETNEDLSDCAKKGIAVKPRKGDALLFFNLHPNAVP 226

[Close]

BLAST of Carg20153 vs. TAIR 10
Match: AT5G18900.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 5.9e-45
Identity = 112/233 (48.07%), Postives = 130/233 (55.79%), Query Frame = 0


Query: 9   LLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISI 68
           LL  F    S+LL ++S+S   S+S  VNP+KVKQ+S  PRAFVYEGFLT+LE DH++S+
Sbjct: 6   LLISFFAIFSVLL-QSSTSLISSSSVFVNPSKVKQVSSKPRAFVYEGFLTELECDHMVSL 65

Query: 69  VSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIED 128
                           AKA LKRSAVADN SGESK SE+RTSSG FI K KDPIVSGIED
Sbjct: 66  ----------------AKASLKRSAVADNDSGESKFSEVRTSSGTFISKGKDPIVSGIED 125

Query: 129 KIAAWTFLPK-------------------------------------------------- 185
           KI+ WTFLPK                                                  
Sbjct: 126 KISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGGHRMATILMYLSNVTKG 185

[Close]

BLAST of Carg20153 vs. TAIR 10
Match: AT3G06300.1 (P4H isoform 2 )

HSP 1 Score: 173.3 bits (438), Expect = 1.9e-43
Identity = 108/233 (46.35%), Postives = 131/233 (56.22%), Query Frame = 0


Query: 9   LLFFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISI 68
           LL F  ++I L+L ++S+    S SSI+NP+KVKQ+S  PRAFVYEGFLTDLE DHLIS+
Sbjct: 8   LLLF--VAILLVLLQSSTCLISSPSSIINPSKVKQVSSKPRAFVYEGFLTDLECDHLISL 67

Query: 69  VSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIED 128
                           AK  L+RSAVADN +GES+VS++RTSSG FI K KDPIVSGIED
Sbjct: 68  ----------------AKENLQRSAVADNDNGESQVSDVRTSSGTFISKGKDPIVSGIED 127

Query: 129 KIAAWTFLPK-------------------------------------------------- 185
           K++ WTFLPK                                                  
Sbjct: 128 KLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRIATVLLYLSNVTKG 187

[Close]

BLAST of Carg20153 vs. TAIR 10
Match: AT3G28480.1 (Oxoglutarate/iron-dependent oxygenase )

HSP 1 Score: 128.6 bits (322), Expect = 5.4e-30
Identity = 92/250 (36.80%), Postives = 125/250 (50.00%), Query Frame = 0


Query: 4   FCSFNLLFFFSLSI-----SLLLRRASSSYAG-------SASSI-VNPAKVKQISWNPRA 63
           F +F+L F F+L +     +  L R+S++  G       SASS   +P +V Q+SW PR 
Sbjct: 6   FLAFSLCFLFTLPLISSAPNRFLTRSSNTRDGSVIKMKTSASSFGFDPTRVTQLSWTPRV 65

Query: 64  FVYEGFLTDLESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGESKVSEIRTS 123
           F+YEGFL+D E DH I +                AK +L++S VADN SGES  SE+RTS
Sbjct: 66  FLYEGFLSDEECDHFIKL----------------AKGKLEKSMVADNDSGESVESEVRTS 125

Query: 124 SGAFIKKSKDPIVSGIEDKIAAWTFLPK-------------------------------- 183
           SG F+ K +D IVS +E K+AAWTFLP+                                
Sbjct: 126 SGMFLSKRQDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFHDQANLEL 185

Query: 184 ---------VQESQRRQASET-------------NEDLSDCAKKGIAVKPRKGDALLFFS 187
                    +  S   +  ET             ++  ++CAK+G AVKPRKGDALLFF+
Sbjct: 186 GGHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAKQGYAVKPRKGDALLFFN 239

[Close]

BLAST of Carg20153 vs. TAIR 10
Match: AT3G28490.1 (Oxoglutarate/iron-dependent oxygenase )

HSP 1 Score: 117.1 bits (292), Expect = 1.6e-26
Identity = 85/229 (37.12%), Postives = 113/229 (49.34%), Query Frame = 0


Query: 11  FFFSLSISLLLRRASSSYAGSASSIVNPAKVKQISWNPRAFVYEGFLTDLESDHLISIVS 70
           +F + S+SLLL     S   S S  V+P ++ Q+SW PRAF+Y+GFL+D E DHLI +  
Sbjct: 5   YFLAFSLSLLL---IFSQISSFSFSVDPTRITQLSWTPRAFLYKGFLSDEECDHLIKL-- 64

Query: 71  RIRIYSFFICDTAVAKAELKRS-AVADNLSGESKVSEIRTSSGAFIKKSKDPIVSGIEDK 130
                         AK +L++S  VAD  SGES+ SE+RTSSG F+ K +D IV+ +E K
Sbjct: 65  --------------AKGKLEKSMVVADVDSGESEDSEVRTSSGMFLTKRQDDIVANVEAK 124

Query: 131 IAAWTFLPK-----------------------------------------VQESQRRQAS 185
           +AAWTFLP+                                         +  S   +  
Sbjct: 125 LAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGHRIATVLMYLSNVTKGG 184

[Close]

BLAST of Carg20153 vs. TAIR 10
Match: AT3G28480.2 (Oxoglutarate/iron-dependent oxygenase )

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-23
Identity = 88/258 (34.11%), Postives = 119/258 (46.12%), Query Frame = 0


Query: 4   FCSFNLLFFFSLSI-----SLLLRRASSSYAG-------SASSI-VNPAKVKQISWNPRA 63
           F +F+L F F+L +     +  L R+S++  G       SASS   +P +V Q+SW PR 
Sbjct: 6   FLAFSLCFLFTLPLISSAPNRFLTRSSNTRDGSVIKMKTSASSFGFDPTRVTQLSWTPRV 65

Query: 64  FVYEGFLTDLESDHLISIVSRIRIYSFFICDTAVAKAELKRSAVADNLSGES-----KVS 123
           F+YEGFL+D E DH I +                AK +L++S VADN SGES      VS
Sbjct: 66  FLYEGFLSDEECDHFIKL----------------AKGKLEKSMVADNDSGESVESEDSVS 125

Query: 124 EIRTSSGAFIKKSK---DPIVSGIEDKIAAWTFLPK------------------------ 183
            +R SS           D IVS +E K+AAWTFLP+                        
Sbjct: 126 VVRQSSSFIANMDSLEIDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYF 185

Query: 184 -----------------VQESQRRQASET-------------NEDLSDCAKKGIAVKPRK 187
                            +  S   +  ET             ++  ++CAK+G AVKPRK
Sbjct: 186 HDQANLELGGHRIATVLMYLSNVEKGGETVFPMWKGKATQLKDDSWTECAKQGYAVKPRK 245

The following BLAST results are available for this feature:

BLAST of Carg20153 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018657.1	4.6e-100	100.00	putative prolyl 4-hydroxylase 4, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022955844.1	1.7e-73	69.14	probable prolyl 4-hydroxylase 4 [Cucurbita moschata]	[more]
XP_023526540.1	4.1e-72	68.31	probable prolyl 4-hydroxylase 4 [Cucurbita pepo subsp. pepo]	[more]
KAG7028942.1	3.4e-71	77.89	putative prolyl 4-hydroxylase 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022980799.1	1.7e-70	67.08	probable prolyl 4-hydroxylase 4 [Cucurbita maxima]	[more]

BLAST of Carg20153 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAN3	8.3e-44	48.07	Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana OX=3702 GN=P4H4 PE=2 SV=...	[more]
F4JAU3	2.7e-42	46.35	Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=P4H2 PE=1 SV=1	[more]
Q8L970	7.6e-29	36.80	Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana OX=3702 GN=P4H7 PE=2 SV=...	[more]
F4J0A8	2.3e-25	37.12	Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana OX=3702 GN=P4H6 PE=2 SV=...	[more]
Q9LN20	1.7e-17	32.50	Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=...	[more]

BLAST of Carg20153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXF3	8.0e-74	69.14	Procollagen-proline 4-dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111457709 ...	[more]
A0A6J1J084	8.3e-71	67.08	Procollagen-proline 4-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111480082 PE...	[more]
A0A6J1C7M6	1.5e-67	63.64	Procollagen-proline 4-dioxygenase OS=Momordica charantia OX=3673 GN=LOC111009125...	[more]
A0A6J1I971	5.6e-67	64.05	Procollagen-proline 4-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111472232 PE...	[more]
A0A6J1GPQ8	1.2e-66	63.64	Procollagen-proline 4-dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111456381 ...	[more]

BLAST of Carg20153 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18900.1	5.9e-45	48.07	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]
AT3G06300.1	1.9e-43	46.35	P4H isoform 2	[more]
AT3G28480.1	5.4e-30	36.80	Oxoglutarate/iron-dependent oxygenase	[more]
AT3G28490.1	1.6e-26	37.12	Oxoglutarate/iron-dependent oxygenase	[more]
AT3G28480.2	2.2e-23	34.11	Oxoglutarate/iron-dependent oxygenase	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.620	q2cbj1_9rhob like domain	coord: 143..192 e-value: 2.5E-6 score: 29.3 coord: 40..142 e-value: 1.2E-16 score: 63.1
None	No IPR available	PANTHER	PTHR10869:SF175	PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-LIKE PROTEIN	coord: 12..139
None	No IPR available	PANTHER	PTHR10869:SF175	PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-LIKE PROTEIN	coord: 144..186
IPR045054	Prolyl 4-hydroxylase	PANTHER	PTHR10869	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	coord: 12..139
IPR045054	Prolyl 4-hydroxylase	PANTHER	PTHR10869	PROLYL 4-HYDROXYLASE ALPHA SUBUNIT	coord: 144..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20153-RA	Carg20153-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019511	peptidyl-proline hydroxylation
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0043167	ion binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen