Carg19477 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19477
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Acidic leucine-rich nuclear phosphoprotein 32 family member B
Location	Carg_Chr16: 9922158 .. 9923283 (-)
RNA-Seq Expression	Carg19477
Synteny	Carg19477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTCCGTCATCGATCAGACGCGTAACTCGATCCCAAACGCTTGCTGCTGCAAATTCCGTCAATGACAGTGAGCCTCGTTTCTACGTTCTTTGAAATCCCGTTCTTGAAGAAACTAAAAGATCGATTCAGTCGGGTTTAAATTGATGGGTTATGGTAAATTTAATCTTTGATTCTCTAATGTGAATGCGTTCTTTTGGTCGTGTTTTTAGGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATACGCAAGATTTGGTTGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCGGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCGCCGTCGCTGTCTCGAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGGAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGAAGAGGAAGAGGAAGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGATGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAG

mRNA sequence

ATGGAGACTCCGTCATCGATCAGACGCGTAACTCGATCCCAAACGCTTGCTGCTGCAAATTCCGTCAATGACAGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATACGCAAGATTTGGTTGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCGGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCGCCGTCGCTGTCTCGAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGGAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGAAGAGGAAGAGGAAGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGATGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAG

Coding sequence (CDS)

ATGGAGACTCCGTCATCGATCAGACGCGTAACTCGATCCCAAACGCTTGCTGCTGCAAATTCCGTCAATGACAGGACGGTTGAGGATTATGACAGCAATGGCTTATCGAAATCCCGGGAGCGGAGTCGAAATACGCAAGATTTGGTTGGGGCGAAAGGGCAAGATCGATCGGCGCTTATCGACATTACTAATGACTCCCCCATTGTCAGCTTGGCAGCGGGGAATTTGACGACACCGATATCGTCTGCGACGAAACAGAGGAGTTTTCGGCCGAAGATGATGACTCCCGGATCAGGGGAAGCCTTATTGAGAGGGCAAGTGAAAACCCTTTTGCAGAAAGTGGAAGAAGAAGCTGAAATTTCTAAGCTTTCTTTAGATAGCTGGCCGGCGGGACTTCTCGACCCGATTCCGGCAAACACGCTGCAGATCTTGAATACGTCTCGGGATGGAAATCTTTTCGATATCACAAACGATGATCCCGTTGATGTTGATCTGTTTAACGCAAAGAAACAAGAAGAGAATCAGATTACTCGGTCTCTATTGTTGGATTTCGCTGAGAAATCCGAGATAATCGATGAAGATACGTCATCGGATTGCTCATCTGTTCTCGCCCGTCAAGAGAAGTTGTCGTCGTTATCGCCGTCGCTGTCTCGAGATGACGACGTCTCTTCTCTGTGGTCGATTCAAGCGAACGGAAGCAGCCACGGCAAAGACGTGGATGAAGAAGAGTTGATCGAACACGAGGAAGAGGAAGAGGAAGTAGACGAGCTATGTTGGGGACTTAGTAAAATTAGTGTGAACGAGAAGGGGAAAGCAAAGAATTTTACAGGGAAGCACACGAGGTTCGTGTACGATAGTGAAGATGAACTGATTGAGGAAGTTAGTGATGAGAGCCATGACGAGGTGTCACCGAGCGTCCTCCGTTTGAAGGGAGTACCGACGCCCAAAGGAAAACATTTACGATTCCAATCCGAGAGCGAATAG

Protein sequence

METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEISKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVDEEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLRLKGVPTPKGKHLRFQSESE

Homology

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BLAST of Carg19477 vs. NCBI nr
Match: KAG7015814.1 (hypothetical protein SDJN02_23452, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 617.8 bits (1592), Expect = 5.2e-173
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240

Query: 241 EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD 300
           EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD
Sbjct: 241 EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD 300

Query: 301 EVSPSVLRLKGVPTPKGKHLRFQSESE 328
           EVSPSVLRLKGVPTPKGKHLRFQSESE
Sbjct: 301 EVSPSVLRLKGVPTPKGKHLRFQSESE 327

[Close]

BLAST of Carg19477 vs. NCBI nr
Match: XP_022923214.1 (uncharacterized protein LOC111430972 isoform X2 [Cucurbita moschata])

HSP 1 Score: 592.8 bits (1527), Expect = 1.8e-165
Identity = 317/332 (95.48%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRN+QDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNSQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAA NLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAVNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIP NTLQILNTSRDGNLFDITND+P+DVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPTNTLQILNTSRDGNLFDITNDNPIDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DDDVSSLWSIQAN SSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVD 240

Query: 241 EEELIEHEEEEEE-----VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS 300
           EEELIEHEEEEE+     VDELCWGLS ISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS
Sbjct: 241 EEELIEHEEEEEDNEDGLVDELCWGLSIISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS 300

Query: 301 DESHDEVSPSVLRLKGVPTPKGKHLRFQSESE 328
           DESHDEVSPSVL LKGVPTPKGKHLRFQSESE
Sbjct: 301 DESHDEVSPSVLHLKGVPTPKGKHLRFQSESE 332

[Close]

BLAST of Carg19477 vs. NCBI nr
Match: KAG6577774.1 (Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 585.1 bits (1507), Expect = 3.7e-163
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240

Query: 241 EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD 300
           EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD
Sbjct: 241 EEELIEHEEEEEEVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHD 300

Query: 301 EVSPSVLRLKG 312
           EVSPSVLRLKG
Sbjct: 301 EVSPSVLRLKG 311

[Close]

BLAST of Carg19477 vs. NCBI nr
Match: XP_023551802.1 (uncharacterized protein LOC111809658 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.9 bits (1478), Expect = 8.6e-160
Identity = 317/382 (82.98%), Postives = 321/382 (84.03%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRN QDL GAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNLQDLAGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIPAN LQIL+TSRDGNLFDITNDDPVDVDLF AKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPANMLQILDTSRDGNLFDITNDDPVDVDLFKAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DDDVSSLWSIQAN SSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVD 240

Query: 241 EEELIEHEEEEEE----------------------------------------------- 300
           EEELIEHE+E+EE                                               
Sbjct: 241 EEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEE 300

Query: 301 --------VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 328
                   VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS
Sbjct: 301 EEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 360

[Close]

BLAST of Carg19477 vs. NCBI nr
Match: XP_022923213.1 (uncharacterized protein LOC111430972 isoform X1 [Cucurbita moschata])

HSP 1 Score: 572.4 bits (1474), Expect = 2.5e-159
Identity = 316/382 (82.72%), Postives = 322/382 (84.29%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRN+QDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNSQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAA NLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAVNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIP NTLQILNTSRDGNLFDITND+P+DVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPTNTLQILNTSRDGNLFDITNDNPIDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DDDVSSLWSIQAN SSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVD 240

Query: 241 EEELIEHEEEEEE----------------------------------------------- 300
           EEELIEHE+E+EE                                               
Sbjct: 241 EEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEE 300

Query: 301 --------VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 328
                   VDELCWGLS ISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS
Sbjct: 301 EEDNEDGLVDELCWGLSIISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 360

[Close]

BLAST of Carg19477 vs. ExPASy TrEMBL
Match: A0A6J1E5S0 (uncharacterized protein LOC111430972 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430972 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.7e-166
Identity = 317/332 (95.48%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRN+QDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNSQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAA NLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAVNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIP NTLQILNTSRDGNLFDITND+P+DVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPTNTLQILNTSRDGNLFDITNDNPIDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DDDVSSLWSIQAN SSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVD 240

Query: 241 EEELIEHEEEEEE-----VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS 300
           EEELIEHEEEEE+     VDELCWGLS ISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS
Sbjct: 241 EEELIEHEEEEEDNEDGLVDELCWGLSIISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS 300

Query: 301 DESHDEVSPSVLRLKGVPTPKGKHLRFQSESE 328
           DESHDEVSPSVL LKGVPTPKGKHLRFQSESE
Sbjct: 301 DESHDEVSPSVLHLKGVPTPKGKHLRFQSESE 332

[Close]

BLAST of Carg19477 vs. ExPASy TrEMBL
Match: A0A6J1E8X7 (uncharacterized protein LOC111430972 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430972 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 316/382 (82.72%), Postives = 322/382 (84.29%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRN+QDLVGAKGQDRSALI
Sbjct: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNSQDLVGAKGQDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAA NLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAVNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWPAGLLDPIP NTLQILNTSRDGNLFDITND+P+DVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPAGLLDPIPTNTLQILNTSRDGNLFDITNDNPIDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DDDVSSLWSIQAN SSHGKDVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDDVSSLWSIQANASSHGKDVD 240

Query: 241 EEELIEHEEEEEE----------------------------------------------- 300
           EEELIEHE+E+EE                                               
Sbjct: 241 EEELIEHEDEDEEEEEEVDKLKWGLRKISVNEKGKAENFVGKHVRFVYDSEEELIEDEEE 300

Query: 301 --------VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 328
                   VDELCWGLS ISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS
Sbjct: 301 EEDNEDGLVDELCWGLSIISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPS 360

[Close]

BLAST of Carg19477 vs. ExPASy TrEMBL
Match: A0A6J1HK53 (uncharacterized protein LOC111465247 OS=Cucurbita maxima OX=3661 GN=LOC111465247 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 1.3e-158
Identity = 304/332 (91.57%), Postives = 317/332 (95.48%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSALI 60
           METPSSIRR+TRSQTLAA NSVN+RTVED D+NGL KS+ERSRN+QDL GAKG+DRSALI
Sbjct: 1   METPSSIRRLTRSQTLAATNSVNNRTVEDCDNNGLWKSQERSRNSQDLAGAKGKDRSALI 60

Query: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120
           DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI
Sbjct: 61  DITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAEI 120

Query: 121 SKLSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPVDVDLFNAKKQEENQITRSL 180
           SKLSLDSWP GLLDPIPANTLQILNTSRDG+LFDITND+PVDVDLFNAKKQEENQITRSL
Sbjct: 121 SKLSLDSWPVGLLDPIPANTLQILNTSRDGDLFDITNDNPVDVDLFNAKKQEENQITRSL 180

Query: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSRDDDVSSLWSIQANGSSHGKDVD 240
           LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLS+DD VSSLWSIQ N SSHG+DVD
Sbjct: 181 LLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSLSQDDGVSSLWSIQVNASSHGEDVD 240

Query: 241 EEELIEHEEEEEE-----VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVS 300
           +EELIE EEEEE+     VDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDE+IEEVS
Sbjct: 241 KEELIEPEEEEEDNEDGLVDELCWGLSKISVNEKGKAKNFTGKHTRFVYDSEDEVIEEVS 300

Query: 301 DESHDEVSPSVLRLKGVPTPKGKHLRFQSESE 328
           DESHDEVSPSVLRLKGVPTPKGKHLRFQ ESE
Sbjct: 301 DESHDEVSPSVLRLKGVPTPKGKHLRFQCESE 332

[Close]

BLAST of Carg19477 vs. ExPASy TrEMBL
Match: A0A0A0L4Y0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002810 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 5.7e-109
Identity = 250/371 (67.39%), Postives = 279/371 (75.20%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNTQDLVGAKGQ 60
           METPSSIRRVTRSQTL+AA S+N+      R VE+ D+NGLSKSR+R+R +QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAAQSINNSNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  DRSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKV 120
           DRSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQKV
Sbjct: 61  DRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQKV 120

Query: 121 EEEAEISKLSLDS-------WPAGLLDPIPANTLQILNTSRDGNLFDITNDD-------- 180
           EEEAEISKLSL+S        PAGLL P PANT QI N ++D N+  ITN          
Sbjct: 121 EEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLTQDENICSITNHPIVEEQTIS 180

Query: 181 --PVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKL---SSLS 240
              VDVDLFN K+QEENQI RSLLLDF+EKSE  D++ TSSDCSSVL    K    S+LS
Sbjct: 181 QVVVDVDLFNEKQQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHHGKFSISSTLS 240

Query: 241 PSLSRDDDVSSLWSIQANGSSHGKDVD------EEELIEHEEEEEE---------VDELC 300
            S S+DDD  SLWSIQ N SSHG++ D      EEE+IE EE+EE          VDELC
Sbjct: 241 LSPSQDDDNFSLWSIQVNASSHGEEEDDEDIEEEEEVIEDEEDEEGDDYINDGGLVDELC 300

Query: 301 WGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESH--DEVSPSVLRLKGVPTPK 328
            G+SKISVNEKG+A+ F GKHTRFVYDSEDE+IEEVSDES     VSPS+LRLKG+PTPK
Sbjct: 301 KGISKISVNEKGEAEEFVGKHTRFVYDSEDEMIEEVSDESRGGGGVSPSILRLKGMPTPK 360

[Close]

BLAST of Carg19477 vs. ExPASy TrEMBL
Match: A0A5A7UB54 (Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00720 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.8e-108
Identity = 251/374 (67.11%), Postives = 281/374 (75.13%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANSVND------RTVEDYDSNGLSKSRERSRNTQDLVGAKGQ 60
           METPSSIRRVTRSQTL+AANSVN+      R VE+ D+NGLSKSR+R+R +QDL G KGQ
Sbjct: 1   METPSSIRRVTRSQTLSAANSVNNNNVSIPRKVEECDNNGLSKSRQRNRKSQDLGGVKGQ 60

Query: 61  D-RSALIDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQK 120
           D RSALIDITNDSPIV LAAG+L TPISS TKQRS RPKMMTPGSGEALLRGQVKTLLQK
Sbjct: 61  DNRSALIDITNDSPIVGLAAGSLMTPISSVTKQRSCRPKMMTPGSGEALLRGQVKTLLQK 120

Query: 121 VEEEAEISKLSLDS-------WPAGLLDPIPANTLQILNTSRDGNLFDITNDD------- 180
           VEEEAEISKLSL+S        PAGLL P PANT QI N S+D NL  IT+         
Sbjct: 121 VEEEAEISKLSLESRPFVHLQSPAGLLAPTPANTPQI-NLSQDENLCSITSHPIVEEQTI 180

Query: 181 ---PVDVDLFNAKKQEENQITRSLLLDFAEKSEIIDED-TSSDCSSVLARQEKL---SSL 240
               VD+DLFN KKQEENQI RSLLLDF+EKSE  D++ TSSDCSSVL  Q+K    S+L
Sbjct: 181 SQVAVDIDLFNGKKQEENQINRSLLLDFSEKSETNDDEATSSDCSSVLTHQDKFSKSSTL 240

Query: 241 SPSLSRDDDVSSLWSIQANGSSHGKD--------VDEEELIEHEEEEEE-------VDEL 300
           S S S+DDD SSLWSIQ N SSH +D         +EE++IE EE+EE        VDEL
Sbjct: 241 SLSPSQDDDNSSLWSIQVNASSHDEDEEDEDIEEEEEEDVIEDEEDEEGADYDGGLVDEL 300

Query: 301 CWGLSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESH----DEVSPSVLRLKGVP 328
           C G+SKISVNEKG+A+ F GKHTRFVY+SEDE+IEEVSDES       VSPS+LRLKG+P
Sbjct: 301 CKGISKISVNEKGEAEEFVGKHTRFVYNSEDEMIEEVSDESRGGGGGGVSPSILRLKGMP 360

[Close]

BLAST of Carg19477 vs. TAIR 10
Match: AT5G66230.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-58
Identity = 170/365 (46.58%), Postives = 216/365 (59.18%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANS-VNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSAL 60
           METPSS RRVTRSQT  A N+ ++ +  +D+     SKS +R+       GAK  DRSAL
Sbjct: 1   METPSSTRRVTRSQTRCAINNLLSSKKADDWSDKCQSKSVQRN-------GAK--DRSAL 60

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
            DITNDSPIV LA   + TP S    +R+      TPGSGEALLRGQVKTLLQKVEEEA+
Sbjct: 61  FDITNDSPIVGLA---MQTPSSGVVGKRNMSRINNTPGSGEALLRGQVKTLLQKVEEEAD 120

Query: 121 ISKLSLDS--------WPAGLLDPIPANTLQILNTSRDGNLFDITN----------DDPV 180
           ++K+SL+S         P GLL P PANT Q+L  S +  +  IT+             V
Sbjct: 121 LTKISLESRPFIHLVTSPMGLLAPTPANTPQVLGFSDEVQVV-ITSPVVAGQFRAPSQVV 180

Query: 181 DVDLFNAKK-----QEENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSL 240
           + ++F+ K+     ++   ITRSLLLDF++KSE+ +   SSDCSSV+ +           
Sbjct: 181 ESNMFDEKEESLELEKSPSITRSLLLDFSDKSELWE---SSDCSSVVTQ----------- 240

Query: 241 SRDDDVSSLWSIQANGS--------------SHGKDVDEEELIEHEEEEEE--VDELCWG 300
           + +DD SS+WS+QAN S              S+G++ DEE   E EEEEE   VD LC G
Sbjct: 241 NPEDDNSSVWSMQANASAKDEEYDDEEEEAYSYGEEYDEEYYDEEEEEEEGGIVDGLCEG 300

Query: 301 LSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLRLKGVPTPKGKHL 326
           + K+SV       +F GKHTRFVYDSEDE I E  D+     SP VLRLKG PTP GKH+
Sbjct: 301 IRKMSVE-----TDFAGKHTRFVYDSEDEEIVEAKDQ-----SPGVLRLKGFPTPTGKHV 328

[Close]

BLAST of Carg19477 vs. TAIR 10
Match: AT5G66230.2 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-57
Identity = 168/365 (46.03%), Postives = 215/365 (58.90%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAANS-VNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSAL 60
           + TPSS RRVTRSQT  A N+ ++ +  +D+     SKS +R+       GAK  DRSAL
Sbjct: 217 VNTPSSTRRVTRSQTRCAINNLLSSKKADDWSDKCQSKSVQRN-------GAK--DRSAL 276

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
            DITNDSPIV LA   + TP S    +R+      TPGSGEALLRGQVKTLLQKVEEEA+
Sbjct: 277 FDITNDSPIVGLA---MQTPSSGVVGKRNMSRINNTPGSGEALLRGQVKTLLQKVEEEAD 336

Query: 121 ISKLSLDS--------WPAGLLDPIPANTLQILNTSRDGNLFDITN----------DDPV 180
           ++K+SL+S         P GLL P PANT Q+L  S +  +  IT+             V
Sbjct: 337 LTKISLESRPFIHLVTSPMGLLAPTPANTPQVLGFSDEVQVV-ITSPVVAGQFRAPSQVV 396

Query: 181 DVDLFNAKK-----QEENQITRSLLLDFAEKSEIIDEDTSSDCSSVLARQEKLSSLSPSL 240
           + ++F+ K+     ++   ITRSLLLDF++KSE+ +   SSDCSSV+ +           
Sbjct: 397 ESNMFDEKEESLELEKSPSITRSLLLDFSDKSELWE---SSDCSSVVTQ----------- 456

Query: 241 SRDDDVSSLWSIQANGS--------------SHGKDVDEEELIEHEEEEEE--VDELCWG 300
           + +DD SS+WS+QAN S              S+G++ DEE   E EEEEE   VD LC G
Sbjct: 457 NPEDDNSSVWSMQANASAKDEEYDDEEEEAYSYGEEYDEEYYDEEEEEEEGGIVDGLCEG 516

Query: 301 LSKISVNEKGKAKNFTGKHTRFVYDSEDELIEEVSDESHDEVSPSVLRLKGVPTPKGKHL 326
           + K+SV       +F GKHTRFVYDSEDE I E  D+     SP VLRLKG PTP GKH+
Sbjct: 517 IRKMSVE-----TDFAGKHTRFVYDSEDEEIVEAKDQ-----SPGVLRLKGFPTPTGKHV 544

[Close]

BLAST of Carg19477 vs. TAIR 10
Match: AT3G51230.1 (BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family protein (TAIR:AT5G66230.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 109.0 bits (271), Expect = 7.3e-24
Identity = 92/204 (45.10%), Postives = 110/204 (53.92%), Query Frame = 0


Query: 1   METPSSIRRVTRSQTLAAAN-SVNDRTVEDYDSNGLSKSRERSRNTQDLVGAKGQDRSAL 60
           METPSS +RVTRSQ ++A N S +D  V    SN    S    R        K +DRSAL
Sbjct: 1   METPSSAKRVTRSQAISAINDSDSDFKVPFSSSNKTEDSSIDQR--------KEEDRSAL 60

Query: 61  IDITNDSPIVSLAAGNLTTPISSATKQRSFRPKMMTPGSGEALLRGQVKTLLQKVEEEAE 120
           IDITNDSPIV L     T P     K++S R K +TPGSGEALLRGQVKTLL KVEE  E
Sbjct: 61  IDITNDSPIVGLTM--QTPPSGFMVKRKSSRIK-ITPGSGEALLRGQVKTLLHKVEEGTE 120

Query: 121 ISK-------LSLDSWPAGLLDPIPANTLQILNTSRDGNLFDITNDDPV------DVDLF 180
           +         + L + P  LL P PANT Q  N S D     I +  P+         + 
Sbjct: 121 LIHSIKTRPFIHLVTSPMRLLAPTPANTPQFPNFSDDDVKIKIAS--PIVAGNLRTSQIS 180

Query: 181 NAKKQEENQITRSLLLDFAEKSEI 191
             K+ +   ITRSLL DF +KS +
Sbjct: 181 EEKEDKSMSITRSLLFDFTDKSAL 191

The following BLAST results are available for this feature:

BLAST of Carg19477 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015814.1	5.2e-173	100.00	hypothetical protein SDJN02_23452, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022923214.1	1.8e-165	95.48	uncharacterized protein LOC111430972 isoform X2 [Cucurbita moschata]	[more]
KAG6577774.1	3.7e-163	100.00	Bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT, partial [Cu...	[more]
XP_023551802.1	8.6e-160	82.98	uncharacterized protein LOC111809658 [Cucurbita pepo subsp. pepo]	[more]
XP_022923213.1	2.5e-159	82.72	uncharacterized protein LOC111430972 isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg19477 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg19477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E5S0	8.7e-166	95.48	uncharacterized protein LOC111430972 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E8X7	1.2e-159	82.72	uncharacterized protein LOC111430972 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HK53	1.3e-158	91.57	uncharacterized protein LOC111465247 OS=Cucurbita maxima OX=3661 GN=LOC111465247...	[more]
A0A0A0L4Y0	5.7e-109	67.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002810 PE=4 SV=1	[more]
A0A5A7UB54	4.8e-108	67.11	Acidic leucine-rich nuclear phosphoprotein 32 family member B OS=Cucumis melo va...	[more]

BLAST of Carg19477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66230.1	1.6e-58	46.58	Chalcone-flavanone isomerase family protein	[more]
AT5G66230.2	1.7e-57	46.03	Chalcone-flavanone isomerase family protein	[more]
AT3G51230.1	7.3e-24	45.10	BEST Arabidopsis thaliana protein match is: Chalcone-flavanone isomerase family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 294..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR47512	EXPRESSED PROTEIN	coord: 1..326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19477-RA	Carg19477-RA	mRNA