Carg19278 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19278
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	KH domain-containing protein
Location	Carg_Chr03: 9753247 .. 9757919 (+)
RNA-Seq Expression	Carg19278
Synteny	Carg19278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGGCGGGTATTGTAAACCCTCGTAGTGTCGTAACTCCAATCATCGCAACATCGGCGGCCTCTGTCCGTGGTGGTGCAGCTATTTCGTTTCTTCGCCGAGGTACTTTCTTCCGGTTGTTTTTTCTTTGTCATATTCATGGTGATTCTTTTGGCTCTGTGAATTAGGGTTTTCCTTTTCCCTCCAATTACCCTATAAACGCCAGTTTAGGAAACGTGTTGATGGTTTTCAAGATTAGTCGTGCTTTGACCAGTGTCTTTACCGCTACATGATCCATTGGACTATCTTGGTTTTGGTGGAAGCCTTAATTTTTTTTCTCTAAGGGGAATGAGTTGAAATGCTGTCGACTAGGTTGTGGTTGTGACTCGGACGAAGACTTTCACGGTCTTGTAAGTTCCCACAAAACAAGGCTTTTTATGCTCGGTGTTTAGATTCCATTATATTTTTGTTTAAAAATTCAATCGAGTTTGATAATGTTTTGGTCCGTGCACATAGTTCTTTCATGGTTTTATTGCGGGGGGGTGCTACGTTTCTTGACTGGTTACTAGGATCGAATATGACGATTACATTTTATTGGTTTCCATGTAATAAAAACAAGAAAACTTGATGGAGTTTATTTTCAGCAGATTGTTCATTTGTCGTTGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGGCTGCAGGTAAATTGAAATTCTATAATGGTGAGTGGGAAGCGACCTTATGGTCAGAGGGACAACAATGGAGACAATAAGAGCCACAAGAGACGGATTACCGACCAAGATGACTGGGTTAGTGATGAACTGGTCGTTTACCGAATACTGTGCCCTGATGAGGTCATTGGAAGTGTTATTGGTAAGAGTGGTAAAGTGATAAACTCAATAAGACAAGAAACAAGGGCAAAGATTAAGGTGGTTGATCCATTTCCTGGTGCCAAGGACCGTGTTATAACAATATTCTGCTTTGTCAAGGATAAGGAGGATGTGGACATTGATGATGAGTTCAATGACAGACAAACATTATGTGCAGCCCAGGATGCTCTTCTTAAAATTCATGCTGCTATTTCCAATGCGCTGGCTTCTGCTGGAGATTTAGACAGGAATCTGAGGGATAAGGAACAATGCCAAGTTCTCATCCCTTCGAGCCAATCTGCTAATGTCATTGGTAAAGCAGGATCAACTATTAAAAAGCTTAGAAGCAAGACAAGGACTAGTATAAGAATCATCCCCAAGGATGCCTCTGATCCAATTCACTCATGTGCCATGGAATTTGACAATTTCGTCATGGTTTGTTCACTTGGCTCTCTTTCCAATTTTTATTTAATATCACTGTTGATATTATGTAACTCCAATGTGATATATCCATCCGTATTTTTCATGTGAACTAATTAATCATCACTTTTGATATTGTTGTGTAGCATTTTTTATACGTTCATCATGCTTCAAACGTTGAATCCTGAATGGACGTTTCTGTTCCAATAATTTTGTGGTGCTGTTTGCTGATCTCAATACTATTTTTTTTTTCTTTTAATTAGATAGCTGGTGAACCTGATGGAGTAAGACGGGCACTATTTGCAATATCTTCAATTATGTATAAGTTCCCTCCTAGAGAAGAGATTCCTCTTGATACAAATGTAAATGAAGCCCCTCCTAGTATAATTATCCCGTCAGATGTTCCTCTGTATTCAACAGGTGGACTATATCCAAGTGCAGATCCCATTCTTCCTCCCAGATCTATTCCACCTATGCTTGGTGCCCAACATGTCCAGGATCTCCATGATTACCCTGATACTGGGAATGCATGGCCTCTCTATTCATCTGCTCTTCCTATGGTTTCTAGTATTAGCAGTCATCCTCCATCGGAGGAATTGGTGATTAGATTGTTATGCCCCCTTGATAACATTGGCCGTGTCATTGGTAAGGGTGGGGGTATCATTAAAAGCATAAGGCAAGCTAGCGGCGCTTGTGTGGAAGTTGATGATTCCAAGCGTGATTGTGATGAATGCTTAATCACTATCTCGTCATTTGAGGTACTATCACTCCTTTCATAATAGACAAAAAGAGTTCTATTCATCCAATGTCTTTGATTGCATGTTGGTCTTCTATATACCATTTTGAAGGTGGGCTTATTTGCAGAATTTGGAATAAAGTCAAAACATGAATATGCACAATTCTACAGTGGTTTCAAAATTTGAAAAGTGTTTTTCATAATGTTATTGCAAAACGAACATGAAAGAATGGGAACTGACATTCTACATATCAAACGTAGTAGAATTCCAGAATACATTTCTATTCAGGAAAAAAGAAGATTTGACCTCTCACTCGTACGGTACCCTTTGTCTTATCTGAAATATTGGCATGATATTCAACTTAAGTCGTCAAACAATTTGTAACATGATATTCAACTTGCTTACTATGTGTGGAGCATTAGCTTTCTGTTTGGTTCTTTTATTTGCATTCTCATTCATGTTGGAACCGATTATTTATTTTAAATAATACATTGATGATCTTGATTTTTCATGTCTTTGTTCAGTCTTTGGATGATCTGAAATCAATGGCCGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGAATGGTGATCATGCGATTACTTGTTCCATCTAAAGTTATTGGTTGTATTATTGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCATCTAGAGCTGATATCCGTATTTCTAAGGGTGACAAAATTAAGTGTGCTGCTGCCAATGATGAACTTGTTGAGGTTTGCTTTATGAATGTTAATTAGTCCTGAATGCTTTATGCAGTTTTTCTTACTTTGCACTTTTTATTTTTTAATGTATTTTTGCAGGTAACTGGTAATGTTGGCAGTGTGAGAGATGCATTGGTCCAGATCGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACCTTGCTGTCGGTACTGATTCCATGTATTCATCTGGTTCCAGTTTTTCGATGCCATCTGTATTGCCTTCTGTTTCTCCTGGTGCTCCACCAATGGGCTATGACCAGAGGGCTGAAAGTGGAAGCGGTTTAGGCGCTCTCTCTTCAAGTAGCATATATGGATATGGTTCACTGTCGGTAGGTGTCATAAGCGAACTTTTATTGATTGCAGCACATCAGTACCTTTCTTTTTGCAAACAGTAATAGAATCGTCGTTACTCAAGTCTTTTTTGAAAAACACAATTGCTTAGTACCAATAAGACGATGAGGTCAACATTTGTCAAAATGCGATGATTGAGAGAGATGCCCAGCTTCAACTTCGATATGGGTATCTGTGTTTTTATCTTTTTGGGAGAGAGAAAGATCATTTATTATCGTTATCTGTGGTGTATATCTTTCTGGTGATATTGAAGGGATTTATTTATTCCACTTTCTGATCTTTTCTGGCATATTAAAACCTTTTTGTACTTGTATCAGATGGGAGACAATGGCTATGGATCCATGCCCTCATATTCATCCAAGTTGTATGGAGGGTCAGTGTCCACCTTATTTTATTTAAAAATGCGACATGTTTTTGTTGTTTAATTTATTTAGTTGATGTATCAAATTGTAAGCAACATGTTTACATTTATTGTTTTTATGTGTAGGCTGCCTCCTCCATCTTCTCTTGAGATGTTGATCCCAGCAAATGCCGCTGGTAAAGTTATTGGAAAAGGAGGGGCTAATATCGCCAACATTAGGAAGGTTGGTTTATTTGCTGTCTTCATTTTACAATTATTCATATTCTTTCAATTTTTCACGACTATTTTTGTGTGAAGATGCTAGGTAAATTCAAGGAATGTTTTCTTTCTTTTTTTTTTTTCTTTTTTTAATCACATATTTCTTACATCGGTCAATTGGAAAACAGTTCTAATGTCACACCAAGTATATGTACATGTATGATGAAAAAGTGAAAGATTTCCCTGTTCTCCAATCTCCCACTTGGATAGTATTTATTTTCTTTTTTTCATTTTTAGGCTTTTGATTTTCTTACAGAGAATGTGGAACTTTTTTCTCCTGTTGTTCTGAAGACTCTGCTTTCTAAGAAGCAGAGATGTGCCGTAGCATGATATGCTTTGTGATGCATCAGTTGTTAAAATTTTAGGTTATCAGATGAATTAAGTTGAGTAAAGCTATTAGAATAGAAAGATGTTGATTGTTAAAAACCTTACATCATTACATTAGTATGCTTGAAAGATTGGAATTTGTAAAAATATACTCAATGTGCTTCAATAATAACTAAATTTGAATTTTCTGTTGTTTTAATGTCTTAATGTTAGAAAATAGCCTTTTCTCTTCTCCATGACACATATCACGTTTGTTCTCTCGCATATTTCTTAGACTTTTAGATTGTTTGGAAAAGCTTTTGGGATTAGTAAAACACTTTTACCACATCCAATGCTTATTCTTATTCTTTAGAATAGAAAGATGTACCCTTGCAATGCTTATTCTTTTGTTATGTGGCATTTTTGAGTAGTGAGTGTATAACATTCTTGTTCATTGTTCAGATATCAGGAGCGCTGATAGAGATTTCAGACTCTAAGTCATCTCGAGGTGATCGTATTGCTCTTATATCTGGTACATCTGAACAGAAGCGCACAGCTGAAAACTTGATTCAGGCATTTATAATGGCTACATGA

mRNA sequence

AAGGGCGGGTATTGTAAACCCTCGTAGTGTCGTAACTCCAATCATCGCAACATCGGCGGCCTCTGTCCGTGGTGGTGCAGCTATTTCGTTTCTTCGCCGAGGTACTTTCTTCCGGTTGTTTTTTCTTTGTCATATTCATGGTGATTCTTTTGGCTCTGTGAATTAGGGTTTTCCTTTTCCCTCCAATTACCCTATAAACGCCAGTTTAGGAAACGTGTTGATGGTTTTCAAGATTAGTCGTGCTTTGACCAGTGTCTTTACCGCTACATGATCCATTGGACTATCTTGGTTTTGGTGGAAGCCTTAATTTTTTTTCTCTAAGGGGAATGAGTTGAAATGCTGTCGACTAGGTTGTGGTTGTGACTCGGACGAAGACTTTCACGGTCTTGTAAATTGAAATTCTATAATGGTGAGTGGGAAGCGACCTTATGGTCAGAGGGACAACAATGGAGACAATAAGAGCCACAAGAGACGGATTACCGACCAAGATGACTGGGTTAGTGATGAACTGGTCGTTTACCGAATACTGTGCCCTGATGAGGTCATTGGAAGTGTTATTGGTAAGAGTGGTAAAGTGATAAACTCAATAAGACAAGAAACAAGGGCAAAGATTAAGGTGGTTGATCCATTTCCTGGTGCCAAGGACCGTGTTATAACAATATTCTGCTTTGTCAAGGATAAGGAGGATGTGGACATTGATGATGAGTTCAATGACAGACAAACATTATGTGCAGCCCAGGATGCTCTTCTTAAAATTCATGCTGCTATTTCCAATGCGCTGGCTTCTGCTGGAGATTTAGACAGGAATCTGAGGGATAAGGAACAATGCCAAGTTCTCATCCCTTCGAGCCAATCTGCTAATGTCATTGGTAAAGCAGGATCAACTATTAAAAAGCTTAGAAGCAAGACAAGGACTAGTATAAGAATCATCCCCAAGGATGCCTCTGATCCAATTCACTCATGTGCCATGGAATTTGACAATTTCGTCATGATAGCTGGTGAACCTGATGGAGTAAGACGGGCACTATTTGCAATATCTTCAATTATGTATAAGTTCCCTCCTAGAGAAGAGATTCCTCTTGATACAAATGTAAATGAAGCCCCTCCTAGTATAATTATCCCGTCAGATGTTCCTCTGTATTCAACAGGTGGACTATATCCAAGTGCAGATCCCATTCTTCCTCCCAGATCTATTCCACCTATGCTTGGTGCCCAACATGTCCAGGATCTCCATGATTACCCTGATACTGGGAATGCATGGCCTCTCTATTCATCTGCTCTTCCTATGGTTTCTAGTATTAGCAGTCATCCTCCATCGGAGGAATTGGTGATTAGATTGTTATGCCCCCTTGATAACATTGGCCGTGTCATTGGTAAGGGTGGGGGTATCATTAAAAGCATAAGGCAAGCTAGCGGCGCTTGTGTGGAAGTTGATGATTCCAAGCGTGATTGTGATGAATGCTTAATCACTATCTCGTCATTTGAGTCTTTGGATGATCTGAAATCAATGGCCGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGAATGGTGATCATGCGATTACTTGTTCCATCTAAAGTTATTGGTTGTATTATTGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCATCTAGAGCTGATATCCGTATTTCTAAGGGTGACAAAATTAAGTGTGCTGCTGCCAATGATGAACTTGTTGAGGTAACTGGTAATGTTGGCAGTGTGAGAGATGCATTGGTCCAGATCGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACCTTGCTGTCGGTACTGATTCCATGTATTCATCTGGTTCCAGTTTTTCGATGCCATCTGTATTGCCTTCTGTTTCTCCTGGTGCTCCACCAATGGGCTATGACCAGAGGGCTGAAAGTGGAAGCGGTTTAGGCGCTCTCTCTTCAAGTAGCATATATGGATATGGTTCACTGTCGGTAGGTGTCATAAGCGAACTTTTATTGATTGCAGCACATCAGTACCTTTCTTTTTGCAAACAGGATTTATTTATTCCACTTTCTGATCTTTTCTGGCATATTAAAACCTTTTTGTACTTGTATCAGATGGGAGACAATGGCTATGGATCCATGCCCTCATATTCATCCAAGTTGTATGGAGGGCTGCCTCCTCCATCTTCTCTTGAGATGTTGATCCCAGCAAATGCCGCTGGTAAAGTTATTGGAAAAGGAGGGGCTAATATCGCCAACATTAGGAAGATATCAGGAGCGCTGATAGAGATTTCAGACTCTAAGTCATCTCGAGGTGATCGTATTGCTCTTATATCTGGTACATCTGAACAGAAGCGCACAGCTGAAAACTTGATTCAGGCATTTATAATGGCTACATGA

Coding sequence (CDS)

ATGGTGAGTGGGAAGCGACCTTATGGTCAGAGGGACAACAATGGAGACAATAAGAGCCACAAGAGACGGATTACCGACCAAGATGACTGGGTTAGTGATGAACTGGTCGTTTACCGAATACTGTGCCCTGATGAGGTCATTGGAAGTGTTATTGGTAAGAGTGGTAAAGTGATAAACTCAATAAGACAAGAAACAAGGGCAAAGATTAAGGTGGTTGATCCATTTCCTGGTGCCAAGGACCGTGTTATAACAATATTCTGCTTTGTCAAGGATAAGGAGGATGTGGACATTGATGATGAGTTCAATGACAGACAAACATTATGTGCAGCCCAGGATGCTCTTCTTAAAATTCATGCTGCTATTTCCAATGCGCTGGCTTCTGCTGGAGATTTAGACAGGAATCTGAGGGATAAGGAACAATGCCAAGTTCTCATCCCTTCGAGCCAATCTGCTAATGTCATTGGTAAAGCAGGATCAACTATTAAAAAGCTTAGAAGCAAGACAAGGACTAGTATAAGAATCATCCCCAAGGATGCCTCTGATCCAATTCACTCATGTGCCATGGAATTTGACAATTTCGTCATGATAGCTGGTGAACCTGATGGAGTAAGACGGGCACTATTTGCAATATCTTCAATTATGTATAAGTTCCCTCCTAGAGAAGAGATTCCTCTTGATACAAATGTAAATGAAGCCCCTCCTAGTATAATTATCCCGTCAGATGTTCCTCTGTATTCAACAGGTGGACTATATCCAAGTGCAGATCCCATTCTTCCTCCCAGATCTATTCCACCTATGCTTGGTGCCCAACATGTCCAGGATCTCCATGATTACCCTGATACTGGGAATGCATGGCCTCTCTATTCATCTGCTCTTCCTATGGTTTCTAGTATTAGCAGTCATCCTCCATCGGAGGAATTGGTGATTAGATTGTTATGCCCCCTTGATAACATTGGCCGTGTCATTGGTAAGGGTGGGGGTATCATTAAAAGCATAAGGCAAGCTAGCGGCGCTTGTGTGGAAGTTGATGATTCCAAGCGTGATTGTGATGAATGCTTAATCACTATCTCGTCATTTGAGTCTTTGGATGATCTGAAATCAATGGCCGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGAATGGTGATCATGCGATTACTTGTTCCATCTAAAGTTATTGGTTGTATTATTGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCATCTAGAGCTGATATCCGTATTTCTAAGGGTGACAAAATTAAGTGTGCTGCTGCCAATGATGAACTTGTTGAGGTAACTGGTAATGTTGGCAGTGTGAGAGATGCATTGGTCCAGATCGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACCTTGCTGTCGGTACTGATTCCATGTATTCATCTGGTTCCAGTTTTTCGATGCCATCTGTATTGCCTTCTGTTTCTCCTGGTGCTCCACCAATGGGCTATGACCAGAGGGCTGAAAGTGGAAGCGGTTTAGGCGCTCTCTCTTCAAGTAGCATATATGGATATGGTTCACTGTCGGTAGGTGTCATAAGCGAACTTTTATTGATTGCAGCACATCAGTACCTTTCTTTTTGCAAACAGGATTTATTTATTCCACTTTCTGATCTTTTCTGGCATATTAAAACCTTTTTGTACTTGTATCAGATGGGAGACAATGGCTATGGATCCATGCCCTCATATTCATCCAAGTTGTATGGAGGGCTGCCTCCTCCATCTTCTCTTGAGATGTTGATCCCAGCAAATGCCGCTGGTAAAGTTATTGGAAAAGGAGGGGCTAATATCGCCAACATTAGGAAGATATCAGGAGCGCTGATAGAGATTTCAGACTCTAAGTCATCTCGAGGTGATCGTATTGCTCTTATATCTGGTACATCTGAACAGAAGCGCACAGCTGAAAACTTGATTCAGGCATTTATAATGGCTACATGA

Protein sequence

MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAAISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISSHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLIAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQAFIMAT

Homology

[Close]

BLAST of Carg19278 vs. NCBI nr
Match: KAG7034729.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 666/666 (100.00%), Postives = 666/666 (100.00%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
           SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
           AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 666

[Close]

BLAST of Carg19278 vs. NCBI nr
Match: XP_022925920.1 (KH domain-containing protein At4g18375-like [Cucurbita moschata])

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 622/666 (93.39%), Postives = 623/666 (93.54%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRDNNGDNKSH+RRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDNNGDNKSHRRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELVIRLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
           SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
                                           MGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 624

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 624

[Close]

BLAST of Carg19278 vs. NCBI nr
Match: KAG6581437.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1182.2 bits (3057), Expect = 0.0e+00
Identity = 622/666 (93.39%), Postives = 622/666 (93.39%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRDNNGDNKSHKR ITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDNNGDNKSHKRWITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELVIRLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
           SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
                                           MGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 624

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 624

[Close]

BLAST of Carg19278 vs. NCBI nr
Match: XP_022978831.1 (KH domain-containing protein At4g18375-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 618/666 (92.79%), Postives = 621/666 (93.24%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKR YGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRSYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKD+EDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDREDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAG+PDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGDPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELV+RLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVVRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
            LDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 YLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
                                           MGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 624

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 624

[Close]

BLAST of Carg19278 vs. NCBI nr
Match: XP_023544103.1 (KH domain-containing protein At4g18375-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1173.3 bits (3034), Expect = 0.0e+00
Identity = 618/667 (92.65%), Postives = 622/667 (93.25%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRDNNGDN SHKRRIT+QDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDNNGDNNSHKRRITNQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQ+ANVIGKAGSTIKK+RSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQTANVIGKAGSTIKKIRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPD+GNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELVIRLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
           SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLY-GGLPPPSSLE 600
                                           MGDNGYGSMPSYSSKLY GGLPPPSSLE
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGGLPPPSSLE 600

Query: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 660
           MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI
Sbjct: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 625

Query: 661 QAFIMAT 667
           QAFIMAT
Sbjct: 661 QAFIMAT 625

[Close]

BLAST of Carg19278 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 5.0e-149
Identity = 325/681 (47.72%), Postives = 431/681 (63.29%), Query Frame = 0


Query: 5   KRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQE 64
           KR   QR+N+  N++ KRRI+  D    DELVVYRILCP +V+G VIGKSGKVIN+IR  
Sbjct: 6   KRKQIQRNNSESNRNQKRRIS-HDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHN 65

Query: 65  TRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAAISNA 124
           T+AKIKV D   G   RVITI+C VK+K++ +I    ++ + LC AQDALLK++ AI   
Sbjct: 66  TKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAI--- 125

Query: 125 LASAGDLDRNLR------DKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKD 184
              A D + N +      D ++C++L+P SQS+++IGKAG  IK++R +TR S++++ KD
Sbjct: 126 --VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 185

Query: 185 ASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAP-PSII 244
            SDP H CAME+DN V+I+GEP+ V++ALFA+S+IMYK  PRE IPLD+   + P  S+I
Sbjct: 186 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 245

Query: 245 IPSDV--PLYSTGGLYPSADPILPP-RSIPPMLGAQHVQDLHDYPDT-GNAWPLYSSALP 304
           +PSD+   +Y   G Y + D IL     +P    A  V D   Y +T  N  P+++S+LP
Sbjct: 246 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 305

Query: 305 MVSSISSHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDC--DE 364
           +         SEELV ++LCPL NI RVIGKGG  IK IR+ASG+C+EV+DS+  C  DE
Sbjct: 306 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 365

Query: 365 CLITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIIN 424
           C+I +++ ES DD+KSMAVE VLLLQE IND++   V M+LLV SKVIGC+IGKSGS+IN
Sbjct: 366 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 425

Query: 425 EIRKSSRADIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERD--V 484
           EIRK + A+I ISKG K       D+LVEV+G V SVRDAL+QIVLRLR+D L ++D   
Sbjct: 426 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 485

Query: 485 GHNLAVGTDS-MYSSGSS---FSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYG 544
                  TD+  + SGSS   +++PS + S++                     S+S  +G
Sbjct: 486 TRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA---------------------STSGFHG 545

Query: 545 YGSLSVGVISELLLIAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYS 604
           YGS                                          +  GDN  GS   YS
Sbjct: 546 YGS------------------------------------------FPAGDNVLGSTGPYS 605

Query: 605 SKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALI 664
              YG LP  S+LE+LIPA+A  KV+GKGG N+ NIR+ISGA+IEIS SK+S GD IAL+
Sbjct: 606 ---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALL 606

Query: 665 SGTSEQKRTAENLIQAFIMAT 667
           SGT EQ R AENL+QAF+M+T
Sbjct: 666 SGTLEQMRCAENLVQAFVMST 606

[Close]

BLAST of Carg19278 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.8e-42
Identity = 182/646 (28.17%), Postives = 290/646 (44.89%), Query Frame = 0


Query: 38  YRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDI 97
           YRILC D   G VIGKSG +I SIRQ T A I V +  PG  +R+I I     D    D 
Sbjct: 70  YRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI----SDNRRRDP 129

Query: 98  DDEFNDRQTLCAAQDALLKIHAAISNALASAGDLDRNLRDKEQ------------CQVLI 157
           D       +   AQ+AL  +H  I  + A  G       ++E              ++++
Sbjct: 130 DGRM---PSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVV 189

Query: 158 PSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDGVRR 217
                  ++GK G  I+++R +T+T IRI+P++++ P   C    +  V I GE + V+ 
Sbjct: 190 SRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELNAVKN 249

Query: 218 ALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRSIPP 277
           AL  +SS + +   R+        +    S     D   Y       S+D    PR    
Sbjct: 250 ALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDD--YMPQLRRQSSDRF--PRG--- 309

Query: 278 MLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISSHPPSEELVIRLLCPLDNIGRVIGKG 337
                + ++ +      N    Y+   P V  +  +  SEELV ++LCP D I RV+G+ 
Sbjct: 310 -----NFRNNNFSSRQSN----YAEEAPAV-PVGENVYSEELVFQILCPADKIVRVVGES 369

Query: 338 GGIIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKIND--- 397
            GII  ++   G  V V D     DE +ITISS E+ DD    A E +L +Q +I D   
Sbjct: 370 QGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIP 429

Query: 398 DEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKI-KCAAANDELVEV 457
           D+  ++  RLLVPS+   C+ GK+GS ++EI + +   ++I   ++I +CA+ ND ++++
Sbjct: 430 DKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQI 489

Query: 458 TGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLP-SVSPGA 517
           TG + + R+ALV++ L LR    KE                     S     P S S   
Sbjct: 490 TGEIRAAREALVELTLLLRSHMFKE--------------------LSQKETPPASTSTTG 549

Query: 518 PPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLIAAHQYLSFCKQDLFIPLSDL 577
           P  G     E  S    + S       +L++  +S +L      + S  K          
Sbjct: 550 PLEGVAGVMEVASSNNTIQSREGPTSSNLNLQQVSTILPQFKEGFGSVAK---------- 609

Query: 578 FWHIKTFLYLYQMGDNGY-GSMPSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIA 637
                        G++ +   +P  +S++   L   S+LE+++P     K++ K    +A
Sbjct: 610 ------------AGESEHREEVPVTTSRMAVPLVTRSTLEVVLPEAVVPKLVTKSRNKLA 646

Query: 638 NIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQAFIMA 666
            I + SGA + I + +      I  ISGT EQ   A++L+Q FI++
Sbjct: 670 QISEWSGASVTIVEDRPEETQNIIRISGTPEQAERAQSLLQGFILS 646

[Close]

BLAST of Carg19278 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 5.1e-29
Identity = 118/440 (26.82%), Postives = 215/440 (48.86%), Query Frame = 0


Query: 288 YSSALPMVSSISSHPP-------SEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACV 347
           ++++  M ++ +  PP       ++++V ++LC  +N G VIG GG +++ +   +GA +
Sbjct: 426 FTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFI 485

Query: 348 EVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKIND-------DEG--GMVIMR 407
            V ++  DC+E LI +++ E+ +   S A + ++L+  ++ +       D G    +  R
Sbjct: 486 NVGNTLDDCEERLIAVTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITAR 545

Query: 408 LLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDK-IKCAAANDELVEVTGNVGSVRD 467
           L+VP+  IGC++GK G I++E+RK++ A I+I K ++  KC + ND++V++TG   +VR+
Sbjct: 546 LVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVRE 605

Query: 468 ALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAPPMGYDQRAE 527
           A+  I  RLRD            +V ++SM +        S+  S S       YD++++
Sbjct: 606 AIFHITSRLRD------------SVFSNSMKN--------SLAKSSSALTTERFYDRQSD 665

Query: 528 SGSGLGALSSSSIYGYGSLSVGVISE-LLLIAAHQYLSFCKQ---DLFI----PLSDLF- 587
           +   +G+  S S     S S+   SE   L  +H  +++ +    D +I    P  D F 
Sbjct: 666 NPLSIGSHQSVSNPATNSSSLHRRSEDSFLSGSHSSVNYSRSVGTDPYIRPEDPFPDRFN 725

Query: 588 -----WHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPP--------------------- 647
                 H     +     DN +  +    S+L+   PP                      
Sbjct: 726 PSAGYSHNFGRRFTMDHSDNSH-HLTEAPSRLWASPPPAAPRGLSDASGGLSSARAGHVL 785

Query: 648 -----------SSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIAL 665
                      +++E+ +PANA   V G+ G N+  +R+ISGA + I +      DRI +
Sbjct: 786 GSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLRQISGARVIIHEPPLGTSDRIIV 844

[Close]

BLAST of Carg19278 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-23
Identity = 96/337 (28.49%), Postives = 156/337 (46.29%), Query Frame = 0


Query: 37  VYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVD 96
           V+R+L P + +GS+IG+ G VI  I +ETRA+IK++D  PG  +R +     V  KE+ +
Sbjct: 188 VFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAV----MVSGKEEPE 247

Query: 97  IDDEFNDRQTLCAAQDALLKIHAAISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGK 156
                    +L  + D LL++H  I + L            K   ++L+P+SQ+ ++IGK
Sbjct: 248 --------SSLPPSMDGLLRVHMRIVDGLDGEAS-QAPPPSKVSTRLLVPASQAGSLIGK 307

Query: 157 AGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYK 216
            G T+K ++  +   +R++    S+ +   A++ D  V + GEP  V RAL  I+S + K
Sbjct: 308 QGGTVKAIQEASACIVRVL---GSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRK 367

Query: 217 F-PPREEIPLDTNVNEAPPSIIIPSDVPLYSTG---GLYPSADPILPPRSIPPMLGAQHV 276
           F   R  IP   N  + P   +     P  S G   G  PS        + PP +     
Sbjct: 368 FLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPR 427

Query: 277 QDLHDYPDTGNAWPL----------YSSALPMVSSISSHPP--SEELVIRLLCPLDNIGR 336
            D +  P      P+          Y    PM   +SS PP  ++++  ++  PL     
Sbjct: 428 HDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSSAPPMVAQQVTQQMQIPLSYADA 487

Query: 337 VIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITIS 358
           VIG  G  I   R+ SGA V + +++    E  + +S
Sbjct: 488 VIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVS 508

[Close]

BLAST of Carg19278 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-13
Identity = 109/379 (28.76%), Postives = 171/379 (45.12%), Query Frame = 0


Query: 306 ELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDL 365
           + V R++ P+  +G +IG+ G  IK + + + A ++V D   +  + ++ IS  E  +  
Sbjct: 73  DCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAY 132

Query: 366 KSMAVETVLLLQEKI-----NDDE----GGMVI--MRLLVPSKVIGCIIGKSGSIINEIR 425
            S A++ VL +  ++     NDD+     G V   +RLLV S     +IGK GS+I  I 
Sbjct: 133 MSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIV 192

Query: 426 KSSRADIRISKGDKIKCAAANDE-LVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNL 485
           ++S A +RI   ++    AA DE +V++ G    +  AL  IV  LR        V H +
Sbjct: 193 ENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFL-----VDHTV 252

Query: 486 AVGTDSMYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGV 545
               +  Y +  S +                 +  AES S L  +SS+ +          
Sbjct: 253 VPLFEKQYLARVSQTRQE--------------EPLAESKSSLHTISSNLME--------- 312

Query: 546 ISELLLIAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLP 605
             +  L+A  + L F ++D  +              +   G + Y   P  S++   GL 
Sbjct: 313 -PDFSLLARREPL-FLERDSRVDSR-----------VQPSGVSIYSQDPVLSARHSPGLA 372

Query: 606 PPSSL-------EMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIAL-I 665
             SS         M IP + A  +IG  GANIA IR+ SGA I I +  S   D+I + I
Sbjct: 373 RVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKE--SPHPDQITVEI 408

[Close]

BLAST of Carg19278 vs. ExPASy TrEMBL
Match: A0A6J1EJK7 (KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC111433193 PE=4 SV=1)

HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 622/666 (93.39%), Postives = 623/666 (93.54%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRDNNGDNKSH+RRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDNNGDNKSHRRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELVIRLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
           SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
                                           MGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 624

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 624

[Close]

BLAST of Carg19278 vs. ExPASy TrEMBL
Match: A0A6J1IP47 (KH domain-containing protein At4g18375-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478672 PE=4 SV=1)

HSP 1 Score: 1177.2 bits (3044), Expect = 0.0e+00
Identity = 618/666 (92.79%), Postives = 621/666 (93.24%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKR YGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRSYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKD+EDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDREDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAG+PDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGDPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELV+RLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVVRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
            LDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 YLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLEM 600
                                           MGDNGYGSMPSYSSKLYGGLPPPSSLEM
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGLPPPSSLEM 600

Query: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 660
           LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ
Sbjct: 601 LIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLIQ 624

Query: 661 AFIMAT 667
           AFIMAT
Sbjct: 661 AFIMAT 624

[Close]

BLAST of Carg19278 vs. ExPASy TrEMBL
Match: A0A6J1IRB7 (KH domain-containing protein At4g18375-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478672 PE=4 SV=1)

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 618/667 (92.65%), Postives = 621/667 (93.10%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKR YGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRSYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKD+EDVDIDDEFNDRQTLCAAQDALLKIHAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDREDVDIDDEFNDRQTLCAAQDALLKIHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS
Sbjct: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNFVMIAG+PDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS
Sbjct: 181 DPIHSCAMEFDNFVMIAGDPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300
           DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS
Sbjct: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISS 300

Query: 301 HPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFE 360
           HPPSEELV+RLLCPLDNIGRVIGKGGG IKSIRQASGACVEVDDSKRDCDECLITISSFE
Sbjct: 301 HPPSEELVVRLLCPLDNIGRVIGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFE 360

Query: 361 SLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420
            LDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD
Sbjct: 361 YLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRAD 420

Query: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480
           IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM
Sbjct: 421 IRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSM 480

Query: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLLI 540
           YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS          
Sbjct: 481 YSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLS---------- 540

Query: 541 AAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGG-LPPPSSLE 600
                                           MGDNGYGSMPSYSSKLYGG LPPPSSLE
Sbjct: 541 --------------------------------MGDNGYGSMPSYSSKLYGGRLPPPSSLE 600

Query: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 660
           MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI
Sbjct: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 625

Query: 661 QAFIMAT 667
           QAFIMAT
Sbjct: 661 QAFIMAT 625

[Close]

BLAST of Carg19278 vs. ExPASy TrEMBL
Match: A0A1S3AZT7 (KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484357 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/667 (86.06%), Postives = 603/667 (90.40%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRD NGDNK +KRRIT+QDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDV++DDEFNDRQTLCAAQDALLK+HAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           I+NALASAGDLDR  RDKEQCQ+LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNF +I+GEP+GVRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPS
Sbjct: 181 DPIHSCAMEFDNFAVISGEPEGVRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSIS 300
           DVPLYS GGLYPSADPILPPRSIPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGIS 300

Query: 301 SHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSF 360
            HPPSEELV+R+LCP DNIGRVIGKGGG IKSIRQASGA VEVDD+KRDCDEC+ITISSF
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360

Query: 361 ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRA 420
           ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RA
Sbjct: 361 ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRA 420

Query: 421 DIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDS 480
           DIRISKGDK+KCA+++DELVEVTG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDS
Sbjct: 421 DIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDS 480

Query: 481 MYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLL 540
           MY+SGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGL  LSSS +YGYGSLS         
Sbjct: 481 MYTSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLS--------- 540

Query: 541 IAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLE 600
                                            MGDNGYGSM SYSSKLYGGLPPPSSLE
Sbjct: 541 ---------------------------------MGDNGYGSMSSYSSKLYGGLPPPSSLE 600

Query: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 660
           MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI
Sbjct: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 625

Query: 661 QAFIMAT 667
           QAFIMAT
Sbjct: 661 QAFIMAT 625

[Close]

BLAST of Carg19278 vs. ExPASy TrEMBL
Match: A0A5D3CPJ5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009130 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 574/667 (86.06%), Postives = 603/667 (90.40%), Query Frame = 0


Query: 1   MVSGKRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60
           MVSGKRPYGQRD NGDNK +KRRIT+QDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS
Sbjct: 1   MVSGKRPYGQRDYNGDNKGYKRRITEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINS 60

Query: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAA 120
           IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDV++DDEFNDRQTLCAAQDALLK+HAA
Sbjct: 61  IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120

Query: 121 ISNALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDAS 180
           I+NALASAGDLDR  RDKEQCQ+LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180

Query: 181 DPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPS 240
           DPIHSCAMEFDNF +I+GEP+GVRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPS
Sbjct: 181 DPIHSCAMEFDNFAVISGEPEGVRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPS 240

Query: 241 DVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSIS 300
           DVPLYS GGLYPSADPILPPRSIPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGIS 300

Query: 301 SHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSF 360
            HPPSEELV+R+LCP DNIGRVIGKGGG IKSIRQASGA VEVDD+KRDCDEC+ITISSF
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360

Query: 361 ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRA 420
           ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RA
Sbjct: 361 ESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRA 420

Query: 421 DIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDS 480
           DIRISKGDK+KCA+++DELVEVTG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDS
Sbjct: 421 DIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDS 480

Query: 481 MYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYGYGSLSVGVISELLL 540
           MY+SGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGL  LSSS +YGYGSLS         
Sbjct: 481 MYTSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLS--------- 540

Query: 541 IAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYSSKLYGGLPPPSSLE 600
                                            MGDNGYGSM SYSSKLYGGLPPPSSLE
Sbjct: 541 ---------------------------------MGDNGYGSMSSYSSKLYGGLPPPSSLE 600

Query: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 660
           MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI
Sbjct: 601 MLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALISGTSEQKRTAENLI 625

Query: 661 QAFIMAT 667
           QAFIMAT
Sbjct: 661 QAFIMAT 625

[Close]

BLAST of Carg19278 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 596.7 bits (1537), Expect = 2.4e-170
Identity = 358/695 (51.51%), Postives = 462/695 (66.47%), Query Frame = 0


Query: 4   GKRPYGQ-RDNNGDNKSHKRRITDQD------DWVSDELVVYRILCPDEVIGSVIGKSGK 63
           GKR + + RDNN DN  ++RR    +      D   D +VVYRILCP  V+GSVIGKSGK
Sbjct: 5   GKRTHNRFRDNNNDNNRNQRRRLSYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGK 64

Query: 64  VINSIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKED-VDID-DEFNDRQTLCAAQDAL 123
           VIN IRQETRA+IKVVDPFPG  +RVITIFC V +K+D VDI+  E +    LC+AQ AL
Sbjct: 65  VINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAAL 124

Query: 124 LKIHAAISNALASAGD---LDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTS 183
           LK+H AI  +LA+A +   +DR+  D  +C++L+PSSQ + VIGK+GS IK +R +TR +
Sbjct: 125 LKVHDAIVASLATAAENTKIDRD--DFRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRAN 184

Query: 184 IRIIPKDASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNE 243
           ++++ KD SDP H+CAM+FDN VMI+GE + V++ALFA+S+IMYK  PRE+IPLDT V E
Sbjct: 185 VKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQE 244

Query: 244 APPSIIIPSDVPLYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDT---------G 303
            P SIIIPSD+ +Y   GLYPS D I            QH  ++  +  T          
Sbjct: 245 VPASIIIPSDLSIYPQAGLYPSQDSIF-----------QHGANVSSFIGTLPQGYGENAA 304

Query: 304 NAWPLYS-SALPMVSSISSHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVE 363
           N  P++S SALP+V        SE+L I+++C    IGRVIGKGG  IK IRQASG+ +E
Sbjct: 305 NPVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIE 364

Query: 364 VDDSKRD-CDECLITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIG 423
           V+DS+ +  D+C+IT+++ ES DDLKSMAVE VLLLQEKIND++   V M+LLV SKVIG
Sbjct: 365 VNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLLQEKINDEDEDKVKMQLLVSSKVIG 424

Query: 424 CIIGKSGSIINEIRKSSRADIRISKGDKI-KCAAANDELVEVTGNVGSVRDALVQIVLRL 483
           CIIGKSGSII+EIRK ++ADI ISKG+   KCA  NDELVE++G V +VRDAL+QIVLRL
Sbjct: 425 CIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRL 484

Query: 484 RDDALKERDVGHN----LAVGTDSMYSSGSS---FSMPSVLPSVSPGAPPMGYDQRAESG 543
           RDD L++R+ G           ++ +SS SS    ++P    S  P    + +++R E+G
Sbjct: 485 RDDVLRDRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETG 544

Query: 544 SGLGAL-SSSSIYGYGSLSVGVISELLLIAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLY 603
           S +  L SS  IYGYGS                                          +
Sbjct: 545 SSMSMLPSSGGIYGYGS------------------------------------------F 604

Query: 604 QMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEI 663
            +G+  YGS  SYSS LYGGLP  +++E+ IPANA GKV+G+GG N+ NIR+ISGA+IEI
Sbjct: 605 PVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRRISGAMIEI 644

Query: 664 SDSKSSRGDRIALISGTSEQKRTAENLIQAFIMAT 667
           SDSK+S G R+ALISGTSEQKRTAENL QAFIM+T
Sbjct: 665 SDSKNSHGGRVALISGTSEQKRTAENLFQAFIMST 644

[Close]

BLAST of Carg19278 vs. TAIR 10
Match: AT4G18375.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 529.6 bits (1363), Expect = 3.5e-150
Identity = 325/681 (47.72%), Postives = 431/681 (63.29%), Query Frame = 0


Query: 5   KRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQE 64
           KR   QR+N+  N++ KRRI+  D    DELVVYRILCP +V+G VIGKSGKVIN+IR  
Sbjct: 6   KRKQIQRNNSESNRNQKRRIS-HDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHN 65

Query: 65  TRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAAISNA 124
           T+AKIKV D   G   RVITI+C VK+K++ +I    ++ + LC AQDALLK++ AI   
Sbjct: 66  TKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAI--- 125

Query: 125 LASAGDLDRNLR------DKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKD 184
              A D + N +      D ++C++L+P SQS+++IGKAG  IK++R +TR S++++ KD
Sbjct: 126 --VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 185

Query: 185 ASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAP-PSII 244
            SDP H CAME+DN V+I+GEP+ V++ALFA+S+IMYK  PRE IPLD+   + P  S+I
Sbjct: 186 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 245

Query: 245 IPSDV--PLYSTGGLYPSADPILPP-RSIPPMLGAQHVQDLHDYPDT-GNAWPLYSSALP 304
           +PSD+   +Y   G Y + D IL     +P    A  V D   Y +T  N  P+++S+LP
Sbjct: 246 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 305

Query: 305 MVSSISSHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDC--DE 364
           +         SEELV ++LCPL NI RVIGKGG  IK IR+ASG+C+EV+DS+  C  DE
Sbjct: 306 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 365

Query: 365 CLITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIIN 424
           C+I +++ ES DD+KSMAVE VLLLQE IND++   V M+LLV SKVIGC+IGKSGS+IN
Sbjct: 366 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 425

Query: 425 EIRKSSRADIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERD--V 484
           EIRK + A+I ISKG K       D+LVEV+G V SVRDAL+QIVLRLR+D L ++D   
Sbjct: 426 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 485

Query: 485 GHNLAVGTDS-MYSSGSS---FSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYG 544
                  TD+  + SGSS   +++PS + S++                     S+S  +G
Sbjct: 486 TRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA---------------------STSGFHG 545

Query: 545 YGSLSVGVISELLLIAAHQYLSFCKQDLFIPLSDLFWHIKTFLYLYQMGDNGYGSMPSYS 604
           YGS                                          +  GDN  GS   YS
Sbjct: 546 YGS------------------------------------------FPAGDNVLGSTGPYS 605

Query: 605 SKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSRGDRIALI 664
              YG LP  S+LE+LIPA+A  KV+GKGG N+ NIR+ISGA+IEIS SK+S GD IAL+
Sbjct: 606 ---YGRLPSSSALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHIALL 606

Query: 665 SGTSEQKRTAENLIQAFIMAT 667
           SGT EQ R AENL+QAF+M+T
Sbjct: 666 SGTLEQMRCAENLVQAFVMST 606

[Close]

BLAST of Carg19278 vs. TAIR 10
Match: AT4G18375.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 448.7 bits (1153), Expect = 7.9e-126
Identity = 267/542 (49.26%), Postives = 360/542 (66.42%), Query Frame = 0


Query: 5   KRPYGQRDNNGDNKSHKRRITDQDDWVSDELVVYRILCPDEVIGSVIGKSGKVINSIRQE 64
           KR   QR+N+  N++ KRRI+  D    DELVVYRILCP +V+G VIGKSGKVIN+IR  
Sbjct: 6   KRKQIQRNNSESNRNQKRRIS-HDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHN 65

Query: 65  TRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFNDRQTLCAAQDALLKIHAAISNA 124
           T+AKIKV D   G   RVITI+C VK+K++ +I    ++ + LC AQDALLK++ AI   
Sbjct: 66  TKAKIKVFDQLHGCSQRVITIYCSVKEKQE-EIGFTKSENEPLCCAQDALLKVYDAI--- 125

Query: 125 LASAGDLDRNLR------DKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKD 184
              A D + N +      D ++C++L+P SQS+++IGKAG  IK++R +TR S++++ KD
Sbjct: 126 --VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKD 185

Query: 185 ASDPIHSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAP-PSII 244
            SDP H CAME+DN V+I+GEP+ V++ALFA+S+IMYK  PRE IPLD+   + P  S+I
Sbjct: 186 VSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVI 245

Query: 245 IPSDV--PLYSTGGLYPSADPILPP-RSIPPMLGAQHVQDLHDYPDT-GNAWPLYSSALP 304
           +PSD+   +Y   G Y + D IL     +P    A  V D   Y +T  N  P+++S+LP
Sbjct: 246 VPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLP 305

Query: 305 MVSSISSHPPSEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDC--DE 364
           +         SEELV ++LCPL NI RVIGKGG  IK IR+ASG+C+EV+DS+  C  DE
Sbjct: 306 VTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDE 365

Query: 365 CLITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLVPSKVIGCIIGKSGSIIN 424
           C+I +++ ES DD+KSMAVE VLLLQE IND++   V M+LLV SKVIGC+IGKSGS+IN
Sbjct: 366 CVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVIN 425

Query: 425 EIRKSSRADIRISKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERD--V 484
           EIRK + A+I ISKG K       D+LVEV+G V SVRDAL+QIVLRLR+D L ++D   
Sbjct: 426 EIRKRTNANICISKGKK-------DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVA 485

Query: 485 GHNLAVGTDS-MYSSGSS---FSMPSVLPSVSPGAPPMGYDQRAESGSGLGALSSSSIYG 528
                  TD+  + SGSS   +++PS + S+   A   G+       +G   L S+  Y 
Sbjct: 486 TRKPPARTDNCSFLSGSSNAGYTLPSFMSSM---ASTSGFHGYGSFPAGDNVLGSTGPYS 530

[Close]

BLAST of Carg19278 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 229.9 bits (585), Expect = 5.8e-60
Identity = 173/515 (33.59%), Postives = 272/515 (52.82%), Query Frame = 0


Query: 6   RPYGQRDNNGDNKSHKRRITDQDDWVSD-ELVVYRILCPDEVIGSVIGKSGKVINSIRQE 65
           RP    D+NG +K  + R  D+D  V D +  V+R LCP + IGSVIG+ G ++  +R +
Sbjct: 20  RPQSDYDDNGGSK-RRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRND 79

Query: 66  TRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFND-RQTLCAAQDALLKIHAAISN 125
           TR+KI++ +  PG  +RVITI+         D  + F D  + L  AQDAL +IH  +  
Sbjct: 80  TRSKIRIGEAIPGCDERVITIY------SPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 139

Query: 126 ALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPI 185
             A + D       +   ++L+PS Q   ++G+ G  ++ +RS+T   IRI+ KD + P+
Sbjct: 140 DDARSEDSPEG-EKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPL 199

Query: 186 HSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVP 245
             CA+  D  + I+GE   V++AL  I+S +++ P R +                     
Sbjct: 200 --CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQ--------------------N 259

Query: 246 LYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISSHPP 305
           L S+ G YP A  ++     P ++G   +  +  Y      W     + P+     + PP
Sbjct: 260 LLSSSGGYP-AGSLMSHAGGPRLVGLAPL--MGSYGRDAGDW-----SRPLYQPPRNDPP 319

Query: 306 SEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFESLD 365
           + E  IRL+ P++NI  VIGKGG +I  +RQ + A ++VD S+ + ++CLITIS+ E  +
Sbjct: 320 ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFE 379

Query: 366 DLKSMAVETVLLLQEKINDD---EGGMV--IMRLLVPSKVIGCIIGKSGSIINEIRKSSR 425
           D  S  +E V+ LQ K +D    + G+V    RLLVPS  IGCI+GK G+II E+R+ ++
Sbjct: 380 DAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTK 439

Query: 426 ADIRI-SKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGT 485
           A+IRI  K +  K A+ +DE+V+++G +   ++AL+QI  RLR +               
Sbjct: 440 ANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR----------- 478

Query: 486 DSMYSSGSSFSMPSVLPSVSPGAPPMG----YDQR 509
                 G+  ++  VLP V P AP  G    YD R
Sbjct: 500 -----EGAVSALMPVLPYV-PVAPDAGDRFDYDSR 478

[Close]

BLAST of Carg19278 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 229.9 bits (585), Expect = 5.8e-60
Identity = 173/515 (33.59%), Postives = 272/515 (52.82%), Query Frame = 0


Query: 6   RPYGQRDNNGDNKSHKRRITDQDDWVSD-ELVVYRILCPDEVIGSVIGKSGKVINSIRQE 65
           RP    D+NG +K  + R  D+D  V D +  V+R LCP + IGSVIG+ G ++  +R +
Sbjct: 20  RPQSDYDDNGGSK-RRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRND 79

Query: 66  TRAKIKVVDPFPGAKDRVITIFCFVKDKEDVDIDDEFND-RQTLCAAQDALLKIHAAISN 125
           TR+KI++ +  PG  +RVITI+         D  + F D  + L  AQDAL +IH  +  
Sbjct: 80  TRSKIRIGEAIPGCDERVITIY------SPSDETNAFGDGEKVLSPAQDALFRIHDRVVA 139

Query: 126 ALASAGDLDRNLRDKEQCQVLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPI 185
             A + D       +   ++L+PS Q   ++G+ G  ++ +RS+T   IRI+ KD + P+
Sbjct: 140 DDARSEDSPEG-EKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIV-KDRNMPL 199

Query: 186 HSCAMEFDNFVMIAGEPDGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVP 245
             CA+  D  + I+GE   V++AL  I+S +++ P R +                     
Sbjct: 200 --CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQ--------------------N 259

Query: 246 LYSTGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMVSSISSHPP 305
           L S+ G YP A  ++     P ++G   +  +  Y      W     + P+     + PP
Sbjct: 260 LLSSSGGYP-AGSLMSHAGGPRLVGLAPL--MGSYGRDAGDW-----SRPLYQPPRNDPP 319

Query: 306 SEELVIRLLCPLDNIGRVIGKGGGIIKSIRQASGACVEVDDSKRDCDECLITISSFESLD 365
           + E  IRL+ P++NI  VIGKGG +I  +RQ + A ++VD S+ + ++CLITIS+ E  +
Sbjct: 320 ATEFFIRLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFE 379

Query: 366 DLKSMAVETVLLLQEKINDD---EGGMV--IMRLLVPSKVIGCIIGKSGSIINEIRKSSR 425
           D  S  +E V+ LQ K +D    + G+V    RLLVPS  IGCI+GK G+II E+R+ ++
Sbjct: 380 DAYSPTIEAVMRLQPKCSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTK 439

Query: 426 ADIRI-SKGDKIKCAAANDELVEVTGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGT 485
           A+IRI  K +  K A+ +DE+V+++G +   ++AL+QI  RLR +               
Sbjct: 440 ANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR----------- 478

Query: 486 DSMYSSGSSFSMPSVLPSVSPGAPPMG----YDQR 509
                 G+  ++  VLP V P AP  G    YD R
Sbjct: 500 -----EGAVSALMPVLPYV-PVAPDAGDRFDYDSR 478

The following BLAST results are available for this feature:

BLAST of Carg19278 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7034729.1	0.0e+00	100.00	KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022925920.1	0.0e+00	93.39	KH domain-containing protein At4g18375-like [Cucurbita moschata]	[more]
KAG6581437.1	0.0e+00	93.39	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022978831.1	0.0e+00	92.79	KH domain-containing protein At4g18375-like isoform X2 [Cucurbita maxima]	[more]
XP_023544103.1	0.0e+00	92.65	KH domain-containing protein At4g18375-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P58223	5.0e-149	47.72	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
Q8W4B1	1.8e-42	28.17	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4KDN0	5.1e-29	26.82	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q9SR13	1.1e-23	28.49	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	1.4e-13	28.76	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg19278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJK7	0.0e+00	93.39	KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IP47	0.0e+00	92.79	KH domain-containing protein At4g18375-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1IRB7	0.0e+00	92.65	KH domain-containing protein At4g18375-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A1S3AZT7	0.0e+00	86.06	KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A5D3CPJ5	0.0e+00	86.06	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Carg19278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46190.1	2.4e-170	51.51	RNA-binding KH domain-containing protein	[more]
AT4G18375.2	3.5e-150	47.72	RNA-binding KH domain-containing protein	[more]
AT4G18375.1	7.9e-126	49.26	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	5.8e-60	33.59	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	5.8e-60	33.59	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 305..378 e-value: 1.2E-5 score: 34.8 coord: 137..215 e-value: 4.3E-12 score: 56.2 coord: 386..460 e-value: 3.7E-10 score: 49.8 coord: 34..107 e-value: 2.8E-9 score: 46.8 coord: 594..664 e-value: 1.9E-13 score: 60.7
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 309..358 e-value: 1.4E-10 score: 40.8 coord: 38..86 e-value: 7.1E-12 score: 45.0 coord: 598..660 e-value: 2.7E-13 score: 49.5 coord: 390..455 e-value: 5.0E-13 score: 48.7 coord: 141..211 e-value: 2.6E-12 score: 46.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 385..463 e-value: 9.5E-18 score: 65.7 coord: 137..216 e-value: 6.8E-14 score: 53.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 592..665 e-value: 5.0E-19 score: 69.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 305..382 e-value: 7.5E-12 score: 46.9
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 33..95 e-value: 2.6E-13 score: 51.3
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 301..358
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 131..220
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 33..87
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 381..471
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 588..663
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR10288:SF137	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 4..522 coord: 582..648
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 4..522 coord: 582..648
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 138..210 score: 14.550131
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 35..85 score: 12.537663
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 595..659 score: 16.646452
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 387..455 score: 16.038519
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 306..373 score: 12.453811
None	No IPR available	CDD	cd00105	KH-I	coord: 597..660 e-value: 2.09021E-15 score: 69.1259
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 140..211 e-value: 9.8913E-12 score: 58.6419
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 308..357 e-value: 2.79285E-14 score: 65.9607
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 37..118 e-value: 1.27907E-15 score: 69.8127
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 390..456 e-value: 5.55875E-19 score: 79.0575

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19278-RA	Carg19278-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding