Carg19946 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19946
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein TIFY 5A-like
Location	Carg_Chr13: 6678306 .. 6678815 (-)
RNA-Seq Expression	Carg19946
Synteny	Carg19946

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCTTCCCATTTCCATGGAGCAAAACTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAGTTCTTGTAAGTTTCTGCTTCTTATCATCTCTGTTTCTCTTTGAATGTTTGTATGTCTGTGAAAGTGTATTGATTTTGGGTTGTTCTTTATGGCAGGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACTATTTTCTACAATGGGAGAGTTTGTGTTGCGGATTTTACAGAGGATCAAGCTAGAGCTATAATAACGCTTGCAACAAGACATGTAGAGGAGCGATCGATTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCGGAGCAGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTACAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAG

mRNA sequence

ATGGCGGTTCTTCCCATTTCCATGGAGCAAAACTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAGTTCTTGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACTATTTTCTACAATGGGAGAGTTTGTGTTGCGGATTTTACAGAGGATCAAGCTAGAGCTATAATAACGCTTGCAACAAGACATGTAGAGGAGCGATCGATTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCGGAGCAGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTACAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAG

Coding sequence (CDS)

ATGGCGGTTCTTCCCATTTCCATGGAGCAAAACTGCAACTTGGAGCTTCGTCTCTCTCCTTCTACGTCTTTCTCCGATCAAGATTCCGGCGACCACCGCCACCACCAGCCTCGTCTCCACCAGTTCTTGGATGATGAATCGAGCAAAAATTCTCAGCAGCAGATGACTATTTTCTACAATGGGAGAGTTTGTGTTGCGGATTTTACAGAGGATCAAGCTAGAGCTATAATAACGCTTGCAACAAGACATGTAGAGGAGCGATCGATTAATCGTCGCCGGAAATTGGAACGGTCGATGTCGCCGGAGCAGTGTAATGGTGAAGGTGGTTCTGGTTCTGGGCTGTCCATGAAGAGATCTTTGCAGAGGTTTTTACAGAAAAGGAAGAATCGGGTTCAATCTGCTTCACCTTACAATCATTAG

Protein sequence

MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSLQRFLQKRKNRVQSASPYNH

Homology

[Close]

BLAST of Carg19946 vs. NCBI nr
Match: KAG6583892.1 (Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019510.1 Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273.5 bits (698), Expect = 1.0e-69
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. NCBI nr
Match: XP_022927242.1 (protein TIFY 5A-like [Cucurbita moschata])

HSP 1 Score: 271.2 bits (692), Expect = 5.1e-69
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCVADFTEDQARAII LATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVADFTEDQARAIIMLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. NCBI nr
Match: XP_023520178.1 (protein TIFY 5A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.8 bits (678), Expect = 2.1e-67
Identity = 134/139 (96.40%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           MAVLPISMEQ+CNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MAVLPISMEQSCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCV DFTEDQARAII LATRHVEERS+NRRRKLERSMSPE+CNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVGDFTEDQARAIIMLATRHVEERSVNRRRKLERSMSPERCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. NCBI nr
Match: XP_023001485.1 (protein TIFY 5A-like [Cucurbita maxima])

HSP 1 Score: 260.4 bits (664), Expect = 9.0e-66
Identity = 134/139 (96.40%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           M VLPISMEQNCNLELRLSPSTSFSDQDSGD R HQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MVVLPISMEQNCNLELRLSPSTSFSDQDSGDRRRHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCVADFTEDQARAII LATRHVEERSINR RKLERSMSPEQCNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVADFTEDQARAIIMLATRHVEERSINRCRKLERSMSPEQCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. NCBI nr
Match: XP_038896063.1 (protein TIFY 5A-like [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 5.6e-52
Identity = 117/144 (81.25%), Postives = 125/144 (86.81%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTS--FSDQDSGDHR-HHQPRLHQFLDDESSKNSQQQMTI 60
           MAVLPISMEQNCNLELRLSPS+S  +    S DHR HH P LHQFLDDE +KNSQQQMTI
Sbjct: 1   MAVLPISMEQNCNLELRLSPSSSTFYPHNHSDDHRHHHHPHLHQFLDDEFNKNSQQQMTI 60

Query: 61  FYNGRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGE--GGSGSGLS 120
           FYNGRVCVADFTEDQA+AII LATRHVEERS N ++KLERS SPEQCN E   GSGSGLS
Sbjct: 61  FYNGRVCVADFTEDQAKAIIMLATRHVEERSKNPQQKLERSTSPEQCNVEAVSGSGSGLS 120

Query: 121 MKRSLQRFLQKRKNRVQSASPYNH 140
           MKRSLQRFLQKRKNR+QSASPY+H
Sbjct: 121 MKRSLQRFLQKRKNRIQSASPYHH 144

[Close]

BLAST of Carg19946 vs. ExPASy Swiss-Prot
Match: O64687 (Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 55/140 (39.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 6   ISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESS------KNSQQQMTIFY 65
           + M+  C+LELRL  S+  SD             H  LD+ SS      K   Q +TIFY
Sbjct: 18  MEMQTKCDLELRLLTSSYDSD------------FHSSLDESSSSEISQPKQESQILTIFY 77

Query: 66  NGRVCV-ADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKR 125
           NG +CV +D T  +A AI++LA+R VEE+S++ R            N         SMKR
Sbjct: 78  NGHMCVSSDLTHLEANAILSLASRDVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASMKR 137

Query: 126 SLQRFLQKRKNRVQSASPYN 139
           SL  FLQKR  R+Q+ SPY+
Sbjct: 138 SLHSFLQKRSLRIQATSPYH 145

[Close]

BLAST of Carg19946 vs. ExPASy Swiss-Prot
Match: Q8LBM2 (Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 7.7e-12
Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 6   ISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQ-----QQMTIFYN 65
           + ++QNC+LELRL P TS+ D DS D           ++  SS N Q     Q++TIFYN
Sbjct: 1   MKLQQNCDLELRLFP-TSY-DSDSSD-------TTSVVESTSSGNPQPNEESQRITIFYN 60

Query: 66  GRVCV-ADFTEDQARAIITLATRHVEERSI-------NRRRKLERSMSPEQCNGEGGSGS 125
           G++C  +D T  QAR+II++A+R ++ +S        N+      +  P           
Sbjct: 61  GKMCFSSDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLP---------NP 120

Query: 126 GLSMKRSLQRFLQKRKNRVQSASPYN 139
             SMK+SLQ FLQKRK R+Q+ SPY+
Sbjct: 121 KASMKKSLQSFLQKRKIRIQATSPYH 128

[Close]

BLAST of Carg19946 vs. ExPASy Swiss-Prot
Match: A2XSX6 (Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 55  MTIFYNGRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGL 114
           MT+FYNG V V D + D+A AI+ +AT   + + + R   +  + + E           L
Sbjct: 87  MTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKEP----------L 146

Query: 115 SMKRSLQRFLQKRKNRVQSASPY 138
           +  +SLQRFL KRK R+ S  PY
Sbjct: 147 TRTKSLQRFLSKRKERLTSLGPY 159

[Close]

BLAST of Carg19946 vs. ExPASy Swiss-Prot
Match: Q7XV97 (Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.9e-06
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 55  MTIFYNGRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGL 114
           MT+FYNG V V D + D+A AI+ +AT   + + + R   +  + + E           L
Sbjct: 87  MTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKEP----------L 146

Query: 115 SMKRSLQRFLQKRKNRVQSASPY 138
           +  +SLQRFL KRK R+ S  PY
Sbjct: 147 TRTKSLQRFLSKRKERLTSLGPY 159

[Close]

BLAST of Carg19946 vs. ExPASy Swiss-Prot
Match: F4J078 (Protein JAZ13 OS=Arabidopsis thaliana OX=3702 GN=JAZ13 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.0e-04
Identity = 39/124 (31.45%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 10  QNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVADFT 69
           + C+L+L LSP  S       D           ++D SS    +++  FY+GR+   D  
Sbjct: 2   KGCSLDLHLSPMASTLQSCHQD---------STVNDRSSTIRSKEINAFYSGRLSEYDLV 61

Query: 70  EDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSLQRFLQKRKN 129
           E Q RAII +A++  E  ++         + P +      S  G S+KRS++RFL+KRK 
Sbjct: 62  EIQMRAIIEMASKDREVTAL--------ELVPVRLE----SPLGCSVKRSVKRFLEKRKK 104

Query: 130 RVQS 134
           R +S
Sbjct: 122 RSKS 104

[Close]

BLAST of Carg19946 vs. ExPASy TrEMBL
Match: A0A6J1EGL8 (protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111434148 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.5e-69
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCVADFTEDQARAII LATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVADFTEDQARAIIMLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. ExPASy TrEMBL
Match: A0A6J1KLB7 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111495608 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.3e-66
Identity = 134/139 (96.40%), Postives = 134/139 (96.40%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           M VLPISMEQNCNLELRLSPSTSFSDQDSGD R HQPRLHQFLDDESSKNSQQQMTIFYN
Sbjct: 1   MVVLPISMEQNCNLELRLSPSTSFSDQDSGDRRRHQPRLHQFLDDESSKNSQQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSL 120
           GRVCVADFTEDQARAII LATRHVEERSINR RKLERSMSPEQCNGEGGSGSGLSMKRSL
Sbjct: 61  GRVCVADFTEDQARAIIMLATRHVEERSINRCRKLERSMSPEQCNGEGGSGSGLSMKRSL 120

Query: 121 QRFLQKRKNRVQSASPYNH 140
           QRFLQKRKNRVQSASPYNH
Sbjct: 121 QRFLQKRKNRVQSASPYNH 139

[Close]

BLAST of Carg19946 vs. ExPASy TrEMBL
Match: A0A0A0LXJ5 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G435720 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 5.2e-43
Identity = 103/150 (68.67%), Postives = 115/150 (76.67%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFL--DDESSKNSQQQMTIF 60
           MA+LP+S++ NCNLELRLSPS+S        H HH P LH FL  DDE +KNS QQMTIF
Sbjct: 1   MALLPVSIDHNCNLELRLSPSSSTFLSHPLPHSHHHPPLHHFLDDDDECNKNSHQQMTIF 60

Query: 61  YNGRVCVADFTEDQARAIITLATRHVEERSINRRRKLER-SMSPEQCNGE--------GG 120
           YNGRVCVADFTEDQA+AII LA+R VE+RS N   KLER S SP+QC+ E         G
Sbjct: 61  YNGRVCVADFTEDQAKAIIMLASRQVEDRSTNPEHKLERPSTSPDQCHREPVSLSVSGSG 120

Query: 121 SGSGLSMKRSLQRFLQKRKNRVQSASPYNH 140
           SGSGLSMKRSLQRFLQKRKNR+QSASPYNH
Sbjct: 121 SGSGLSMKRSLQRFLQKRKNRIQSASPYNH 150

[Close]

BLAST of Carg19946 vs. ExPASy TrEMBL
Match: A0A6J1CDV5 (protein TIFY 5A OS=Momordica charantia OX=3673 GN=LOC111010646 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.3e-42
Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYN 60
           MAVLP+SME+NCNLELRLSPSTSFS  DSGD    QPRLH FL +ESSKN  QQMTIFYN
Sbjct: 1   MAVLPVSMERNCNLELRLSPSTSFSGHDSGD---QQPRLHHFLGEESSKN-PQQMTIFYN 60

Query: 61  GRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSG--SGLSMKR 120
           GRVCV DFTE+QARAII LATRH +E     RR+     SPEQ N   G+G  SG+SMK+
Sbjct: 61  GRVCVGDFTEEQARAIIMLATRHTKEEKTTCRRQTLEPSSPEQTNSGAGAGSVSGISMKK 120

Query: 121 SLQRFLQKRKNRVQSASPYNH 140
           SLQRFLQKRK+R+QSASPY+H
Sbjct: 121 SLQRFLQKRKHRIQSASPYHH 137

[Close]

BLAST of Carg19946 vs. ExPASy TrEMBL
Match: A0A6J1JX98 (protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111490502 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.3e-41
Identity = 102/138 (73.91%), Postives = 108/138 (78.26%), Query Frame = 0


Query: 1   MAVLPISMEQNCNLELRLSPST-SFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFY 60
           MAVLPI ME+NCNLEL LS S+ + SD DSGD R H P LHQFLDDESSKNS QQMTIFY
Sbjct: 1   MAVLPIFMEKNCNLELCLSSSSMASSDHDSGDLRRHHPSLHQFLDDESSKNSHQQMTIFY 60

Query: 61  NGRVCVADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRS 120
           NGRVCVADFTEDQARAII LATR    RS +RR +       E C  EGGS SGLSMKRS
Sbjct: 61  NGRVCVADFTEDQARAIIMLATR----RSTSRRHR------SEPCKREGGSDSGLSMKRS 120

Query: 121 LQRFLQKRKNRVQSASPY 138
           LQRFL KRKNR+QSASPY
Sbjct: 121 LQRFLHKRKNRIQSASPY 128

[Close]

BLAST of Carg19946 vs. TAIR 10
Match: AT2G34600.1 (jasmonate-zim-domain protein 7 )

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 55/140 (39.29%), Postives = 73/140 (52.14%), Query Frame = 0


Query: 6   ISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESS------KNSQQQMTIFY 65
           + M+  C+LELRL  S+  SD             H  LD+ SS      K   Q +TIFY
Sbjct: 18  MEMQTKCDLELRLLTSSYDSD------------FHSSLDESSSSEISQPKQESQILTIFY 77

Query: 66  NGRVCV-ADFTEDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKR 125
           NG +CV +D T  +A AI++LA+R VEE+S++ R            N         SMKR
Sbjct: 78  NGHMCVSSDLTHLEANAILSLASRDVEEKSLSLRSSDGSDPPTIPNNSTRFHYQKASMKR 137

Query: 126 SLQRFLQKRKNRVQSASPYN 139
           SL  FLQKR  R+Q+ SPY+
Sbjct: 138 SLHSFLQKRSLRIQATSPYH 145

[Close]

BLAST of Carg19946 vs. TAIR 10
Match: AT1G30135.1 (jasmonate-zim-domain protein 8 )

HSP 1 Score: 71.6 bits (174), Expect = 5.5e-13
Identity = 56/146 (38.36%), Postives = 81/146 (55.48%), Query Frame = 0


Query: 6   ISMEQNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQ-----QQMTIFYN 65
           + ++QNC+LELRL P TS+ D DS D           ++  SS N Q     Q++TIFYN
Sbjct: 1   MKLQQNCDLELRLFP-TSY-DSDSSD-------TTSVVESTSSGNPQPNEESQRITIFYN 60

Query: 66  GRVCV-ADFTEDQARAIITLATRHVEERSI-------NRRRKLERSMSPEQCNGEGGSGS 125
           G++C  +D T  QAR+II++A+R ++ +S        N+      +  P           
Sbjct: 61  GKMCFSSDVTHLQARSIISIASREMKTKSSSNGSDPPNKSTSFHHNQLP---------NP 120

Query: 126 GLSMKRSLQRFLQKRKNRVQSASPYN 139
             SMK+SLQ FLQKRK R+Q+ SPY+
Sbjct: 121 KASMKKSLQSFLQKRKIRIQATSPYH 128

[Close]

BLAST of Carg19946 vs. TAIR 10
Match: AT3G22275.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 39/124 (31.45%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 10  QNCNLELRLSPSTSFSDQDSGDHRHHQPRLHQFLDDESSKNSQQQMTIFYNGRVCVADFT 69
           + C+L+L LSP  S       D           ++D SS    +++  FY+GR+   D  
Sbjct: 2   KGCSLDLHLSPMASTLQSCHQD---------STVNDRSSTIRSKEINAFYSGRLSEYDLV 61

Query: 70  EDQARAIITLATRHVEERSINRRRKLERSMSPEQCNGEGGSGSGLSMKRSLQRFLQKRKN 129
           E Q RAII +A++  E  ++         + P +      S  G S+KRS++RFL+KRK 
Sbjct: 62  EIQMRAIIEMASKDREVTAL--------ELVPVRLE----SPLGCSVKRSVKRFLEKRKK 104

Query: 130 RVQS 134
           R +S
Sbjct: 122 RSKS 104

[Close]

BLAST of Carg19946 vs. TAIR 10
Match: AT5G13220.1 (jasmonate-zim-domain protein 10 )

HSP 1 Score: 41.6 bits (96), Expect = 6.1e-04
Identity = 28/88 (31.82%), Postives = 45/88 (51.14%), Query Frame = 0


Query: 55  MTIFYNGRVCVADFTEDQARAIITLATRHVEERSINRRRK-----LERSMSPEQCNGEGG 114
           MTIFYNG V V   + ++A  I+ +A     ++  +         L  ++ P+       
Sbjct: 105 MTIFYNGSVSVFQVSRNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLE 164

Query: 115 SGSGLSMKRSLQRFLQKRKNRVQSASPY 138
               ++ ++SLQRFL+KRK R+ S SPY
Sbjct: 165 GDLPIARRKSLQRFLEKRKERLVSTSPY 192

The following BLAST results are available for this feature:

BLAST of Carg19946 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583892.1	1.0e-69	100.00	Protein TIFY 5A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019510.1 P...	[more]
XP_022927242.1	5.1e-69	99.28	protein TIFY 5A-like [Cucurbita moschata]	[more]
XP_023520178.1	2.1e-67	96.40	protein TIFY 5A-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001485.1	9.0e-66	96.40	protein TIFY 5A-like [Cucurbita maxima]	[more]
XP_038896063.1	5.6e-52	81.25	protein TIFY 5A-like [Benincasa hispida]	[more]

BLAST of Carg19946 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64687	1.6e-12	39.29	Protein TIFY 5B OS=Arabidopsis thaliana OX=3702 GN=TIFY 5B PE=1 SV=1	[more]
Q8LBM2	7.7e-12	38.36	Protein TIFY 5A OS=Arabidopsis thaliana OX=3702 GN=TIFY5A PE=1 SV=1	[more]
A2XSX6	4.9e-06	37.35	Protein TIFY 9 OS=Oryza sativa subsp. indica OX=39946 GN=TIFY9 PE=3 SV=1	[more]
Q7XV97	4.9e-06	37.35	Protein TIFY 9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY9 PE=1 SV=1	[more]
F4J078	2.0e-04	31.45	Protein JAZ13 OS=Arabidopsis thaliana OX=3702 GN=JAZ13 PE=1 SV=1	[more]

BLAST of Carg19946 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGL8	2.5e-69	99.28	protein TIFY 5A-like OS=Cucurbita moschata OX=3662 GN=LOC111434148 PE=3 SV=1	[more]
A0A6J1KLB7	4.3e-66	96.40	protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111495608 PE=3 SV=1	[more]
A0A0A0LXJ5	5.2e-43	68.67	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G435720 PE=3 S...	[more]
A0A6J1CDV5	3.3e-42	70.92	protein TIFY 5A OS=Momordica charantia OX=3673 GN=LOC111010646 PE=3 SV=1	[more]
A0A6J1JX98	6.3e-41	73.91	protein TIFY 5A-like OS=Cucurbita maxima OX=3661 GN=LOC111490502 PE=3 SV=1	[more]

BLAST of Carg19946 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34600.1	1.1e-13	39.29	jasmonate-zim-domain protein 7	[more]
AT1G30135.1	5.5e-13	38.36	jasmonate-zim-domain protein 8	[more]
AT3G22275.1	1.5e-05	31.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G13220.1	6.1e-04	31.82	jasmonate-zim-domain protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 48..82 e-value: 3.0E-9 score: 46.7
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 51..80 e-value: 5.5E-15 score: 54.4
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 48..82 score: 12.479677
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	Jas_motif	coord: 117..137 e-value: 8.3E-10 score: 38.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..51
None	No IPR available	PANTHER	PTHR33077:SF17	PROTEIN TIFY 5B	coord: 8..137
IPR040390	TIFY/JAZ family	PANTHER	PTHR33077	PROTEIN TIFY 4A-RELATED-RELATED	coord: 8..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19946-RA	Carg19946-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus