Carg20104 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg20104
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranslationally-controlled tumor protein homolog
LocationCarg_Chr14: 12087083 .. 12088792 (+)
RNA-Seq ExpressionCarg20104
SyntenyCarg20104
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATCTTTGGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTATTGATATTATGAGTTTTCGATTATTTATGTTTTTGTTTAGTATCTGTATTTTTGTATAGGATATCGGTTTTGAGCTGTTAGGGTTTTCTGTTGTTGTGTGGTTTATATGGATTCTTTGTATATCGATCTGATACATAATTTAGAGTTGTTGATTTTGGTTTAACTGATACCATTTGATTCATGCCATACAAGATTTTACAAATATGCGTAATAGCCTTTTGATTAGCTGTTGGGGAGAGAGCTCTCTTCGGATTGAAGAAGTATATTTCTCATAATCGATTGTGTTCTAGAGTATTTGATGTTATTGGCGTAAAATTTTTGGACTTTCTTCTTTTCACTTGTGTGAAGGATTTGTTTAAATTCCTTTTGATTAGCTGTTGGAGAGAGCTCTCTGTGGATTGAAGACGTATATTTCTCATAATCGATTGTGTTCTAGAGTATTGGATGTTATTGGTGTAAAATTTTTGGACTCTGTTCTTTTAATTTGTGTGAAGGATTTGTTTAAATTTTATATCAGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGGTTAGTTATTTTCGTTTAATGTAATTTTTTTTCACGTTTCATGTGCGTAAGAACAATTTTTTTTGTGTTAATGGTACCAAGTTTTTAGTTTCTTGCACAATTTATTGCAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGTAGGCATGCCTCCTCCTTAAGAAGGTTCAAGGATTATGCAAACATTCAAGCAGAATTTATTAATTTATTTCAATTTGGGTTTCCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTGTAAGTATTTCAGTAGTTGTCTATGTGTTCTTGGTTTATGCCAACCAAATCTTCTAACCTGTTGTGGTCGATTTGGTTCGAGTTTTTGTATCACTAGAACGATACCTAACATACGATATGTTGTTTTGCAGCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACCTTTGTTTACTGAGAGCTTTTGTCCTGCTGAATGCGAAAGTTTACTCTATTTATGTGCCCAAGAATCTCTACTTTTATCGTATCAACTGCTCGTTATTATTCGTCCGTTCTTCGATTTGATAACCCAAAATGGTTCTCT

mRNA sequence

TCATCTTTGGATTGCCGTACTCCCTCGCCTCATAAATTTTCAAGAGGGATCCGGGAATCTACTCTGCAACCATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGAAAAGAACAAAAGTTCATAGCAGAATGCTTCATATAGCATTGTTAGTTTCTACTATTTTTGCCTGTTCTCATGACATTTGAATTTTTGAATGGTTTGGGCTGTTTTCTTTTTTGTTTTGGTTTAGTTTGGGTTTCTTTGTTTTGACCTTTGTTTACTGAGAGCTTTTGTCCTGCTGAATGCGAAAGTTTACTCTATTTATGTGCCCAAGAATCTCTACTTTTATCGTATCAACTGCTCGTTATTATTCGTCCGTTCTTCGATTTGATAACCCAAAATGGTTCTCT

Coding sequence (CDS)

ATGTTGGTTTACACCGATCTTCTCTCCGGTGATGAGCTTCTCTCGGATTCGTTTCCATACAAAGAAATCGAGAATGGAATGATCTGGGAAGTCGATGGAAAGTGGGTCGTTCAAGGAGCAGTTGATGTGGACATTGGTGCCAACCCTTCTGCTGAAGGTGCTGGCGAGGATGAAGGTGTTGATGATCAGGCAGTGAAGGTTGTCGACATTGTCGATACCTTCAGGCTTCAGGAGCAACCTCCCTTGGACAAGAAGTTGTTCATTGCATACATCAAGAAATACATCAAATTGGTGACACCTAAACTGGAAGGGGAGAAACAAGAGGCATTCAAGAAGAACATTGAGGGAGCAACCAAATATCTCCTTGCAAAGCTCAAGGACTTGCAATTCTTCGTCGGGGAGAGTATGCATGACGATAGCTCTATGGTATTTGCATACTACAAGGAAGGAGCCACTGACCCAACATTTTTATACCTCGCCCCAGGTTTGAAGGAAGTCAAGTGCTGA

Protein sequence

MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGVDDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKYLLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Homology
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BLAST of Carg20104 vs. NCBI nr
Match: XP_022956345.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526154.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo] >KAG6582209.1 Translationally-controlled tumor protein-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018608.1 Translationally-controlled tumor protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338.2 bits (866), Expect = 4.1e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

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BLAST of Carg20104 vs. NCBI nr
Match: XP_038878221.1 (translationally-controlled tumor protein homolog [Benincasa hispida])

HSP 1 Score: 321.6 bits (823), Expect = 4.0e-84
Identity = 158/168 (94.05%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGA+DVDIGANPSAEGAG+DEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAIDVDIGANPSAEGAGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP+DKK  I YIKKYIK VTPKLEGEKQEAFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPMDKKTLITYIKKYIKAVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKDLQFFVGESM DDSS+VFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMADDSSIVFAYYKEGATDPTFLYLAPGLKEVKC 168

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BLAST of Carg20104 vs. NCBI nr
Match: XP_022937958.1 (translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973732.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_022975167.1 translationally-controlled tumor protein homolog [Cucurbita maxima] >XP_023539947.1 translationally-controlled tumor protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

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BLAST of Carg20104 vs. NCBI nr
Match: Q2PS27.1 (RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltName: Full=CmTCTP [Cucurbita maxima] >ABC02401.1 translationally controlled tumor protein [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 5.9e-80
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

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BLAST of Carg20104 vs. NCBI nr
Match: KAF7150818.1 (hypothetical protein RHSIM_Rhsim02G0008500 [Rhododendron simsii])

HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79
Identity = 148/168 (88.10%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI NG++WEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGVLWEVEGKWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKLEGEKQEEFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KL DLQFFVGESMHDDS+MVFA+YKEGATDPTFLY   GLKEVKC
Sbjct: 121 LLGKLSDLQFFVGESMHDDSTMVFAFYKEGATDPTFLYFGHGLKEVKC 168

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BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match: Q2PS27 (Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=TCTP PE=2 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 7.8e-83
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD +FFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match: Q9M5I8 (Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 144/168 (85.71%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DL+SGDELLSDSFPYKEIENGMIWEV+GKWVV+GAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK+F++ IKKYIK +TP L+GE+QEAFK  IEGA KY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL K+KDLQFFVGESM DDS+MVFAYYKEGATDPTFLY+APGLKEVKC
Sbjct: 121 LLPKVKDLQFFVGESMADDSAMVFAYYKEGATDPTFLYIAPGLKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match: P43349 (Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN=TCTP PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 141/168 (83.93%), Postives = 155/168 (92.26%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI+NGM+WEV GKWVVQGAVDV+IGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK F+ YIK+YIK +TPKLEGE QEAFKKNIE ATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKD QFFVGE MHDDS++VFAYYK+G+ DPTFLYLAPGLKE+KC
Sbjct: 121 LLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168

[Close]
BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match: P35681 (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TCTP PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 5.8e-78
Identity = 138/168 (82.14%), Postives = 154/168 (91.67%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPY+EIENG++WEVDGKWVVQGA+DVDIGANPSAEG G+DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+ ++K+YIK ++ KL+ EKQE FKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDD  +VFAYYK+GATDPTFLY + GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match: Q9M5G3 (Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=TCTP PE=2 SV=2)

HSP 1 Score: 290.0 bits (741), Expect = 1.7e-77
Identity = 141/168 (83.93%), Postives = 153/168 (91.07%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D LSGDELLSDSFPY+E+ENG++WEVDG WVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP  DKK FIAYIK+YIK +T KLEGE+ +AFKKN+E ATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL+KLKDLQFFVGESMHDD S+VFAYY+EGA DPTFLY A GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match: A0A6J1GXJ9 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111458073 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV
Sbjct: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC
Sbjct: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match: A0A6J1ICB3 (translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474201 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.8e-81
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match: A0A6J1FHH5 (translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444190 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.8e-81
Identity = 151/168 (89.88%), Postives = 160/168 (95.24%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGMIWEV+GKWVVQGAVDVDIGANPSAEG GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQP +DKK FIAYIKK+IKL+TPKLEGEKQEAFKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKD QFFVGESMHDDS +VFAYY+EGATDPTFLYLAP LKEVKC
Sbjct: 121 LLPKLKDFQFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match: A0A6A4L0D0 (TCTP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_14865 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.4e-79
Identity = 147/168 (87.50%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEI NG++WEV+GKWVVQGAVDVDIGANPSAEG G+DEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGVLWEVEGKWVVQGAVDVDIGANPSAEGGGDDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK F+AYIKKYIKL+TPKLEGEKQE FKKNIEGATK+
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKQFVAYIKKYIKLLTPKLEGEKQEEFKKNIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KL DLQFFVGESMHDDS+MVFA+YKEGATDPTFLY   GLKEVKC
Sbjct: 121 LLGKLSDLQFFVGESMHDDSTMVFAFYKEGATDPTFLYFGHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match: W1P5L1 (TCTP domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00045p00225280 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.2e-79
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKE+ENGM+WEVDGKWVVQGA+DVDIGANPSAEGA E EGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEMENGMLWEVDGKWVVQGAIDVDIGANPSAEGADEGEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDIVDTFRLQEQPP DKK+F++YIKKYIKL+TPKL+ E+QE FKK+IEGATKY
Sbjct: 61  DDQAVKVVDIVDTFRLQEQPPFDKKMFVSYIKKYIKLLTPKLDTEQQEIFKKHIEGATKY 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL KLKDLQFFVGESMHDDSS+VFAYYKEGATDPTFLY A GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDSSLVFAYYKEGATDPTFLYFAYGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TAIR 10
Match: AT3G16640.1 (translationally controlled tumor protein )

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-73
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY DLL+GDELLSDSFPYKEIENG++WEV+GKWV  GAVDV+IGANPSAE  GEDEGV
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DD   KVVDIVDTFRLQEQP  DKK FIAYIKKYIKL+TPKL  E Q  FKK IEGATK+
Sbjct: 61  DDSTQKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLSEEDQAVFKKGIEGATKF 120

Query: 121 LLAKLKDLQFFVGESMHDDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           LL +L D QFFVGE MHDDS++VFAYYKEG+T+PTFLY A GLKEVKC
Sbjct: 121 LLPRLSDFQFFVGEGMHDDSTLVFAYYKEGSTNPTFLYFAHGLKEVKC 168

[Close]
BLAST of Carg20104 vs. TAIR 10
Match: AT3G05540.1 (Methionine sulfoxide reductase (MSS4-like) family protein )

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70
Identity = 127/169 (75.15%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MLVYTDLLSGDELLSDSFPYKEIENGMIWEVDGKWVVQGAVDVDIGANPSAEGAGEDEGV 60
           MLVY D+L+GDELLSDSFPYKEIENGM+WEV+GKWVV+GA+D DIGANP  EG GEDEGV
Sbjct: 1   MLVYQDILTGDELLSDSFPYKEIENGMLWEVEGKWVVKGAMDFDIGANPGEEG-GEDEGV 60

Query: 61  DDQAVKVVDIVDTFRLQEQPPLDKKLFIAYIKKYIKLVTPKLEGEKQEAFKKNIEGATKY 120
           DDQAVKVVDI+DTFRLQEQP  DKK F+ ++K+YIK ++PKL+ E QE FKK+IE ATK+
Sbjct: 61  DDQAVKVVDIIDTFRLQEQPSFDKKQFVMFMKRYIKQLSPKLDSENQELFKKHIESATKF 120

Query: 121 LLAKLKDLQFFVGESMH-DDSSMVFAYYKEGATDPTFLYLAPGLKEVKC 169
           L++KLKD QFFVGESM  ++ S+VFAYY+EGATDPTFLYLA GLKE+KC
Sbjct: 121 LMSKLKDFQFFVGESMEGEEGSLVFAYYREGATDPTFLYLAYGLKEIKC 168

The following BLAST results are available for this feature:
BLAST of Carg20104 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956345.14.1e-89100.00translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_023526... [more]
XP_038878221.14.0e-8494.05translationally-controlled tumor protein homolog [Benincasa hispida][more]
XP_022937958.12.0e-8089.88translationally-controlled tumor protein homolog [Cucurbita moschata] >XP_022973... [more]
Q2PS27.15.9e-8089.29RecName: Full=Translationally-controlled tumor protein homolog; Short=TCTP; AltN... [more]
KAF7150818.12.2e-7988.10hypothetical protein RHSIM_Rhsim02G0008500 [Rhododendron simsii][more]
BLAST of Carg20104 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q2PS277.8e-8389.29Translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=... [more]
Q9M5I83.0e-7985.71Translationally-controlled tumor protein homolog OS=Cucumis melo OX=3656 GN=TCTP... [more]
P433493.0e-7983.93Translationally-controlled tumor protein homolog OS=Solanum tuberosum OX=4113 GN... [more]
P356815.8e-7882.14Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica... [more]
Q9M5G31.7e-7783.93Translationally-controlled tumor protein homolog OS=Hordeum vulgare OX=4513 GN=T... [more]
BLAST of Carg20104 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GXJ92.0e-89100.00translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1ICB39.8e-8189.88translationally-controlled tumor protein homolog OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1FHH59.8e-8189.88translationally-controlled tumor protein homolog OS=Cucurbita moschata OX=3662 G... [more]
A0A6A4L0D02.4e-7987.50TCTP domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=26292... [more]
W1P5L13.2e-7987.50TCTP domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00045p0... [more]
BLAST of Carg20104 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G16640.14.4e-7379.17translationally controlled tumor protein [more]
AT3G05540.11.2e-7075.15Methionine sulfoxide reductase (MSS4-like) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018105Translationally controlled tumour proteinPRINTSPR01653TCTPROTEINcoord: 1..21
score: 63.78
coord: 46..57
score: 67.26
coord: 60..79
score: 60.36
IPR018105Translationally controlled tumour proteinPFAMPF00838TCTPcoord: 1..164
e-value: 4.6E-57
score: 192.9
IPR018105Translationally controlled tumour proteinPANTHERPTHR11991TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATEDcoord: 1..168
IPR011323Mss4/translationally controlled tumour-associated TCTPGENE3D2.170.150.10Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain Acoord: 1..168
e-value: 1.0E-56
score: 193.8
NoneNo IPR availablePANTHERPTHR11991:SF11TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOGcoord: 1..168
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01002TCTP_1coord: 45..55
IPR018103Translationally controlled tumour protein, conserved sitePROSITEPS01003TCTP_2coord: 125..147
IPR034737Translationally controlled tumour protein (TCTP) domainPROSITEPS51797TCTP_3coord: 1..168
score: 59.72047
IPR011057Mss4-like superfamilySUPERFAMILY51316Mss4-likecoord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20104-RACarg20104-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032502 developmental process
biological_process GO:0042127 regulation of cell population proliferation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005509 calcium ion binding