Carg19672 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg19672
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr16: 1857201 .. 1858480 (-)
RNA-Seq ExpressionCarg19672
SyntenyCarg19672
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGTACTACACAAGTTTCTAAACTCGCTGCTTGGTTTCCTTGCGAAACGAATCGACGAACGAATTACTGAGGAATAGATGCCGTTGAATTGTGATTTATTTGATGCTCGATGTTCGTTCTTTTTGCCGTGTTGATCTCTGTTTACTATTGATTTCGGCTTTTGTAAATTTAGAATCATTTGGAGGTTGAATTTCTGTTGTTTATGTTTTTATCTTAATTTCAGATTAATTTTAATGCATTTTGAAGTTTTTGTTATCTGTGAAGTTATTTGTGATTGCGTTGTAAAAGAGTTGCATAAATCTTGTTAGCAATTATCCTTTACATTCCGACGCAACACTAGACTCGACCATTTTTCAGAATTATCACCGCAGGAAACAGCCTATCAAGTTTCTTATTATCTTAATTAAGGCCTTCTCAACTCTGCTGAGCTCAAAGGTTAATCACACGAACAGGAACCCCACCAATATTTCCAGAGTCTTCCCTATTCCATCTGATTTTTGAAAAATTCATCACATTATTACTTATGATCTTGTCTCTCTCTTGATCATCTTTGATTGGAAGGCTCTTTTCTGAGGTGCTTGATTGCAAATTTCTTGATTTCTTTCGTGAGTTGGTGCCACAGTTTACTCGTTTTTGTTTCAAATTGTCGTTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGTACCTTCTGCCGTACTTGTCAGGATCGCTAGTATCCTTCTGTGAGTTTTGTTTATAGGAAACATGAAAAACATATTGGAATCGTTTCTTCGTAAAGTAATTATTTAGTGCGACCATCGCTATAATCATCACGAAGTCATAACTTGTCAGTGAATTTGTGTTTGGATCATATGATGTGGCATTACTAAGCAGTTATTTTTATACCATTAAAATGTGATTTGGTAAGAAGAAATTGGATTGGGATGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATTATTGGCAAGCCGGAGATCGTCACAACAGTTGTAGGTCCCTTTTCTGACATTTTTATTC

mRNA sequence

ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATTATTGGCAAGCCGGAGATCGTCACAACAGTTGTAGGTCCCTTTTCTGACATTTTTATTC

Coding sequence (CDS)

ATGGCTTGGCGCTCTTCTGGATCTCTATCTCGCGCGCTCATTTCCTCTGTTAGGTCTTCTTCTCTCCGATCGTCTCCTTCTCTTCCTCGGCTTCGCCTGCCACCTATCACCGCTCGACCTCGCCTTCAATCTCGTCGCCTTTCATTTTCGACTTCCAGGAATTTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCACAGCATCATGGGTGCTACCTGCCTGACATCACACCTCTGTGTTAGCGCGCGGGCTTTTTGCGAGCTTTCTCATGGAAGGAATGGAAAAGATGGGTGA

Protein sequence

MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
Homology
[Close]
BLAST of Carg19672 vs. NCBI nr
Match: KAG7014957.1 (hypothetical protein SDJN02_22588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.0 bits (484), Expect = 4.8e-45
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 99

[Close]
BLAST of Carg19672 vs. NCBI nr
Match: XP_022984256.1 (uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984257.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984259.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984260.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984261.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984262.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984263.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984264.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984265.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984266.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984267.1 uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVR SSLRSSPSLPRLRLPP+TARPRLQSRRL+FSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGC 60

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCV ARAFCELSHGRNGKDG
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVGARAFCELSHGRNGKDG 99

[Close]
BLAST of Carg19672 vs. NCBI nr
Match: XP_038883079.1 (uncharacterized protein LOC120074027 isoform X2 [Benincasa hispida])

HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSR+LISSVR+SSLRS+PSLPRLR PP+ ARPR QSRRLSFSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRSLISSVRASSLRSAPSLPRLRPPPLAARPRPQSRRLSFSTSRNLGELGC 60

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 99

[Close]
BLAST of Carg19672 vs. NCBI nr
Match: XP_023551740.1 (uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023551741.1 uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo] >XP_023551742.1 uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40
Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVRSSSLRSSPSLP LR P +TARPRLQSRRLSFSTSR LGELGC
Sbjct: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPWLRPPSLTARPRLQSRRLSFSTSRKLGELGC 60

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATC TSHLCVSARAFCELSHGRNGKDG
Sbjct: 61  TQSLLPMHSIMGATCPTSHLCVSARAFCELSHGRNGKDG 99

[Close]
BLAST of Carg19672 vs. NCBI nr
Match: XP_022922831.1 (uncharacterized protein LOC111430696 isoform X2 [Cucurbita moschata] >XP_022922832.1 uncharacterized protein LOC111430696 isoform X2 [Cucurbita moschata])

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40
Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPP+TARP     RLSFSTSRNLGELGC
Sbjct: 30  MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPLTARP-----RLSFSTSRNLGELGC 89

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 90  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 123

[Close]
BLAST of Carg19672 vs. ExPASy TrEMBL
Match: A0A6J1J1R9 (uncharacterized protein LOC111482625 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVR SSLRSSPSLPRLRLPP+TARPRLQSRRL+FSTSRNLGELGC
Sbjct: 1   MAWRSSGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGC 60

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCV ARAFCELSHGRNGKDG
Sbjct: 61  TQSLLPMHSIMGATCLTSHLCVGARAFCELSHGRNGKDG 99

[Close]
BLAST of Carg19672 vs. ExPASy TrEMBL
Match: A0A6J1E4F2 (uncharacterized protein LOC111430696 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430696 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.0e-40
Identity = 93/99 (93.94%), Postives = 94/99 (94.95%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
           MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPP+TARP     RLSFSTSRNLGELGC
Sbjct: 30  MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPLTARP-----RLSFSTSRNLGELGC 89

Query: 61  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 90  TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 123

[Close]
BLAST of Carg19672 vs. ExPASy TrEMBL
Match: A0A6J1J861 (uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
          MAWRSSGSLSRALISSVR SSLRSSPSLPRLRLPP+TARPRLQSRRL+FSTSRNLGELGC
Sbjct: 1  MAWRSSGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGC 60

Query: 61 TQSLLPMHSIMGATCLTSHLCVSARAFCELSHG 94
          TQSLLPMHSIMGATCLTSHLCV ARAFCELSHG
Sbjct: 61 TQSLLPMHSIMGATCLTSHLCVGARAFCELSHG 93

[Close]
BLAST of Carg19672 vs. ExPASy TrEMBL
Match: A0A6J1JA18 (uncharacterized protein LOC111482625 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482625 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39
Identity = 89/93 (95.70%), Postives = 91/93 (97.85%), Query Frame = 0 

Query: 1  MAWRSSGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGC 60
          MAWRSSGSLSRALISSVR SSLRSSPSLPRLRLPP+TARPRLQSRRL+FSTSRNLGELGC
Sbjct: 1  MAWRSSGSLSRALISSVRFSSLRSSPSLPRLRLPPLTARPRLQSRRLAFSTSRNLGELGC 60

Query: 61 TQSLLPMHSIMGATCLTSHLCVSARAFCELSHG 94
          TQSLLPMHSIMGATCLTSHLCV ARAFCELSHG
Sbjct: 61 TQSLLPMHSIMGATCLTSHLCVGARAFCELSHG 93

[Close]
BLAST of Carg19672 vs. ExPASy TrEMBL
Match: A0A6J1D6T0 (uncharacterized protein LOC111017781 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017781 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.2e-38
Identity = 86/94 (91.49%), Postives = 91/94 (96.81%), Query Frame = 0 

Query: 6   SGSLSRALISSVRSSSLRSSPSLPRLRLPPITARPRLQSRRLSFSTSRNLGELGCTQSLL 65
           SGSLSR+LIS+VR+SSLRS+PSLPRLR PP+ ARPRLQSRRLSFSTSRNLGELGCTQSLL
Sbjct: 5   SGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGCTQSLL 64

Query: 66  PMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           PMH IMGATCLTSHLCVSARAFCELSHGRNGKDG
Sbjct: 65  PMHGIMGATCLTSHLCVSARAFCELSHGRNGKDG 98

[Close]
BLAST of Carg19672 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALIS-SVRSSSLRS-SPSLPRLRLPPITARPRLQSRRLSFST-SRNLGE 60
           MAWR++GS +R+ +S + RS SLRS + +LPRLR PP ++ P   SRR +FS+ SRNLG 
Sbjct: 1   MAWRNAGSAARSFVSATARSPSLRSPTTALPRLR-PPQSSLP---SRRFTFSSPSRNLGA 60

Query: 61  LGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           LGCTQS LP++S++  + LTSHL V+ RAFCELS+G  GKDG
Sbjct: 61  LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG-IGKDG 97

[Close]
BLAST of Carg19672 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-18
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 0 

Query: 1   MAWRSSGSLSRALIS-SVRSSSLRS-SPSLPRLRLPPITARPRLQSRRLSFST-SRNLGE 60
           MAWR++GS +R+ +S + RS SLRS + +LPRLR PP ++ P   SRR +FS+ SRNLG 
Sbjct: 1   MAWRNAGSAARSFVSATARSPSLRSPTTALPRLR-PPQSSLP---SRRFTFSSPSRNLGA 60

Query: 61  LGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHGRNGKDG 100
           LGCTQS LP++S++  + LTSHL V+ RAFCELS+G  GKDG
Sbjct: 61  LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG-IGKDG 97

[Close]
BLAST of Carg19672 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 0 

Query: 1  MAWRSSGSLSRALIS-SVRSSSLRS-SPSLPRLRLPPITARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +R+ +S + RS SLRS + +LPRLR PP ++ P   SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLR-PPQSSLP---SRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHG 94
          LGCTQS LP++S++  + LTSHL V+ RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]
BLAST of Carg19672 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 0 

Query: 1  MAWRSSGSLSRALIS-SVRSSSLRS-SPSLPRLRLPPITARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +R+ +S + RS SLRS + +LPRLR PP ++ P   SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLR-PPQSSLP---SRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHG 94
          LGCTQS LP++S++  + LTSHL V+ RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]
BLAST of Carg19672 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-17
Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 0 

Query: 1  MAWRSSGSLSRALIS-SVRSSSLRS-SPSLPRLRLPPITARPRLQSRRLSFST-SRNLGE 60
          MAWR++GS +R+ +S + RS SLRS + +LPRLR PP ++ P   SRR +FS+ SRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLR-PPQSSLP---SRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPMHSIMGATCLTSHLCVSARAFCELSHG 94
          LGCTQS LP++S++  + LTSHL V+ RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:
BLAST of Carg19672 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7014957.14.8e-45100.00hypothetical protein SDJN02_22588, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022984256.12.6e-4395.96uncharacterized protein LOC111482625 isoform X2 [Cucurbita maxima] >XP_022984257... [more]
XP_038883079.11.4e-4192.93uncharacterized protein LOC120074027 isoform X2 [Benincasa hispida][more]
XP_023551740.11.2e-4093.94uncharacterized protein LOC111809622 isoform X3 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022922831.12.1e-4093.94uncharacterized protein LOC111430696 isoform X2 [Cucurbita moschata] >XP_0229228... [more]
BLAST of Carg19672 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg19672 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J1R91.3e-4395.96uncharacterized protein LOC111482625 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1E4F21.0e-4093.94uncharacterized protein LOC111430696 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J8611.4e-3995.70uncharacterized protein LOC111482625 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JA181.4e-3995.70uncharacterized protein LOC111482625 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1D6T01.2e-3891.49uncharacterized protein LOC111017781 isoform X2 OS=Momordica charantia OX=3673 G... [more]
BLAST of Carg19672 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G15000.21.4e-1857.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.31.4e-1857.84unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.11.2e-1757.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.41.2e-1757.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G15000.51.2e-1757.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..37
NoneNo IPR availablePANTHERPTHR33156:SF26OS12G0592200 PROTEINcoord: 1..94
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19672-RACarg19672-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane