Carg19694 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19694
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	Carg_Chr16: 1729795 .. 1731609 (+)
RNA-Seq Expression	Carg19694
Synteny	Carg19694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTATTTTGCTGTTTTTTGTTATGATTTTGGTGTTTTTAGTGTTGGATCGGTGGGATTGTGGTGTGCGATTGTAGATCTGTGTATGTTTTGTGTTGATTAAGAGTATTGATGGTTGTTTTAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGTAAGTCGCTCTCTCTTGATTTCTCCATTTTTACCTGTTCAAGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGGTAATGCGTTCAGCCTCGGTTTCATCGCCCTAATGAAATCCCCAAATTGCCCCCCAGTTAGCCTCTATATTACAGTCTTGTTTAATATCTATTTTATTTTAATCTGGGAAGCTTAAGAAATTATAATGTTTATCATTTTAATTGTTGCAAACGAACCATACTGTACAAGATCATTGAAACCAATTTTTTAGCATACAATGATATTAGCCATTTTCTAATGGTTTCCAGATCAATGTTGAGCTGTCTGTCCTCTCAATTTAGGAAAACAAATAGATTATCCTAAAGAATTTAGTATTAATGGTAAAATTCTTTGATTTTCGGGGTGGATCTTGATTGATGGATCAAATTGTGAAGGATCCAACATTGTGGGATAATTTGTTCATCTGTGTATTGACCATCATCATTAGTCTAAATCTAATATTTTGTCATTTATTTTAAAACACTCATAATTCTTCCAAAATTTGTTAGATAAAGACCTCCAAAGCGAGTAGCTATCCATGATGATGTTTAAGTCCCAATTTTCGTTACAGTTAGCTATCACACTATTCCAAAACTCAATTTTGTTAGATGCAAGTATCGATTAGGACTACTATTATCTTCATTAATATGAGATTTCATGTGTTAAAGTAGATAATATCATGTGATTACGTAGATATGCGAAGGATCGATTGTTGTTACGTTAAATTTGTACCAAATTGGTATCAATTTGGGATGAGTTTGATACTAAAATTGAGTATGATATGAACTGTGTGTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTTTTTTTTTTTTTT

mRNA sequence

CAAACAAACATAACCTTCTCTGTTTGTCGGTAATCTCAAACTCTGTCTTCGGATTATATATACAAATCCTTCAGATCCCAATCTTCTTCTCTGTACTTCGCAGACCTTCGCTGTCGTCTCCATTAACTCCTCCATCTATCTTCAGTTTTTCCTTCATTTTTTTGTTTTTGTTTTTGTGAATTCCGGCCGGATTCGTCGACGTTGTTCGGCGGTCGGGATTGATTGTGTTGAGAGGGAGATATCTTGTGATTTGAAGAGGAAGTAGAAGAGATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAAAGCTTTTCCCTAAGAGAAAAAAGATTGAAACTGGGCGTTCAATTTGTGAAGTTTTTAATTTGTTGCGTTTATTGATTATAATAGTCTAGTGCTTGTTCCTCCCTCGTTCCCTCCATTTTTCTTATATAAATAACACCCCCTTATCTCTCTCTAGTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGCCAGGCTCCGGTTGGAGTGCCTCCGCCTCATGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATATCCACCGCAGGGATATCCACCCCCAGGATATCCGCCGCAGGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCAGTACGGTCAACCTCCTCCTCCTCAACAGCAAAGTAGCAGCTCTGGTTGCTTGCAAGGCTGGCGGTTGAAATCGGATCTGAATCATTCCGATGATATGGTATCGGAAACTGAATTCAGAACGAGCCAATTGCATCGTCTGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTCGACGCCTGCTTCTGAAGAGACCCCATGTGCAGTGTGTGGTGGGCGGGCTTCAAATTCAAGAACTATCTCTCTCTCTCTCTCAGTAA

Protein sequence

MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLLLPARRLLLKRPHVQCVVGGLQIQELSLSLSQ

Homology

[Close]

BLAST of Carg19694 vs. NCBI nr
Match: KAG7014935.1 (Cysteine-rich and transmembrane domain-containing protein WIH2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.1 bits (767), Expect = 1.1e-77
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLL 120
           PPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLL
Sbjct: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLL 120

Query: 121 LPARRLLLKRPHVQCVVGGLQIQELSLSLSQ 152
           LPARRLLLKRPHVQCVVGGLQIQELSLSLSQ
Sbjct: 121 LPARRLLLKRPHVQCVVGGLQIQELSLSLSQ 151

[Close]

BLAST of Carg19694 vs. NCBI nr
Match: KAG6576909.1 (Cysteine-rich and transmembrane domain-containing protein WIH2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 37  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 96

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQG 87
           PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 97  PPPYAPQYGQPPPPQQQSSSSGCLQG 122

[Close]

BLAST of Carg19694 vs. NCBI nr
Match: XP_022922446.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata])

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 86

[Close]

BLAST of Carg19694 vs. NCBI nr
Match: XP_022985146.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima])

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1  MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 86

[Close]

BLAST of Carg19694 vs. NCBI nr
Match: XP_023551906.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-38
Identity = 84/86 (97.67%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQGQAP+GVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1  MSYYNQGQAPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 86

[Close]

BLAST of Carg19694 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-23
Identity = 66/86 (76.74%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQY  PP  QQQ SS G L+G
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Carg19694 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.6e-13
Identity = 56/86 (65.12%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 5  NQGQAPVGVPPPHGYPPEGYPKDAYPPPG--YPPQGYPPP-GYPPQGYPPPGAYPPQGYP 64
          +Q    VGVPP H YP EG PKDAYPPPG  YP QGYPPP GYP QGYPP G YPPQGYP
Sbjct: 2  SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQG-YPPQGYP 61

Query: 65 PPYAPQYGQPPPPQQQSS-SSGCLQG 87
              PQ G PP  QQQ   S G L+G
Sbjct: 62 EQGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of Carg19694 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.0e-10
Identity = 48/83 (57.83%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 4  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPP 63
          Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP 
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGY-AQG------YPAQGYPP- 61

Query: 64 YAPQYGQPPPPQQQSSSSGCLQG 87
            PQY Q P   QQ  ++G L+G
Sbjct: 62 --PQYSQAP---QQKQNAGMLEG 67

[Close]

BLAST of Carg19694 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.7e-09
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 14  PPPHGYPPEGY-PKDAYPPP-GYPPQGYPPPGYPPQGYPPPGAYP----PQGYPP 63
           PPP GYPP+GY P+ AYPPP GYPPQGYPP GYPPQGYPP GA P    PQG PP
Sbjct: 391 PPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPP 445

[Close]

BLAST of Carg19694 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 39/56 (69.64%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 15  PPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGY-PPPGAYPPQGYPPPYAPQYG 70
           PP GYPP+GYP    PP GYPPQGYPP GYPPQGY PPP   PPQG PP  AP  G
Sbjct: 384 PPQGYPPQGYPPP--PPQGYPPQGYPPQGYPPQGYPPPPQGPPPQGPPPQAAPPQG 437

[Close]

BLAST of Carg19694 vs. ExPASy TrEMBL
Match: A0A6J1E456 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111430460 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 9.9e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 86

[Close]

BLAST of Carg19694 vs. ExPASy TrEMBL
Match: A0A6J1J7A9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111483235 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.4e-39
Identity = 85/86 (98.84%), Postives = 85/86 (98.84%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQGQAPVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY
Sbjct: 1  MSYYNQGQAPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQYGQPPPPQQQSSSSGCLQG
Sbjct: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 86

[Close]

BLAST of Carg19694 vs. ExPASy TrEMBL
Match: A0A2C9V6I2 (Rhodopsin OS=Manihot esculenta OX=3983 GN=MANES_10G084200 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.5e-29
Identity = 77/89 (86.52%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP G YPPQGY
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPQG-YPPQGY 60

Query: 61 ---PPPYAPQYGQPPPPQQQSSSSGCLQG 87
             PP YAPQYGQPPPP QQ+SSSGCL+G
Sbjct: 61 GPPPPGYAPQYGQPPPP-QQNSSSGCLEG 87

[Close]

BLAST of Carg19694 vs. ExPASy TrEMBL
Match: A0A498JNY6 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007804 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.6e-29
Identity = 83/128 (64.84%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQGYP    PPQGY       PQGY
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYP----PPQGY-------PQGY 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRLFGCAVLL 120
           PPPYAPQY Q PPPQQQ++SSG ++GW +   L          EF T     LFGC+VLL
Sbjct: 61  PPPYAPQYAQ-PPPQQQNNSSGLMEGWYIWLGL---------VEFCTESTRSLFGCSVLL 107

Query: 121 LPARRLLL 129
           L AR LLL
Sbjct: 121 LSARCLLL 107

[Close]

BLAST of Carg19694 vs. ExPASy TrEMBL
Match: A0A314YZL0 (Cysteine-rich and transmembrane domain-containing protein A OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07453 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.3e-28
Identity = 87/131 (66.41%), Postives = 92/131 (70.23%), Query Frame = 0


Query: 1   MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
           MSYYNQ Q PVGVPPP GYPPEGYPKDAYPPPGYPPQ     GYP QGYPPP  Y  Q Y
Sbjct: 1   MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQ-----GYPQQGYPPPQGYAQQ-Y 60

Query: 61  PPPYAPQYGQPPPPQQQSSSSGCLQGWRLKSDLNHSDDMVSETEFRTSQLHRL--FGCAV 120
           PPPYAPQY Q PPPQQQSSSSGCL+GW  K         + +  F   QLH +  FGC+V
Sbjct: 61  PPPYAPQYAQ-PPPQQQSSSSGCLEGWSYKR------QQLFDLFF---QLHEMLQFGCSV 115

Query: 121 LLLPARRLLLK 130
           LLL A  LLLK
Sbjct: 121 LLLSAGCLLLK 115

[Close]

BLAST of Carg19694 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 66/86 (76.74%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 1  MSYYNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGY 60
          MS YN  Q PVGVPPP GYPPEGYPKDAYPP GYPPQGYP  GYPPQGYP  G YP QGY
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQG-YPQQGY 60

Query: 61 PPPYAPQYGQPPPPQQQSSSSGCLQG 87
          PPPYAPQY  PP  QQQ SS G L+G
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Carg19694 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.5 bits (158), Expect = 4.3e-11
Identity = 48/83 (57.83%), Postives = 52/83 (62.65%), Query Frame = 0


Query: 4  YNQGQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPPPGAYPPQGYPPP 63
          Y+Q Q PVG PPP GYP    PKD YPP GYPP GYPPPGY  QG      YP QGYPP 
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGY-AQG------YPAQGYPP- 61

Query: 64 YAPQYGQPPPPQQQSSSSGCLQG 87
            PQY Q P   QQ  ++G L+G
Sbjct: 62 --PQYSQAP---QQKQNAGMLEG 67

[Close]

BLAST of Carg19694 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 7.3e-11
Identity = 49/85 (57.65%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 4  YNQGQAPVGVPPPHGYPP-EGYPKDAYPPP-GYPPQGYPPPGYPPQGYPPP-----GAYP 63
          Y   Q PV  PPP GYPP EGYP   YPPP GYPP  YP  GYPP GYPPP       YP
Sbjct: 3  YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64 PQGYPPPYAPQ-------YGQPPPP 75
           QGYPPP  PQ       Y  PPPP
Sbjct: 63 AQGYPPPQYPQGHPPQYPYQGPPPP 87

[Close]

BLAST of Carg19694 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein )

HSP 1 Score: 57.8 bits (138), Expect = 8.9e-09
Identity = 41/60 (68.33%), Postives = 43/60 (71.67%), Query Frame = 0


Query: 17 HGYPPEGY---PKDAYPPP-GYPPQGYPPP--GYPPQGY-PPPGAYPPQGYPPPYAPQYG 70
          HGYPP  Y   P+ AYPPP GYPPQGYPPP  GYPP  Y PPPGAYPP GYP P  P+ G
Sbjct: 22 HGYPPGAYPPPPQGAYPPPGGYPPQGYPPPPHGYPPAAYPPPPGAYPPAGYPGPSGPRPG 81

[Close]

BLAST of Carg19694 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-08
Identity = 42/72 (58.33%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 7  GQAPVGVPPPHGYPPEGYPKDAYPPPGYPPQGYPPPGYPPQGYPP-PGAYPPQ----GYP 66
          G  P G PPP  YPP GYP+  YPP   PP  YPP GYPP  YPP PG YPP     GYP
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPP---PPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYP 74

Query: 67 PPYAPQYGQPPP 74
          P  AP YG  PP
Sbjct: 75 P--APGYGGYPP 81

The following BLAST results are available for this feature:

BLAST of Carg19694 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014935.1	1.1e-77	100.00	Cysteine-rich and transmembrane domain-containing protein WIH2 [Cucurbita argyro...	[more]
KAG6576909.1	2.0e-39	100.00	Cysteine-rich and transmembrane domain-containing protein WIH2, partial [Cucurbi...	[more]
XP_022922446.1	2.0e-39	100.00	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]
XP_022985146.1	1.7e-38	98.84	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]
XP_023551906.1	2.3e-38	97.67	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita p...	[more]

BLAST of Carg19694 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	2.8e-23	76.74	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q8LCL8	7.6e-13	65.12	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
Q9FJW3	6.0e-10	57.83	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
P09241	8.7e-09	74.55	Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1	[more]
Q17094	1.6e-07	69.64	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]

BLAST of Carg19694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E456	9.9e-40	100.00	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1J7A9	8.4e-39	98.84	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A2C9V6I2	3.5e-29	86.52	Rhodopsin OS=Manihot esculenta OX=3983 GN=MANES_10G084200 PE=3 SV=1	[more]
A0A498JNY6	4.6e-29	64.84	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_007804 PE=4 SV=1	[more]
A0A314YZL0	2.3e-28	66.41	Cysteine-rich and transmembrane domain-containing protein A OS=Prunus yedoensis ...	[more]

BLAST of Carg19694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	2.0e-24	76.74	proline-rich family protein	[more]
AT5G67600.1	4.3e-11	57.83	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	7.3e-11	57.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G31750.1	8.9e-09	68.33	proline-rich family protein	[more]
AT5G45350.1	4.4e-08	58.33	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..73
None	No IPR available	PANTHER	PTHR31568:SF83	UV-INDUCED PROTEIN UVI15-RELATED	coord: 1..86
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19694-RA	Carg19694-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane