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Carg19730 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATCGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGACGGTAACGGAGGCAAGGCTGCTCCGGCCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGGGCTTAGAGAGCGATGGAATACTCGATCCAGTTGTTGGGTTTGGCAATATGGGCGATGCAGGAAGAGGGGGTAGCGCACATGGGTTAGGAAGCAATGGCATTGGTGGTAGAGTTGGGAGCGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCAGTGTAGGTGACCAAACCAGTTACGACGACTCTCTGACTCGAAATTCACGAACCTTTTGGACACAAAAATTCAAAATTAGAAGTTTAGAGATCGGTTTGGTATTTTTAAAGTTTAAAGATTTAAAAGTAAAATTAACGAGACTTGGAATTTAACGTTAGCAACTTAAAATAATGTGAGATTTCACATCAGTTGGAGAGGATAACGAATTATTTCTTATAAGAGTGTGAAAATCTCTCTTTAGTAGACGCCTTTTTAAATCGTGAGGCTGTCGGTGATACATAATGGACTAAAGTGGACACTATCTGTTGATAGACTTGAGTTGTTACAAATGATATCAGAGCCAGACACGAGGCGGCATGCCATCAAGACACTAGGTCTCGTTGGAGTGTGAATTGTGAGATCCCACATTGATTGGAGAGAGGAATAAAACACTTCTTACGAGAGTGTGAAAACCTCTCCCTAGCAGACACGTTGGCTGATGACGATACATAATGCGTCAAAGCGGACAATATTTGTTAGCGGTAGGTTTGCGCTGCTATGGACTACTCTTGCTCACTCATTTTCATTCTTGGCTATGATGGATTGATAAGCGATCTAATAGATTATTATTATTATTATTTATTTATTTATTTTAATTTTGACGTTGAATTTTATAGTATCGAGGTCACGTCTCGTGTTTGAAAATTTGTAAACGTCATTTTCTCTCTAATTAATTTTTATTTCTACTTATTGACTTTCTACAAATTTATAATAAGTCGAGTGAGAAATATTTAAATAATTAAACTTATGATGGATTGATAAACGATATAATAGAAATATTTTTTTTTTTCTTTTTTTTAGTTCAAAAGCGTTATTTAATAATGTATTTAACAAAAAAAATAAATAAATAAATAAAAGAAAATTCCATATCATATCATTAAAAAATAGAACACAGTACAAGACAAACTTTTAAACAAACTCCAAATATAACCAATAACATGAAAGGATAGAATGGTATGTCAAAACCATAAGTATAATTAAGAACAATCACACAAAGGAACTAGCTAGGACTCCATCAAGGTGAAGAGGTAGCGGCCGGGGGCGGTGTGAGGAAAGGGATCGACGGGAAAGTCATTGGGAAGGACGGTAGAGTCGGGAGTGGAGGCAATGTCACTCCGGTCGGGATGCTACCGGGGAAGCTAGGAAGAGGAGGCATCTTAGGGAGAGAAGGTTGAGTAGTTGGCAACGTAGGCTGTGGGAGATTAGGAATAGAGGGCATTCCCGGTACCGTCGGGAAGGGCGGTAGAGGCGGCAACGAGGGCAACCCTGGCACGCTCGGCTGA ATGAAAACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATCGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGACGGTAACGGAGGCAAGGCTGCTCCGGCCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGGGCTTAGAGAGCGATGGAATACTCGATCCAGTTGTTGGGTTTGGCAATATGGGCGATGCAGGAAGAGGGGGTAGCGCACATGGGTTAGGAAGCAATGGCATTGGTGGTAGAGTTGGGAGCGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCACTAGGACTCCATCAAGGTGAAGAGGTAGCGGCCGGGGGCGGTGTGAGGAAAGGGATCGACGGGAAAGTCATTGGGAAGGACGGTAGAGTCGGGAGTGGAGGCAATGTCACTCCGGTCGGGATGCTACCGGGGAAGCTAGGAAGAGGAGGCATCTTAGGGAGAGAAGGCTGTGGGAGATTAGGAATAGAGGGCATTCCCGGTACCGTCGGGAAGGGCGGTAGAGGCGGCAACGAGGGCAACCCTGGCACGCTCGGCTGA ATGAAAACAATAGGAAAGAACAACAACTATTCTATACCAGCTCAAGGGGAAGAAGTTGCAGGTGGAGGAAAGAACGGGAGCGACGGAAGTGTAGTCGGGATCGATGGAAGGGATGGCAAGGTTGGAAGCGAAGATGACGGTAACGGAGGCAAGGCTGCTCCGGCCGGGATGTTCATCGGGGAGCTTGGAAGTGGAGGAAGTGTGGGCTTAGAGAGCGATGGAATACTCGATCCAGTTGTTGGGTTTGGCAATATGGGCGATGCAGGAAGAGGGGGTAGCGCACATGGGTTAGGAAGCAATGGCATTGGTGGTAGAGTTGGGAGCGAAGGCGGAGCAGTCTGCAGAAGATGTCGAGTGGCTCGACCACTAGGACTCCATCAAGGTGAAGAGGTAGCGGCCGGGGGCGGTGTGAGGAAAGGGATCGACGGGAAAGTCATTGGGAAGGACGGTAGAGTCGGGAGTGGAGGCAATGTCACTCCGGTCGGGATGCTACCGGGGAAGCTAGGAAGAGGAGGCATCTTAGGGAGAGAAGGCTGTGGGAGATTAGGAATAGAGGGCATTCCCGGTACCGTCGGGAAGGGCGGTAGAGGCGGCAACGAGGGCAACCCTGGCACGCTCGGCTGA MKTIGKNNNYSIPAQGEEVAGGGKNGSDGSVVGIDGRDGKVGSEDDGNGGKAAPAGMFIGELGSGGSVGLESDGILDPVVGFGNMGDAGRGGSAHGLGSNGIGGRVGSEGGAVCRRCRVARPLGLHQGEEVAAGGGVRKGIDGKVIGKDGRVGSGGNVTPVGMLPGKLGRGGILGREGCGRLGIEGIPGTVGKGGRGGNEGNPGTLG Homology
BLAST of Carg19730 vs. NCBI nr
Match: KAG7014900.1 (hypothetical protein SDJN02_22531, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 392.9 bits (1008), Expect = 1.7e-105 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0
BLAST of Carg19730 vs. NCBI nr
Match: XP_022922561.1 (oleosin-B3 [Cucurbita moschata]) HSP 1 Score: 223.8 bits (569), Expect = 1.4e-54 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Carg19730 vs. NCBI nr
Match: KAG6576877.1 (hypothetical protein SDJN03_24451, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220.3 bits (560), Expect = 1.5e-53 Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of Carg19730 vs. NCBI nr
Match: XP_022984242.1 (uncharacterized protein LOC111482613 [Cucurbita maxima]) HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50 Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of Carg19730 vs. NCBI nr
Match: XP_023552841.1 (uncharacterized protein LOC111810367 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.1 bits (531), Expect = 3.5e-50 Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy Swiss-Prot
Match: P9WIF8 (Uncharacterized PE-PGRS family protein PE_PGRS20 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=PE_PGRS20 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.3e-04 Identity = 71/197 (36.04%), Postives = 87/197 (44.16%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy Swiss-Prot
Match: P9WIF9 (Uncharacterized PE-PGRS family protein PE_PGRS20 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=PE_PGRS20 PE=3 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.3e-04 Identity = 71/197 (36.04%), Postives = 87/197 (44.16%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy Swiss-Prot
Match: Q79FB3 (PE-PGRS family protein PE_PGRS47 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=PE_PGRS47 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 6.8e-04 Identity = 72/200 (36.00%), Postives = 81/200 (40.50%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy TrEMBL
Match: A0A6J1E4G5 (oleosin-B3 OS=Cucurbita moschata OX=3662 GN=LOC111430530 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 6.7e-55 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy TrEMBL
Match: A0A6J1J1P5 (uncharacterized protein LOC111482613 OS=Cucurbita maxima OX=3661 GN=LOC111482613 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 5.9e-51 Identity = 112/122 (91.80%), Postives = 116/122 (95.08%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy TrEMBL
Match: A0A5D3E0R8 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00040 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.5e-18 Identity = 73/117 (62.39%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy TrEMBL
Match: A0A5A7TL95 (Carbonic anhydrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00040 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.5e-18 Identity = 73/117 (62.39%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Carg19730 vs. ExPASy TrEMBL
Match: A0A1S4DZT7 (uncharacterized PE-PGRS family protein PE_PGRS33 OS=Cucumis melo OX=3656 GN=LOC107991270 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.5e-18 Identity = 73/117 (62.39%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Carg19730 vs. TAIR 10
Match: AT4G01985.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04 Identity = 76/217 (35.02%), Postives = 86/217 (39.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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