Carg19684 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19684
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH dehydrogenase subunit 4L
Location	Carg_Chr16: 1782208 .. 1783027 (-)
RNA-Seq Expression	Carg19684
Synteny	Carg19684

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTAACCTTCCTCGCTGAGAAAATGGCTAAGTGGGAAGGATTATTCAGAAAATTAATGATTTGTAAAACGTTATTATTTTTATTTTATTTTATTTTATTGTTTTAATTTGTTTGATTGTATTGGTTTGGTGAAGAACAATGTGTAAATTAAAGTGGTGGGTCTCCATGAAATGATGTGAACAGCCATTTTCTATGCCAATAAGATGTTTTTTTTTTTAAAGATTAATTAAAAAAAAAAAAAAAAAAAAAGTCGTCAAAGGTGAGTTCAGCTCAACATGAAATTTAGTGGGCAGCCATCTTCTTTGAATTTGACAATGGTACATTGATCGGTTCGACGTACGGTTCTTAACTTATTGGAGTTTCTATGATTATCTCTATTTTAGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

mRNA sequence

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

Coding sequence (CDS)

ATGGAGGGGTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCACGACTATAGAAGCCAATCCGTAGGTTCGAGCCGGAGCTACCATCTCTTGACTAACGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCGAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGGGTGCGTTTGGATCATCTTATGCTGGCCAGGTTTCAAATAATGGTATTCGGGGAATCCTCCTCAATAGACCAAGTATTCCTATTATGTCAATGTCAATTGAACCAATGTTATTAGCTGTGAATTCGAACTTTTTGGTATTTTTCGTTTGTTCGGATGATATGATGGGTCAATCATTTATTTCATTGGTTCCAACGGTGGTAGCTGCGGAATCTGCTATT

Protein sequence

MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI

Homology

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: KAG7014945.1 (NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 2.7e-73
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR 60
           MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR
Sbjct: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR 60

Query: 61  SGHELMHSRSVSKGAFGSSYAGQVSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVF 120
           SGHELMHSRSVSKGAFGSSYAGQVSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVF
Sbjct: 61  SGHELMHSRSVSKGAFGSSYAGQVSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVF 120

Query: 121 FVCSDDMMGQSFISLVPTVVAAESAI 147
           FVCSDDMMGQSFISLVPTVVAAESAI
Sbjct: 121 FVCSDDMMGQSFISLVPTVVAAESAI 146

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: KAG6576920.1 (hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.6 bits (457), Expect = 9.5e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR 60
          MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR
Sbjct: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDESSHRRTRSDFQPPRFEYLDQR 60

Query: 61 SGHELMHSRSVSKGAFGSSYAGQVSNNG 89
          SGHELMHSRSVSKGAFGSSYAGQVSNNG
Sbjct: 61 SGHELMHSRSVSKGAFGSSYAGQVSNNG 88

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: XP_038905929.1 (uncharacterized protein LOC120091851 [Benincasa hispida])

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-31
Identity = 78/100 (78.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL-TNDESSHRRTRSDFQPPRFEYLDQ 60
           MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL TNDESSHRRTRSDFQPP  E+ DQ
Sbjct: 1   MEGLIPYLFHAMKKQKPRHNYRSQSVGSSRSYHLLITNDESSHRRTRSDFQPPALEFSDQ 60

Query: 61  RSGHELMHSRSVSKGAFG-------------SSYAGQVSN 87
           RS HELMHSRSVSKGAFG             SSY GQV+N
Sbjct: 61  RSTHELMHSRSVSKGAFGSSTRPSYGFESGFSSYPGQVTN 100

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: KGN52765.1 (hypothetical protein Csa_015267 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 7.0e-29
Identity = 75/101 (74.26%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
           QRS  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of Carg19684 vs. NCBI nr
Match: KAA0044340.1 (putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa] >TYK29469.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-27
Identity = 75/102 (73.53%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  -QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
            QR   EL HSRSV+K AFGS             SYAGQVSN
Sbjct: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSN 102

[Close]

BLAST of Carg19684 vs. ExPASy Swiss-Prot
Match: Q04614 (NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12
Identity = 45/59 (76.27%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GILLNR +I IM MSIE MLLAVNSNFLVF V  DDMMGQ F  LV TV AAESAI
Sbjct: 17  GIWGILLNRRNILIMLMSIELMLLAVNSNFLVFSVSLDDMMGQVFALLVLTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. ExPASy Swiss-Prot
Match: P26851 (NADH-ubiquinone oxidoreductase chain 4L OS=Marchantia polymorpha OX=3197 GN=ND4L PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 42/59 (71.19%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GI LNR +I IM MSIE MLLAVN NFLVF V  DDMMGQ F   V TV AAESAI
Sbjct: 17  GIWGIFLNRKNILIMLMSIELMLLAVNLNFLVFSVYLDDMMGQLFALFVLTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. ExPASy Swiss-Prot
Match: Q37627 (NADH-ubiquinone oxidoreductase chain 4L OS=Prototheca wickerhamii OX=3111 GN=ND4L PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 38/59 (64.41%), Postives = 43/59 (72.88%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           GI GI LNR +I +M MSIE MLLAVN NFL+F V  DD +GQ F  L+ TV AAESAI
Sbjct: 17  GIWGIFLNRKNIIVMLMSIELMLLAVNLNFLLFSVYIDDCIGQLFALLILTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. ExPASy Swiss-Prot
Match: Q37598 (NADH-ubiquinone oxidoreductase chain 4L OS=Phytophthora infestans OX=4787 GN=ND4L PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.1e-08
Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 88  GIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           G+ GI+LNR +I I+ MSIE +LL++N NF+ F V  DD++GQ F  L+ TV AAESAI
Sbjct: 17  GLFGIILNRQNIIIILMSIELLLLSINLNFIYFAVLIDDIIGQVFSLLILTVAAAESAI 75

[Close]

BLAST of Carg19684 vs. ExPASy Swiss-Prot
Match: B8GNZ5 (NADH-quinone oxidoreductase subunit K OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=nuoK PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 0


Query: 89  IRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAESAI 147
           I GI LNR ++ I+ MSIE MLLAVN NF+ F   S D+ GQ F+  + TV AAE+AI
Sbjct: 19  IAGIFLNRKNVIILLMSIELMLLAVNMNFVAFSHFSGDLAGQVFVFFILTVAAAEAAI 76

[Close]

BLAST of Carg19684 vs. ExPASy TrEMBL
Match: A0A0A0KT06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 75/101 (74.26%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
           QRS  EL HSRSV+K AFGS             SY GQVSN
Sbjct: 61  QRSTRELTHSRSVNKVAFGSSTRPSNGFESNFYSYTGQVSN 101

[Close]

BLAST of Carg19684 vs. ExPASy TrEMBL
Match: A0A5A7TM95 (Putative beta-D-xylosidase 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00650 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 6.4e-28
Identity = 75/102 (73.53%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--TNDESSHRRTRSDFQPPRFEYLD 60
           MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL   NDESSHRRTRSD+QPP FE+LD
Sbjct: 1   MEGLIPYLFHAMKKQKPRHSYRSQSVGSSRSYHLLITANDESSHRRTRSDYQPPTFEFLD 60

Query: 61  -QRSGHELMHSRSVSKGAFGS-------------SYAGQVSN 87
            QR   EL HSRSV+K AFGS             SYAGQVSN
Sbjct: 61  QQRPSQELTHSRSVNKVAFGSSTRPSNGFESNFYSYAGQVSN 102

[Close]

BLAST of Carg19684 vs. ExPASy TrEMBL
Match: A0A5N6QPG1 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004630 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.9e-17
Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
          MEGLIPYL HA+KKQKP+H YRS S GS+RSYHLL N +    SSHRRTRSDFQPP  E+
Sbjct: 1  MEGLIPYLVHAIKKQKPQHSYRSFSEGSTRSYHLLLNSDSLSGSSHRRTRSDFQPPNMEF 60

Query: 61 LDQRSG-HELMHSRSVSK------GAFGSSYAGQVSNN 88
          ++QRSG  +L+ S S +K       +  +SY+ ++ NN
Sbjct: 61 VEQRSGVEQLVRSYSTNKTSTPTSSSKMASYSTRLPNN 98

[Close]

BLAST of Carg19684 vs. ExPASy TrEMBL
Match: B9SNE5 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 1   MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTNDE----SSHRRTRSDFQPPRFEY 60
           MEGLIPYL HA++KQKP++ YRS SVGSSRSYHLLT  +    SSHRRTRS+FQPP  E 
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGADSFSGSSHRRTRSEFQPPTMEL 60

Query: 61  LDQRSGHELMHSRSV--------SKGAFGS-----SYAGQVSNNGIR 91
           LDQR G E + S S+         K A GS     SY  Q+S + ++
Sbjct: 61  LDQRQGLEYLRSGSLRNHRQVTSPKAASGSKLGTTSYPQQMSGDHVK 107

[Close]

BLAST of Carg19684 vs. ExPASy TrEMBL
Match: A0A5C7I5L1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_011123 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 51/79 (64.56%), Postives = 61/79 (77.22%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLTN----DESSHRRTRSDFQPP--RF 60
          MEGLIP+L HAMKKQ+P+H YRS SVGS+RSYHLL      D SSHRRTRSDFQPP    
Sbjct: 1  MEGLIPFLIHAMKKQRPQHSYRSFSVGSTRSYHLLNGGDAVDGSSHRRTRSDFQPPTSTA 60

Query: 61 EYLDQRSGHELMHSRSVSK 74
          ++L QRSG E + SR+V++
Sbjct: 61 QFLGQRSGIEFVRSRTVNR 79

[Close]

BLAST of Carg19684 vs. TAIR 10
Match: ATMG00650.1 (NADH dehydrogenase subunit 4L )

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18
Identity = 51/63 (80.95%), Postives = 53/63 (84.13%), Query Frame = 0


Query: 84  VSNNGIRGILLNRPSIPIMSMSIEPMLLAVNSNFLVFFVCSDDMMGQSFISLVPTVVAAE 143
           +S  GIRGILLNR +IPIMSM IE MLLAVNSNFLVF V SDDMMGQ F SLVPTV AAE
Sbjct: 13  ISILGIRGILLNRRNIPIMSMPIESMLLAVNSNFLVFSVSSDDMMGQVFASLVPTVAAAE 72

Query: 144 SAI 147
           SAI
Sbjct: 73  SAI 75

[Close]

BLAST of Carg19684 vs. TAIR 10
Match: AT3G19615.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 10 Blast hits to 10 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-10
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 1  MEGLIPYLFHAMKK-QKPRHD-YRSQSVGSSRSYHLLTNDE--------SSHRRTRSDFQ 60
          MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L   +        SSHRRTRSD+ 
Sbjct: 1  MEGLIPYLIHAIKKDHKPDHQRYRSISVGSSRSYRPLMMGQDGSSSMQGSSHRRTRSDYN 60

Query: 61 P-PRFEYLDQRS---GHELMHSRSVSK 74
          P    +  DQRS   G E ++  S S+
Sbjct: 61 PHVIMDKFDQRSSGFGQEFVNKDSSSQ 87

The following BLAST results are available for this feature:

BLAST of Carg19684 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014945.1	2.7e-73	100.00	NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG6576920.1	9.5e-42	100.00	hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038905929.1	3.4e-31	78.00	uncharacterized protein LOC120091851 [Benincasa hispida]	[more]
KGN52765.1	7.0e-29	74.26	hypothetical protein Csa_015267 [Cucumis sativus]	[more]
KAA0044340.1	1.3e-27	73.53	putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa] >TYK29469.1 p...	[more]

BLAST of Carg19684 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04614	3.6e-12	76.27	NADH-ubiquinone oxidoreductase chain 4L OS=Arabidopsis thaliana OX=3702 GN=ND4L ...	[more]
P26851	1.5e-10	71.19	NADH-ubiquinone oxidoreductase chain 4L OS=Marchantia polymorpha OX=3197 GN=ND4L...	[more]
Q37627	2.9e-09	64.41	NADH-ubiquinone oxidoreductase chain 4L OS=Prototheca wickerhamii OX=3111 GN=ND4...	[more]
Q37598	7.1e-08	55.93	NADH-ubiquinone oxidoreductase chain 4L OS=Phytophthora infestans OX=4787 GN=ND4...	[more]
B8GNZ5	4.6e-07	55.17	NADH-quinone oxidoreductase subunit K OS=Thioalkalivibrio sulfidiphilus (strain ...	[more]

BLAST of Carg19684 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT06	3.4e-29	74.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000840 PE=4 SV=1	[more]
A0A5A7TM95	6.4e-28	73.53	Putative beta-D-xylosidase 5 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5N6QPG1	3.9e-17	56.12	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_004630 PE=4 SV=1	[more]
B9SNE5	1.1e-16	54.21	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0175590 PE=4 SV=1	[more]
A0A5C7I5L1	1.1e-16	64.56	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_011123 PE=4 SV=1	[more]

BLAST of Carg19684 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00650.1	2.7e-18	80.95	NADH dehydrogenase subunit 4L	[more]
AT3G19615.1	7.8e-10	51.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.3510		coord: 85..146 e-value: 4.1E-10 score: 41.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..49
None	No IPR available	PANTHER	PTHR38370	BETA-1,4-XYLOSIDASE	coord: 1..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19684-RA	Carg19684-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0015078	proton transmembrane transporter activity