Carg20086 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20086
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	plastid transcriptionally active 6
Location	Carg_Chr09: 3983932 .. 3987592 (-)
RNA-Seq Expression	Carg20086
Synteny	Carg20086

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTTGCCCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCAGAGAGGTTAGTGGCCGTTTTGCGTAGTTCATTTCAATTCTTGCTTTCACAGATTTATATGATAGTTGAAAGAATTATTCGTTGATGTGTATTGTGGCTGTAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGGTACCATTCTTTGTGTTTTATATACATCAAGAACATGTAAACTGTCTATTTTGGTCCTGAATTTTGGATTAGAAGACTATTTGAACCAGTTTCATTACTGATTAGCAAATTATTCATCAGAAACTTGGGATGTTCATTTAGCTTGTTGACTGACAATCATTTATGTAACGGCTTGAGCCGACCGCTGGTGGATATTGTCTTGTTTGTGCTTTCCCTCAAGGTTTTAAAACGCATATGCTAGGGAGTGATTTCCACCCATTTATAAAGAATGTTTCGTTTTCCTCCCAAACCGACGTAGGATCTCACAATCCACCCCATTCAGGGACCATCGTCCTCGTTGACACCCGTTTCCTTCTCCAATCGATGTGGAACCTCCCAATTCGCCTCCCTTTGGGGTTCAATGTTCTTGTTGGCACACCGCCTTGTGTCCACCCCTCGCCTCGTGTGTCCTTGTTGGCACACTGCCTCATGTCCACCCCCTTCAGGACTCAGCCTCCACGCTGGCACATTGCCTGGTGTCTGGCTCTGGTATCATTTGTAACGGCCCAAGCTCACTGCTAGCGATATTGTCCTCTTTGGGCTTTCCTTTCTAGGGTTTCCCTCAAGTTTTTAAAACACGTCTGCTAGTGGTTTCCACCTCAAGTTTTTAAAACGCGTCTACTAGTGGTTTCCACACCCTTATGAAGAATGTTTCGTTCTCTTCCCCAACTGATGTGGGATCTCACAATCCACCCCCTTTCAGAGCCCAGTGTCCTCGCTGACACTCGTTCCCTTTTCCAATTGGTATGGGTCCCCCAACCCACTCCCCTTCAGGGCCCAGTGTCCTTGCTGGACGCCGTCTCGTGTGTCCTTGTTGGCACATCTCATGTCTACCTCCCTTCGAGATTCAGCCTCCTCGTTGGCACATTGTCCAGTGTCTGGTCTTATGGAACAAACATCATAGTTCGAAGTACCAAAATAGGATTTCAAAAAGATATTTTGATGCATAAGGATTGATTTTATTTGTTTATGGTCTTGCTTTTCTTCACAACTGCAGTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTAAGGGTACACTCAGGACTTCGGTATTTGTTCACTCTTTACTTGATTTCTAGAGAAAATGATGATAATTTCAAATGGAATTCTACTATACTTCATTATTTCATTGACTCAGGGCTATGTATATTGAAGATTATAGGAATGCAGTTAGTTGACATTTCTTTGTAATTCGGAGTATGGGGTTTCCGATAGAATATTAGAATAGAAGTAGTCGGTAGGACATGAGAAATGCTGCTCGTAGACTTAGTAACGGTAACAGCCCAAGCCCACCGCTAACAGATATTGTCCTCTTTAGGCTTTCTCTTCCGGACTTCCCTTCAAAGTTCTGAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAGGGAATGCTTCGTTCTCCTCCCGATGTGGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGTGGGAGAACGAAGCATTCTCTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAAGGGAAGCTCTGAAGGGAAAGCCCAAAGTGGACAATATCTATTAGCAGTGGGCTTAGACGGTTACAGTAACGAACGAAAGTCAAGTTTATATGCTCGTGATTATCCTTATGTTATCTGTCAGGGATGGGAATGTGACGGATATAAGGACTTTAGTGTGAGCAATTCGTTTCTCTTTTGTAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGATCGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTAAGACTCTTTGTTCTTGGTTCTGCACCGTTTCGACGATAAGTTCAAAACTCGAGGTTGAAGAGTAGTTTTCAGGCTGCTTCCTATCTGTTAAAGTAGCTTAAAATACTTCCCTTTGCTCTCATGTAGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGGTATCGGTTTCTTATCTACCTGATTTCTGTAGCATTCTCTGCTCTGTTTTTTTCTTAATCCCCTGTACTTTTGATGCAATATAGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACCATACAAAAGTTATGGTTTTGAAGTTTAAGCGTTGACATGAACGAGACATCCAGGTTACCCGTCACGACATTTCTCTCGTGTGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTGATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACTCGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGCTTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTTGGCTGTTTGCTGCAGTTGTCGGTTCTGTTTTGATTAACCATTTTAAGAAAATTTTGAATTCTTGTGTTATATGGGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCCAATGGTCTATAGCTTTCAGTGATGGTATTTTTCGATTACAAGGCAAGACCCTTTGGTCTTTGTGAAAACCTCTCTATGATAGACGCGTTTTATAATATTGAGGGGAAGTCCTTGAAAGGAATGTCTAAAGATGACAATATCTGCTAGTGATGAGCTTGACCTGTTACAAATGGTATTAGAGCTAGACACCG

mRNA sequence

ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTTGCCCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGATCGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACCATACAAAAGTTATGGTTTTGAAGTTTAAGCGTTGACATGAACGAGACATCCAGGTTACCCGTCACGACATTTCTCTCGTGTGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTGATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACTCGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGCTTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTTGGCTGTTTGCTGCAGTTGTCGGTTCTGTTTTGATTAACCATTTTAAGAAAATTTTGAATTCTTGTGTTATATGGGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCCAATGGTCTATAGCTTTCAGTGATGGTATTTTTCGATTACAAGGCAAGACCCTTTGGTCTTTGTGAAAACCTCTCTATGATAGACGCGTTTTATAATATTGAGGGGAAGTCCTTGAAAGGAATGTCTAAAGATGACAATATCTGCTAGTGATGAGCTTGACCTGTTACAAATGGTATTAGAGCTAGACACCG

Coding sequence (CDS)

ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGTCTGCGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCACCACCTCCCTAGTTTGCCCTACCGAAAATCTACTCCCTCTGCATCCCCTCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGTGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGATAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCCGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAACGAGGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTGTACGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGCGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTTGAGGAAATATATGTGATCGATTCAAAAACCAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAA

Protein sequence

MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

Homology

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BLAST of Carg20086 vs. NCBI nr
Match: KAG6591867.1 (PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024734.1 hypothetical protein SDJN02_13552, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 680.2 bits (1754), Expect = 8.8e-192
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338

[Close]

BLAST of Carg20086 vs. NCBI nr
Match: XP_022935749.1 (uncharacterized protein LOC111442572 [Cucurbita moschata])

HSP 1 Score: 671.4 bits (1731), Expect = 4.1e-189
Identity = 337/340 (99.12%), Postives = 337/340 (99.12%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSL YRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--AAAAAAAAAGSEGVGDENISI 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  AAAAAAAAAGSEGVGDENISI
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISI 120

Query: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180
           VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP
Sbjct: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180

Query: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240
           DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR
Sbjct: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240

Query: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300
           NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Sbjct: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300

Query: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 340

[Close]

BLAST of Carg20086 vs. NCBI nr
Match: XP_023534952.1 (uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671.0 bits (1730), Expect = 5.4e-189
Identity = 335/338 (99.11%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S PYRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338

[Close]

BLAST of Carg20086 vs. NCBI nr
Match: XP_022976812.1 (uncharacterized protein LOC111477076 [Cucurbita maxima])

HSP 1 Score: 666.4 bits (1718), Expect = 1.3e-187
Identity = 337/342 (98.54%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFR 60
           MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSLPYRKSTPSASPLFVPRRNPFR
Sbjct: 1   MNSTVFLLSSPLPLPPATIHRLRPPSISAASSLPHLPSLPYRKSTPSASPLFVPRRNPFR 60

Query: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--AAAAAAAAAGSEGVGDENI 120
           VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  AAAAAAAAAGSEGVGDENI
Sbjct: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENI 120

Query: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180
           SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT
Sbjct: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180

Query: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240
           PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH
Sbjct: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240

Query: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300
           FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Sbjct: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300

Query: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 342

[Close]

BLAST of Carg20086 vs. NCBI nr
Match: XP_008444205.1 (PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo])

HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-179
Identity = 322/338 (95.27%), Postives = 328/338 (97.04%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AAAAAAAAGS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AAAAAAAAGSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 337

[Close]

BLAST of Carg20086 vs. ExPASy Swiss-Prot
Match: Q9XI19 (PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC6 PE=1 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 1.6e-132
Identity = 225/277 (81.23%), Postives = 251/277 (90.61%), Query Frame = 0


Query: 62  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQS 121
           DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQS
Sbjct: 56  DDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQS 115

Query: 122 KSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTD 181
           KSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD
Sbjct: 116 KSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTD 175

Query: 182 VYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR 241
           +Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR
Sbjct: 176 IYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRR 235

Query: 242 LGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSS 301
             DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  
Sbjct: 236 TNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVG 295

Query: 302 ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 296 ERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328

[Close]

BLAST of Carg20086 vs. ExPASy TrEMBL
Match: A0A6J1F6A7 (uncharacterized protein LOC111442572 OS=Cucurbita moschata OX=3662 GN=LOC111442572 PE=4 SV=1)

HSP 1 Score: 671.4 bits (1731), Expect = 2.0e-189
Identity = 337/340 (99.12%), Postives = 337/340 (99.12%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSL YRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--AAAAAAAAAGSEGVGDENISI 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  AAAAAAAAAGSEGVGDENISI
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISI 120

Query: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180
           VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP
Sbjct: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180

Query: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240
           DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR
Sbjct: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240

Query: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300
           NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Sbjct: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300

Query: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 340

[Close]

BLAST of Carg20086 vs. ExPASy TrEMBL
Match: A0A6J1IGR4 (uncharacterized protein LOC111477076 OS=Cucurbita maxima OX=3661 GN=LOC111477076 PE=4 SV=1)

HSP 1 Score: 666.4 bits (1718), Expect = 6.4e-188
Identity = 337/342 (98.54%), Postives = 337/342 (98.54%), Query Frame = 0


Query: 1   MNSTVFLLSS--PLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFR 60
           MNSTVFLLSS  PLPPATIHRLRPPSISAASSL HLPSLPYRKSTPSASPLFVPRRNPFR
Sbjct: 1   MNSTVFLLSSPLPLPPATIHRLRPPSISAASSLPHLPSLPYRKSTPSASPLFVPRRNPFR 60

Query: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL--AAAAAAAAAGSEGVGDENI 120
           VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTL  AAAAAAAAAGSEGVGDENI
Sbjct: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENI 120

Query: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180
           SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT
Sbjct: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180

Query: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240
           PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH
Sbjct: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240

Query: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300
           FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Sbjct: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300

Query: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 342

[Close]

BLAST of Carg20086 vs. ExPASy TrEMBL
Match: A0A1S3BAM8 (uncharacterized protein LOC103487613 OS=Cucumis melo OX=3656 GN=LOC103487613 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.4e-180
Identity = 322/338 (95.27%), Postives = 328/338 (97.04%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AAAAAAAAGS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AAAAAAAAGSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 337

[Close]

BLAST of Carg20086 vs. ExPASy TrEMBL
Match: A0A5A7UA32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00090 PE=4 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.7e-178
Identity = 321/338 (94.97%), Postives = 327/338 (96.75%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SL HLPSLPYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AAAAAAAAGS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AAAAAAAAGSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNCF 337

[Close]

BLAST of Carg20086 vs. ExPASy TrEMBL
Match: A0A5J5BWI0 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002811 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 9.0e-142
Identity = 254/338 (75.15%), Postives = 289/338 (85.50%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60
           M +T+ L   PL P  +     P ++  +SLH  P+L +    P  + +F PR + FRV+
Sbjct: 1   MKATLLLSPPPLLPPKL-----PILTTVTSLHLTPTLTFPSLRPKLNYVFTPRPD-FRVW 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           +DDGD D GGPDDYDM ++E+EEVDNKKD+D+EYD LAAAAA+A  G    GD++I +V 
Sbjct: 61  ADDGDADGGGPDDYDMDEEEVEEVDNKKDYDVEYDPLAAAAASAGGGG---GDDDIEMVD 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSIQGWDSETIVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           D+YAIP+VLAP+PQKYIRCA+SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNR
Sbjct: 181 DIYAIPRVLAPIPQKYIRCAKSDYGCYNVTEPPIDAPRDPLYKSEMEISKVFLTKHYRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDR+ DLLV+RDNGNSFKIIHS
Sbjct: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRNRDRKGDLLVIRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           S+R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Sbjct: 301 SQREDPTTVIEREEWIKTRQDMERHLRKLRDFSVSNWF 329

[Close]

BLAST of Carg20086 vs. TAIR 10
Match: AT1G21600.1 (plastid transcriptionally active 6 )

HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-133
Identity = 225/277 (81.23%), Postives = 251/277 (90.61%), Query Frame = 0


Query: 62  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQS 121
           DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQS
Sbjct: 56  DDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQS 115

Query: 122 KSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTD 181
           KSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD
Sbjct: 116 KSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTD 175

Query: 182 VYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR 241
           +Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR
Sbjct: 176 IYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRR 235

Query: 242 LGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSS 301
             DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  
Sbjct: 236 TNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVG 295

Query: 302 ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 296 ERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328

[Close]

BLAST of Carg20086 vs. TAIR 10
Match: AT1G21600.2 (plastid transcriptionally active 6 )

HSP 1 Score: 473.8 bits (1218), Expect = 1.2e-133
Identity = 225/277 (81.23%), Postives = 251/277 (90.61%), Query Frame = 0


Query: 62  DDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQS 121
           DD D D GG D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQS
Sbjct: 56  DDVDADGGGADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQS 115

Query: 122 KSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTD 181
           KSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD
Sbjct: 116 KSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTD 175

Query: 182 VYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR 241
           +Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR
Sbjct: 176 IYSIPRVLAPMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRR 235

Query: 242 LGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSS 301
             DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  
Sbjct: 236 TNDPEFVLDLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVG 295

Query: 302 ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           ERDDPTTVIE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 296 ERDDPTTVIEREEWTKTREDMEKHLRKLRDFSVSNWF 328

The following BLAST results are available for this feature:

BLAST of Carg20086 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591867.1	8.8e-192	100.00	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita ar...	[more]
XP_022935749.1	4.1e-189	99.12	uncharacterized protein LOC111442572 [Cucurbita moschata]	[more]
XP_023534952.1	5.4e-189	99.11	uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo]	[more]
XP_022976812.1	1.3e-187	98.54	uncharacterized protein LOC111477076 [Cucurbita maxima]	[more]
XP_008444205.1	1.7e-179	95.27	PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]	[more]

BLAST of Carg20086 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI19	1.6e-132	81.23	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Carg20086 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6A7	2.0e-189	99.12	uncharacterized protein LOC111442572 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A6J1IGR4	6.4e-188	98.54	uncharacterized protein LOC111477076 OS=Cucurbita maxima OX=3661 GN=LOC111477076...	[more]
A0A1S3BAM8	8.4e-180	95.27	uncharacterized protein LOC103487613 OS=Cucumis melo OX=3656 GN=LOC103487613 PE=...	[more]
A0A5A7UA32	2.7e-178	94.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5J5BWI0	9.0e-142	75.15	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_002811 PE=4 SV=1	[more]

BLAST of Carg20086 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21600.1	1.2e-133	81.23	plastid transcriptionally active 6	[more]
AT1G21600.2	1.2e-133	81.23	plastid transcriptionally active 6	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044710	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6	PANTHER	PTHR35994	EXPRESSED PROTEIN	coord: 7..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20086-RA	Carg20086-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex