Carg19929 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAATTACGGAAAAGCCCTCCGTCGAACACCAAATTTGCGATGCCACCGATCATGCCACGAAACCGTCATTGTATACACCAGAAACCGTTACAGAGCTCTTTCTCCCAGGTTTCTTCTTGTGAAGAGTATCTCTATGGACGAAGAAGTGGGTGCGAAGAGAAGCAAGGGGCATGGGAGCAGCGCTACGATGTGGGCGATTTTCAAGCGATCGCTGAGGAGAGAGTCGCGCAAAATGAAGCTATTGGGGTCGGCATTCAAGTGGAAGAGACTGACGAATTTGCAGATTTCATTTATGGATAATTTGCTTTTCAAGATTGTGTCTATGTTGGAGGGTGTAGTTCTTGTCGCTACACTCTGTTTCTTCTTTCTCTGTTTTGGATGTCACTTTTGAACTTAGATTCCGCTTGTTTCTCTCTTTTTCCCCTGTTTTCTGTAATTATTTGTGGATATTTCTGTTTGTTTCTTATTTCTTCAATGATCTGTAAGAATTTGGGTTATGAGGGTTAGTTCGGGTTTGGATTGTGATATCTGGAGGGGAAGAGCTTGGGTTTGTGTAGCTCTGTAAAACTCTAGATGAATGAACATTTTGAGCTTCATCTTTGTTGGCCATGGAGTTGGTTTCTCGCTGTTGATGGAGGTAGAAGAAATGGCCGACAGTATACCCGTTTGCCTCATTTTGACCGGAAAACTCCATGGTTATATGGTTTGTGTGGTGGATGGTTGGGAGTGTTGGATGATGAAAGTCCCAGGTCCACTCAATTTAGGAAATGA ATGACAAATTACGGAAAAGCCCTCCGTCGAACACCAAATTTGCGATGCCACCGATCATGCCACGAAACCGTCATTGTATACACCAGAAACCGTTACAGAGCTCTTTCTCCCAGGTTTCTTCTTGTGAAGAGTATCTCTATGGACGAAGAAGTGGGTGCGAAGAGAAGCAAGGGGCATGGGAGCAGCGCTACGATGTGGGCGATTTTCAAGCGATCGCTGAGGAGAGAGTCGCGCAAAATGAAGCTATTGGGGTCGGCATTCAAGTGGAAGAGACTGACGAATTTGCAGATTTCATTTATGGATAATTTGCTTTTCAAGATTGTGTCTATGTTGGAGGGTGTAGTTCTTATGAATGAACATTTTGAGCTTCATCTTTGTTGGCCATGGAGTTGGTTTCTCGCTGTTGATGGAGGTAGAAGAAATGGCCGACAGTATACCCGTTTGCCTCATTTTGACCGGAAAACTCCATGGTTATATGGTTTGTGTGGTGGATGGTTGGGAGTGTTGGATGATGAAAGTCCCAGGTCCACTCAATTTAGGAAATGA ATGACAAATTACGGAAAAGCCCTCCGTCGAACACCAAATTTGCGATGCCACCGATCATGCCACGAAACCGTCATTGTATACACCAGAAACCGTTACAGAGCTCTTTCTCCCAGGTTTCTTCTTGTGAAGAGTATCTCTATGGACGAAGAAGTGGGTGCGAAGAGAAGCAAGGGGCATGGGAGCAGCGCTACGATGTGGGCGATTTTCAAGCGATCGCTGAGGAGAGAGTCGCGCAAAATGAAGCTATTGGGGTCGGCATTCAAGTGGAAGAGACTGACGAATTTGCAGATTTCATTTATGGATAATTTGCTTTTCAAGATTGTGTCTATGTTGGAGGGTGTAGTTCTTATGAATGAACATTTTGAGCTTCATCTTTGTTGGCCATGGAGTTGGTTTCTCGCTGTTGATGGAGGTAGAAGAAATGGCCGACAGTATACCCGTTTGCCTCATTTTGACCGGAAAACTCCATGGTTATATGGTTTGTGTGGTGGATGGTTGGGAGTGTTGGATGATGAAAGTCCCAGGTCCACTCAATTTAGGAAATGA MTNYGKALRRTPNLRCHRSCHETVIVYTRNRYRALSPRFLLVKSISMDEEVGAKRSKGHGSSATMWAIFKRSLRRESRKMKLLGSAFKWKRLTNLQISFMDNLLFKIVSMLEGVVLMNEHFELHLCWPWSWFLAVDGGRRNGRQYTRLPHFDRKTPWLYGLCGGWLGVLDDESPRSTQFRK Homology
BLAST of Carg19929 vs. NCBI nr
Match: KAG7019527.1 (hypothetical protein SDJN02_18488, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384.4 bits (986), Expect = 5.4e-103 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of Carg19929 vs. NCBI nr
Match: KAG6583910.1 (hypothetical protein SDJN03_19842, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.9 bits (416), Expect = 6.7e-37 Identity = 86/101 (85.15%), Postives = 92/101 (91.09%), Query Frame = 0
BLAST of Carg19929 vs. NCBI nr
Match: KAG7012520.1 (hypothetical protein SDJN02_25272, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 2.2e-24 Identity = 62/72 (86.11%), Postives = 66/72 (91.67%), Query Frame = 0
BLAST of Carg19929 vs. NCBI nr
Match: KJB57280.1 (hypothetical protein B456_009G156500 [Gossypium raimondii]) HSP 1 Score: 65.5 bits (158), Expect = 5.5e-07 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Carg19929 vs. NCBI nr
Match: EOY27743.1 (Uncharacterized protein TCM_029517 [Theobroma cacao]) HSP 1 Score: 64.7 bits (156), Expect = 9.4e-07 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Carg19929 vs. ExPASy TrEMBL
Match: A0A061GEB5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029517 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.5e-07 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Carg19929 vs. ExPASy TrEMBL
Match: A0A6J1B6L1 (uncharacterized protein LOC110424571 OS=Herrania umbratica OX=108875 GN=LOC110424571 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 5.9e-07 Identity = 31/61 (50.82%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of Carg19929 vs. ExPASy TrEMBL
Match: A0A5D2UMB9 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D06G243400v1 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.0e-06 Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0
BLAST of Carg19929 vs. ExPASy TrEMBL
Match: A0A5D2QA32 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G234200v1 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-06 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Carg19929 vs. ExPASy TrEMBL
Match: A0A6P4MIU0 (uncharacterized protein LOC108460063 OS=Gossypium arboreum OX=29729 GN=LOC108460063 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 1.7e-06 Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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