Carg19638 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19638
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	COBRA-like protein 7
Location	Carg_Chr14: 11916014 .. 11916885 (+)
RNA-Seq Expression	Carg19638
Synteny	Carg19638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGCAATGTGACTGAAGAGAAGCGTAAGAAGGGTTTAGAGGACGTCACCCCAAATGAAGAAGCAAAACAACTTACTCTAATTGAACGAGCGAAACGACGAAAAGGGTATTTTTGTAATAATCGCAAAATCCTAATCAAAAGGTGGACTCCAATTTAGGGTTCTTAAATTGTTCAATTGAAAGATGATTATTATTTTTTTTTTGAAAAATAACCGAAAAGAACACAAGAAAAAGACTGTTTTCAACGGACAGTGGTCCCCACTAGTTCTTGCCTTTTGCCGAATTCCTTTTGAACAGCTCAGAAACCGCCATTATTTTCAAATCCACAGAACCCCAGAAGCCCAAAATCATGGCCGTCGCCGTCGCCGTCGCCATCGCCATCGCCGATCTGATCTTCTTAATCATCTTAACGACCATACCATTTTCGATTTCTCAGCCAACTGAGAAAGCTCCGCTTCCCGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAGCCAAGCTTCCTCCAAATCTCACAGTTCTGGCACGCCAGCCTTACCGATTCGAGTCCACTCTCTCGATTCTCAACAGCGGTCTTCAGGAGCTCAAGTCTTGGAAGGTTTTTGTAGGGTTTCAACACGATGAGTTCTTGGTTTCGGCCTCCGGCGCCGTCCTCGCCGATGGTAATTCTATCCCTGGTAACGTTGGTAATGGGACCGTCTTTGGTGGTTTTCCGATGAGCAACTTGAAGACGGCCATTGAAACTGCTGGGGATTTCACTCAGATGCAGGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGCTGCCCCTCCGAATAATCCGATGCCTTCCAATATCTCTTGCCAATGA

mRNA sequence

ATGGAAAGCAATGTGACTGAAGAGAAGCGTAAGAAGGGTTTAGAGGACGTCACCCCAAATGAAGAAGCAAAACAACTTACTCTAATTGAACGAGCGAAACGACGAAAAGGCTCAGAAACCGCCATTATTTTCAAATCCACAGAACCCCAGAAGCCCAAAATCATGGCCGTCGCCGTCGCCGTCGCCATCGCCATCGCCGATCTGATCTTCTTAATCATCTTAACGACCATACCATTTTCGATTTCTCAGCCAACTGAGAAAGCTCCGCTTCCCGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAGCCAAGCTTCCTCCAAATCTCACAGTTCTGGCACGCCAGCCTTACCGATTCGAGTCCACTCTCTCGATTCTCAACAGCGGTCTTCAGGAGCTCAAGTCTTGGAAGGTTTTTGTAGGGTTTCAACACGATGAGTTCTTGGTTTCGGCCTCCGGCGCCGTCCTCGCCGATGGTAATTCTATCCCTGGTAACGTTGGTAATGGGACCGTCTTTGGTGGTTTTCCGATGAGCAACTTGAAGACGGCCATTGAAACTGCTGGGGATTTCACTCAGATGCAGGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGCTGCCCCTCCGAATAATCCGATGCCTTCCAATATCTCTTGCCAATGA

Coding sequence (CDS)

ATGGAAAGCAATGTGACTGAAGAGAAGCGTAAGAAGGGTTTAGAGGACGTCACCCCAAATGAAGAAGCAAAACAACTTACTCTAATTGAACGAGCGAAACGACGAAAAGGCTCAGAAACCGCCATTATTTTCAAATCCACAGAACCCCAGAAGCCCAAAATCATGGCCGTCGCCGTCGCCGTCGCCATCGCCATCGCCGATCTGATCTTCTTAATCATCTTAACGACCATACCATTTTCGATTTCTCAGCCAACTGAGAAAGCTCCGCTTCCCGCCGCCGATTCTTGCAATGGCATCTTCTTGTCCTACAGTTTCAACCAAGGAGCCAAGCTTCCTCCAAATCTCACAGTTCTGGCACGCCAGCCTTACCGATTCGAGTCCACTCTCTCGATTCTCAACAGCGGTCTTCAGGAGCTCAAGTCTTGGAAGGTTTTTGTAGGGTTTCAACACGATGAGTTCTTGGTTTCGGCCTCCGGCGCCGTCCTCGCCGATGGTAATTCTATCCCTGGTAACGTTGGTAATGGGACCGTCTTTGGTGGTTTTCCGATGAGCAACTTGAAGACGGCCATTGAAACTGCTGGGGATTTCACTCAGATGCAGGTCCAAGTCAAGTTACTTGGGACCCAATTTGGGGCTGCCCCTCCGAATAATCCGATGCCTTCCAATATCTCTTGCCAATGA

Protein sequence

MESNVTEEKRKKGLEDVTPNEEAKQLTLIERAKRRKGSETAIIFKSTEPQKPKIMAVAVAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ

Homology

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BLAST of Carg19638 vs. NCBI nr
Match: KAG7018584.1 (COBRA-like protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 435.3 bits (1118), Expect = 3.3e-118
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MESNVTEEKRKKGLEDVTPNEEAKQLTLIERAKRRKGSETAIIFKSTEPQKPKIMAVAVA 60
           MESNVTEEKRKKGLEDVTPNEEAKQLTLIERAKRRKGSETAIIFKSTEPQKPKIMAVAVA
Sbjct: 1   MESNVTEEKRKKGLEDVTPNEEAKQLTLIERAKRRKGSETAIIFKSTEPQKPKIMAVAVA 60

Query: 61  VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 120
           VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR
Sbjct: 61  VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 120

Query: 121 QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG 180
           QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG
Sbjct: 121 QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG 180

Query: 181 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ 227
           FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ
Sbjct: 181 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ 226

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BLAST of Carg19638 vs. NCBI nr
Match: KAG6582189.1 (COBRA-like protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.4 bits (864), Expect = 9.4e-89
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 55  MAVAVAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPN 114
           MAVAVAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPN
Sbjct: 1   MAVAVAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPN 60

Query: 115 LTVLARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGN 174
           LTVLARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGN
Sbjct: 61  LTVLARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGN 120

Query: 175 GTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ 227
           GTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ
Sbjct: 121 GTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNISCQ 172

[Close]

BLAST of Carg19638 vs. NCBI nr
Match: XP_022955560.1 (COBRA-like protein 7 [Cucurbita moschata])

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-82
Identity = 160/166 (96.39%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 59  VAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVL 118
           +AVAIAI DLIFLIILTTIPFSISQPTEKAP P ADSCNGIFLSYSFNQGAKLPPNLTVL
Sbjct: 1   MAVAIAITDLIFLIILTTIPFSISQPTEKAPPPTADSCNGIFLSYSFNQGAKLPPNLTVL 60

Query: 119 ARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF 178
           ARQPYRFESTLSILN+GLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF
Sbjct: 61  ARQPYRFESTLSILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF 120

Query: 179 GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFG APPNNPMPSNIS
Sbjct: 121 GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNIS 166

[Close]

BLAST of Carg19638 vs. NCBI nr
Match: XP_023528058.1 (COBRA-like protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 2.5e-81
Identity = 156/164 (95.12%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 61  VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 120
           +A+A+ADLIFLIILTTIPFSISQPTEKAP PAADSCNGIFLSYSFNQGAKLPPNLTVLAR
Sbjct: 1   MAVAVADLIFLIILTTIPFSISQPTEKAPPPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 60

Query: 121 QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG 180
           QPYRFESTLSILN+GLQELKSWKV+VGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF G
Sbjct: 61  QPYRFESTLSILNNGLQELKSWKVYVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFAG 120

Query: 181 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           FPMSNLKTAIETAGDFTQMQVQVKLLGTQFG APPNNPMPSNIS
Sbjct: 121 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNIS 164

[Close]

BLAST of Carg19638 vs. NCBI nr
Match: XP_022979725.1 (COBRA-like protein 7 [Cucurbita maxima])

HSP 1 Score: 311.6 bits (797), Expect = 5.5e-81
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 61  VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 120
           +A+A+ADLIFLII TTIPFSISQPTEKAP PAADSCNGIFLSYSFNQGAKLPPNLTV+AR
Sbjct: 1   MAVAVADLIFLIIFTTIPFSISQPTEKAPPPAADSCNGIFLSYSFNQGAKLPPNLTVMAR 60

Query: 121 QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG 180
           QPYRFESTLSILN+GLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF G
Sbjct: 61  QPYRFESTLSILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFAG 120

Query: 181 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           FPMSNLKTAIETAGDFTQMQVQVKLLGTQFG APPNNPMPSNIS
Sbjct: 121 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNIS 164

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BLAST of Carg19638 vs. ExPASy Swiss-Prot
Match: Q8GZ17 (COBRA-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=COBL7 PE=2 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-45
Identity = 92/163 (56.44%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 68  LIFLIILTTIPFSISQ----PTEKAPLPAADS--CNGIFLSYSFNQGAKLPPNLTVLARQ 127
           L+  +++ +IP + SQ     T  +P P +DS  CNG+F+SY+  +G+K+PPN T  A Q
Sbjct: 12  LLLSLLIVSIPLTSSQSDANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPPNDT--ANQ 71

Query: 128 PYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGF 187
           PYRFES +++LN G  ELKSW+VFV F H E LVSAS AVL+DG+S+P +V NGTVF G+
Sbjct: 72  PYRFESVITVLNHGRDELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGY 131

Query: 188 PMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           P S+LK+AI+TAGD TQMQ +V+L+GTQFG APPN P+P NI+
Sbjct: 132 PSSDLKSAIQTAGDVTQMQARVELVGTQFGVAPPNVPLPKNIT 172

[Close]

BLAST of Carg19638 vs. ExPASy Swiss-Prot
Match: Q9FJ13 (COBRA-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=COBL9 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.6e-45
Identity = 92/162 (56.79%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 71  LIILTTIPFSISQ--PTEKAPLPA------ADSCNGIFLSYSFNQGAKLPPNLTVLARQP 130
           L++ T  P S+SQ  PT   P PA      +D CNGIFLSY F  G K+PPN T  A QP
Sbjct: 12  LLLFTVTPPSMSQLPPTIMVPAPAPAPISPSDLCNGIFLSYDFILGRKIPPNDT--ADQP 71

Query: 131 YRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFP 190
           YRFES L++LN+G +ELK W+VFVGFQH+E L+SA+ A++ +G  +P  VGNGT+FGG+P
Sbjct: 72  YRFESVLTVLNNGREELKEWRVFVGFQHNEILISATDALIVNGTELPALVGNGTIFGGYP 131

Query: 191 MSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           +S+LKTAI+TAGD  QM  +++L+GTQF  APP  P+PSNIS
Sbjct: 132 VSDLKTAIQTAGDLKQMTAEIELVGTQFMVAPPAVPLPSNIS 171

[Close]

BLAST of Carg19638 vs. ExPASy Swiss-Prot
Match: Q9LIB6 (COBRA-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=COBL8 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-40
Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 0


Query: 63  IAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQP 122
           I ++ L   I LT+   +   P  K     AD CNG+F+SY++  G K+ PN T    QP
Sbjct: 11  ILLSSLFTAIQLTSSQRNTPPPRSK----DADLCNGVFVSYTYLTGTKIKPNDT--KNQP 70

Query: 123 YRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFP 182
           YRFES +++LN+G  ELKSW+VFV F H E LVSA+ AVL+DG+S+P +V NGT+F GFP
Sbjct: 71  YRFESEITVLNNGRDELKSWQVFVKFAHREILVSATNAVLSDGSSLPASVENGTIFAGFP 130

Query: 183 MSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
            ++LKTAI TAGD TQM+ +V+L+GTQFG APP+ P+P NI+
Sbjct: 131 SADLKTAIMTAGDVTQMEARVELVGTQFGVAPPSVPLPKNIT 166

[Close]

BLAST of Carg19638 vs. ExPASy Swiss-Prot
Match: Q9LJU0 (COBRA-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=COBL10 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.3e-28
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 89  PLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNSGLQELKSWKVFVGF 148
           P P    CNGIF+SY+F    +  P++  +  Q + F+ST  I+N+G +ELK W++F+GF
Sbjct: 51  PPPEMAHCNGIFMSYNFGSREREYPHVKNVTAQSWAFKSTAMIVNAGREELKGWQMFIGF 110

Query: 149 QHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGT 208
           +H E +VSA+GA   DG+  P +  NGT F G P  +LKT+IETAGDFTQ+   +++ GT
Sbjct: 111 RHKELIVSATGATPMDGD-YPLDASNGTTFVGSPNMDLKTSIETAGDFTQISANIEITGT 170

Query: 209 QFGAAPPNNPMPSNI 224
            FG +    PMP  I
Sbjct: 171 LFGVSKAVTPMPRTI 184

[Close]

BLAST of Carg19638 vs. ExPASy Swiss-Prot
Match: Q9T045 (COBRA-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=COBL11 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 6.2e-27
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 86  EKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNSGLQELKSWKVF 145
           +  P P    CNG+++SYS     KL P  T    Q + F+ST  I+N+G++E+K W++F
Sbjct: 38  DDTPPPGLARCNGVYMSYSSGGREKLYPRTTNATAQAWSFKSTAMIVNTGIEEVKGWQMF 97

Query: 146 VGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLKTAIETAGDFTQMQVQVKL 205
           VGF H E +VSA+GAV +DG+  P +  NGT F G   ++LKT+I TAGD+TQ+   +++
Sbjct: 98  VGFHHREIIVSATGAVSSDGD-FPVDATNGTTFIGSQNTDLKTSILTAGDYTQISTNIEI 157

Query: 206 LGTQFGAAPPNNPMPSNI 224
            GT FG      PMP +I
Sbjct: 158 TGTVFGGKGTATPMPKSI 174

[Close]

BLAST of Carg19638 vs. ExPASy TrEMBL
Match: A0A6J1GVF1 (COBRA-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111457540 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 8.3e-83
Identity = 160/166 (96.39%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 59  VAVAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVL 118
           +AVAIAI DLIFLIILTTIPFSISQPTEKAP P ADSCNGIFLSYSFNQGAKLPPNLTVL
Sbjct: 1   MAVAIAITDLIFLIILTTIPFSISQPTEKAPPPTADSCNGIFLSYSFNQGAKLPPNLTVL 60

Query: 119 ARQPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF 178
           ARQPYRFESTLSILN+GLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF
Sbjct: 61  ARQPYRFESTLSILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF 120

Query: 179 GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFG APPNNPMPSNIS
Sbjct: 121 GGFPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNIS 166

[Close]

BLAST of Carg19638 vs. ExPASy TrEMBL
Match: A0A6J1IU56 (COBRA-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111479351 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.7e-81
Identity = 155/164 (94.51%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 61  VAIAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLAR 120
           +A+A+ADLIFLII TTIPFSISQPTEKAP PAADSCNGIFLSYSFNQGAKLPPNLTV+AR
Sbjct: 1   MAVAVADLIFLIIFTTIPFSISQPTEKAPPPAADSCNGIFLSYSFNQGAKLPPNLTVMAR 60

Query: 121 QPYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGG 180
           QPYRFESTLSILN+GLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVF G
Sbjct: 61  QPYRFESTLSILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFAG 120

Query: 181 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           FPMSNLKTAIETAGDFTQMQVQVKLLGTQFG APPNNPMPSNIS
Sbjct: 121 FPMSNLKTAIETAGDFTQMQVQVKLLGTQFGVAPPNNPMPSNIS 164

[Close]

BLAST of Carg19638 vs. ExPASy TrEMBL
Match: A0A6J1I3Z0 (COBRA-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111470764 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.6e-70
Identity = 133/161 (82.61%), Postives = 147/161 (91.30%), Query Frame = 0


Query: 64  AIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPY 123
           A ADL+ L+I T IPFSI QPT++AP P+ADSCN IFLSYSFNQG KLPPN+T   RQPY
Sbjct: 9   ATADLLLLLIFTVIPFSICQPTDQAPPPSADSCNSIFLSYSFNQGTKLPPNVTDRTRQPY 68

Query: 124 RFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPM 183
           RFESTL ILN+GL+ELKSWKVFVGFQHDEFLVSASGAVLADGNS+PGNVGNGTVF GFPM
Sbjct: 69  RFESTLLILNNGLEELKSWKVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPM 128

Query: 184 SNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           ++LKTAIETAGDFTQMQVQVKL+GTQFG APPN+PMP+NIS
Sbjct: 129 TDLKTAIETAGDFTQMQVQVKLVGTQFGVAPPNSPMPTNIS 169

[Close]

BLAST of Carg19638 vs. ExPASy TrEMBL
Match: A0A6J1G0K3 (COBRA-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111449583 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.7e-70
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 64  AIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPY 123
           A  DL+ L+I T IPFSI QPT++AP P+ADSCN IFLSYSFNQG KLPPN+T   RQPY
Sbjct: 9   ATVDLLLLLIFTVIPFSICQPTDQAPPPSADSCNSIFLSYSFNQGTKLPPNVTDRTRQPY 68

Query: 124 RFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPM 183
           RFESTL ILN+GLQELKSWKVFVGFQHDEFLVSASGAVLADGNS+PGNVGNGTVF GFPM
Sbjct: 69  RFESTLLILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPM 128

Query: 184 SNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           ++LKTAIETAGDFTQMQVQVKL+GTQFG APPN+PMP+NIS
Sbjct: 129 TDLKTAIETAGDFTQMQVQVKLVGTQFGVAPPNSPMPTNIS 169

[Close]

BLAST of Carg19638 vs. ExPASy TrEMBL
Match: A0A0A0L5B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165620 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.9e-66
Identity = 128/157 (81.53%), Postives = 142/157 (90.45%), Query Frame = 0


Query: 68  LIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFES 127
           + FL   ++IPFSISQPT++AP PAA SCN IFLSYSF+QG KLPPN T LARQPYRFES
Sbjct: 7   IFFLFFTSSIPFSISQPTDQAPPPAAASCNHIFLSYSFDQGTKLPPNSTDLARQPYRFES 66

Query: 128 TLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLK 187
           TL++LN+GL ELKSWKVFVGFQHDEFLVSASGAVLADGNS PGNVGNGTVF GFPM++LK
Sbjct: 67  TLTVLNNGLTELKSWKVFVGFQHDEFLVSASGAVLADGNSFPGNVGNGTVFAGFPMTDLK 126

Query: 188 TAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           TAI+TAGD TQMQVQVKLLGTQFG APP++PMPSNIS
Sbjct: 127 TAIQTAGDITQMQVQVKLLGTQFGVAPPSSPMPSNIS 163

[Close]

BLAST of Carg19638 vs. TAIR 10
Match: AT4G16120.1 (COBRA-like protein-7 precursor )

HSP 1 Score: 183.0 bits (463), Expect = 2.8e-46
Identity = 92/163 (56.44%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 68  LIFLIILTTIPFSISQ----PTEKAPLPAADS--CNGIFLSYSFNQGAKLPPNLTVLARQ 127
           L+  +++ +IP + SQ     T  +P P +DS  CNG+F+SY+  +G+K+PPN T  A Q
Sbjct: 12  LLLSLLIVSIPLTSSQSDANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPPNDT--ANQ 71

Query: 128 PYRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGF 187
           PYRFES +++LN G  ELKSW+VFV F H E LVSAS AVL+DG+S+P +V NGTVF G+
Sbjct: 72  PYRFESVITVLNHGRDELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGY 131

Query: 188 PMSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           P S+LK+AI+TAGD TQMQ +V+L+GTQFG APPN P+P NI+
Sbjct: 132 PSSDLKSAIQTAGDVTQMQARVELVGTQFGVAPPNVPLPKNIT 172

[Close]

BLAST of Carg19638 vs. TAIR 10
Match: AT5G49270.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-46
Identity = 92/162 (56.79%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 71  LIILTTIPFSISQ--PTEKAPLPA------ADSCNGIFLSYSFNQGAKLPPNLTVLARQP 130
           L++ T  P S+SQ  PT   P PA      +D CNGIFLSY F  G K+PPN T  A QP
Sbjct: 12  LLLFTVTPPSMSQLPPTIMVPAPAPAPISPSDLCNGIFLSYDFILGRKIPPNDT--ADQP 71

Query: 131 YRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFP 190
           YRFES L++LN+G +ELK W+VFVGFQH+E L+SA+ A++ +G  +P  VGNGT+FGG+P
Sbjct: 72  YRFESVLTVLNNGREELKEWRVFVGFQHNEILISATDALIVNGTELPALVGNGTIFGGYP 131

Query: 191 MSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
           +S+LKTAI+TAGD  QM  +++L+GTQF  APP  P+PSNIS
Sbjct: 132 VSDLKTAIQTAGDLKQMTAEIELVGTQFMVAPPAVPLPSNIS 171

[Close]

BLAST of Carg19638 vs. TAIR 10
Match: AT3G16860.1 (COBRA-like protein 8 precursor )

HSP 1 Score: 166.8 bits (421), Expect = 2.0e-41
Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 0


Query: 63  IAIADLIFLIILTTIPFSISQPTEKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQP 122
           I ++ L   I LT+   +   P  K     AD CNG+F+SY++  G K+ PN T    QP
Sbjct: 11  ILLSSLFTAIQLTSSQRNTPPPRSK----DADLCNGVFVSYTYLTGTKIKPNDT--KNQP 70

Query: 123 YRFESTLSILNSGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFP 182
           YRFES +++LN+G  ELKSW+VFV F H E LVSA+ AVL+DG+S+P +V NGT+F GFP
Sbjct: 71  YRFESEITVLNNGRDELKSWQVFVKFAHREILVSATNAVLSDGSSLPASVENGTIFAGFP 130

Query: 183 MSNLKTAIETAGDFTQMQVQVKLLGTQFGAAPPNNPMPSNIS 225
            ++LKTAI TAGD TQM+ +V+L+GTQFG APP+ P+P NI+
Sbjct: 131 SADLKTAIMTAGDVTQMEARVELVGTQFGVAPPSVPLPKNIT 166

[Close]

BLAST of Carg19638 vs. TAIR 10
Match: AT3G20580.1 (COBRA-like protein 10 precursor )

HSP 1 Score: 125.6 bits (314), Expect = 5.2e-29
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 0


Query: 89  PLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNSGLQELKSWKVFVGF 148
           P P    CNGIF+SY+F    +  P++  +  Q + F+ST  I+N+G +ELK W++F+GF
Sbjct: 51  PPPEMAHCNGIFMSYNFGSREREYPHVKNVTAQSWAFKSTAMIVNAGREELKGWQMFIGF 110

Query: 149 QHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLKTAIETAGDFTQMQVQVKLLGT 208
           +H E +VSA+GA   DG+  P +  NGT F G P  +LKT+IETAGDFTQ+   +++ GT
Sbjct: 111 RHKELIVSATGATPMDGD-YPLDASNGTTFVGSPNMDLKTSIETAGDFTQISANIEITGT 170

Query: 209 QFGAAPPNNPMPSNI 224
            FG +    PMP  I
Sbjct: 171 LFGVSKAVTPMPRTI 184

[Close]

BLAST of Carg19638 vs. TAIR 10
Match: AT4G27110.1 (COBRA-like protein 11 precursor )

HSP 1 Score: 122.5 bits (306), Expect = 4.4e-28
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 0


Query: 86  EKAPLPAADSCNGIFLSYSFNQGAKLPPNLTVLARQPYRFESTLSILNSGLQELKSWKVF 145
           +  P P    CNG+++SYS     KL P  T    Q + F+ST  I+N+G++E+K W++F
Sbjct: 38  DDTPPPGLARCNGVYMSYSSGGREKLYPRTTNATAQAWSFKSTAMIVNTGIEEVKGWQMF 97

Query: 146 VGFQHDEFLVSASGAVLADGNSIPGNVGNGTVFGGFPMSNLKTAIETAGDFTQMQVQVKL 205
           VGF H E +VSA+GAV +DG+  P +  NGT F G   ++LKT+I TAGD+TQ+   +++
Sbjct: 98  VGFHHREIIVSATGAVSSDGD-FPVDATNGTTFIGSQNTDLKTSILTAGDYTQISTNIEI 157

Query: 206 LGTQFGAAPPNNPMPSNI 224
            GT FG      PMP +I
Sbjct: 158 TGTVFGGKGTATPMPKSI 174

The following BLAST results are available for this feature:

BLAST of Carg19638 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018584.1	3.3e-118	100.00	COBRA-like protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6582189.1	9.4e-89	100.00	COBRA-like protein 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022955560.1	1.7e-82	96.39	COBRA-like protein 7 [Cucurbita moschata]	[more]
XP_023528058.1	2.5e-81	95.12	COBRA-like protein 7 [Cucurbita pepo subsp. pepo]	[more]
XP_022979725.1	5.5e-81	94.51	COBRA-like protein 7 [Cucurbita maxima]	[more]

BLAST of Carg19638 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ17	3.9e-45	56.44	COBRA-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=COBL7 PE=2 SV=2	[more]
Q9FJ13	6.6e-45	56.79	COBRA-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=COBL9 PE=2 SV=1	[more]
Q9LIB6	2.9e-40	53.09	COBRA-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=COBL8 PE=2 SV=1	[more]
Q9LJU0	7.3e-28	45.19	COBRA-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=COBL10 PE=1 SV=1	[more]
Q9T045	6.2e-27	43.48	COBRA-like protein 11 OS=Arabidopsis thaliana OX=3702 GN=COBL11 PE=2 SV=2	[more]

BLAST of Carg19638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GVF1	8.3e-83	96.39	COBRA-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111457540 PE=3 SV=1	[more]
A0A6J1IU56	2.7e-81	94.51	COBRA-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111479351 PE=3 SV=1	[more]
A0A6J1I3Z0	3.6e-70	82.61	COBRA-like protein 7 OS=Cucurbita maxima OX=3661 GN=LOC111470764 PE=3 SV=1	[more]
A0A6J1G0K3	4.7e-70	82.61	COBRA-like protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111449583 PE=3 SV=1	[more]
A0A0A0L5B7	1.9e-66	81.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165620 PE=3 SV=1	[more]

BLAST of Carg19638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16120.1	2.8e-46	56.44	COBRA-like protein-7 precursor	[more]
AT5G49270.1	4.7e-46	56.79	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G16860.1	2.0e-41	53.09	COBRA-like protein 8 precursor	[more]
AT3G20580.1	5.2e-29	45.19	COBRA-like protein 10 precursor	[more]
AT4G27110.1	4.4e-28	43.48	COBRA-like protein 11 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31052	COBRA-LIKE PROTEIN 7	coord: 67..224
None	No IPR available	PANTHER	PTHR31052:SF26	SUBFAMILY NOT NAMED	coord: 67..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19638-RA	Carg19638-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane