Carg19884 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19884
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	SAP30-binding protein-like isoform X2
Location	Carg_Chr13: 7038661 .. 7041795 (-)
RNA-Seq Expression	Carg19884
Synteny	Carg19884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGACGGCTGTTTTTTCTTCAAATTTCTTCATTTTCGTTTTCACTGGATTTGCTCACCCAGGAAACTGAAAACCTTCTCCCTAGTATCGACATTGATTCAAAATACCAAGATTTCTGCATCCGTTTGAGATCCGTCTTCCGATTTCTGAAGTCCTATTTCTTTGTTGTTGAATTAATTCCTTCCGGGTGTCGAGAATCGAAGCTCTCATGGCATCGAAGAAGAAAGAATCTGAAGGTATAGCTTTACTCTCGATGTACAATGACGAGGATGATGAGATGGAAGACGTTGAAGACCAAGAAGAAGAAGAAGAAGACAGTGAAATGCAGCAGCAGGAGAGGCAAGAAGAGGGAGGAGAAGAAGATTATGGTGGAGTTAGGGTTGCAGAAGAAGAGTCGGTCGCGAACAGTGATGGAATGATTATCAGTGATTCTGCTGATTACTCAATGCTGCCGGTTGCTGATGAAAATTCGACTGCAGCTAAGCTCAAATTCGGGTCATCCACACCGCAACCGACGCAGGTTGTGGTTTCATCGTCGTCAATGCTATTACAAGCTGGTCAATTCGATAATTCTGGTAGGAGAAGGGGGACACTTGTGATAGTTGATTACGGTAATGATGAAGCCGCATTGTCTCCTGAGGCTGAGGTACTTACAACATCTCTACTTGGTTGGTGAGAAACGGAAGCCTCTACTTTTAACTTTGAAATTTTTCATTTACATTCCTCTTATCGTTGACATCGCGAAGGTTGTAATCGTCGTTGGCTAAAATTACAACGGGATATTAAATATATTAATCAAATGAACAAGATGGACGGTTCCACGTGTTGAAGAAGATGTTGAAGAAGATGTTTGTTTAGTTCAGCTTTAGGAGAATTAAGCTGGCATATCTGAGAAAATTCTTCTATGGAAATATGTGTTGTAACTTCCATCTTATTTGTATGGTGACTGGTGGAAAGTTGTATCTAATGTTTCCTTCCTATTGCTTGCATTCAGGATGGAGAAATTGAAGAATCTGGTCGTGTTACATTTGGCGATGAGCTTTTAGGCACTAATGGTTTGTATAGTTCTTTTAGCTATGAAATGTTACTTTGCTTCTTCTCGTTTTTAAAATCTATCAGTGCTGCAAGCTCATAGTTAATACACATCTGCTCTAGAGAACTCTTCACTCCTATGATTCCTTACTCGTTTCGCAATTAATCCATGTTATTTAATTGCTTATCTTATGAAAATATGGATTTATTCCTCTGTTCTTAAACTTTGATTGGTGAGTGGTATCATGAAATTATCGGTTTTCTAGGTCCTTGCCTCGTGTTGGAATGCAAAATGGTTTGTTTTATAACATCTGAATTGTTTATTGGAAGTATTAGTGGCAAGGGGTGGGGTTTAAGGTTGTTGGCTATTGAGGATCTAATAATGTAACTCATGAGGTAGAGAGTAGAAGTGATTTTGTAATCGCCCAAGCCCATTGCTAGCATATATTGTCCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAATGCGTCTACTACGGAAGGTTTCCACACCCTTATAAAGAGTGCTTCGTTCTCCTCCTCAACCGATGTGAGATCTCACAATCCACCCCATATAAAGAGTCCTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGGAGGTTTCCACACCCTTATAAAGAATGCTTCACTCTCCTCCCCAACCGATGTGGGATCTCACAACCCACCCCTTTTCGAGGTCCGGCGTCTTCACTGGCACTCGCTTCCCTCTCCGATCGATGTGGGATCTCACAATTTTTTTTGTTAAATGCTTAAATCCCAACAACATGCATACTGAAAAATTACTATATCTTGGAAAGTCTAGCAAATTGTAGGACTTTTTTGCCCTTTTATACAGTATCATAATTATATATGCAAGGCAAACTTATTTATTGGCACTGGTGTTTTATTGTGTTAAATATTTCATGACTCAAGATTGCTTATGTTGTGATGATTTCTTTTTAGACGCTTGACGAACTTGATGAGTTAACTTTGAAATACTATCTTCAGGTGGCAGTGTCTTGTGATGCTTATGATCACTTCTCCTATTTCATCCTCTTCGGCTATTTTATTTTATTTATTTTTTATGGTACAGGCGATTTTGATAGAACATCTCCAGGAACTGTAACGGTCTCAACACCAAACAATCTAGCCACTCCTCAGATTTCTGAATCACCACATTCTGGTTCAATGAATAATATGATACTGGAATCTGAAACTGAAAATGTTGAGGAAACTGTTGAAGAAGCTAAAAAAGATATTGATCCCTTGGACAATTTTCTTCCTCGGCCAAAGGAAAGATGCGCTGAGGATCTGCAAGTTAGTTTCCTTTCTGATATATTGGCTACTTGTGTTCTGAGGAAATAGTATGTGACTGTTGATCTAGATTTTGAAAAGAAACATAAAGAAGTTAATATGTATGAAATATATTTACTCCTTTTTAGTTTCTCAAGTGAGTAGCTTGGGTTGTTTACTAATGTGACTGGCAGGATATGGGGTTAGGATATGCTTACATGTTGGTGGGCCTAATGTATTCTATGTCGGCGAGTGTGTGACTTGGTTTCTGACCTTGATGGGGATTGGTTTTTTGTTGTATGGCCCTCTTGATAGATATAAATTTTAGAATGTGGATGCACGGGGAATTATGCAAGTGTAAGGTCTTAGTGCGATGAAATTATTTTAGTTCTGCAGGATGTATTGGTTTTTCAATTCCTAGCAACTTGGGTATGACTTACCTTAAGGACCAGTTAAAAGGAGCCCCTGTGGACTGTTAAGTAAGAAGACAGTACCTTTTAGTCATTGATAACCACATCCATCTAGTTTCTTCAATAATTCATGGCTTAATTATTTTTTATTCTCCTGACGTTCTTGTTTCTTTCCTTAACTTTATGTGCAGAGGAAAATCAATAAGTTTCTTGAGTACAAGAAAGCTGGAAAAAGCTTCAATGCAGAAGTACGCATTAGGAAAGACTACCGGAATCCAGATTTCTTGTTACACGCTGTGAGGTATCAAGATATTGACCAGATTGGGTCTTGCTTCAGTAAGGATGTGTTTGACCCTCATGGATATGATAAAAGTGACTACTATACTGAAATAGGTCATTGA

mRNA sequence

AAGACGGCTGTTTTTTCTTCAAATTTCTTCATTTTCGTTTTCACTGGATTTGCTCACCCAGGAAACTGAAAACCTTCTCCCTAGTATCGACATTGATTCAAAATACCAAGATTTCTGCATCCGTTTGAGATCCGTCTTCCGATTTCTGAAGTCCTATTTCTTTGTTGTTGAATTAATTCCTTCCGGGTGTCGAGAATCGAAGCTCTCATGGCATCGAAGAAGAAAGAATCTGAAGGTATAGCTTTACTCTCGATGTACAATGACGAGGATGATGAGATGGAAGACGTTGAAGACCAAGAAGAAGAAGAAGAAGACAGTGAAATGCAGCAGCAGGAGAGGCAAGAAGAGGGAGGAGAAGAAGATTATGGTGGAGTTAGGGTTGCAGAAGAAGAGTCGGTCGCGAACAGTGATGGAATGATTATCAGTGATTCTGCTGATTACTCAATGCTGCCGGTTGCTGATGAAAATTCGACTGCAGCTAAGCTCAAATTCGGGTCATCCACACCGCAACCGACGCAGGTTGTGGTTTCATCGTCGTCAATGCTATTACAAGCTGGTCAATTCGATAATTCTGGTAGGAGAAGGGGGACACTTGTGATAGTTGATTACGGTAATGATGAAGCCGCATTGTCTCCTGAGGCTGAGGATGGAGAAATTGAAGAATCTGGTCGTGTTACATTTGGCGATGAGCTTTTAGGCACTAATGGCGATTTTGATAGAACATCTCCAGGAACTGTAACGGTCTCAACACCAAACAATCTAGCCACTCCTCAGATTTCTGAATCACCACATTCTGGTTCAATGAATAATATGATACTGGAATCTGAAACTGAAAATGTTGAGGAAACTGTTGAAGAAGCTAAAAAAGATATTGATCCCTTGGACAATTTTCTTCCTCGGCCAAAGGAAAGATGCGCTGAGGATCTGCAAAGGAAAATCAATAAGTTTCTTGAGTACAAGAAAGCTGGAAAAAGCTTCAATGCAGAAGTACGCATTAGGAAAGACTACCGGAATCCAGATTTCTTGTTACACGCTGTGAGGTATCAAGATATTGACCAGATTGGGTCTTGCTTCAGTAAGGATGTGTTTGACCCTCATGGATATGATAAAAGTGACTACTATACTGAAATAGGTCATTGA

Coding sequence (CDS)

ATGGCATCGAAGAAGAAAGAATCTGAAGGTATAGCTTTACTCTCGATGTACAATGACGAGGATGATGAGATGGAAGACGTTGAAGACCAAGAAGAAGAAGAAGAAGACAGTGAAATGCAGCAGCAGGAGAGGCAAGAAGAGGGAGGAGAAGAAGATTATGGTGGAGTTAGGGTTGCAGAAGAAGAGTCGGTCGCGAACAGTGATGGAATGATTATCAGTGATTCTGCTGATTACTCAATGCTGCCGGTTGCTGATGAAAATTCGACTGCAGCTAAGCTCAAATTCGGGTCATCCACACCGCAACCGACGCAGGTTGTGGTTTCATCGTCGTCAATGCTATTACAAGCTGGTCAATTCGATAATTCTGGTAGGAGAAGGGGGACACTTGTGATAGTTGATTACGGTAATGATGAAGCCGCATTGTCTCCTGAGGCTGAGGATGGAGAAATTGAAGAATCTGGTCGTGTTACATTTGGCGATGAGCTTTTAGGCACTAATGGCGATTTTGATAGAACATCTCCAGGAACTGTAACGGTCTCAACACCAAACAATCTAGCCACTCCTCAGATTTCTGAATCACCACATTCTGGTTCAATGAATAATATGATACTGGAATCTGAAACTGAAAATGTTGAGGAAACTGTTGAAGAAGCTAAAAAAGATATTGATCCCTTGGACAATTTTCTTCCTCGGCCAAAGGAAAGATGCGCTGAGGATCTGCAAAGGAAAATCAATAAGTTTCTTGAGTACAAGAAAGCTGGAAAAAGCTTCAATGCAGAAGTACGCATTAGGAAAGACTACCGGAATCCAGATTTCTTGTTACACGCTGTGAGGTATCAAGATATTGACCAGATTGGGTCTTGCTTCAGTAAGGATGTGTTTGACCCTCATGGATATGATAAAAGTGACTACTATACTGAAATAGGTCATTGA

Protein sequence

MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAEEESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFDNSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVSTPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDLQRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDKSDYYTEIGH

Homology

[Close]

BLAST of Carg19884 vs. NCBI nr
Match: KAG7019571.1 (SAP30-binding protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 587.4 bits (1513), Expect = 7.1e-164
Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD
Sbjct: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEIGH 311
           KSDYYTEIGH
Sbjct: 301 KSDYYTEIGH 310

[Close]

BLAST of Carg19884 vs. NCBI nr
Match: KAG6583951.1 (SAP30-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 307/308 (99.68%), Postives = 307/308 (99.68%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQERQEEGGEEDYGGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQERQEEGGEEDYGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD
Sbjct: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. NCBI nr
Match: XP_023519550.1 (SAP30-binding protein-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.4e-156
Identity = 299/308 (97.08%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQ+RQEEGGEEDYGGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQQRQEEGGEEDYGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSD MIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDRMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILESET+NVEETVEEAKKDIDPLDNFLP PKE+CAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILESETDNVEETVEEAKKDIDPLDNFLPPPKEKCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. NCBI nr
Match: XP_023519549.1 (uncharacterized protein LOC111782930 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 1.4e-156
Identity = 299/308 (97.08%), Postives = 304/308 (98.70%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQ+RQEEGGEEDYGGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQQRQEEGGEEDYGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSD MIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDRMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILESET+NVEETVEEAKKDIDPLDNFLP PKE+CAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILESETDNVEETVEEAKKDIDPLDNFLPPPKEKCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. NCBI nr
Match: XP_022927297.1 (uncharacterized protein LOC111434175 isoform X1 [Cucurbita moschata])

HSP 1 Score: 556.2 bits (1432), Expect = 1.8e-154
Identity = 297/308 (96.43%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQERQEEG EEDYG VRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQERQEEGVEEDYGRVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSDG+IISDSADYSMLPV+DENSTAAKLKFGSS PQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDGVIISDSADYSMLPVSDENSTAAKLKFGSSIPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILESETENVEETVEEAKKD DPLDNFLP PKERCAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILESETENVEETVEEAKKDTDPLDNFLPPPKERCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. ExPASy Swiss-Prot
Match: Q9UHR5 (SAP30-binding protein OS=Homo sapiens OX=9606 GN=SAP30BP PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.0e-09
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 205 ESETENVEETV---EEAKKDIDPLD-NFLPRPKERCAEDLQRKINKFLEYK-KAGKSFNA 264
           E+E  + +E V    E  +++ P +    P P  RC+  LQ KI K  E K K G   N 
Sbjct: 92  EAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNY 151

Query: 265 EVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDKSDYY 306
            ++ +K++RNP      +++  ID++G+ + KD+FDPHG+ +  YY
Sbjct: 152 IIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYY 197

[Close]

BLAST of Carg19884 vs. ExPASy Swiss-Prot
Match: Q02614 (SAP30-binding protein OS=Mus musculus OX=10090 GN=Sap30bp PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.0e-09
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 0


Query: 205 ESETENVEETV---EEAKKDIDPLD-NFLPRPKERCAEDLQRKINKFLEYK-KAGKSFNA 264
           E+E  + +E V    E  +++ P +    P P  RC+  LQ KI K  E K K G   N 
Sbjct: 92  EAEKRDPQELVASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNY 151

Query: 265 EVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDKSDYY 306
            ++ +K++RNP      +++  ID++G+ + KD+FDPHG+ +  YY
Sbjct: 152 IIQRKKEFRNPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYY 197

[Close]

BLAST of Carg19884 vs. ExPASy TrEMBL
Match: A0A6J1EGS0 (uncharacterized protein LOC111434175 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434175 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.5e-155
Identity = 297/308 (96.43%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQERQEEG EEDYG VRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQERQEEGVEEDYGRVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSDG+IISDSADYSMLPV+DENSTAAKLKFGSS PQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDGVIISDSADYSMLPVSDENSTAAKLKFGSSIPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILESETENVEETVEEAKKD DPLDNFLP PKERCAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILESETENVEETVEEAKKDTDPLDNFLPPPKERCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. ExPASy TrEMBL
Match: A0A6J1EKL6 (SAP30-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434175 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.5e-155
Identity = 297/308 (96.43%), Postives = 301/308 (97.73%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEEDSEMQQQERQEEG EEDYG VRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDSEMQQQERQEEGVEEDYGRVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSDG+IISDSADYSMLPV+DENSTAAKLKFGSS PQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDGVIISDSADYSMLPVSDENSTAAKLKFGSSIPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILESETENVEETVEEAKKD DPLDNFLP PKERCAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILESETENVEETVEEAKKDTDPLDNFLPPPKERCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. ExPASy TrEMBL
Match: A0A6J1KJL8 (SAP30-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495209 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 292/308 (94.81%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEED+EMQQQ+RQEEGGEED+GGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDTEMQQQQRQEEGGEEDFGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSD MI+SDSADYSMLPVADENSTAAK KFGSS PQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDIMIVSDSADYSMLPVADENSTAAKPKFGSSIPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILE ETENVEETVEEAKKDIDPLD+FLP PKE+CAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILEFETENVEETVEEAKKDIDPLDSFLPPPKEKCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAV YQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVSYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. ExPASy TrEMBL
Match: A0A6J1KLA4 (uncharacterized protein LOC111495209 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495209 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 292/308 (94.81%), Postives = 300/308 (97.40%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKKESEGIALLSMYNDEDDEMEDVEDQ EEEED+EMQQQ+RQEEGGEED+GGVRVAE
Sbjct: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQ-EEEEDTEMQQQQRQEEGGEEDFGGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EESVANSD MI+SDSADYSMLPVADENSTAAK KFGSS PQPTQVVVSSS MLLQAGQFD
Sbjct: 61  EESVANSDIMIVSDSADYSMLPVADENSTAAKPKFGSSIPQPTQVVVSSSPMLLQAGQFD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTLVIVDYGNDEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS
Sbjct: 121 NSGRRRGTLVIVDYGNDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFLPRPKERCAEDL 240
           TPNNLATPQISESPHSGSMNN+ILE ETENVEETVEEAKKDIDPLD+FLP PKE+CAEDL
Sbjct: 181 TPNNLATPQISESPHSGSMNNVILEFETENVEETVEEAKKDIDPLDSFLPPPKEKCAEDL 240

Query: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYD 300
           QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAV YQDIDQIGSCFSKDVFDPHGYD
Sbjct: 241 QRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVSYQDIDQIGSCFSKDVFDPHGYD 300

Query: 301 KSDYYTEI 309
           KSDYYTEI
Sbjct: 301 KSDYYTEI 307

[Close]

BLAST of Carg19884 vs. ExPASy TrEMBL
Match: A0A5A7UPK6 (SAP30-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002360 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.7e-134
Identity = 264/309 (85.44%), Postives = 278/309 (89.97%), Query Frame = 0


Query: 1   MASKKKESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAE 60
           MASKKK+SEGIALLSMYNDEDDEMEDVED EEEEED E+  Q+ QE GGEEDY GVRVAE
Sbjct: 1   MASKKKQSEGIALLSMYNDEDDEMEDVEDLEEEEEDGELHPQQMQEGGGEEDYAGVRVAE 60

Query: 61  EESVANSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFD 120
           EE VANSD MIISDSA+ S  PVA EN T  KLK+GSSTPQP  VVVSSS M+LQ GQ D
Sbjct: 61  EELVANSDRMIISDSANDSTPPVAGENLTPDKLKYGSSTPQPPHVVVSSSPMVLQTGQLD 120

Query: 121 NSGRRRGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVS 180
           NSGRRRGTL IVDYG+DEAA+SPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVT+S
Sbjct: 121 NSGRRRGTLAIVDYGHDEAAMSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTIS 180

Query: 181 TPNNLATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDPLDNFL-PRPKERCAED 240
           T NNL+TPQISESPHSGSMNN + ESETE VEETVEE KKDIDPLD FL P PKE+C+ED
Sbjct: 181 TSNNLSTPQISESPHSGSMNNGMPESETEKVEETVEEEKKDIDPLDKFLPPPPKEKCSED 240

Query: 241 LQRKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGY 300
           LQRKINKFLEYKKAGKSFNAEVR RKDYRNPDFLLHAVRYQDIDQIGSCFSK+VFDPHGY
Sbjct: 241 LQRKINKFLEYKKAGKSFNAEVRNRKDYRNPDFLLHAVRYQDIDQIGSCFSKEVFDPHGY 300

Query: 301 DKSDYYTEI 309
           DKSDYYTEI
Sbjct: 301 DKSDYYTEI 309

[Close]

BLAST of Carg19884 vs. TAIR 10
Match: AT1G29220.1 (transcriptional regulator family protein )

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-30
Identity = 116/301 (38.54%), Postives = 144/301 (47.84%), Query Frame = 0


Query: 6   KESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAEEESVA 65
           K+SEGIALLS+Y+DEDD  E++ED EEEEE+ E Q+ + + E         ++ EE+ V 
Sbjct: 4   KKSEGIALLSVYSDEDD--EEMEDAEEEEEEDEKQRNQEESE---------KIIEEDQVE 63

Query: 66  NSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFDNSGRR 125
            ++ M                                                       
Sbjct: 64  EANYM------------------------------------------------------- 123

Query: 126 RGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVSTPNNL 185
                      DE            EE GR   G E   T    D     +    TP +L
Sbjct: 124 -----------DE------------EEKGR---GGEDSRTPRLLDGVGASSSAHGTPRSL 183

Query: 186 ATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDP-LDNFL-PRPKERCAEDLQRK 245
              + S    S   N MI ES   + E   + + +  D  LD FL PRP+ERC+E+LQRK
Sbjct: 184 DNDESSRPDWS---NRMIGESGVADGERGDDASGESSDTLLDQFLPPRPRERCSEELQRK 209

Query: 246 INKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSKDVFDPHGYDKSD 305
           I+KFL  KK GKSFN+EVR RK+YRNPDFLLHAV YQDIDQIGSCFSKDVFDP GYD SD
Sbjct: 244 IDKFLSLKKMGKSFNSEVRNRKEYRNPDFLLHAVSYQDIDQIGSCFSKDVFDPSGYDPSD 209

[Close]

BLAST of Carg19884 vs. TAIR 10
Match: AT1G29220.2 (transcriptional regulator family protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27
Identity = 116/313 (37.06%), Postives = 144/313 (46.01%), Query Frame = 0


Query: 6   KESEGIALLSMYNDEDDEMEDVEDQEEEEEDSEMQQQERQEEGGEEDYGGVRVAEEESVA 65
           K+SEGIALLS+Y+DEDD  E++ED EEEEE+ E Q+ + + E         ++ EE+ V 
Sbjct: 4   KKSEGIALLSVYSDEDD--EEMEDAEEEEEEDEKQRNQEESE---------KIIEEDQVE 63

Query: 66  NSDGMIISDSADYSMLPVADENSTAAKLKFGSSTPQPTQVVVSSSSMLLQAGQFDNSGRR 125
            ++ M                                                       
Sbjct: 64  EANYM------------------------------------------------------- 123

Query: 126 RGTLVIVDYGNDEAALSPEAEDGEIEESGRVTFGDELLGTNGDFDRTSPGTVTVSTPNNL 185
                      DE            EE GR   G E   T    D     +    TP +L
Sbjct: 124 -----------DE------------EEKGR---GGEDSRTPRLLDGVGASSSAHGTPRSL 183

Query: 186 ATPQISESPHSGSMNNMILESETENVEETVEEAKKDIDP-LDNFL-PRPKERCAEDLQ-- 245
              + S    S   N MI ES   + E   + + +  D  LD FL PRP+ERC+E+LQ  
Sbjct: 184 DNDESSRPDWS---NRMIGESGVADGERGDDASGESSDTLLDQFLPPRPRERCSEELQAR 221

Query: 246 ----------RKINKFLEYKKAGKSFNAEVRIRKDYRNPDFLLHAVRYQDIDQIGSCFSK 305
                     RKI+KFL  KK GKSFN+EVR RK+YRNPDFLLHAV YQDIDQIGSCFSK
Sbjct: 244 THWCVVWGLLRKIDKFLSLKKMGKSFNSEVRNRKEYRNPDFLLHAVSYQDIDQIGSCFSK 221

The following BLAST results are available for this feature:

BLAST of Carg19884 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019571.1	7.1e-164	100.00	SAP30-binding protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6583951.1	1.3e-160	99.68	SAP30-binding protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023519550.1	1.4e-156	97.08	SAP30-binding protein-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023519549.1	1.4e-156	97.08	uncharacterized protein LOC111782930 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022927297.1	1.8e-154	96.43	uncharacterized protein LOC111434175 isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg19884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UHR5	8.0e-09	33.96	SAP30-binding protein OS=Homo sapiens OX=9606 GN=SAP30BP PE=1 SV=1	[more]
Q02614	8.0e-09	33.96	SAP30-binding protein OS=Mus musculus OX=10090 GN=Sap30bp PE=1 SV=2	[more]

BLAST of Carg19884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGS0	8.5e-155	96.43	uncharacterized protein LOC111434175 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EKL6	8.5e-155	96.43	SAP30-binding protein-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434...	[more]
A0A6J1KJL8	1.4e-152	94.81	SAP30-binding protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149520...	[more]
A0A6J1KLA4	1.4e-152	94.81	uncharacterized protein LOC111495209 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7UPK6	1.7e-134	85.44	SAP30-binding protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Carg19884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29220.1	2.2e-30	38.54	transcriptional regulator family protein	[more]
AT1G29220.2	1.0e-27	37.06	transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 201..221
None	No IPR available	COILS	Coil	Coil	coord: 17..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69
IPR012479	SAP30-binding protein	PFAM	PF07818	HCNGP	coord: 230..308 e-value: 2.9E-21 score: 75.9
IPR012479	SAP30-binding protein	PANTHER	PTHR13464	TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP	coord: 1..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19884-RA	Carg19884-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0016874	ligase activity