Carg20080 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg20080
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	F-box protein SKIP31-like
Location	Carg_Chr09: 3963355 .. 3967160 (+)
RNA-Seq Expression	Carg20080
Synteny	Carg20080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCCGATCGTTGCAGGAGTTTGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGTTTCTACCTCTTTCCTCTCTCTATTTCTCCGATATTCTTTGTGGAGTTGGAGCGGTTGGTATTTAGGAGAATTAAGGCGTATCGTTCAAACATGTTCGTTTGTTTCTTCAAATCTTATCATGTTCATGCCGATTTTGGGTGAACTACGTCGGATGGTGATGAATTTGAGTGCGGATATTTGTAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGTATTGTGAAGAGGAGTTATTTTTTCCTACTTCGTATGCTCCCTCCCCATTTCTGTTCTCACTGAACTGTTTGTTTTGATGCAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTGTAAGTAATTGCTTTTGATATTTCTCTATCTATCTGTGTTTGATCTGTACACTACTCTATGGCGAAAAGTTAATTGATTTCCCATTTTCTACGAACACTTAAGCCTGCAATTCGTGTACAGATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGGTTCTTCTTTCACCCTTTGTTAAGAAATGATCCTAAATCCTGTTATTTGAAATAGAAGAAATGGTTCTGAATTCATTATCCTGTTTGAAACGGAAAAGATTTGAAGAAATGAGAGCAATTACATTATTTTTGTTAGGAAAACAAAATAAGAACTTCACTACTTCACTAATATAGGCTTCTAAACTAGCTCCATTGAAAGAAAATAAAATTAGCACCACCGAAGACATTGTTAAAATACTTTTACGAGAAGGTTCTATTGAAAACATAAGGAAACATAGGGAAAACAACAAGGATTTTTGGGTTTTAACCCTACAAACATAGGGAAAACAACAAGGATTTTTGGGTTTTAACCCTACAAACATAGAAGAAATAGGAAAGGATCATATGAAATGATTTTAAATTTAAAACGGATCAGTGGACTCTATTCTAATATCAACAAATTCCTAGAACTTTAAGTGGAATGGGCATTGTAGTTCTTTCTACTTCTTGGGGTATAATGACAGATCGAGAAGCCCGACTATAGGGAATCGGCAGAGGCGGAGAAATTTTGTATCTGTTGAAAGAAAATTAAGATATGATAAGTTTAAATGAATGATTTACTCAAAATTATAGGAAATCTAACACACAACAAAATCTGTTAAGATTTAAGAGCTTTATACATCATTCTATGGGTTCCTGCCTGCGGTTGTATATTCATTTTTTGTTTAGGGCTCTGACTGTTTTGTTAGTTGGTTTTATACCCATCTTAGTGATGAACACTCATCACCCATTTTTGCTATCACCTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGTCTGATTTTCTCACAAGCTTTTAACGCTGCAAAAGAATCGCCCATATAGTTTCGGTTTCTATATTCTCGTGTTTAGAGATAGGGTTGAATGATAGTTCATGCAAGGTTTTCTTGGAACCCAACATATAGTTTTGTTTTCTGGTTTTGTCCTTGGCTATCTCCCTCCTTAGTCTCTACTAATTCTATTTTTCTGGTAACTAAAGAAAAAAACTATTGAGCGTTCGCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGGTAAGATATTCTTCTATCTTTTATATCCATTTTTTGTTGTAGATTGCCCTGTGACTTTAGTACCTGTGTAATTGATGAGTCGCACGTTTTTTTCCCCTAGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGTGAGTACAACCTTCCTTCATTTGTTACCAACCTTGACTTGTCTGCTCATCCTTCTGCTATCTAACACTCTTTAACTTCATATCCGAGGGCTCCCGGCTCTCTACTGAAAATAGAGCGAGACTATAAATGGGCTCTTTTAATACTAATACTGTAACGGCCCAAGTCCACCACTAGCTGATATTGTCTGTTTTTGCTTGTTACATATCGTCGTCAACCTCACGGTTTTAAAATGCGTCTACTATTGAGAGGATCTAGTCCTACTCCGACCAATACCCCACTCCATATGGTGACTGGGTTTGATACCATTTATAACCACTCAAGCTTATCGCTAGTAGATATTGTCCGCTTTGGCCCGTTACGTGTCGTCGTCAGCTTCACAGTTTTAAAACGCGTTAACTATGAAGAGGTTTCCATGCCCTTATAAAGAAGTTTTGTTTCCCTCTCCAACTGACGTGGGATATTACAATCCACCCCTTTGGGCCTAGCGTCCTCGCTGGCACATCGCTCGATGTCTGGCTCTGATACCATTTGTAATTGTCCAAGCTCACCGCTAGTAGATATCTGTCCATTTTGACCTGTTATGTGTAGCCGTTAGCTTCACGGTTTTATAACGCGTCAACTAGGGAAAGGTTTTTACACCCTTATAAAGAAGTTTTGTTCCAATCTCCAACCGACGTGGGATCTCACAAATTATGTAATAAATTGAGCTTGTATTTCTACAAATGGCACTTCAAACTTGAGACGAGCATGAATAAATTGATGATACTGTATATTGTACAAAGGTTCTTATCTGACCCCTTCATGCATTTTTATGTCATGATAGATTTTTGTTCACCTCATTTAATATACGTCGAACTTGTAGGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGGTATAAAATCACGATCTATCCGTTGTTTATATTTTAGTAAACACATGTTTTTTCTTTTTTCAGTAGAACAATTGAACTATGTTCATGTTGTCGAAGAACGCACGTTTTTAACTCATCTTAATATACAACAGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCGTGGATTATATTCGTGAATTTCATCATGTGTAGAAGTTTGTTAATTAGGTAATATATATCTTTATATATATATATATATATATCTTTTTGTCAGCTTTCTTCCATTCCAAACCTCTCTTTCTCTCTCTTAATCATTTGAAAGAGTTATGTT

mRNA sequence

CCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCCGATCGTTGCAGGAGTTTGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCGTGGATTATATTCGTGAATTTCATCATGTGTAGAAGTTTGTTAATTAGGTAATATATATCTTTATATATATATATATATATATCTTTTTGTCAGCTTTCTTCCATTCCAAACCTCTCTTTCTCTCTCTTAATCATTTGAAAGAGTTATGTT

Coding sequence (CDS)

ATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGA

Protein sequence

MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSSSQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC

Homology

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BLAST of Carg20080 vs. NCBI nr
Match: KAG7024728.1 (F-box protein SKIP31 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 650.2 bits (1676), Expect = 9.4e-183
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_022936479.1 (F-box protein SKIP31-like [Cucurbita moschata])

HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179
Identity = 319/324 (98.46%), Postives = 321/324 (99.07%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRI+TGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIDTGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSME DTELQQAGVTDEAE EPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEREPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_023534955.1 (F-box protein SKIP31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.0 bits (1647), Expect = 2.2e-179
Identity = 319/324 (98.46%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVL EVSDKEEGN QEEPQPKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRIETGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSME DTELQQAGVTDEAEAEPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: KAG6591864.1 (F-box protein SKIP31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 636.7 bits (1641), Expect = 1.1e-178
Identity = 316/320 (98.75%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 5   DEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSSSQFS 64
           DEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREV SV+TSSSQFS
Sbjct: 49  DEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVASVSTSSSQFS 108

Query: 65  GVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRW 124
           GVVPGRI+TGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRW
Sbjct: 109 GVVPGRIDTGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRW 168

Query: 125 GLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQD 184
           GLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQD
Sbjct: 169 GLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQD 228

Query: 185 DQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDT 244
           DQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDT
Sbjct: 229 DQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDT 288

Query: 245 CREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGRFARA 304
           CREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGRFARA
Sbjct: 289 CREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGRFARA 348

Query: 305 YLLGYNCADEAELEATLRFC 325
           YLLGYNCADEAELEATLRFC
Sbjct: 349 YLLGYNCADEAELEATLRFC 368

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_038896910.1 (F-box protein SKIP31 isoform X1 [Benincasa hispida])

HSP 1 Score: 600.1 bits (1546), Expect = 1.1e-167
Identity = 299/324 (92.28%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DEEDE LAQFLE+EVLSEVSDKEEGNAQEEP+ KRARIEQI+PNEQREV SVT SS
Sbjct: 1   MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKAKRARIEQISPNEQREVVSVTNSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIETGIFS+IP ELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLW RLY
Sbjct: 61  SQSKGVVPGRIETGIFSKIPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWHRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGL+P TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVCRISGHCFDTLL PDSME DTE QQ GVTD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNC DEAELEATLRFC
Sbjct: 301 FARAYLLGYNCVDEAELEATLRFC 322

[Close]

BLAST of Carg20080 vs. ExPASy Swiss-Prot
Match: Q9FHK0 (F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 8.7e-99
Identity = 186/324 (57.41%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M++SDEEDE  A+FLE+EV S V DKEE    +EP+ KR RIE+    +  E       +
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK-GETKALEKDEDQKEN 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
                    RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRLY
Sbjct: 61  GNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           C+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPS
Sbjct: 121 CIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++TG VHV
Sbjct: 181 QMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE F    R
Sbjct: 241 CDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of Carg20080 vs. ExPASy Swiss-Prot
Match: Q6NZ03 (F-box/SPRY domain-containing protein 1 OS=Danio rerio OX=7955 GN=fbxo45 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 8.1e-04
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 73  TGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDES--LWRRLYCLR 124
           +GI  R+PS +  HI  +L   DL++CSLVC   N+  SDE+  +WR L C R
Sbjct: 39  SGIAGRLPSRVLEHIFSYLELMDLLNCSLVCWHWNNCLSDENSEVWRSL-CAR 90

[Close]

BLAST of Carg20080 vs. ExPASy TrEMBL
Match: A0A6J1F8E8 (F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111443086 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.1e-180
Identity = 319/324 (98.46%), Postives = 321/324 (99.07%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRI+TGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIDTGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSME DTELQQAGVTDEAE EPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEREPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. ExPASy TrEMBL
Match: A0A6J1ISU8 (F-box protein SKIP31-like OS=Cucurbita maxima OX=3661 GN=LOC111480297 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 6.6e-166
Identity = 293/326 (89.88%), Postives = 308/326 (94.48%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTT-- 60
           M+I DEEDE LAQF+E+EVLSEVSDKEEGN +EEP+PKRARIEQINPNEQREV SVTT  
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSF 60

Query: 61  SSSQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRR 120
           S SQ  GVVPGRIETGIFS++P ELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPLELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVS+WKSS+GL DKIVIDHTCSGETCTYYQ+GDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGS 300
           HVCDDTCREV+MDP+DEQLVCRISGHCFD LL PDSME D+E Q AGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 325
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of Carg20080 vs. ExPASy TrEMBL
Match: A0A6J1FLL4 (F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111446341 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.1e-165
Identity = 293/326 (89.88%), Postives = 308/326 (94.48%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M+I DEEDE LAQF+E+EVLSEVSDKEEGN +EEP+PKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSS 60

Query: 61  --SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRR 120
             SQ  GVVPGRIETGIFS++P ELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPVTKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVS+WKSS+GL DKIVIDHTCSGETCTYYQ+GDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGS 300
           HVCDDTCREV+MDP+DEQLVCRISGHCFD LL PDS E D+E Q AGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSTEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 325
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of Carg20080 vs. ExPASy TrEMBL
Match: A0A1S3B9V0 (F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.5e-165
Identity = 292/324 (90.12%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DE+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+ME DTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg20080 vs. ExPASy TrEMBL
Match: A0A1S3B9Y3 (F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.8e-163
Identity = 290/324 (89.51%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DE+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
             QDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 --QDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+ME DTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 320

[Close]

BLAST of Carg20080 vs. TAIR 10
Match: AT5G45360.1 (F-box family protein )

HSP 1 Score: 361.7 bits (927), Expect = 6.2e-100
Identity = 186/324 (57.41%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M++SDEEDE  A+FLE+EV S V DKEE    +EP+ KR RIE+    +  E       +
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK-GETKALEKDEDQKEN 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
                    RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRLY
Sbjct: 61  GNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           C+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPS
Sbjct: 121 CIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++TG VHV
Sbjct: 181 QMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE F    R
Sbjct: 241 CDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

The following BLAST results are available for this feature:

BLAST of Carg20080 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024728.1	9.4e-183	100.00	F-box protein SKIP31 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936479.1	1.3e-179	98.46	F-box protein SKIP31-like [Cucurbita moschata]	[more]
XP_023534955.1	2.2e-179	98.46	F-box protein SKIP31-like [Cucurbita pepo subsp. pepo]	[more]
KAG6591864.1	1.1e-178	98.75	F-box protein SKIP31, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038896910.1	1.1e-167	92.28	F-box protein SKIP31 isoform X1 [Benincasa hispida]	[more]

BLAST of Carg20080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHK0	8.7e-99	57.41	F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1	[more]
Q6NZ03	8.1e-04	45.28	F-box/SPRY domain-containing protein 1 OS=Danio rerio OX=7955 GN=fbxo45 PE=2 SV=...	[more]

BLAST of Carg20080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8E8	6.1e-180	98.46	F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111443086 PE=4 SV=...	[more]
A0A6J1ISU8	6.6e-166	89.88	F-box protein SKIP31-like OS=Cucurbita maxima OX=3661 GN=LOC111480297 PE=4 SV=1	[more]
A0A6J1FLL4	1.1e-165	89.88	F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111446341 PE=4 SV=...	[more]
A0A1S3B9V0	2.5e-165	90.12	F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
A0A1S3B9Y3	6.8e-163	89.51	F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]

BLAST of Carg20080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45360.1	6.2e-100	57.41	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 79..119 e-value: 5.5E-7 score: 39.2
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 77..121 e-value: 8.4E-12 score: 44.8
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 73..119 score: 14.822844
None	No IPR available	GENE3D	1.20.1280.50		coord: 62..151 e-value: 1.8E-16 score: 61.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	PANTHER	PTHR46550	F-BOX ONLY PROTEIN 3	coord: 66..265 coord: 266..324
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 61..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20080-RA	Carg20080-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0042981	regulation of apoptotic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0005515	protein binding