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Carg19698 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCAAACTCTTAACCTCCATCTTCACATTCCTCTTCCTTTTCTTCTCCTTTGTCTCCTCGGCAACCACCATCGGCGCTCAGCCTGTGCCTGTTCCAGGCTTTTCAAATGCTTTTCCCGGGACTTCTCGAGACGGGGTACGTAAATTTATCAGCAATTGCTCTTGTTAATATGTCTTTCTATAAAGAAAGAAAATTGTAGTGAATATTGTGTGCTTTTTTTCCTTCTTTTTGGGAAGTTGAAGGCTGGGGATGATGCTTTGGAGGAGGAGAGTTGTGAAGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAGCCAGAGGAAGCCATGA ATGGCTTCCAAACTCTTAACCTCCATCTTCACATTCCTCTTCCTTTTCTTCTCCTTTGTCTCCTCGGCAACCACCATCGGCGCTCAGCCTGTGCCTGTTCCAGGCTTTTCAAATGCTTTTCCCGGGACTTCTCGAGACGGGTTGAAGGCTGGGGATGATGCTTTGGAGGAGGAGAGTTGTGAAGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAGCCAGAGGAAGCCATGA ATGGCTTCCAAACTCTTAACCTCCATCTTCACATTCCTCTTCCTTTTCTTCTCCTTTGTCTCCTCGGCAACCACCATCGGCGCTCAGCCTGTGCCTGTTCCAGGCTTTTCAAATGCTTTTCCCGGGACTTCTCGAGACGGGTTGAAGGCTGGGGATGATGCTTTGGAGGAGGAGAGTTGTGAAGAAATTGGAGAAGAATATTGCTTGATGAGGAAAACTCTTGCAGCCCATGCTGATTATATCTACACAGATAGCCAGAGGAAGCCATGA MASKLLTSIFTFLFLFFSFVSSATTIGAQPVPVPGFSNAFPGTSRDGLKAGDDALEEESCEEIGEEYCLMRKTLAAHADYIYTDSQRKP Homology
BLAST of Carg19698 vs. NCBI nr
Match: KAG7014931.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176.8 bits (447), Expect = 8.3e-41 Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg19698 vs. NCBI nr
Match: XP_022922962.1 (phytosulfokines-like [Cucurbita moschata] >KAG6576906.1 Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.3 bits (443), Expect = 2.4e-40 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg19698 vs. NCBI nr
Match: XP_022984884.1 (phytosulfokines-like [Cucurbita maxima]) HSP 1 Score: 168.7 bits (426), Expect = 2.3e-38 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Carg19698 vs. NCBI nr
Match: XP_004150263.1 (phytosulfokines 3 [Cucumis sativus]) HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24 Identity = 66/88 (75.00%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Carg19698 vs. NCBI nr
Match: KAA0044319.1 (Phytosulfokines 3 precursor family protein [Cucumis melo var. makuwa]) HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22 Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-04 Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.8e-04 Identity = 28/83 (33.73%), Postives = 40/83 (48.19%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy TrEMBL
Match: A0A6J1E4U5 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111430788 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.2e-40 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy TrEMBL
Match: A0A6J1JBS4 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111483027 PE=3 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38 Identity = 85/89 (95.51%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy TrEMBL
Match: A0A0A0KY18 (Phytosulfokine-beta OS=Cucumis sativus OX=3659 GN=Csa_4G000620 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24 Identity = 66/88 (75.00%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy TrEMBL
Match: A0A5A7TSX1 (Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00410 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 6.5e-23 Identity = 64/87 (73.56%), Postives = 71/87 (81.61%), Query Frame = 0
BLAST of Carg19698 vs. ExPASy TrEMBL
Match: A0A6J1FNZ6 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447189 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22 Identity = 62/87 (71.26%), Postives = 70/87 (80.46%), Query Frame = 0
BLAST of Carg19698 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor ) HSP 1 Score: 47.4 bits (111), Expect = 7.1e-06 Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of Carg19698 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor ) HSP 1 Score: 42.0 bits (97), Expect = 3.0e-04 Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of Carg19698 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor ) HSP 1 Score: 40.4 bits (93), Expect = 8.7e-04 Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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