|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAACAAGGAGGGGTCTGAAAGACAGACACCCAAAACGGAGAGCTACAACAAATCCCTCTCGCGCTGAACGTATTGGGCAGAGATTTGTCTGAATGAGGTACTAAATCTGTTCATTATTTACAAGTTGCAATCTCTTCAGCTGCTACACAATTGTGAATCAATCAAACCTTTGATACAACAACAGGGCTGTAAAATCTCCAGATAGAGGTCGGATTCAACCTCGCTATGGCCCTGAAGAAGAAGAAGAAGGGAGAAAGGGGAAGAGGAGGGGAAATAAATGTGAATCAGGTTTAGAGTCTTTTGAGTTTTTTGTACTCTTTTTTCGTGTACACATTATTACACTTATATACACATACGTTTCAATGTGAATCAAAGTGCAAAGCTTTTGCGGGGCGTGAAACTTGGATTCTAATATGATATTCCTAGATAACCCAGCTTTTTCTTTCTAATACTTTTCTAACCCTTGAATCCAGGGAGAGGAAATAAAGCCTGGATCCATCAACATTTCGTCTTCCTTCCATTAA mRNA sequence ATGGCAACAAGGAGGGGTCTGAAAGACAGACACCCAAAACGGAGAGCTACAACAAATCCCTCTCGCGCTGAACGTATTGGGCAGAGATTTATAGAGGTCGGATTCAACCTCGCTATGGCCCTGAAGAAGAAGAAGAAGGGAGAAAGGGGAAGAGGAGGGGAAATAAATGTGAATCAGGGAGAGGAAATAAAGCCTGGATCCATCAACATTTCGTCTTCCTTCCATTAA Coding sequence (CDS) ATGGCAACAAGGAGGGGTCTGAAAGACAGACACCCAAAACGGAGAGCTACAACAAATCCCTCTCGCGCTGAACGTATTGGGCAGAGATTTATAGAGGTCGGATTCAACCTCGCTATGGCCCTGAAGAAGAAGAAGAAGGGAGAAAGGGGAAGAGGAGGGGAAATAAATGTGAATCAGGGAGAGGAAATAAAGCCTGGATCCATCAACATTTCGTCTTCCTTCCATTAA Protein sequence MATRRGLKDRHPKRRATTNPSRAERIGQRFIEVGFNLAMALKKKKKGERGRGGEINVNQGEEIKPGSINISSSFH
Homology
BLAST of Carg19717 vs. NCBI nr
Match: KAG7014914.1 (hypothetical protein SDJN02_22545, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.9 bits (372), Expect = 3.5e-32 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 Query: 1 MATRRGLKDRHPKRRATTNPSRAERIGQRFIEVGFNLAMALKKKKKGERGRGGEINVNQG 60 MATRRGLKDRHPKRRATTNPSRAERIGQRFIEVGFNLAMALKKKKKGERGRGGEINVNQG Sbjct: 1 MATRRGLKDRHPKRRATTNPSRAERIGQRFIEVGFNLAMALKKKKKGERGRGGEINVNQG 60
Query: 61 EEIKPGSINISSSFH 76 EEIKPGSINISSSFH Sbjct: 61 EEIKPGSINISSSFH 75
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7014914.1 | 3.5e-32 | 100.00 | hypothetical protein SDJN02_22545, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 42..75 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..25 |
Relationships
The following mRNA feature(s) are a part of this gene:
|