Carg19727 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19727
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell;
Location	Carg_Chr16: 1566272 .. 1570538 (-)
RNA-Seq Expression	Carg19727
Synteny	Carg19727

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTTAGGAAAAGTTTGTCGATTCAATCATCTTGCCCAATCAGTAAGCTGAACCGTAAGAGGGAAATTCAGGGGAACTCAGAAAATGGAGAGAGGCGGTGAGGGAGCGGCGGCGGGGACGACGGCAGCGGCGACGGCGGCATCGTCTTCTCAGACCAGCAGACCTGGTAGGAGGGTGGATCCTTTGCTTGTAACTTGCAGGTTTTTCAGTGTTGTAACAGCTCTCACTGCCATTCTCTGCATTGTTTCCAACGTTATCGCTGCGATTCGGTCATTTAAGAACAAATCCGATGTACTCACTCTGTTGCTTCTTCGTTAAGTAATTTTTTCAATTGAAAGCGGGATCATGTGTTCGTGTAACTTTTTGGCAGATATTCGATGGTATATTTCGGTGTTATGCCGTTGTGATTGCGTTCTTCGTGGTTCTTGCTGAGACGGAATGGGAGTTTATTCTCAAGAACTGGAAGGTTTTGCTTTCGAACCCTAAATTCTTAATTTCTGAAGTGATTTTACTCCTGACTCTATTTGTTTTCCACTTCAATCTTCCCATTAAATCTTAAAAATGATCAGAAATGAAGGGATATATGGTTTCTTTATGACTTTCTAGGCAATAATTGATCAGTGAAGCTTGAAATCTGCCCCCTCCCTCCATACAGTTCTCTGGCTCCATGTCAAAACTGGTGTTTGTTTGCTGCTATGGTGGTATTTTAATGGTGTCTCAAGTTTTTATTAGTCTGGTGGTCCATTTAGTGTCTAGGAGAGGACTTTTTGTATTGAAGAAAAGGGAAACTTATGATGGCCTTTTCATTTTCTACATTCATTTGTTCCTATCAACACAAATAAGCATTTCTTTTACACAAATTTATCCTGAAGGTGTGTGTGCAGCAGTTGGTCGGGGTTGGTTTTCGACTGAAACTGACCACGTTGGTTTCCATATATTGGAAAACGACGGGTTTTTCATGTTTGATTGGATCAACCAACCGACCAGTTGATGTGTGTGTGTGTGTGTGTGTTATTTGGGACTGTTTGGGCAGACGGGATGCTGTCAGATATAGGAGATGGATAGCGAAGTACAAAGCAATGAGGGAGACGAGTAAAATGATTGAGGAGGCAAGAATGGGACGACGAATGAGGGAGGCGAGAGATATGGCAGAGAGAGAGTGAGACGAGTGGCGAGGGAGGCAGAGGGAGAGAATCAAGGGGGATGCGGTGTGTCACAATTACACTTTCTTGAAACTTCGCAAAGCATACCGAGACACAGTGCACAGAGAAGCAGCTTGACTGATGGGGAGAGGAGAGAATATCAGTTGGTTGGTCAGTTTGAGCATTATTGGGCTCGCCTACTAACCGACCTTGCAAAACTGACCCAGACTCACTCATACACTTAAGCTAACTGATCGAAGTTGGTTCGAACGGTTTCGATGGTCGGCTTAATTTTTCAGTCTATGTTGCTCACCCCTAAGGCAAAATTTCTTTATTTTATTTGATACATATATTCATGGTAAATGTTTCACTCCCTTCCATTCTCTGGGATGTCATACTGCTAGCAAGTATCAAACATTACTTTTTGGCATAGAAACTCCTACTGATGGAATTATCAAGTGGAATTGTATATTCGTTCATAGCAGTTCATTCCCTTCCTAAATTTTTTTGGGATGTCACTGGAACTGCAGTCTGCCATGAAGTACTAAAGTTCGCTATATTCTTTGAAGCTCAAAGATGCATATGATGTCTAATTAGGACTTGCCTGCTGCATCATTTAATTCACTTGGGTTTGTGCATTTCAGGTATTGGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTGTAAGGTTTTATTTTGATTAGCATTTGAAACTTTTTCCTTTTTATTTTCCTGACTTGTTCCTATGCGCATATGTTTCTATTTGAGAATCTTGCATGCACTCGGTCAATTTTGTTACTGAATTGTAAGCATACGATTAAAAATATACCTATACATGCAACATCAGTTGTTGGTTAGTTGCCATTTTGTTAGTTCAATGGACGGATGACCATTTCTTAGGATGTTAGACTGAGACTTCTGAAATTTACTCCAATAGGAGACTTTGTCGGTGGTATAAATATAGAACTGCCCAAGCCCACCGCTAACAGATATTGTCATCTTTGAGCGGTTAGAAATGGTATCAAAGCCAAACACCAGACGATGTGCCAGCGAGGAGGCTAAGCCTTGAAGGGGGTGGACACGAGGCGGTGTGCCAGCAAGGGTGCTAGGCCCCGAAGATGGGTGGATTGGGGGGGTCCCACGTCGATTAGAGAAGGAAACGAGTGCCAGCGAGGATGCTGGGTCCCGAAGGGGGATGGACTGTGAGATCCCACATCGGTTGGAGAGGGGAACACAGCATTCTTTATAAGAGTGGAGAAATCTCTCCCTAGCAGATGCGTTTTAAAACTTTGAGGGGGAGCCGAAAAGAGAAAACCCAAAGAGGACAATATGCGCTAGCGGTGGGCTTGGACTGTCACCTTGATCAATTAAATTCCACATGAGATCCATTAAATGCATGGATTTGTTGTATCATTGTTTAAGTTGTAATTGTTTTATTTATTTATTTATTATTATTATTTTTTTGCAGTGTTGCAGTGATGACAAGAGCTTTCCCGGCGTATTCTGTAGAGCAGAGAGAGTTTATTCTTCTTCAAGAGGCTGCAAGTTATCTCCTCCTTGCCTGCGGTGCAGTCTATGTTGTATCGGTGAGCCTTGTGAACAACACCTTGTTTCCTAATTTAATCCTAAGGCTTGGAAAAGATGTTTTATATGTTTCTGCTCTTTGCTTGTTGCGTGATCTGTGTAGTTCTGGTAACTCCGAAGGAAAAGCAATATTTTTAATGGTTAAATGGAGATTTACATATTTTCCTTTCTTTGGTATGTTCCATATTTTGTCTGGTTGAGCTAACAGCAACATAACACAACTTTTACACTCGTGTTTCACTTAGTTTCAACAAAAAAAACTTATGTTACCGTTCATGCACTTGCCCACTAGCAAGTTAGCAAAATAAAAAGTGCATAGCCAAAAAAGGAAACTTTATTCGTATTTGTGCGATAATGTTTTTATAGATAATACTTGGTTGGAGAAGAACATTAGTTACATCAAGAAACAGAGAGTGCGCATTATGCAACAAAGTCAAAAGAAATCAGACACTTGAAAGTTGACATTGCTTGCATCAGTGTATTCTGTATTTCTTTAGAGGTTCATCTTTTTTATTTCGTTTTTTGGTTCTCTTCTCATTGTCTTGTCCCAAAATCTCAATATCCAAGATACTCTCCATAATTGTGCCTTTCTTCATTCTTAGTATGTCTTTGACTTCAGTATAGCTAGGACCCACGAATCTTTACAATGGTACGATATTATCCACTTTGAGCATAGATCTCGTGGCTTTGCTTTTGGTTTCCCCAAAAGGCCCCATACCTATACCTAAGCAAGTATGCATACAATATGTGATTACATGCTTGTTTGCATGGATGACACTAAGTGGAATAATGCATCTCTTTGAAATATTCTGTCATGAATCAACTGATTCTAGTTTTTCCTACGAATCTCAAGGGAATTCTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTTCAAAGGACAGGGTCGTCAAAGATCTTCAGGTAACCGTTATTTTATCGGATAGTTCCATAGCTCAGTGGGGAGTATGGAGGGATACTAACATTGTCTTGCCATTTTTGTAATGAAATACATTAAGACATATTAGTAAACCATTTGTTTACATCATTTTCTCTTAAGGAAGCCATGAATTTGTTGCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGACTCTGTGTGAGACAATTTAAAGACATCCCCATGCATCAGAATATAACTGCACCCACCTGATTCTCGTTTCGCCTCCGGACTGTATGAGCATTTGTGTTGCTTCATTTTTAATTCTACTATGATTGCCCCCTCATAGAGATCTAATCATGTAAATTGTGTCTAACTTGACAATTTGTCTCTGCAGTTATCATGTATTCTGACTGTCTTGACAATTGTCTCGCTGTATTATGAAAAGAATCTGTTTATTGAGACCAAAAAAATGGTGTTTTTCTCTCTAAATTGATGCTGTGACTTCAGTGATTTAGAACCACAGTCCCTGTGACATCTTGATGAACGGTCTCAATCCAACAAGATCACATATGTGAGATCTCACATTGGTTGGAGAGGGTAACGAAACATT

mRNA sequence

ATTCTTAGGAAAAGTTTGTCGATTCAATCATCTTGCCCAATCAGTAAGCTGAACCGTAAGAGGGAAATTCAGGGGAACTCAGAAAATGGAGAGAGGCGGTGAGGGAGCGGCGGCGGGGACGACGGCAGCGGCGACGGCGGCATCGTCTTCTCAGACCAGCAGACCTGGTAGGAGGGTGGATCCTTTGCTTGTAACTTGCAGGTTTTTCAGTGTTGTAACAGCTCTCACTGCCATTCTCTGCATTGTTTCCAACGTTATCGCTGCGATTCGGTCATTTAAGAACAAATCCGATATATTCGATGGTATATTTCGGTGTTATGCCGTTGTGATTGCGTTCTTCGTGGTTCTTGCTGAGACGGAATGGGAGTTTATTCTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTTGTTGCAGTGATGACAAGAGCTTTCCCGGCGTATTCTGTAGAGCAGAGAGAGTTTATTCTTCTTCAAGAGGCTGCAAGTTATCTCCTCCTTGCCTGCGGTGCAGTCTATGTTGTATCGGGAATTCTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTTCAAAGGACAGGGTCGTCAAAGATCTTCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGACTCTGTGTGAGACAATTTAAAGACATCCCCATGCATCAGAATATAACTGCACCCACCTGATTCTCGTTTCGCCTCCGGACTGTATGAGCATTTGTGTTGCTTCATTTTTAATTCTACTATGATTGCCCCCTCATAGAGATCTAATCATGTAAATTGTGTCTAACTTGACAATTTGTCTCTGCAGTTATCATGTATTCTGACTGTCTTGACAATTGTCTCGCTGTATTATGAAAAGAATCTGTTTATTGAGACCAAAAAAATGGTGTTTTTCTCTCTAAATTGATGCTGTGACTTCAGTGATTTAGAACCACAGTCCCTGTGACATCTTGATGAACGGTCTCAATCCAACAAGATCACATATGTGAGATCTCACATTGGTTGGAGAGGGTAACGAAACATT

Coding sequence (CDS)

ATGGAGAGAGGCGGTGAGGGAGCGGCGGCGGGGACGACGGCAGCGGCGACGGCGGCATCGTCTTCTCAGACCAGCAGACCTGGTAGGAGGGTGGATCCTTTGCTTGTAACTTGCAGGTTTTTCAGTGTTGTAACAGCTCTCACTGCCATTCTCTGCATTGTTTCCAACGTTATCGCTGCGATTCGGTCATTTAAGAACAAATCCGATATATTCGATGGTATATTTCGGTGTTATGCCGTTGTGATTGCGTTCTTCGTGGTTCTTGCTGAGACGGAATGGGAGTTTATTCTCAAGAACTGGAAGGTATTGGAATATTGGGCTGGCCGGGGCATGTTGCAAATCTTTGTTGCAGTGATGACAAGAGCTTTCCCGGCGTATTCTGTAGAGCAGAGAGAGTTTATTCTTCTTCAAGAGGCTGCAAGTTATCTCCTCCTTGCCTGCGGTGCAGTCTATGTTGTATCGGGAATTCTGTGCATTGGGTTTCTCAAACGTGCTCGTGAAGAGAAGGAGACTTCAAAGGACAGGGTCGTCAAAGATCTTCAGGAGTTAGAAAGACAAAAGCAAGAACTTGAACAGTTGCTCATTTCAGACTCTGTGTGA

Protein sequence

MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLISDSV

Homology

[Close]

BLAST of Carg19727 vs. NCBI nr
Match: XP_022922529.1 (uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothetical protein SDJN03_24454, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014903.1 hypothetical protein SDJN02_22534 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLISDSV
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Carg19727 vs. NCBI nr
Match: XP_023552582.1 (uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.1 bits (941), Expect = 9.7e-98
Identity = 197/199 (98.99%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MERGGEGAA GTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNV+AA
Sbjct: 1   MERGGEGAATGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVVAA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLISDSV
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Carg19727 vs. NCBI nr
Match: XP_022984240.1 (uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharacterized protein LOC111482612 [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MERGGEGAAAGTTAAATAASSSQT RPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLISDSV
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Carg19727 vs. NCBI nr
Match: XP_038905258.1 (uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 178/199 (89.45%), Postives = 186/199 (93.47%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MER GEGA      AA A+SSSQT RP RRVDPLLVTCRFFSV+TALTAILCIVSNVI+A
Sbjct: 1   MERDGEGA-----PAAAASSSSQTIRPRRRVDPLLVTCRFFSVLTALTAILCIVSNVISA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSD+FDGIFRCYAVVIA FVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDLFDGIFRCYAVVIACFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRAREEKET+KDRVVKDL
Sbjct: 121 RAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREEKETAKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLIS++V
Sbjct: 181 QELERQKQELEQLLISETV 194

[Close]

BLAST of Carg19727 vs. NCBI nr
Match: XP_008454462.1 (PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 8.0e-84
Identity = 171/199 (85.93%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MER GEGA A  +++++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+A
Sbjct: 1   MERNGEGAPA-ASSSSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVISA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKN+SDIFDGIFRCYAVVI FFVVLAETEWEFI KNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNQSDIFDGIFRCYAVVITFFVVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKDL
Sbjct: 121 RAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLIS++V
Sbjct: 181 QELERQKQELEQLLISETV 198

[Close]

BLAST of Carg19727 vs. ExPASy TrEMBL
Match: A0A6J1E3M8 (uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC111430498 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.2e-98
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLISDSV
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Carg19727 vs. ExPASy TrEMBL
Match: A0A6J1J849 (uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98
Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MERGGEGAAAGTTAAATAASSSQT RPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA
Sbjct: 1   MERGGEGAAAGTTAAATAASSSQTIRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL
Sbjct: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLISDSV
Sbjct: 181 QELERQKQELEQLLISDSV 199

[Close]

BLAST of Carg19727 vs. ExPASy TrEMBL
Match: A0A0A0KYH6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84
Identity = 172/200 (86.00%), Postives = 187/200 (93.50%), Query Frame = 0


Query: 1   MERGGEGA-AAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIA 60
           MER GEGA A    A+++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+
Sbjct: 1   MERNGEGAPALAPAASSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVIS 60

Query: 61  AIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVM 120
           AIRSFKN+SDIFDGIFRCYAVVIAFF VLAETEWEFI KNWKVLEYWAGRGMLQIFVAVM
Sbjct: 61  AIRSFKNQSDIFDGIFRCYAVVIAFFAVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVM 120

Query: 121 TRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKD 180
           TRAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKD
Sbjct: 121 TRAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKD 180

Query: 181 LQELERQKQELEQLLISDSV 200
           LQELERQKQELEQLLIS++V
Sbjct: 181 LQELERQKQELEQLLISETV 200

[Close]

BLAST of Carg19727 vs. ExPASy TrEMBL
Match: A0A1S3BY74 (uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84
Identity = 171/199 (85.93%), Postives = 188/199 (94.47%), Query Frame = 0


Query: 1   MERGGEGAAAGTTAAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAA 60
           MER GEGA A  +++++++SSSQ +RP R VDPLLVTCRFFSV+TALTAILCIVSNVI+A
Sbjct: 1   MERNGEGAPA-ASSSSSSSSSSQITRPRRSVDPLLVTCRFFSVITALTAILCIVSNVISA 60

Query: 61  IRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMT 120
           IRSFKN+SDIFDGIFRCYAVVI FFVVLAETEWEFI KNWKVLEYWAGRGMLQIFVAVMT
Sbjct: 61  IRSFKNQSDIFDGIFRCYAVVITFFVVLAETEWEFIFKNWKVLEYWAGRGMLQIFVAVMT 120

Query: 121 RAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDL 180
           RAFP YSVEQRE ILLQ+AASYLLLACGAVYVVSGILCIGFLKRARE+KET+KD+VVKDL
Sbjct: 121 RAFPVYSVEQRELILLQDAASYLLLACGAVYVVSGILCIGFLKRAREKKETAKDKVVKDL 180

Query: 181 QELERQKQELEQLLISDSV 200
           QELERQKQELEQLLIS++V
Sbjct: 181 QELERQKQELEQLLISETV 198

[Close]

BLAST of Carg19727 vs. ExPASy TrEMBL
Match: A0A6J1D697 (uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017704 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75
Identity = 159/204 (77.94%), Postives = 182/204 (89.22%), Query Frame = 0


Query: 1   MERGGEGAAAGTT----AAATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSN 60
           M + GE   AG T    A+++++SSS T+R GRRVDPLLVTCRFFSV+TALTAILCIV N
Sbjct: 1   MPKDGEEEVAGITPVPAASSSSSSSSHTTRHGRRVDPLLVTCRFFSVLTALTAILCIVVN 60

Query: 61  VIAAIRSFKNKSDIFDGIFRCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFV 120
           VI+A+RSFK+K+DIFDGIFRCYAV+IA FVVLAETEWEFI+K WKVLEYWAGRGMLQIFV
Sbjct: 61  VISAVRSFKDKADIFDGIFRCYAVLIASFVVLAETEWEFIIKFWKVLEYWAGRGMLQIFV 120

Query: 121 AVMTRAFPAYSVEQREFILLQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRV 180
           AVMTRAFPAYS +QRE I+LQ+ ASYLLL CGAVYV SGILC+GFLKRAREEKET+K+R 
Sbjct: 121 AVMTRAFPAYSEDQRELIILQDVASYLLLGCGAVYVASGILCLGFLKRAREEKETAKERT 180

Query: 181 VKDLQELERQKQELE-QLLISDSV 200
           VKDLQELERQKQELE +LLI++SV
Sbjct: 181 VKDLQELERQKQELERRLLIAESV 204

[Close]

BLAST of Carg19727 vs. TAIR 10
Match: AT4G33625.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 59 Blast hits to 59 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 237.7 bits (605), Expect = 8.3e-63
Identity = 121/180 (67.22%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 16  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIF 75
           A  +S S   + G R DP LV CR FS+VT+L AILC+V NV+AA+RSF++  D+FDGIF
Sbjct: 12  AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query: 76  RCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFIL 135
           RCYAVVIA FVVL ETEW FILK  KVLEYWAGRGMLQIFVAVMTRAFP Y  ++++ +L
Sbjct: 72  RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLL 131

Query: 136 LQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI 195
           LQ  ASYLLLACG +YV+SG+LCIGFLKRAR++KE S+++ VKDL+E+ R+K+ELEQLL+
Sbjct: 132 LQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDLEEIARRKEELEQLLL 191

[Close]

BLAST of Carg19727 vs. TAIR 10
Match: AT4G33625.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 232.6 bits (592), Expect = 2.7e-61
Identity = 121/180 (67.22%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 16  ATAASSSQTSRPGRRVDPLLVTCRFFSVVTALTAILCIVSNVIAAIRSFKNKSDIFDGIF 75
           A  +S S   + G R DP LV CR FS+VT+L AILC+V NV+AA+RSF++  D+FDGIF
Sbjct: 12  AGPSSGSAKLKLGNRADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIF 71

Query: 76  RCYAVVIAFFVVLAETEWEFILKNWKVLEYWAGRGMLQIFVAVMTRAFPAYSVEQREFIL 135
           RCYAVVIA FVVL ETEW FILK  KVLEYWAGRGMLQIFVAVMTRAFP Y  ++++ +L
Sbjct: 72  RCYAVVIACFVVLVETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLL 131

Query: 136 LQEAASYLLLACGAVYVVSGILCIGFLKRAREEKETSKDRVVKDLQELERQKQELEQLLI 195
           LQ  ASYLLLACG +YV+SG+LCIGFLKRAR++KE S+++ VKDL E+ R+K+ELEQLL+
Sbjct: 132 LQNIASYLLLACGVIYVISGVLCIGFLKRARQQKEVSREQAVKDL-EIARRKEELEQLLL 190

The following BLAST results are available for this feature:

BLAST of Carg19727 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022922529.1	2.6e-98	100.00	uncharacterized protein LOC111430498 [Cucurbita moschata] >KAG6576880.1 hypothet...	[more]
XP_023552582.1	9.7e-98	98.99	uncharacterized protein LOC111810200 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022984240.1	1.3e-97	99.50	uncharacterized protein LOC111482612 [Cucurbita maxima] >XP_022984241.1 uncharac...	[more]
XP_038905258.1	1.1e-85	89.45	uncharacterized protein LOC120091338 isoform X1 [Benincasa hispida]	[more]
XP_008454462.1	8.0e-84	85.93	PREDICTED: uncharacterized protein LOC103494861 [Cucumis melo]	[more]

BLAST of Carg19727 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E3M8	1.2e-98	100.00	uncharacterized protein LOC111430498 OS=Cucurbita moschata OX=3662 GN=LOC1114304...	[more]
A0A6J1J849	6.2e-98	99.50	uncharacterized protein LOC111482612 OS=Cucurbita maxima OX=3661 GN=LOC111482612...	[more]
A0A0A0KYH6	3.9e-84	86.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G182250 PE=4 SV=1	[more]
A0A1S3BY74	3.9e-84	85.93	uncharacterized protein LOC103494861 OS=Cucumis melo OX=3656 GN=LOC103494861 PE=...	[more]
A0A6J1D697	1.1e-75	77.94	uncharacterized protein LOC111017704 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]

BLAST of Carg19727 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33625.1	8.3e-63	67.22	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G33625.2	2.7e-61	67.22	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 162..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..28
None	No IPR available	PANTHER	PTHR34965	OS07G0118300 PROTEIN	coord: 15..197
IPR013714	Golgi apparatus membrane protein TVP15	PFAM	PF08507	COPI_assoc	coord: 38..161 e-value: 2.4E-7 score: 30.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19727-RA	Carg19727-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane