Carg19470 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19470
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	26S proteasome non-ATPase regulatory subunit 4 homolog
Location	Carg_Chr16: 9947390 .. 9951772 (+)
RNA-Seq Expression	Carg19470
Synteny	Carg19470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTTTTCTCCACTTGGTTGAACGATCTAGGGTTCTTATGGATATGAAACTATTTTTTTTGTTTCTTTTGGGTAGGCGACGATGATCTGCATCGATAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGAGATTCCAAGCTCAAGCGGATGCCGTCAATCTCATTTGCGGAGCTAAAACCCAGGTGACGGATTGCTTTATTTTGTTCCATTATGTTTTCCTTGTCTGTGATGGAAAGAGAAGAAGGAATATGTCCCCTGGTTTTAGATTTTATGTCATGTTTCGTGTAATATAATTTCTTCTTCATTGCCTTTTGGGTTGGCTTTGTTCTATTGCGCTGCAGTTTGGGTTATTTGGGTGGGGATAATTTTGATTACGAACAACGCCATATTACCTACTTTATTAAAGTGAAATTTGTAAATTAGTTTCTTGGAATTATCTGGTAGTCTCGCCTTTTTCTTTCTTAACATATGATTCTGAAGTTTTGATGGAAGTGTTTCATCGTTTCAATTTCTTCTAACAGTCCAATCCGGAGAATACGGTAGGAGTTCTTACGATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACCAGTGATCTTGGCAAGATTCTAGCGTGCATGCATGGTTAGTTCATCTACTTGCCTTTTCTCTGAAGTTACCCCCCTTTCTTGCTATATAAATTTGAGGCTTCTTAAAATGTTATGAGAGGTTTATTGCATTTTCTGCACCTTATTAAGGGTTTTCTTTTAAACGTAGTAGTTGAAAATTTAGGTACTAAGATATTTTCATGTGATCGTTTCTGTATTTGGTTGTCATTTCTTCAGCATCTTAGTATCCCTAATATTAGAAAAATAGTGAAAATTTGGCGAATTTTTTAATCAGCCCTTTTGTTCTGTCACTTATTCTTGAGGGTGACATTCTATGTCTTATGACTGATGATGTTTTGGACACTTCAGAGTGCATTTTATTCGAGATTATTTCTCAACAGAAACAACATTTAATATATGTGTATATATATATATAAAAGATGACTGATTATGTAAATATTTTACGTGTAATTTCTGTAATAAACAACAAAATCTGATAGAGTTCTTGTTTTGACTATTCAAGGTGTTATAAATTAAAACATTGGTAATAATTTTTGTGGCAACTATAGAAGGTGTCTTAAGTTAGAGTATAGGGAATATTTTTTGGGATAATTCTGAAAGCTTAATGGTCTATTCTCACTCATTAGATGTATGAGATGTCATGCATGATAACTCTTACTTTGATCCCTATTGAAGTCGATGAGTTTATTTTTGTTAGTGCTGTTCGTTCATTTCTCCTTGTACTTCTGTCATTTGTTCTGAATATTGACATTTTAGACGACTTTTGATATCGATGTTTCTCTTTAAATGTTTTTCCCAAAGAAAAACATATATCCCCAAATATTCTTAGGGGTGAGTACTGTCCAGTTTCAAGATGGTACGTACAGCATTTTAGTCATTAGAAATTCCTGGGTCCTTACTCTCTAGATGCATTGGATTAGGTGTATAGTGAGTTCTACAATAAGCCCTAGTGAAGTGCTGCTGATCTTTTTTGCTAGTCTTCCCACTTCGCTTTCTCTACGGTACTTAACATCTTTCTTTTTTACACAATAGGTTTAGAGTTGGGTGGAGAGACAAACTTGGCTGCAGGGATTCAGGTGGCACAGTTGGCTCTGAAGCATCGTCAAAATAAGAAACAACAACAAAGAATTATTGTTTTTGCGGGAAGGTAGGCACTTCTTGTCATTCCTTTTATGCATTTTTATTGTGCCATTCCAGTTATTAATTGTTCTCAAGCCATCTACCTTATGTCATCTTAGTCCTGCCAATCATGACAAAAAGTTGTTGGAGACAATAGGAAAGAAATTAAAGAAGAACAATGTGGCACTTGATATTATTGATTTTGGTGAAGAAGACGATGGTAAGCCAGAGAAACTGGAAGCCCTTCTTTCGGCTGTAAATAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCCGGTCCAAATGCACTATCCGATGTACTTATTAGGTCAGTTTCACTCTCTCTCTATGTGGTTGGAGGATACTGATTCTTATTGCTTCCGTTTGTTTCATATTGTTTGACATAGTAAAAAAAAAAAAAAAATCTCTCTATATGTTTTCACAATGTCTCCTATGTCAGTACTCCAATCTTCACCGGTGATGGGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCATTACGTGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGACAGCTGCTAAGAAAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGAGGCACAACCATCTGGCTCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAAACTTCTGATGCTCAAAAGACAAGTGATCCAATGGTTGGTTTATCTTAAATTAAATAAGTTCAAATGCTGCTATAGACATAGAATGTCCATGACTTCAAATATTTCCTTCAACGCTCACTTCATTTCTCAGCTTGCTTTCTCCCACCCTTCTGGAGAGGGGGTGTGGGGGAATGTTACTACGTATCTTCTACTTTGTTCTTGGCGACATTTTTTCATTGCCTTAACAACTTTAATGAAAGTAGAAGTTTATGCGATGTTTTGATATTCAATCTGGATTTGGGATTTGGTTACAGGACGATGATAATGCTCTGCTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCATGACGTGCGGGATACAGAAATGTCAGATGCAGCTATAGATCCAGAGTTAGCTCTTGGTAAGGTTCTTTGTTTCAATTTAACCATTCTTGGTTTGTGATGGGTACTTTTCTTCCTTCATCTCATGGTTGGCTGTTTGTCTCTGGAGTAATTCAGATTTTAACTTTATGAATATTTCGAAGGCATATAATTACTGCTGTTGAATCAAGCTTTATGAAAGTTTCTATCTTAGGTTCAGAGAATACGCTGCACTAATTTGCTTGATTGGTTTGCATGAATACTGTACCTGCTAATCTTTGATAGACCTGAATCATTTGCAAGTTGTAACAGCTCAACCCCACCGCTAGCAGATATTATCCTCTTTGGGCTTTACTTTTAGGGCTTCCTTCAAGGTTTTTAAAACACGTTTGATAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCCCATCCGATGTGGGATCTCACAATCCACTCCCTTCGGGAATCAGCGTCCTTGCTGGCACACTGCCTCGTGTCCACCTCCTTCGGAGCTTAGCCTTCTCTCTGGCACATTGCCCGGTGTCTAGCTCTGATACCATTTGTGACAGCCCAAACCAACCACTAGTAGATATTGTCTTCTTCAGGCTTTCCCTTTCAAGCTTCCCTCAAGGTTTTTAAAACACATATGCTAGGGAGAGGTTTCCACACCCATATAATAAAATGCTTCGTTCTCCTCCCCAACTAACTTGGAATCTCAGTTGCAAGTGGTGTAGTAGTGTACAATAAAACAAAACAATATCTTCATGAAATTTGACTTCCATCAATATGGACATCATACAGGCCAGTTTGGAGAAAAGAAATAAATGAATACTGCACTTGAATTGAATGTGCATTCTAACTATCTTTTCCATCTTCGTCTATTGCTTGTTGGATGCAGCACTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTGTCGTCCATTCTTGCATCGGTACGAATTCTACAACCTGTAAATACTCCCCCACGGATCTAGAAAAAGGTGCCTCCAAATATCAGGTTTATGTTTAATTGACTCAAATGGAAAAAATGTTCTACAGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGTTAGTTGGTTAAAAATCCAAATGATCCATCAGTTAAAGATTGTAAAGTTAATTTTGAACGTTGTTTCAGGACAAGAAGAACGAAGAAAACCCGCCCAAGGAAGACGACGACAACAACAAATGATCCATCCATCTTCCGAAGTTGAATAATTCCGCTAGGTAATTCGTATTTCCCTCGTAAGAGAGTTGCATCGTGTTCATCTGCAGAAGTTAGTCACTCTTGTTTTTTGCTTTTGATTTGGCTGAAAACAAGAATATGCTTCACTCTGATGTCTAAAAAAGTCTGTGCTTATGATATCGTACTCTTAATCTTAAATCAACTCTTGTTTTCTTTCTCTT

mRNA sequence

CTCATTTTTCTCCACTTGGTTGAACGATCTAGGGTTCTTATGGATATGAAACTATTTTTTTTGTTTCTTTTGGGTAGGCGACGATGATCTGCATCGATAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGAGATTCCAAGCTCAAGCGGATGCCGTCAATCTCATTTGCGGAGCTAAAACCCAGTCCAATCCGGAGAATACGGTAGGAGTTCTTACGATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACCAGTGATCTTGGCAAGATTCTAGCGTGCATGCATGGTTTAGAGTTGGGTGGAGAGACAAACTTGGCTGCAGGGATTCAGGTGGCACAGTTGGCTCTGAAGCATCGTCAAAATAAGAAACAACAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCCAATCATGACAAAAAGTTGTTGGAGACAATAGGAAAGAAATTAAAGAAGAACAATGTGGCACTTGATATTATTGATTTTGGTGAAGAAGACGATGGTAAGCCAGAGAAACTGGAAGCCCTTCTTTCGGCTGTAAATAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCCGGTCCAAATGCACTATCCGATGTACTTATTAGTACTCCAATCTTCACCGGTGATGGGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCATTACGTGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGACAGCTGCTAAGAAAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGAGGCACAACCATCTGGCTCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAAACTTCTGATGCTCAAAAGACAAGTGATCCAATGGACGATGATAATGCTCTGCTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCATGACGTGCGGGATACAGAAATGTCAGATGCAGCTATAGATCCAGAGTTAGCTCTTGCACTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTGTCGTCCATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAACGAAGAAAACCCGCCCAAGGAAGACGACGACAACAACAAATGATCCATCCATCTTCCGAAGTTGAATAATTCCGCTAGGTAATTCGTATTTCCCTCGTAAGAGAGTTGCATCGTGTTCATCTGCAGAAGTTAGTCACTCTTGTTTTTTGCTTTTGATTTGGCTGAAAACAAGAATATGCTTCACTCTGATGTCTAAAAAAGTCTGTGCTTATGATATCGTACTCTTAATCTTAAATCAACTCTTGTTTTCTTTCTCTT

Coding sequence (CDS)

ATGATCTGCATCGATAATTCGGAATGGATGAGGAACGGCGATTATGCTCCTTCGAGATTCCAAGCTCAAGCGGATGCCGTCAATCTCATTTGCGGAGCTAAAACCCAGTCCAATCCGGAGAATACGGTAGGAGTTCTTACGATGGCCGGAAAAGGGGTTCGGGTTTTGGTAACTCCTACCAGTGATCTTGGCAAGATTCTAGCGTGCATGCATGGTTTAGAGTTGGGTGGAGAGACAAACTTGGCTGCAGGGATTCAGGTGGCACAGTTGGCTCTGAAGCATCGTCAAAATAAGAAACAACAACAAAGAATTATTGTTTTTGCGGGAAGTCCTGCCAATCATGACAAAAAGTTGTTGGAGACAATAGGAAAGAAATTAAAGAAGAACAATGTGGCACTTGATATTATTGATTTTGGTGAAGAAGACGATGGTAAGCCAGAGAAACTGGAAGCCCTTCTTTCGGCTGTAAATAGTAATGACTCCAGTCACATTGTTCACGTTCCCTCCGGTCCAAATGCACTATCCGATGTACTTATTAGTACTCCAATCTTCACCGGTGATGGGGAGGGAGGAAGTGGATTTGCAGCAGCTGCTGCTGCAGCTTCAGCTGGTGGGGCTGGTTTTGATTTTGGTGTGGATCCCAACCTAGACCCTGAACTAGCACTTGCATTACGTGTCTCAATGGAAGAGGAAAGGGCCAGACAGGAGACAGCTGCTAAGAAAGCTGCTGAGGAGACTTCAAAGCAGGAAAAAGGAGAGGCACAACCATCTGGCTCACAGGATACAACTATGAACGAACGTGCTAGTGCTGAAACTTCTGATGCTCAAAAGACAAGTGATCCAATGGACGATGATAATGCTCTGCTACAACAAGCCCTTGCAATGTCAATGGAAGATCCTGCCTCAAGTCATGACGTGCGGGATACAGAAATGTCAGATGCAGCTATAGATCCAGAGTTAGCTCTTGCACTTCAGTTGTCCGTGCAGGAGGATGCTAAAGACTCAACAAGCCAACCTGATATGAGTAAATTACTGGCAGACCAGTCATTCGTGTCGTCCATTCTTGCATCGCTTCCAGGGGTTGATCCAAATGATCCATCAGTTAAAGATTTACTGGCTTCCATGCAAAGTCAGTCAAAGCCAGAGGACAAGAAGAACGAAGAAAACCCGCCCAAGGAAGACGACGACAACAACAAATGA

Protein sequence

MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLETIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDPASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK

Homology

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BLAST of Carg19470 vs. NCBI nr
Match: KAG7015821.1 (26S proteasome non-ATPase regulatory subunit 4-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 738.8 bits (1906), Expect = 2.5e-209
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK
Sbjct: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 399

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BLAST of Carg19470 vs. NCBI nr
Match: KAG6577780.1 (26S proteasome non-ATPase regulatory subunit 4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 735.7 bits (1898), Expect = 2.1e-208
Identity = 398/399 (99.75%), Postives = 398/399 (99.75%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQ DMSKLLADQSFVSSILASLPG
Sbjct: 307 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQADMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 405

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BLAST of Carg19470 vs. NCBI nr
Match: XP_023553520.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 734.6 bits (1895), Expect = 4.7e-208
Identity = 397/399 (99.50%), Postives = 398/399 (99.75%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDD +K
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDKDK 405

[Close]

BLAST of Carg19470 vs. NCBI nr
Match: XP_022965261.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita maxima])

HSP 1 Score: 733.8 bits (1893), Expect = 7.9e-208
Identity = 396/397 (99.75%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDN 398
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD+N
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDNN 403

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BLAST of Carg19470 vs. NCBI nr
Match: XP_022923186.1 (26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita moschata])

HSP 1 Score: 732.6 bits (1890), Expect = 1.8e-207
Identity = 396/399 (99.25%), Postives = 397/399 (99.50%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASS DVRDTEMSDA IDPELALALQLSVQEDAKDSTSQPD+SKLLADQSFVSSILASLPG
Sbjct: 307 ASSQDVRDTEMSDATIDPELALALQLSVQEDAKDSTSQPDVSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 405

[Close]

BLAST of Carg19470 vs. ExPASy Swiss-Prot
Match: O82143 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 6.0e-142
Identity = 287/397 (72.29%), Postives = 330/397 (83.12%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDY+PSRFQAQADAVNLICGAKTQSNPENTVGV+TMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVMTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLE+G E NLAA IQVAQLALKHRQNK+QQQRII F GSP  +DKK+LE
Sbjct: 67  SDLGKILACMHGLEVGAEANLAAAIQVAQLALKHRQNKRQQQRIIAFIGSPVKYDKKVLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDI+DFGE DD KPEKLEAL+SAVNS+DSSHIVHVP G NALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIVDFGETDDDKPEKLEALISAVNSSDSSHIVHVPPGENALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASA-GGAGFDFGVDPNLDPELALALRVSMEEERARQETAA 240
           TPIFTG+ EGGSGFAA+AAAA+A G AGF+F VDPN+DPELALALR+SMEEERARQE  A
Sbjct: 187 TPIFTGE-EGGSGFAASAAAAAATGAAGFEFDVDPNVDPELALALRLSMEEERARQEAIA 246

Query: 241 KKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNA-LLQQALAMSME 300
           KKAAEE+S  E  +   S + D+ M E   A  +   K   P +DD+A LLQQALAMSME
Sbjct: 247 KKAAEESSGAENKDHASSSNADSVMAEAEPASNAADDKKDQPKEDDDAQLLQQALAMSME 306

Query: 301 DPASSHDVRDTEMSDAAI-DPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILAS 360
           + +S     D  M++AA+ D +LALALQ+SVQ+     +SQ DMSK+  D+SFV+SIL S
Sbjct: 307 EGSSGAAAADAAMAEAAVDDQDLALALQMSVQD--AGGSSQSDMSKVFEDRSFVTSILNS 366

Query: 361 LPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKED 395
           LPGVDPNDPSVKDLLAS+  Q + E K+++ + P+++
Sbjct: 367 LPGVDPNDPSVKDLLASLHGQGEQEKKEDKSDKPEDE 400

[Close]

BLAST of Carg19470 vs. ExPASy Swiss-Prot
Match: P55034 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN10 PE=1 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 6.5e-128
Identity = 264/402 (65.67%), Postives = 324/402 (80.60%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDY+PSR QAQ +AVNL+CGAKTQSNPENTVG+LTMAGKGVRVL TPT
Sbjct: 7   MICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP  ++KK LE
Sbjct: 67  SDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDD-GKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLI 180
            +GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NALSDVL+
Sbjct: 127 IVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLL 186

Query: 181 STPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAA 240
           STP+FTGD EG SG+ +AAAAA+A G  FDFGVDPN+DPELALALRVSMEEERARQE AA
Sbjct: 187 STPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERARQEAAA 246

Query: 241 KKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMED 300
           KKAA+E  +++K     S SQ+T       A T+D  K ++PMD+D+ALL QA+AMS   
Sbjct: 247 KKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAIAMS--- 306

Query: 301 PASSHDVRDTEMSDAA-IDPELALALQLSVQ-EDAKDSTSQPDMSKLLADQSFVSSILAS 360
                 V D  MS+AA  D +LALALQ+S+  E++ ++T     + LL +Q+F+SS+L+S
Sbjct: 307 ------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFISSVLSS 366

Query: 361 LPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           LPGVDPNDP+VK+LLAS+  +SK  ++  EE+  K+ +D  K
Sbjct: 367 LPGVDPNDPAVKELLASLPDESKRTEE--EESSSKKGEDEKK 386

[Close]

BLAST of Carg19470 vs. ExPASy Swiss-Prot
Match: P55035 (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster OX=7227 GN=Rpn10 PE=1 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 8.6e-64
Identity = 167/409 (40.83%), Postives = 244/409 (59.66%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MIC DNS++ RNGDY P+R   Q D +NL+C  K +SNPEN VG++T++   V VL T T
Sbjct: 7   MICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNT-VEVLATLT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SD G+I + MH ++  GE NL  GI++A L LKHRQ K  + RI+VF GSP NH++  L 
Sbjct: 67  SDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLV 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPNALSDVL 180
              K+LKK  V +DI+ FG+  +   E L A ++A+N  D   SH+V VP G + LSD L
Sbjct: 127 KQAKRLKKEKVNVDIVSFGDHGNNN-EILTAFINALNGKDGTGSHLVSVPRG-SVLSDAL 186

Query: 181 ISTPIFTG-DGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQET 240
           +S+PI  G DG GG+G          GG  F+FGVDPN DPELALALRVSMEE+R RQE+
Sbjct: 187 LSSPIIQGEDGMGGAGL---------GGNVFEFGVDPNEDPELALALRVSMEEQRQRQES 246

Query: 241 AAKKAAEETSKQEKGEAQPSG--SQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAM 300
             ++A  + +    G+A   G  S     NE ++   ++A       + + A+LQ+ALA+
Sbjct: 247 EQRRANPDGAPPTGGDAGGGGGVSGSGPGNEESAGAENEA-------NTEEAMLQRALAL 306

Query: 301 SMEDPASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQ----------------- 360
           S E P  +      + ++   + ++A A+Q+S+Q+   DS +Q                 
Sbjct: 307 STETPEDNL----PDFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVD 366

Query: 361 PDMSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQSQSKPEDKKNE 388
            D S+++ D +F+ S+L +LPGVDP   +V+D + S+   +K +DKK++
Sbjct: 367 EDYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSL---NKDKDKKSD 389

[Close]

BLAST of Carg19470 vs. ExPASy Swiss-Prot
Match: O35226 (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-63
Identity = 167/397 (42.07%), Postives = 243/397 (61.21%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           M+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     VL T T
Sbjct: 7   MVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCEVLTTLT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
            D G+IL+ +H ++  G+     GI+VA LALKHRQ K  + RII F GSP   ++K L 
Sbjct: 67  PDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLV 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPNALSDVL 180
            + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP +L+D L
Sbjct: 127 KLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADAL 186

Query: 181 ISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETA 240
           IS+PI  G+G          A    G + F+FGVDP+ DPELALALRVSMEE+R RQE  
Sbjct: 187 ISSPILAGEG---------GAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEE 246

Query: 241 AKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDP-MDDDNALLQQ---ALA 300
           A++AA   S  E G A P G++D+  ++     T + Q+   P + D +++ ++   A A
Sbjct: 247 ARRAA-AASAAEAGIATP-GTEDS--DDALLKMTINQQEFGRPGLPDLSSMTEEEQIAYA 306

Query: 301 MSMEDPASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSI 360
           M M        ++ TE S  + D + + A+      D  D   + D   ++ D  F+ S+
Sbjct: 307 MQM-------SLQGTEFSQESADMDASSAM------DTSDPVKEEDDYDVMQDPEFLQSV 366

Query: 361 LASLPGVDPNDPSVKDLLASMQSQSKPE---DKKNEE 389
           L +LPGVDPN+ +++ ++ ++ SQ+  +   DKK EE
Sbjct: 367 LENLPGVDPNNAAIRSVMGALASQATKDGKNDKKEEE 374

[Close]

BLAST of Carg19470 vs. ExPASy Swiss-Prot
Match: Q58DA0 (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.7e-62
Identity = 159/398 (39.95%), Postives = 235/398 (59.05%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           M+C+DNSE+MRNGD+ P+R QAQ DAVN++C +KT+SNPEN VG++T+A     VL T T
Sbjct: 7   MVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA-NDCEVLTTLT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
            D G+IL+ +H ++  G+     GI+VA LALKHRQ K  + RII F GSP   ++K L 
Sbjct: 67  PDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLV 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSND--SSHIVHVPSGPNALSDVL 180
            + K+LKK  V +DII+FGEE +   EKL A ++ +N  D   SH+V VP GP +L+D L
Sbjct: 127 KLAKRLKKEKVNVDIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGP-SLADAL 186

Query: 181 ISTPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETA 240
           IS+PI  G+G          A    G + F+FGVDP+ DPELALALRVSMEE+R RQE  
Sbjct: 187 ISSPILAGEG---------GAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEE 246

Query: 241 AKKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSME 300
           A++AA   S  E G A            + +    +  +T  P D  +   ++ +A +M+
Sbjct: 247 ARRAA-AASAAEAGIATAGTEDSDDALLKMTISQQEFGRTGLP-DLSSMTEEEQIAYAMQ 306

Query: 301 DPASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASL 360
                 +    E +D          +  S   D  + T + D   ++ D  F+ S+L +L
Sbjct: 307 MSLQGAEFGQAESAD----------MDASSAMDTSEPTKEEDDYDVMQDPEFLQSVLENL 366

Query: 361 PGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDD 397
           PGVDPN+ ++++ + S+ SQ+  + KK+++   K+++D
Sbjct: 367 PGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKKEED 380

[Close]

BLAST of Carg19470 vs. ExPASy TrEMBL
Match: A0A6J1HL78 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=3661 GN=LOC111465178 PE=3 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 3.8e-208
Identity = 396/397 (99.75%), Postives = 397/397 (100.00%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDN 398
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD+N
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDNN 403

[Close]

BLAST of Carg19470 vs. ExPASy TrEMBL
Match: A0A6J1E650 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430955 PE=3 SV=1)

HSP 1 Score: 732.6 bits (1890), Expect = 8.6e-208
Identity = 396/399 (99.25%), Postives = 397/399 (99.50%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE
Sbjct: 67  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
           TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP
Sbjct: 247 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASS DVRDTEMSDA IDPELALALQLSVQEDAKDSTSQPD+SKLLADQSFVSSILASLPG
Sbjct: 307 ASSQDVRDTEMSDATIDPELALALQLSVQEDAKDSTSQPDVSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 405

[Close]

BLAST of Carg19470 vs. ExPASy TrEMBL
Match: A0A5A7UCD1 (26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G00630 PE=3 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 6.1e-198
Identity = 378/395 (95.70%), Postives = 389/395 (98.48%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLE+GGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH+KKLLE
Sbjct: 67  SDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHEKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
            IGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 MIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE AAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           +AAEETSKQEKG  QPSGSQDTTMNERASAE+SDAQKT+DPM+D+NALLQQALAMSMEDP
Sbjct: 247 RAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASS D+RDTEMSDAA+DPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 396
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 400

[Close]

BLAST of Carg19470 vs. ExPASy TrEMBL
Match: A0A0A0L1M0 (VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 6.1e-198
Identity = 378/396 (95.45%), Postives = 389/396 (98.23%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLE+GGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH+KKLLE
Sbjct: 67  SDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHEKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
            IGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 MIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGG GFDFGVDPNLDPELALALRVSMEEERARQE AAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGGGFDFGVDPNLDPELALALRVSMEEERARQEAAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           +AA+ETSKQEKG  QPSGSQDTTMNERASAE+SDAQKTSDPM+D+NALLQQALAMSMEDP
Sbjct: 247 RAADETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTSDPMEDENALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASS D+RDTEMSDAA+DPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDD 397
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDD
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDD 401

[Close]

BLAST of Carg19470 vs. ExPASy TrEMBL
Match: A0A1S3BKI9 (26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 GN=LOC103490683 PE=3 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 6.1e-198
Identity = 378/395 (95.70%), Postives = 389/395 (98.48%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT
Sbjct: 7   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGLE+GGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANH+KKLLE
Sbjct: 67  SDLGKILACMHGLEIGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHEKKLLE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDDGKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 180
            IGKKLKKNNVALDIIDFGEEDD KPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS
Sbjct: 127 MIGKKLKKNNVALDIIDFGEEDDAKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLIS 186

Query: 181 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAAK 240
           TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQE AAK
Sbjct: 187 TPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQEAAAK 246

Query: 241 KAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMEDP 300
           +AAEETSKQEKG  QPSGSQDTTMNERASAE+SDAQKT+DPM+D+NALLQQALAMSMEDP
Sbjct: 247 RAAEETSKQEKGGEQPSGSQDTTMNERASAESSDAQKTNDPMEDENALLQQALAMSMEDP 306

Query: 301 ASSHDVRDTEMSDAAIDPELALALQLSVQEDAKDSTSQPDMSKLLADQSFVSSILASLPG 360
           ASS D+RDTEMSDAA+DPELALALQLSVQE++KDSTSQPDMSKLLADQSFVSSILASLPG
Sbjct: 307 ASS-DIRDTEMSDAAMDPELALALQLSVQEESKDSTSQPDMSKLLADQSFVSSILASLPG 366

Query: 361 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 396
           VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD
Sbjct: 367 VDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDD 400

[Close]

BLAST of Carg19470 vs. TAIR 10
Match: AT4G38630.1 (regulatory particle non-ATPase 10 )

HSP 1 Score: 458.8 bits (1179), Expect = 4.6e-129
Identity = 264/402 (65.67%), Postives = 324/402 (80.60%), Query Frame = 0


Query: 1   MICIDNSEWMRNGDYAPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPT 60
           MICIDNSEWMRNGDY+PSR QAQ +AVNL+CGAKTQSNPENTVG+LTMAGKGVRVL TPT
Sbjct: 7   MICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPT 66

Query: 61  SDLGKILACMHGLELGGETNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPANHDKKLLE 120
           SDLGKILACMHGL++GGE NL A IQ+AQLALKHRQNK Q+QRIIVFAGSP  ++KK LE
Sbjct: 67  SDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALE 126

Query: 121 TIGKKLKKNNVALDIIDFGEEDD-GKPEKLEALLSAVNSNDSSHIVHVPSGPNALSDVLI 180
            +GK+LKKN+V+LDI++FGE+DD  KP+KLEALL+AVN+ND SHIVHVPSG NALSDVL+
Sbjct: 127 IVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLL 186

Query: 181 STPIFTGDGEGGSGFAAAAAAASAGGAGFDFGVDPNLDPELALALRVSMEEERARQETAA 240
           STP+FTGD EG SG+ +AAAAA+A G  FDFGVDPN+DPELALALRVSMEEERARQE AA
Sbjct: 187 STPVFTGD-EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERARQEAAA 246

Query: 241 KKAAEETSKQEKGEAQPSGSQDTTMNERASAETSDAQKTSDPMDDDNALLQQALAMSMED 300
           KKAA+E  +++K     S SQ+T       A T+D  K ++PMD+D+ALL QA+AMS   
Sbjct: 247 KKAADEAGQKDKDGDTASASQETV------ARTTD--KNAEPMDEDSALLDQAIAMS--- 306

Query: 301 PASSHDVRDTEMSDAA-IDPELALALQLSVQ-EDAKDSTSQPDMSKLLADQSFVSSILAS 360
                 V D  MS+AA  D +LALALQ+S+  E++ ++T     + LL +Q+F+SS+L+S
Sbjct: 307 ------VGDVNMSEAADEDQDLALALQMSMSGEESSEATGAG--NNLLGNQAFISSVLSS 366

Query: 361 LPGVDPNDPSVKDLLASMQSQSKPEDKKNEENPPKEDDDNNK 400
           LPGVDPNDP+VK+LLAS+  +SK  ++  EE+  K+ +D  K
Sbjct: 367 LPGVDPNDPAVKELLASLPDESKRTEE--EESSSKKGEDEKK 386

The following BLAST results are available for this feature:

BLAST of Carg19470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015821.1	2.5e-209	100.00	26S proteasome non-ATPase regulatory subunit 4-like protein [Cucurbita argyrospe...	[more]
KAG6577780.1	2.1e-208	99.75	26S proteasome non-ATPase regulatory subunit 4-like protein, partial [Cucurbita ...	[more]
XP_023553520.1	4.7e-208	99.50	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita pepo subsp. pe...	[more]
XP_022965261.1	7.9e-208	99.75	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita maxima]	[more]
XP_022923186.1	1.8e-207	99.25	26S proteasome non-ATPase regulatory subunit 4 homolog [Cucurbita moschata]	[more]

BLAST of Carg19470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82143	6.0e-142	72.29	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Oryza sativa subsp. ja...	[more]
P55034	6.5e-128	65.67	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana O...	[more]
P55035	8.6e-64	40.83	26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster OX=722...	[more]
O35226	1.1e-63	42.07	26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus OX=10090 GN=Psmd4...	[more]
Q58DA0	4.7e-62	39.95	26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus OX=9913 GN=PSMD4 PE...	[more]

BLAST of Carg19470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HL78	3.8e-208	99.75	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita maxima OX=36...	[more]
A0A6J1E650	8.6e-208	99.25	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucurbita moschata OX=...	[more]
A0A5A7UCD1	6.1e-198	95.70	26S proteasome non-ATPase regulatory subunit 4-like protein OS=Cucumis melo var....	[more]
A0A0A0L1M0	6.1e-198	95.45	VWFA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002730 PE=3 S...	[more]
A0A1S3BKI9	6.1e-198	95.70	26S proteasome non-ATPase regulatory subunit 4 homolog OS=Cucumis melo OX=3656 G...	[more]

BLAST of Carg19470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38630.1	4.6e-129	65.67	regulatory particle non-ATPase 10	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 225..245
None	No IPR available	GENE3D	1.10.287.3990		coord: 213..302 e-value: 2.9E-18 score: 68.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 357..399
None	No IPR available	PANTHER	PTHR10223:SF6	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 HOMOLOG ISOFORM X1	coord: 1..396
None	No IPR available	PANTHER	PTHR10223	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4	coord: 1..396
None	No IPR available	CDD	cd01452	VWA_26S_proteasome_subunit	coord: 1..182 e-value: 8.52651E-105 score: 305.442
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 215..234 e-value: 11.0 score: 14.9 coord: 284..303 e-value: 0.56 score: 19.3 coord: 317..334 e-value: 51.0 score: 11.3
IPR003903	Ubiquitin interacting motif	PFAM	PF02809	UIM	coord: 217..230 e-value: 0.78 score: 9.8 coord: 317..330 e-value: 0.55 score: 10.3 coord: 284..299 e-value: 0.021 score: 14.7
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 284..303 score: 9.592854
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 215..234 score: 8.934976
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 1..169 e-value: 9.4E-14 score: 61.7
IPR002035	von Willebrand factor, type A	PFAM	PF13519	VWA_2	coord: 1..109 e-value: 5.3E-27 score: 94.6
IPR002035	von Willebrand factor, type A	PROSITE	PS50234	VWFA	coord: 1..183 score: 12.806387
IPR036465	von Willebrand factor A-like domain superfamily	GENE3D	3.40.50.410	von Willebrand factor, type A domain	coord: 1..180 e-value: 3.7E-78 score: 263.3
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 1..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19470-RA	Carg19470-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding