Carg19458 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg19458
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr16: 10033840 .. 10034395 (+)
RNA-Seq ExpressionCarg19458
SyntenyCarg19458
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTGCTGCCTTCGACCAATCGCTTTGTTCGTCTACTTATAAACAGACTTCTTCCAGTTTCGTTTTTATTCTCTTCATCGAATTGGATTTTAGGGTTCTTCTTTAGCTTTGCTTTGGAATTAAGAACAGCTTTACCATTGCTCCTTTTGGGGGTTGATGGATCTGTGGATCTAACAATTTCACTCGCACATGTATTGCTGTGTCTGTTTTGGATCTCCGTCGTTTTCATTTGATATCAACCAGTAGTAGCTCACCCCAACTGGCCAGAATAGCCTAATTTACAGTGTGAGTTCATACAAGTCTTCTATTATTGTTATTATTCTGTGGTTGAATTATTCACTGTTTCTTGTTCTTCAACTTCAATGGTGGTGGATTTTGTTCTGATTCTTGTTCCTGCTGTTCTTCCTTGTTCTTGATTCTATTTTCTGTTCAATGTTTGATTGTTGGGTCTGCAGGGGAGGGATTTGAGGTGGGATTGGTGTTGCATCCATTTCGGATGTGGAGGAATTGGAGGCTGGTTCTGGTGCAATGAGGGATGTTATCAAGCTTGA

mRNA sequence

ATGGCCATTGCTGCCTTCGACCAATCGCTTTGTTCGTCTACTTATAAACAGACTTCTTCCAGTTTCGTTTTTATTCTCTTCATCGAATTGGATTTTAGGGGGAGGGATTTGAGGTGGGATTGGTGTTGCATCCATTTCGGATGTGGAGGAATTGGAGGCTGGTTCTGGTGCAATGAGGGATGTTATCAAGCTTGA

Coding sequence (CDS)

ATGGCCATTGCTGCCTTCGACCAATCGCTTTGTTCGTCTACTTATAAACAGACTTCTTCCAGTTTCGTTTTTATTCTCTTCATCGAATTGGATTTTAGGGGGAGGGATTTGAGGTGGGATTGGTGTTGCATCCATTTCGGATGTGGAGGAATTGGAGGCTGGTTCTGGTGCAATGAGGGATGTTATCAAGCTTGA

Protein sequence

MAIAAFDQSLCSSTYKQTSSSFVFILFIELDFRGRDLRWDWCCIHFGCGGIGGWFWCNEGCYQA
Homology
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BLAST of Carg19458 vs. NCBI nr
Match: KAG7015833.1 (hypothetical protein SDJN02_23471, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAIAAFDQSLCSSTYKQTSSSFVFILFIELDFRGRDLRWDWCCIHFGCGGIGGWFWCNEG 60
          MAIAAFDQSLCSSTYKQTSSSFVFILFIELDFRGRDLRWDWCCIHFGCGGIGGWFWCNEG
Sbjct: 1  MAIAAFDQSLCSSTYKQTSSSFVFILFIELDFRGRDLRWDWCCIHFGCGGIGGWFWCNEG 60

Query: 61 CYQA 65
          CYQA
Sbjct: 61 CYQA 64

The following BLAST results are available for this feature:
BLAST of Carg19458 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015833.11.1e-31100.00hypothetical protein SDJN02_23471, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg19458 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg19458 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg19458 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19458-RACarg19458-RAmRNA