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Carg19693 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGTAAATAATGATGTTTTAGTAGTCTTTAGCTCACTATTTCACAACTCTTTTATGTGAACTTTTGGTAGTTCTTCATATTCGTTGGAAGAGGAATTGTATTTATATTATTTTTTTGTTATTTTTTTCGTATTCTGTCCTGTCGTTTCTGGGGTGAACAGTTCTTTGTTTTTTCGTATCTTTGATCTTGCTTGATTTTTCTTCTGATTTTCCCGTATTGCTTTTTCTTGCCAATCTTCTTCAACATTTGTATCTGTTGGGTTTTTCAAACGTTTTTGTATATTTTAGGACAATGCTATTATCTCATTGCCAATATTCTATAGTAATGCAAAAGTGTAAAGTCGAATACTAATATGCTAGTATTTAGTACCTGAATTTTTTTGGGTTTTGAAGATCAGTAGTAGCATTTATGGTGATTTGTTTTGTATTGACATTGTATTGATTGAATGAAATCCAATCTTAAGTGCTGAGGATAATGTCAACATGCGACTATTAGGCAGCCCCTAGATCGCTTCGGCTAGTATCATTTGGTTCAAGCTTGGGTCCACATTCATCAACGCGCCACCTGATTTGAGTATTTTAGCAGTCCAGATTGGTACGGACCGAAATTTCTTAATTATTATACATTAGGTTCTGAGATAAAGCTCCTTTAGCATTTATTGTGATGAGTGTTAAGTATCATGTGCTTAAACATCACAATCATAAATCCTGATCCTTTTCAATCTTCTGTAGAAGGATCAGAACTAATCGTGCACTGTCAGTATGTTACAAGTTAAGCGAGGCTTGAAATCTGTTGTAGTTGGGACTTAGAAGCTTACATATGAATTGGGGTTAAATTATTAGCTGATTTGAAGAAGAAATCTAGAAATATTTTGATAGAAAATGAATATTATATTTACAGAGATGTAACACTAGAGGAATGGGATAAAATACCACCCAATCAATAGCCTCAAGGCCAAGGGTTGCAAAATGGATTTCAAATTGGCATGAACTGTAGCAAGATAGTAATTAGGGAGAGCTCAATTTGAAGGGATGAATGTCAATAAATGTAGAACTACAAGTTTCACTTTCAACATTGGGAAACTGCCTCCTATTCCTCTCATTTCACAATGAAAGGCCTGTGGAACATATCATGAGAGACCAAAATTTCTAAACAGAAAATTGTAGATTGTTTAAGTTAAGCTACACTCAAAAAGGTTGATCAATGTTATTGCTTTTACACTTTATTTGGCAATGGCTTGTTTCTTTTAAATGGTAAAATAACAAAATTCGAGAGATTTATCTTCTCCCTTGTTTTCCAGGAAAAAACGTTGAGCATGTTTTTTAGCCGTTCAACTAGATTTTCTAATCACATTTTTATCATTTTCAAATTACTGGGTTATCTAAGCTTTAGGGACTCCATCACGTTTTTACCTCTAGAATAATATGGGTTTTTCAAATTGGCTCTAGTTTTGAATCATTATCACGAAACTCTCCCCGGACTCTGTCATGTTTTTTTAAGTGTGAAATGGAATTTTTTTTAAAAACAAATGATCTATGGCTGCTAGCTGCAAGAAGCAATCTAATTTTCCTGGCGCGTTTATTTCTTTTGTATTCTGAATAAATGTATCTTCATGCCCCACTTATATAGAACGAAAAAAGACAAGATAAAGGGAGTCCAGAGTAAGAAGCACAGACTCAGAATCATTGAATGAAGAGAGTAATAAACGGATTAGGGCATGAGAAGAGGATCTAGGAGTTAGGATGTACGGAAGGTCAAGTTATCATAAGTGTCATGATGGGTCGTGTAGCTTTGGGAAATAAATTGGTCATAAACTACTTCTCATAAATCAAGTATTAGTCTCATATAATTAATGTAGACTCTATAAAACATAGATAATTAGACAAGAGGACCAAAAAAAATGATTGGGACACCATTGTGTACGGAAAAAAATGCAACAGCAAATAATTACATTTATCTATAAAGGTGGGAATATAATAATAGGGTTTTTACTATGCACTCTGAACATACGCTAAAGTCCGTGTATTATAGCATGCACTTGGGTAGTTCCAGAGCATGAGGATGTTCAAAAATGCTTTAGTATATTGTTCTGGTTCTGTTTTTTAAGACTATTATTTTTTATCCACGGATTAGCTAACTACCAACTCTCCTCATAACTTTGAGGTCAATTATTCTACGCCTTGAGGTGGTGGATCGGTGGTCAACGATCTCACATCAGTTTCTTCGTCTTCGGCGCTACAAAGATATACCTCTATATATTAAGAGTAGTCTCTTTTCATCAAATGCTCAAAGACTACTATCTTACTTACTAATTTGAAGATCTCCTTCTGTCATTTACTCCTCCGTATTGAATGCACAGGAGAACATAGAAATGGAGAAATGGTTGTTTCGGTCTGAACATCCAATTAGAATGTTCGATCCTCTTACATAATTTAGGACCTTCGTTTCTTTACTTAAAATAAATCTGTATACTTTCCTCTTCCTTCATTCCTCATTTACAACTCACTTTTTCCCCACATCCTCCCCAGCACCTTGTCCATGGAACAAAGACAAATAGTCTCGGCTTAAAGCACAAAGTTTAGAACAAAACCTAATTTAATGTATTCGACACTTCGAGCTTATCGATTTATATTCATGATGCTAGTGCTCATCTTCTGAAAACAAGGGGCAAAAACGGCTTCTATTGATTGGTAACTATTAATTTTTGGATTGATAGGAGAGTTATATTGATTATTCTGAATCCTTGGTGACTGATTCAAGTGCTCATCAATGAGTAGTTAGTTCTCAATAATCGACTGATTCAAGTGACATTCAACATTTGTCAGAAACTTCGGTACAATTTGTAGTTATGTTTCGAATCACCTGTGGCTTTTGATGTTATAATTTTTATATCCTTCTTTTCAAGATCTTCACCCTTCTCTTTTTCTAATTACACTTTTTTTATGTCCATTCGAAAAGTTAGTTGCAACTCCTTACTTTGTGCAGGGGCTTCCCCTTTTGGATGTGAAATCATATTTTCATAATTATTCTTCCTGAAATTGAACTGTATTTGTCTTTGCTATTGTTGAGTTCTTTTTTTTTTTCCTTCCATCAATAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTAAGCAAATCTGATTTTCATTGTTGATTTCTTGAAAGAACAAAAAAAAAAAAAAAAAAAAAAAGAAAGAGAAGAAGAAAAGAAGAAAAGAAAAGAAAAGAGAAAACTCTTTTAAGTTACTTTGATTCCCTCGAGCTATTTATTCTTTTCTATTGTTGTTTACTTCAAATAATAATCATAGTGTATTGTTCCTAGTGGAATGGTTTGGTTGCTGCATTATACTCCTATATTAGCGATATCTGTGATGATATATTTCAACTTTTGAGACAAGTGAAATATAATAATATTGTGAAATAATTTGCTGAGAAATTCACTATTATTCTCTGGAGAAAGACAATCATATTTAATTCTGGGAAGATGATTGGATTGCCGGGTTTCCTTTCTTTCCTCTTTTTCCTTGGTTATATGACGTTATCTATGTCAAGTTTGCTGCCATCACTTCCCTCCCAGCCCATTCTTCAGGACCCTCCTAGGTATTAGCTTAGCACAAATGTTAATCTCAATTACCTGCTTGACTACTTTTGATGGGCTGAGCCTTAAGGAGTCGATTCTTTCTTATGTTGTACTATTGATAGACTAAAATATATCACCTCTCCCCAACGTTTTGAGCGTTAAATTTAGTTTCGTTTTGTCCAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGGTAAACTGTATTATTATTTATTTATACTGTTGAAATTGCATGAGTATCTATTTTTTGTTTCTTAATTCCATTGGGTTTATGAGTCAATAAGTTTGATCCGTTTATCCATATTATACCGAGGGATGTGACAATTACTAGAATCCACAATACCTTTACTTATTGGAGCAATCTTAGAAACAAATTAGGTTCTTTATTAGCGAATAATTTCCTTGCTACAATTACAAATACCATATATGGGAATATTAGAGGTTAAGGATTCTGATTCAATCGAAGTGGTATTATCTCGAGAGTTTGGAAATTTAATTGAATACCTGAGGCAAATATAGTAAAATGTTGAGAAGTAATTCAAGGAACCCGAAGACTTTTTTGTTTTGAATATGCAGTTGTGGAGTATGGAGACGTGAATCTCCGACCTTAAGGGAGGAAATACATGTCAATTACTATTGAACTATGCTTTATATTAGAGTACTTTTTTTAGTATGCTCATCCCTGAACGAACAGCTACATAATTACTTGCTTTCATCTCCTTGTATAACCCATGTCTCCTGCTAACAAACTCCTTGGCTAATGATCTTATTATACCCTTAGTTTCCTAAAACAGTTTTGGTCTGGGATTCTTTCAACCAGCATTGTTGTCATTCAAGCCTTACTTTTGCTTTAACATTCTGACGTGGTTAACGAATATCTCAAAAATGCATTTTGTTTGATACACGTCAGCAGATGATTCGGGTTTGATGGAAAGCAAAAACTGACTTGGAGAATTTGTGGAGCTGTACTTAAAGGGATTGACATGTTTCACGCTCGCTATCGATTAAGCATTATAGCAACCTTTCCCCCACCATTTTCAATCGGGTTTTGGGCAATTCGAGCAACAGGGTCATGTCTGACTAGAAGACTGGATATCAAAACAAGGAGGAACATTCTGTGGGTTTAGATAGTTGCATGTAAAAATGTGTATTGCTTTTAGTGTAGGATACCTGTGGTCTTTTATCTATGCTCTCTGATGTTAATGAATTACTGCCATTGTTCATTTCAATTGGTCTGATACTTCTGGAGTTGTATTAATGTAAACAATGAAAAAGGATAGGAAAATAAATGGGATTTAAACAAAAAAAGACCAAAATTTTAT ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGATGATTCGGGTTTGATGGAAAGCAAAAACTGACTTGGAGAATTTGTGGAGCTGTACTTAAAGGGATTGACATGTTTCACGCTCGCTATCGATTAAGCATTATAGCAACCTTTCCCCCACCATTTTCAATCGGGTTTTGGGCAATTCGAGCAACAGGGTCATGTCTGACTAGAAGACTGGATATCAAAACAAGGAGGAACATTCTGTGGGTTTAGATAGTTGCATGTAAAAATGTGTATTGCTTTTAGTGTAGGATACCTGTGGTCTTTTATCTATGCTCTCTGATGTTAATGAATTACTGCCATTGTTCATTTCAATTGGTCTGATACTTCTGGAGTTGTATTAATGTAAACAATGAAAAAGGATAGGAAAATAAATGGGATTTAAACAAAAAAAGACCAAAATTTTAT ATGGGTGCTCCGAAGCAGAAATGGACTAACGAAGAAGAAGCAGCCCTGAAGGCTGGAGTTGTTAAGCATGGAGCAGGAAAGTGGCGAACGATACTTAAGGATCCTGAATTCAGCAGTGTACTGTATCTTCGTTCAAATGTTGATCTCAAGGATCAATACTGGGCACCACCAGACTTCAAGAGGTTGTTATCATCAAAATTGAAGTTCTTAACAGCTAGTGGTAAACTGGTCAAGGTTAAACGAAAATATAGGCTTCCTCCAGTGATGCCTTCGTCAGAGAGAAGGAGCTCTATGTTATTCTTGGACGACCATCAAAGAGCTTCTTTAAGAACTGACAAGGACGAAATGTGTATTCTTGCTAAAGCTCAAATCGATCTTGAATTGGCCAAGATGAGAACCATGACTTCCCAAGAGGCAGCGGCAGCTGCTGCTCATGCAGTTGCAGAAGCAGAAGCAGCTATAGCAGAAGCTGAAGAAGCAGCAAGGGAAGCGGAGGCGGCTGAGGCTGATGCAGAAGCAGCACAATCATTTGCTGAAGCCGCAATGAAGACACTGAAAGGAAGAAATCTTCCAAAGATGATGATTCGGGTTTGA MGAPKQKWTNEEEAALKAGVVKHGAGKWRTILKDPEFSSVLYLRSNVDLKDQYWAPPDFKRLLSSKLKFLTASGKLVKVKRKYRLPPVMPSSERRSSMLFLDDHQRASLRTDKDEMCILAKAQIDLELAKMRTMTSQEAAAAAAHAVAEAEAAIAEAEEAAREAEAAEADAEAAQSFAEAAMKTLKGRNLPKMMIRV Homology
BLAST of Carg19693 vs. NCBI nr
Match: KAG7014936.1 (Telomere repeat-binding factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 360.5 bits (924), Expect = 9.0e-96 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg19693 vs. NCBI nr
Match: XP_023553535.1 (telomere repeat-binding factor 1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78 Identity = 197/333 (59.16%), Postives = 197/333 (59.16%), Query Frame = 0
BLAST of Carg19693 vs. NCBI nr
Match: XP_022922786.1 (telomere repeat-binding factor 1-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78 Identity = 197/333 (59.16%), Postives = 197/333 (59.16%), Query Frame = 0
BLAST of Carg19693 vs. NCBI nr
Match: XP_023553536.1 (telomere repeat-binding factor 1-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 300.8 bits (769), Expect = 8.5e-78 Identity = 197/330 (59.70%), Postives = 197/330 (59.70%), Query Frame = 0
BLAST of Carg19693 vs. NCBI nr
Match: XP_022922787.1 (telomere repeat-binding factor 1-like isoform X4 [Cucurbita moschata]) HSP 1 Score: 299.7 bits (766), Expect = 1.9e-77 Identity = 193/326 (59.20%), Postives = 194/326 (59.51%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy Swiss-Prot
Match: Q8VWK4 (Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.4e-51 Identity = 142/299 (47.49%), Postives = 163/299 (54.52%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy Swiss-Prot
Match: C0HIA3 (Single myb histone 6 OS=Zea mays OX=4577 GN=SMH6 PE=2 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.9e-46 Identity = 128/298 (42.95%), Postives = 156/298 (52.35%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy Swiss-Prot
Match: Q6WLH3 (Single myb histone 5 OS=Zea mays OX=4577 GN=SMH5 PE=2 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 1.6e-39 Identity = 120/297 (40.40%), Postives = 142/297 (47.81%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy Swiss-Prot
Match: Q9FJW5 (Telomere repeat-binding factor 2 OS=Arabidopsis thaliana OX=3702 GN=TRB2 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30 Identity = 108/293 (36.86%), Postives = 143/293 (48.81%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy Swiss-Prot
Match: Q9M2X3 (Telomere repeat-binding factor 3 OS=Arabidopsis thaliana OX=3702 GN=TRB3 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 9.9e-29 Identity = 110/290 (37.93%), Postives = 141/290 (48.62%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy TrEMBL
Match: A0A6J1E528 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430672 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 4.8e-79 Identity = 197/333 (59.16%), Postives = 197/333 (59.16%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy TrEMBL
Match: A0A6J1E4A7 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430672 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 9.1e-78 Identity = 193/326 (59.20%), Postives = 194/326 (59.51%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy TrEMBL
Match: A0A6J1E9S6 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430672 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.2e-77 Identity = 197/334 (58.98%), Postives = 197/334 (58.98%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy TrEMBL
Match: A0A6J1JBV4 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111483050 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 1.6e-77 Identity = 195/333 (58.56%), Postives = 195/333 (58.56%), Query Frame = 0
BLAST of Carg19693 vs. ExPASy TrEMBL
Match: A0A6J1E7T3 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111430672 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77 Identity = 193/330 (58.48%), Postives = 194/330 (58.79%), Query Frame = 0
BLAST of Carg19693 vs. TAIR 10
Match: AT1G49950.3 (telomere repeat binding factor 1 ) HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52 Identity = 142/299 (47.49%), Postives = 163/299 (54.52%), Query Frame = 0
BLAST of Carg19693 vs. TAIR 10
Match: AT1G49950.2 (telomere repeat binding factor 1 ) HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52 Identity = 142/299 (47.49%), Postives = 163/299 (54.52%), Query Frame = 0
BLAST of Carg19693 vs. TAIR 10
Match: AT1G49950.1 (telomere repeat binding factor 1 ) HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52 Identity = 142/299 (47.49%), Postives = 163/299 (54.52%), Query Frame = 0
BLAST of Carg19693 vs. TAIR 10
Match: AT5G67580.1 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31 Identity = 108/293 (36.86%), Postives = 143/293 (48.81%), Query Frame = 0
BLAST of Carg19693 vs. TAIR 10
Match: AT5G67580.2 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31 Identity = 108/293 (36.86%), Postives = 143/293 (48.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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