Carg20134 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20134
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCASP-like protein
LocationCarg_Chr14: 12242613 .. 12243567 (-)
RNA-Seq ExpressionCarg20134
SyntenyCarg20134
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAGGAGAAGAAAATGGGCAGTAAAATTGAAATGATTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGATTCTTCCTCTTACGCTCTCCCTCGACCTCCATCCTCTCGATTTTACTCTCACAGCTAAATGGTATTACTTATCTGCTCTCGGGTAAGCTTCTCTCTCTCTCGAGAATTCGAACATCTACCTGTTTTTTCCCTTTTGAGTTTAATTTCACATAGGTAGAGATTCGAACGGTTAGCCTGTTGGTCAAGCTGTAACTAGTTCAAATATGCCTGTTTGATTATTTATGAACGTAATAGACACTGAGAGTTGTGGTTTTTCTGACCCATAATCATGTAGAAGAAAATTAAGCGGTATTTTTTTTTAATAATTTCATGATTTTAAGTATATTATATTTTTTTTAGGTATCTTTTGGCGACAAATATAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAACGACAACATCTTAGTCTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTTTTCTCCAGTAGCGGAGCTGCAGCGGCGGTCGGAGTCATCGCTTACCACGGAAACTCACACGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGACAAGGCCCAGTTAAATGGGCCTGAATTTGGGCCTGTTTTAAGCTTCTTCACAATACATCTAAATGGGCTTGGGCTTTGTTTATAAATTTCCTCACGGCCCATTTTAAAGCTAATTGGGCTTATTTATAACGCTTGTAGCAGCCGAAGGAGACTATTTACGTGAAATATTTTATTTACCCCTCCCTCTCAAACTGAAGTAAAT

mRNA sequence

AAAGAGGAGAAGAAAATGGGCAGTAAAATTGAAATGATTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGATTCTTCCTCTTACGCTCTCCCTCGACCTCCATCCTCTCGATTTTACTCTCACAGCTAAATGGTATTACTTATCTGCTCTCGGGTATCTTTTGGCGACAAATATAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAACGACAACATCTTAGTCTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTTTTCTCCAGTAGCGGAGCTGCAGCGGCGGTCGGAGTCATCGCTTACCACGGAAACTCACACGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGACAAGGCCCAGTTAAATGGGCCTGAATTTGGGCCTGTTTTAAGCTTCTTCACAATACATCTAAATGGGCTTGGGCTTTGTTTATAAATTTCCTCACGGCCCATTTTAAAGCTAATTGGGCTTATTTATAACGCTTGTAGCAGCCGAAGGAGACTATTTACGTGAAATATTTTATTTACCCCTCCCTCTCAAACTGAAGTAAAT

Coding sequence (CDS)

ATGGGCAGTAAAATTGAAATGATTTTTAGGGTTTCGGGATTTGTGTTGTGTTTTGTGGCAGCCATTGTTGTGGGACTCAACGAACAAACCACGATTCTTCCTCTTACGCTCTCCCTCGACCTCCATCCTCTCGATTTTACTCTCACAGCTAAATGGTATTACTTATCTGCTCTCGGGTATCTTTTGGCGACAAATATAATAGCATGTTCGTATAGCTTCATATCGTTGTTCTTTTTGTTAAAAGACACGAGTAACGACAACATCTTAGTCTTATTGGTCATCATTCTCGACACGGTCATGGTGGCACTGCTTTTCTCCAGTAGCGGAGCTGCAGCGGCGGTCGGAGTCATCGCTTACCACGGAAACTCACACGACATATATGGTAGATTTTGCATACAAGTGGCAGCCTCTACTGTGCTCTCTCTTGCTGGAGCTGTAGTATTTATGTTGCTAGTTGTGTTGGCTACTGTGGGCCTCCAGACAAGGCCCAGTTAA

Protein sequence

MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSHDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS
Homology
[Close]
BLAST of Carg20134 vs. NCBI nr
Match: KAG7018638.1 (hypothetical protein SDJN02_20508 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 298.1 bits (762), Expect = 4.6e-77
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY
Sbjct: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120

Query: 121 GNSHDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSHDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS
Sbjct: 121 GNSHDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 164

[Close]
BLAST of Carg20134 vs. NCBI nr
Match: KAG6582239.1 (hypothetical protein SDJN03_22241, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.8 bits (743), Expect = 7.3e-75
Identity = 163/171 (95.32%), Postives = 164/171 (95.91%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTT+LPLTLSLDLHPLDFTLTAKWYYLSALGY
Sbjct: 11  MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLHPLDFTLTAKWYYLSALGY 70

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 71  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 130

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS
Sbjct: 131 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 181

[Close]
BLAST of Carg20134 vs. NCBI nr
Match: XP_022955984.1 (CASP-like protein 1E2 [Cucurbita moschata])

HSP 1 Score: 284.3 bits (726), Expect = 6.8e-73
Identity = 160/171 (93.57%), Postives = 162/171 (94.74%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEM+FRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDL PLDFTLTAKWYYLSALGY
Sbjct: 11  MGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLPPLDFTLTAKWYYLSALGY 70

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSYSFISLFFLLKDTSNDNIL+LLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 71  LLATNIIACSYSFISLFFLLKDTSNDNILILLVIILDTVMVALLFSSSGAAAAVGVIAYH 130

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 131 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 181

[Close]
BLAST of Carg20134 vs. NCBI nr
Match: XP_023528371.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.9 bits (725), Expect = 8.9e-73
Identity = 159/171 (92.98%), Postives = 162/171 (94.74%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEM+FRVSGFVLCFVAAIVVGLNEQTT+LPLTLSLDL PLDFTLTAKWYYLSALGY
Sbjct: 11  MGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTVLPLTLSLDLPPLDFTLTAKWYYLSALGY 70

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATN+IACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 71  LLATNVIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 130

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 131 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 181

[Close]
BLAST of Carg20134 vs. NCBI nr
Match: XP_022979934.1 (CASP-like protein 1E2 [Cucurbita maxima])

HSP 1 Score: 265.8 bits (678), Expect = 2.5e-67
Identity = 153/171 (89.47%), Postives = 156/171 (91.23%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEM+FRV GFVL FVAAIVVGL+EQTT+LPLTLS DL PLDFTLTAKWYYLS LGY
Sbjct: 21  MGSKIEMVFRVLGFVLSFVAAIVVGLDEQTTVLPLTLSPDLPPLDFTLTAKWYYLSTLGY 80

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSY FISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAY 
Sbjct: 81  LLATNIIACSYCFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYL 140

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 141 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 191

[Close]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.1e-28
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 0 

Query: 6   EMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATN 65
           +++ R+  F +  VAAIV+ +++QT ++P+ LS  L PLD  LTAKW+ +SA+ Y L TN
Sbjct: 23  DLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTN 82

Query: 66  IIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSH- 125
            IAC+Y+ +SL   L +      L  L+ +LD  MVALLFS +GAAAAVGV+ Y GNSH 
Sbjct: 83  AIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSHV 142

Query: 126 ------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTR 163
                 +++G+FC Q+AAS  +SL G++ F+LLV++  V L  R
Sbjct: 143 NWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHRR 186

[Close]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.0e-28
Identity = 74/164 (45.12%), Postives = 108/164 (65.85%), Query Frame = 0 

Query: 6   EMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATN 65
           +++ R+  F +  VAAIV+ +++QT ++P+ LS    PL+  LTAKW+ +SA  Y L TN
Sbjct: 24  DLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFLVTN 83

Query: 66  IIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSH- 125
            IAC+Y+ +SL   L +      L  L+ +LDT MVALLFS +GAAAAVG++ Y GNSH 
Sbjct: 84  AIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGNSHV 143

Query: 126 ------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTR 163
                 +++G+FC Q+AAS  +SL G++ F+LLVV+  V L  R
Sbjct: 144 NWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHRR 187

[Close]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 74/163 (45.40%), Postives = 106/163 (65.03%), Query Frame = 0 

Query: 7   MIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATNI 66
           ++ RV  FVL   AAIV G+N QT  +P+ L+  + PL   + AKW+YLSA  + + +N 
Sbjct: 31  LVLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNA 90

Query: 67  IACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSH-- 126
           IACSY+ IS   ++        +V +++ LD +MVALLFSS+GAA A+GV+ Y GNSH  
Sbjct: 91  IACSYAAIS---VMLSFCGKKSMVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVK 150

Query: 127 -----DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTR 163
                +++G+FC QVAAS VLSL G++VF+LLV+L    L  +
Sbjct: 151 WNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNK 190

[Close]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.5e-25
Identity = 69/164 (42.07%), Postives = 104/164 (63.41%), Query Frame = 0 

Query: 6   EMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATN 65
           +++ RV    L  VAA+++G+++QT ++ L L   L P+D  +TAKW YLSA  Y + +N
Sbjct: 31  DLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAFVYFVVSN 90

Query: 66  IIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSH- 125
            IACSY+ +SL   + ++  +  L L + ++D VMVALLFSS+GAA A+G++ Y GNS  
Sbjct: 91  AIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMGYEGNSRV 150

Query: 126 ------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTR 163
                 +++G+FC QVA +  LS  G + F LLVV+A   L  R
Sbjct: 151 RWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

[Close]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 9.4e-25
Identity = 70/167 (41.92%), Postives = 111/167 (66.47%), Query Frame = 0 

Query: 3   SKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLL 62
           S  +++ RV   VL   AAIV+G+++QT ++P+ +   L  ++  ++AKW+YLSA  Y +
Sbjct: 28  STCDLLLRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSV 87

Query: 63  ATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGN 122
           A+N IACSY+ +SL   +   S    ++ +VI+LD +MVA+LFSS+GAA A+G++ Y GN
Sbjct: 88  ASNAIACSYAALSLVLAV---SGKKGIMSIVIVLDLLMVAMLFSSNGAALAIGLMGYQGN 147

Query: 123 SH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTR 163
           SH        ++GRFC QVA S  LSL G+++F+LLV + ++ L  +
Sbjct: 148 SHVRWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKK 191

[Close]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match: A0A6J1GXS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457818 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.3e-73
Identity = 160/171 (93.57%), Postives = 162/171 (94.74%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEM+FRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDL PLDFTLTAKWYYLSALGY
Sbjct: 11  MGSKIEMVFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLPPLDFTLTAKWYYLSALGY 70

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSYSFISLFFLLKDTSNDNIL+LLVIILDTVMVALLFSSSGAAAAVGVIAYH
Sbjct: 71  LLATNIIACSYSFISLFFLLKDTSNDNILILLVIILDTVMVALLFSSSGAAAAVGVIAYH 130

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 131 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 181

[Close]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match: A0A6J1IXZ0 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479476 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-67
Identity = 153/171 (89.47%), Postives = 156/171 (91.23%), Query Frame = 0 

Query: 1   MGSKIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGY 60
           MGSKIEM+FRV GFVL FVAAIVVGL+EQTT+LPLTLS DL PLDFTLTAKWYYLS LGY
Sbjct: 21  MGSKIEMVFRVLGFVLSFVAAIVVGLDEQTTVLPLTLSPDLPPLDFTLTAKWYYLSTLGY 80

Query: 61  LLATNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYH 120
           LLATNIIACSY FISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAY 
Sbjct: 81  LLATNIIACSYCFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYL 140

Query: 121 GNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           GNSH       DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQ RPS
Sbjct: 141 GNSHVQWNKVCDIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQKRPS 191

[Close]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match: A0A1S3AWX9 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483799 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 127/168 (75.60%), Postives = 140/168 (83.33%), Query Frame = 0 

Query: 4   KIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLA 63
           K+EM+FRV GFVL FVAAIVVGLN QT ++PLT+SL+  PLD+T  AKW+YLSA  YLLA
Sbjct: 36  KVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLTVSLNTPPLDYTFIAKWHYLSAFVYLLA 95

Query: 64  TNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNS 123
           TNIIACSYSF+SLF LLK  S DNIL LL+I+LDTVMVALLFS SGAA AVGVIAY GNS
Sbjct: 96  TNIIACSYSFVSLFLLLKKKSKDNILGLLIIVLDTVMVALLFSGSGAAGAVGVIAYQGNS 155

Query: 124 H-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           H       DIYGRFC QVAASTVLSLAGAVVFM LVVLA+VGLQ RP+
Sbjct: 156 HVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLVVLASVGLQKRPN 203

[Close]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match: A0A0A0LAI6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151490 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.7e-53
Identity = 125/168 (74.40%), Postives = 140/168 (83.33%), Query Frame = 0 

Query: 4   KIEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLA 63
           K+EM+FRV GFVL FVAAIVVGLN QT ++PL +SL+  PLD+T  AKW+YLSA  YLLA
Sbjct: 31  KVEMVFRVLGFVLSFVAAIVVGLNNQTKVVPLAVSLNSPPLDYTFIAKWHYLSAFVYLLA 90

Query: 64  TNIIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNS 123
           TNIIACSYSF+SLF LLK+ S DNIL LL+I+LDTVMVALLFS SGAA AVGVIAY GN+
Sbjct: 91  TNIIACSYSFLSLFLLLKNKSKDNILGLLIIVLDTVMVALLFSGSGAAGAVGVIAYQGNT 150

Query: 124 H-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRPS 165
           H       DIYGRFC QVAASTVLSLAGAVVFM LVVLA+VGLQ RP+
Sbjct: 151 HVQWNKVCDIYGRFCKQVAASTVLSLAGAVVFMSLVVLASVGLQKRPN 198

[Close]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match: A0A6J1IJ94 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474829 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53
Identity = 124/165 (75.15%), Postives = 142/165 (86.06%), Query Frame = 0 

Query: 6   EMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLATN 65
           +M FRV GFVL  VAAIVVGLN+Q+ ++PLT+SL+L PLD+TL A W+YLSAL YLL+TN
Sbjct: 31  QMGFRVLGFVLSLVAAIVVGLNKQSKVVPLTVSLNLPPLDYTLIANWHYLSALVYLLSTN 90

Query: 66  IIACSYSFISLFFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNSH- 125
           +IACSYSF+S  FLLK+ + DNIL LLVI+LDTVMVALLFSSSGAAAAVGVIAYHGNSH 
Sbjct: 91  VIACSYSFLSFAFLLKNKNKDNILALLVIVLDTVMVALLFSSSGAAAAVGVIAYHGNSHV 150

Query: 126 ------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGLQTRP 164
                 D+YGRFC Q+AASTVLSLAGAVVFMLLVVLA+VGLQ RP
Sbjct: 151 QWNKVCDVYGRFCKQMAASTVLSLAGAVVFMLLVVLASVGLQKRP 195

[Close]
BLAST of Carg20134 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23
Identity = 70/163 (42.94%), Postives = 101/163 (61.96%), Query Frame = 0 

Query: 5   IEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSALGYLLAT 64
           +E+  RV   VL  VAA V+G+ +QT ++P+ L   L PL+ + TAK  YLSA  Y ++ 
Sbjct: 27  LELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISA 86

Query: 65  NIIACSYSFISL-FFLLKDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVIAYHGNS 124
           N IAC Y+ IS+   ++        L++ V+I D +MVALLFSS+GAA A+G++  HGN 
Sbjct: 87  NAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNK 146

Query: 125 H-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 160
           H        ++G+FC Q A S  ++L  +VVFMLLVVL  + L
Sbjct: 147 HVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]
BLAST of Carg20134 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 5.3e-23
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 0 

Query: 1   MGSK--IEMIFRVSGFVLCFVAAIVVGLNEQTTILPLTLSLDLHPLDFTLTAKWYYLSAL 60
           +GS+  +E+  RV   +L   AA V+G+ +QT ++ + L   L PLD T TAK  YLSA 
Sbjct: 21  LGSRKGVELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAF 80

Query: 61  GYLLATNIIACSYSFISLFFLLKDTSNDNILVLLVIIL-DTVMVALLFSSSGAAAAVGVI 120
            Y ++ N IAC Y+ IS+  L+      +  +L+V++L D VMVALLFS +GAA+A+G++
Sbjct: 81  VYNISVNAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLM 140

Query: 121 AYHGNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 160
             HGN H        ++G+FC + A S  L+L  AVVFM LVVL  + L
Sbjct: 141 GLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]
BLAST of Carg20134 vs. TAIR 10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 42.7 bits (99), Expect = 3.2e-04
Identity = 47/169 (27.81%), Postives = 81/169 (47.93%), Query Frame = 0 

Query: 3   SKIEMIFRVSGFVLCFVAAIVVGLNEQT--TILPLTLSLDLHPLDFTLTAKWYYLSALGY 62
           S  +++ R   F     + +V+  ++QT    LP T  + +   +FT +       AL Y
Sbjct: 27  SMTQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT-PIRIPAAEFTNS------PALIY 86

Query: 63  LLATNIIACSYSFISLFFLL---KDTSNDNILVLLVIILDTVMVALLFSSSGAAAAVGVI 122
            +    +AC YS +S F  +   K  S   +L+L + I+D VMV ++ S++GA   V  +
Sbjct: 87  FVVALSVACFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYL 146

Query: 123 AYHGNSH-------DIYGRFCIQVAASTVLSLAGAVVFMLLVVLATVGL 160
              GN          IY +FC  V  +  +SL  +VV +LL +++ + L
Sbjct: 147 GLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSL 188

The following BLAST results are available for this feature:
BLAST of Carg20134 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7018638.14.6e-77100.00hypothetical protein SDJN02_20508 [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6582239.17.3e-7595.32hypothetical protein SDJN03_22241, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022955984.16.8e-7393.57CASP-like protein 1E2 [Cucurbita moschata][more]
XP_023528371.18.9e-7392.98CASP-like protein 1E2 [Cucurbita pepo subsp. pepo][more]
XP_022979934.12.5e-6789.47CASP-like protein 1E2 [Cucurbita maxima][more]
BLAST of Carg20134 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
C6SZP81.1e-2845.73CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1[more]
C6TBD07.0e-2845.12CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1[more]
B9RT042.2e-2645.40CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1[more]
A7NW785.5e-2542.07CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1[more]
B9HMP69.4e-2541.92CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S... [more]
BLAST of Carg20134 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXS63.3e-7393.57CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111457818 PE=3 SV=1[more]
A0A6J1IXZ01.2e-6789.47CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479476 PE=3 SV=1[more]
A0A1S3AWX92.0e-5475.60CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483799 PE=3 SV=1[more]
A0A0A0LAI61.7e-5374.40CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151490 PE=3 SV=1[more]
A0A6J1IJ942.9e-5375.15CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474829 PE=3 SV=1[more]
BLAST of Carg20134 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G15630.15.3e-2342.94Uncharacterised protein family (UPF0497) [more]
AT4G15620.15.3e-2342.60Uncharacterised protein family (UPF0497) [more]
AT4G15610.13.2e-0427.81Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 8..156
e-value: 1.9E-25
score: 87.4
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 3..147
e-value: 1.7E-29
score: 102.5
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 4..162
NoneNo IPR availablePANTHERPTHR11615:SF253CASP-LIKE PROTEIN 1E1coord: 4..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20134-RACarg20134-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane