Carg19225 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19225
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Carg_Chr19: 8441632 .. 8443605 (-)
RNA-Seq Expression	Carg19225
Synteny	Carg19225

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAGAACCCTACTGAGGCCTTCATTCCTCTGCTCTTCATCTCGTCCCCTTCGTTTACTCGATCCTAAATCATATTCTTTGTATCGAAATGGGAAATTATCGCCTAATAGTTCAGATTGCAATGTCACTCGCGGTTTCGGCGAGAATTTCAGGTTTGTCTTTACGAACACTCTTCTCCCTCCTCCCGAATGGATAGAACCCTTTGTGGATGTCTCTGATGTAGTTTCGAGCTCTCAACGCCCAGACCCATCTCCATGGGTGGCTCAAATTTTGAATCTTCTGGATGGGTCTTCGAACATGGAAGCTAATTTAGATTCGTTTTGTCAGAAGTTTTTGATTAAGTTATCGCCAAATTTTGTTGCATTTGTTTTACAATCTGTTGAACTTCGTGAGGTTCCTGAAATTGCTTTTCGGTTCTTTTATTGGGCGGGTAAGCAGAAGAAATATGTTCATAAGATCGAATGTTACGTATCTTTGATTGAACTCTTAACTTTTTCGGCCGATTTGGTGAAAATCAGATTGATGTTCTGTGAACTTAAAGGTAGGGGTCTGTTAATGACTCTATCAGCGGCTAACTCTTTGATTAAGAGCTTTGGGAATCATGGGCTTGTTGAGGAATTGTTGTGGGTTTGGCGTCGAATGAAGGAAAATGGGATTGAGCCGAGTTTGTATACTTATAACTTTTTGGTTAATGGGTTGGTGAATTCAATGTTTATTGAGTCTGCTGAGAGGGTTTTTGAGGTTATGGATGGTGGGAAGATTGTGCCCGACACTGTGACATATAATGTTATGATCAAAGGATATTGCAAGGCTGGGAAAATGCACAAGGCAATGGAGAAATTTAGAGCTATGGAGATGAAGAACGTGAACCCGGATAAGATTACGTACATGACATTGATCCAGGCGTGTTATTCGGAAGGAGATTTCGATACTTGTCTGAGTCTTTACCTTGAAATGGAAGAAAGGGGACTGGAAATTCCTTCTCATTCTTATAGTTTAGTTATTGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTAGAGAAGATGAATCAGAAAGATTGTAGAGCGAACGTTGCAATTTATACAGCTTTGATCGATTCGTACTCGAAAAGTGGGAGCATGGGAGAGGCCATGAGGCTGTTTAAGAGGATGAAAAATGAGGGGCTTGAACCGGATGCTGTAACGTACAGTGTCGTCGTTAATGGATTGTGCAAGAGTGGTAGATTGGAGGAAGCAATGGAATATTTTGATTTCTGCAGAAACAAAGGAGTGGGGATCAATGCAATGTTCTATGCTAGTATGATTGATGGACTTGGAAAGGCTGGGAGAATTGTAGAAGCAGAAAATCTTTTCGAAGAAATGTTCGAAAAGGGTTGTGCTCGAGATTCGTATTGTTATAACGCCATTATAGATGCACTAGCCAAGCATGGGAAGATTGATCAAGCTTTAACACTTTTTGGGAGGATGGAAGAAGAAGGTTGTGATCAAACAGTTTATACGTACACAATTCTTATCGACGGGCTGTTCAAGGAGCACAGAAATGAAGAGGCGATAAAGCTATGGGACACGATGATCGACAAAGGAATCACCCCAACGGTAGCTTCTTTCAGAGCTCTTGCCATAGGGCTATGTCTTTGTGGCAAGGTAGCCAGGGCTTGCAAAATCTTGGATGACCTTGCCCCTATGGGTGTCATTCCGGAGACAGCATTCGAGGATATGATCAACGCATTGTGCAAAGCCCGACGCGTCAAGGAAGCCTGCAAATTGGCAGATGGAATCGTGGATCGGGGCCGGGAAATACCAGGGAGAATACGTACCGTTCTTATCAATGGCTTGAGAAAGGCAGGTAACTCTGATTTAGCTATCAAACTGATGCATAGCAAGATTGGCATAGGATATGATCGGATGGGTAGTATTAAAAGGCGTGTCAAGTTTAGAACACTTATTGAAAATTGA

mRNA sequence

ATGAGAAGAACCCTACTGAGGCCTTCATTCCTCTGCTCTTCATCTCGTCCCCTTCGTTTACTCGATCCTAAATCATATTCTTTGTATCGAAATGGGAAATTATCGCCTAATAGTTCAGATTGCAATGTCACTCGCGGTTTCGGCGAGAATTTCAGGTTTGTCTTTACGAACACTCTTCTCCCTCCTCCCGAATGGATAGAACCCTTTGTGGATGTCTCTGATGTAGTTTCGAGCTCTCAACGCCCAGACCCATCTCCATGGGTGGCTCAAATTTTGAATCTTCTGGATGGGTCTTCGAACATGGAAGCTAATTTAGATTCGTTTTGTCAGAAGTTTTTGATTAAGTTATCGCCAAATTTTGTTGCATTTGTTTTACAATCTGTTGAACTTCGTGAGGTTCCTGAAATTGCTTTTCGGTTCTTTTATTGGGCGGGTAAGCAGAAGAAATATGTTCATAAGATCGAATGTTACGTATCTTTGATTGAACTCTTAACTTTTTCGGCCGATTTGGTGAAAATCAGATTGATGTTCTGTGAACTTAAAGGTAGGGGTCTGTTAATGACTCTATCAGCGGCTAACTCTTTGATTAAGAGCTTTGGGAATCATGGGCTTGTTGAGGAATTGTTGTGGGTTTGGCGTCGAATGAAGGAAAATGGGATTGAGCCGAGTTTGTATACTTATAACTTTTTGGTTAATGGGTTGGTGAATTCAATGTTTATTGAGTCTGCTGAGAGGGTTTTTGAGGTTATGGATGGTGGGAAGATTGTGCCCGACACTGTGACATATAATGTTATGATCAAAGGATATTGCAAGGCTGGGAAAATGCACAAGGCAATGGAGAAATTTAGAGCTATGGAGATGAAGAACGTGAACCCGGATAAGATTACGTACATGACATTGATCCAGGCGTGTTATTCGGAAGGAGATTTCGATACTTGTCTGAGTCTTTACCTTGAAATGGAAGAAAGGGGACTGGAAATTCCTTCTCATTCTTATAGTTTAGTTATTGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTAGAGAAGATGAATCAGAAAGATTGTAGAGCGAACGTTGCAATTTATACAGCTTTGATCGATTCGTACTCGAAAAGTGGGAGCATGGGAGAGGCCATGAGGCTGTTTAAGAGGATGAAAAATGAGGGGCTTGAACCGGATGCTGTAACGTACAGTGTCGTCGTTAATGGATTGTGCAAGAGTGGTAGATTGGAGGAAGCAATGGAATATTTTGATTTCTGCAGAAACAAAGGAGTGGGGATCAATGCAATGTTCTATGCTAGTATGATTGATGGACTTGGAAAGGCTGGGAGAATTGTAGAAGCAGAAAATCTTTTCGAAGAAATGTTCGAAAAGGGTTGTGCTCGAGATTCGTATTGTTATAACGCCATTATAGATGCACTAGCCAAGCATGGGAAGATTGATCAAGCTTTAACACTTTTTGGGAGGATGGAAGAAGAAGGTTGTGATCAAACAGTTTATACGTACACAATTCTTATCGACGGGCTGTTCAAGGAGCACAGAAATGAAGAGGCGATAAAGCTATGGGACACGATGATCGACAAAGGAATCACCCCAACGGTAGCTTCTTTCAGAGCTCTTGCCATAGGGCTATGTCTTTGTGGCAAGGTAGCCAGGGCTTGCAAAATCTTGGATGACCTTGCCCCTATGGGTGTCATTCCGGAGACAGCATTCGAGGATATGATCAACGCATTGTGCAAAGCCCGACGCGTCAAGGAAGCCTGCAAATTGGCAGATGGAATCGTGGATCGGGGCCGGGAAATACCAGGGAGAATACGTACCGTTCTTATCAATGGCTTGAGAAAGGCAGGTAACTCTGATTTAGCTATCAAACTGATGCATAGCAAGATTGGCATAGGATATGATCGGATGGGTAGTATTAAAAGGCGTGTCAAGTTTAGAACACTTATTGAAAATTGA

Coding sequence (CDS)

ATGAGAAGAACCCTACTGAGGCCTTCATTCCTCTGCTCTTCATCTCGTCCCCTTCGTTTACTCGATCCTAAATCATATTCTTTGTATCGAAATGGGAAATTATCGCCTAATAGTTCAGATTGCAATGTCACTCGCGGTTTCGGCGAGAATTTCAGGTTTGTCTTTACGAACACTCTTCTCCCTCCTCCCGAATGGATAGAACCCTTTGTGGATGTCTCTGATGTAGTTTCGAGCTCTCAACGCCCAGACCCATCTCCATGGGTGGCTCAAATTTTGAATCTTCTGGATGGGTCTTCGAACATGGAAGCTAATTTAGATTCGTTTTGTCAGAAGTTTTTGATTAAGTTATCGCCAAATTTTGTTGCATTTGTTTTACAATCTGTTGAACTTCGTGAGGTTCCTGAAATTGCTTTTCGGTTCTTTTATTGGGCGGGTAAGCAGAAGAAATATGTTCATAAGATCGAATGTTACGTATCTTTGATTGAACTCTTAACTTTTTCGGCCGATTTGGTGAAAATCAGATTGATGTTCTGTGAACTTAAAGGTAGGGGTCTGTTAATGACTCTATCAGCGGCTAACTCTTTGATTAAGAGCTTTGGGAATCATGGGCTTGTTGAGGAATTGTTGTGGGTTTGGCGTCGAATGAAGGAAAATGGGATTGAGCCGAGTTTGTATACTTATAACTTTTTGGTTAATGGGTTGGTGAATTCAATGTTTATTGAGTCTGCTGAGAGGGTTTTTGAGGTTATGGATGGTGGGAAGATTGTGCCCGACACTGTGACATATAATGTTATGATCAAAGGATATTGCAAGGCTGGGAAAATGCACAAGGCAATGGAGAAATTTAGAGCTATGGAGATGAAGAACGTGAACCCGGATAAGATTACGTACATGACATTGATCCAGGCGTGTTATTCGGAAGGAGATTTCGATACTTGTCTGAGTCTTTACCTTGAAATGGAAGAAAGGGGACTGGAAATTCCTTCTCATTCTTATAGTTTAGTTATTGGTGGGCTCTGTAAGCAAGGAAAATGTATGGAAGCTTATGCTGTTTTAGAGAAGATGAATCAGAAAGATTGTAGAGCGAACGTTGCAATTTATACAGCTTTGATCGATTCGTACTCGAAAAGTGGGAGCATGGGAGAGGCCATGAGGCTGTTTAAGAGGATGAAAAATGAGGGGCTTGAACCGGATGCTGTAACGTACAGTGTCGTCGTTAATGGATTGTGCAAGAGTGGTAGATTGGAGGAAGCAATGGAATATTTTGATTTCTGCAGAAACAAAGGAGTGGGGATCAATGCAATGTTCTATGCTAGTATGATTGATGGACTTGGAAAGGCTGGGAGAATTGTAGAAGCAGAAAATCTTTTCGAAGAAATGTTCGAAAAGGGTTGTGCTCGAGATTCGTATTGTTATAACGCCATTATAGATGCACTAGCCAAGCATGGGAAGATTGATCAAGCTTTAACACTTTTTGGGAGGATGGAAGAAGAAGGTTGTGATCAAACAGTTTATACGTACACAATTCTTATCGACGGGCTGTTCAAGGAGCACAGAAATGAAGAGGCGATAAAGCTATGGGACACGATGATCGACAAAGGAATCACCCCAACGGTAGCTTCTTTCAGAGCTCTTGCCATAGGGCTATGTCTTTGTGGCAAGGTAGCCAGGGCTTGCAAAATCTTGGATGACCTTGCCCCTATGGGTGTCATTCCGGAGACAGCATTCGAGGATATGATCAACGCATTGTGCAAAGCCCGACGCGTCAAGGAAGCCTGCAAATTGGCAGATGGAATCGTGGATCGGGGCCGGGAAATACCAGGGAGAATACGTACCGTTCTTATCAATGGCTTGAGAAAGGCAGGTAACTCTGATTTAGCTATCAAACTGATGCATAGCAAGATTGGCATAGGATATGATCGGATGGGTAGTATTAAAAGGCGTGTCAAGTTTAGAACACTTATTGAAAATTGA

Protein sequence

MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLLPPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNFVAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCELKGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIVDRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN

Homology

[Close]

BLAST of Carg19225 vs. NCBI nr
Match: KAG7011962.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1327.4 bits (3434), Expect = 0.0e+00
Identity = 657/657 (100.00%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Carg19225 vs. NCBI nr
Match: KAG6572351.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 656/657 (99.85%), Postives = 657/657 (100.00%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Carg19225 vs. NCBI nr
Match: XP_022953016.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1317.4 bits (3408), Expect = 0.0e+00
Identity = 649/657 (98.78%), Postives = 656/657 (99.85%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGK+SPNSSDCNVTRGFGENFRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKVSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRL+FCEL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKI+PDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIMPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAV EKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSK+GSMGEAMRLF+RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKNGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Carg19225 vs. NCBI nr
Match: XP_023554431.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1307.0 bits (3381), Expect = 0.0e+00
Identity = 646/657 (98.33%), Postives = 651/657 (99.09%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSR L LLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRSLPLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELR+VPEIA RFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRL+FCEL
Sbjct: 121 VAFVLQSVELRDVPEIAIRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KG+GLLMTLSAANSLIKS GNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGKGLLMTLSAANSLIKSLGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAV EKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSGSMGEAMRLF+RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMIN LCKARRVKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINVLCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 657

[Close]

BLAST of Carg19225 vs. NCBI nr
Match: XP_022969029.1 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 643/657 (97.87%), Postives = 648/657 (98.63%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDP SYSLYRNGKLSPNSSDCNVTRGFGE FRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPNSYSLYRNGKLSPNSSDCNVTRGFGEYFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIA RFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRL+FCEL
Sbjct: 121 VAFVLQSVELREVPEIAIRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KG+GLLMTLSAANSLIKSFGNHGLVEELLWVWRRM ENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGKGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMNENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEI SHSYSLVIGGLCKQGKCMEAYAV EKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIASHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSGSMGEAMRLF+RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQAL LFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARR KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRFKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Carg19225 vs. ExPASy Swiss-Prot
Match: Q9LR67 (Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g03560 PE=2 SV=1)

HSP 1 Score: 899.0 bits (2322), Expect = 3.1e-260
Identity = 434/657 (66.06%), Postives = 533/657 (81.13%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRR   +P  +   +RP      +S+ LY+NG    + S C+       + R+VF ++ L
Sbjct: 1   MRRFYRKPFSVPLLNRP--HCSSQSHCLYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPF DVSD+V S++   PSPWV+QILNLLDGS++ME+NLD FC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           V+FVL+S E+RE P+IA+ FF W+ KQKKY H +ECYVSL+++L  + D+ +IR +  E+
Sbjct: 121 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           K     MT+SAAN+LIKSFG  G+VEELLWVWR+MKENGIEP+LYTYNFL+NGLV++MF+
Sbjct: 181 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           +SAERVFEVM+ G+I PD VTYN MIKGYCKAG+  KAMEK R ME +    DKITYMT+
Sbjct: 241 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACY++ DF +C++LY EM+E+G+++P H++SLVIGGLCK+GK  E Y V E M +K  
Sbjct: 301 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           + NVAIYT LID Y+KSGS+ +A+RL  RM +EG +PD VTYSVVVNGLCK+GR+EEA++
Sbjct: 361 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YF  CR  G+ IN+MFY+S+IDGLGKAGR+ EAE LFEEM EKGC RDSYCYNA+IDA  
Sbjct: 421 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 480

Query: 481 KHGKIDQALTLFGRM-EEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTV 540
           KH K+D+A+ LF RM EEEGCDQTVYTYTIL+ G+FKEHRNEEA+KLWD MIDKGITPT 
Sbjct: 481 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 540

Query: 541 ASFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGI 600
           A FRAL+ GLCL GKVARACKILD+LAPMGVI + A EDMIN LCKA R+KEACKLADGI
Sbjct: 541 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGI 600

Query: 601 VDRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIE 657
            +RGRE+PGRIRTV+IN LRK G +DLA+KLMHSKIGIGY+RMGS+KRRVKF TL+E
Sbjct: 601 TERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655

[Close]

BLAST of Carg19225 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.7e-64
Identity = 141/472 (29.87%), Postives = 251/472 (53.18%), Query Frame = 0


Query: 188 TLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNS-MFIESAERV 247
           T S  + ++KS+    L+++ L +    + +G  P + +YN +++  + S   I  AE V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 248 FEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYS 307
           F+ M   ++ P+  TYN++I+G+C AG +  A+  F  ME K   P+ +TY TLI     
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 308 EGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAI 367
               D    L   M  +GLE    SY++VI GLC++G+  E   VL +MN++    +   
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 368 YTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCR 427
           Y  LI  Y K G+  +A+ +   M   GL P  +TY+ +++ +CK+G +  AME+ D  R
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 428 NKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKID 487
            +G+  N   Y +++DG  + G + EA  +  EM + G +     YNA+I+     GK++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 488 QALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALA 547
            A+ +   M+E+G    V +Y+ ++ G  + +  +EA+++   M++KGI P   ++ +L 
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 548 IGLCLCGKVARACKILDDLAPMGVIP-ETAFEDMINALCKARRVKEACKLADGIVDRGRE 607
            G C   +   AC + +++  +G+ P E  +  +INA C    +++A +L + +V++G  
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 608 IPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
                 +VLINGL K   +  A +L+   + + Y+   S+   V + TLIEN
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLL---LKLFYEE--SVPSDVTYHTLIEN 599

[Close]

BLAST of Carg19225 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.4e-64
Identity = 168/612 (27.45%), Postives = 291/612 (47.55%), Query Frame = 0


Query: 56  TNTLLPPPEWIEPFVDVSDVVSS--SQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFL 115
           T+  +P P     F  VS ++ +   +  D      ++L++L   S    +     +  +
Sbjct: 29  TDVTVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSIL---SKPNWHKSPSLKSMV 88

Query: 116 IKLSPNFVAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLT---FSADL 175
             +SP+ V+  L S++L   P+ A  F +W  +  +Y H +  Y SL+ LL    +   +
Sbjct: 89  SAISPSHVS-SLFSLDLD--PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 148

Query: 176 VKIRLMF---CELKGRGLL-------------------MTLSAANSLIKSFGNHGLVEEL 235
            KIRL+    C+  G  L                    + +   N+L+ S    GLV+E+
Sbjct: 149 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 208

Query: 236 LWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAER-VFEVMDGGKIVPDTVTYNVMIK 295
             V+  M E+ + P++YTYN +VNG      +E A + V ++++ G + PD  TY  +I 
Sbjct: 209 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG-LDPDFFTYTSLIM 268

Query: 296 GYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCLSLYLEMEERGLEI 355
           GYC+   +  A + F  M +K    +++ Y  LI         D  + L+++M++     
Sbjct: 269 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 328

Query: 356 PSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAIYTALIDSYSKSGSMGEAMRLF 415
              +Y+++I  LC   +  EA  ++++M +   + N+  YT LIDS        +A  L 
Sbjct: 329 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 388

Query: 416 KRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINAMFYASMIDGLGKA 475
            +M  +GL P+ +TY+ ++NG CK G +E+A++  +   ++ +  N   Y  +I G  K+
Sbjct: 389 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 448

Query: 476 GRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKIDQALTLFGRMEEEGCDQTVYTY 535
             + +A  +  +M E+    D   YN++ID   + G  D A  L   M + G     +TY
Sbjct: 449 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 508

Query: 536 TILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAP 595
           T +ID L K  R EEA  L+D++  KG+ P V  + AL  G C  GKV  A  +L+ +  
Sbjct: 509 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 568

Query: 596 MGVIPET-AFEDMINALCKARRVKEACKLADGIVDRGREIPGRIRTVLINGLRKAGNSDL 639
              +P +  F  +I+ LC   ++KEA  L + +V  G +      T+LI+ L K G+ D 
Sbjct: 569 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 628

[Close]

BLAST of Carg19225 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 8.6e-61
Identity = 140/454 (30.84%), Postives = 221/454 (48.68%), Query Frame = 0


Query: 195 LIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMDGGK 254
           LIK F     + + + V   +++ G +P ++ YN L+NG      I+ A RV + M    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 189

Query: 255 IVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCL 314
             PDTVTYN+MI   C  GK+  A++    +   N  P  ITY  LI+A   EG  D  L
Sbjct: 190 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 249

Query: 315 SLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAIYTALIDSY 374
            L  EM  RGL+    +Y+ +I G+CK+G    A+ ++  +  K C  +V  Y  L+ + 
Sbjct: 250 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 309

Query: 375 SKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINA 434
              G   E  +L  +M +E  +P+ VTYS+++  LC+ G++EEAM      + KG+  +A
Sbjct: 310 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 369

Query: 435 MFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKIDQALTLFGR 494
             Y  +I    + GR+  A    E M   GC  D   YN ++  L K+GK DQAL +FG+
Sbjct: 370 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 429

Query: 495 MEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALAIGLCLCGK 554
           + E GC     +Y  +   L+       A+ +   M+  GI P   ++ ++   LC  G 
Sbjct: 430 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 489

Query: 555 VARACKILDDLAPMGVIPE-TAFEDMINALCKARRVKEACKLADGIVDRGREIPGRIRTV 614
           V  A ++L D+      P    +  ++   CKA R+++A  + + +V  G        TV
Sbjct: 490 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 549

Query: 615 LINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKR 648
           LI G+  AG    A++L +  + I      S KR
Sbjct: 550 LIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582

[Close]

BLAST of Carg19225 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.9e-60
Identity = 164/581 (28.23%), Postives = 272/581 (46.82%), Query Frame = 0


Query: 92  LNLLDGSSNMEANLDSFCQKFLIKLSPNFVAFVLQSVELREVPEIAFRFFYWAGKQKKYV 151
           LNL   SS +     SF       LS   V  +L S+  +     A R F  A K+  + 
Sbjct: 27  LNLTPPSSTI-----SFASPHSAALSSTDVK-LLDSLRSQPDDSAALRLFNLASKKPNFS 86

Query: 152 HKIECYVSLIELLTFSADLVKIRLMFCELKGRGLLMTLSAANSLIKSFGNHGLVEELLWV 211
            +   Y  ++  L  S     ++ +  ++K     M  S    LI+S+    L +E+L V
Sbjct: 87  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 146

Query: 212 --WRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMDGGKIVPDTVTYNVMIKGY 271
             W  + E G++P  + YN ++N LV+   ++  E     M    I PD  T+NV+IK  
Sbjct: 147 VDW-MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 206

Query: 272 CKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCLSLYLEMEERGLEIPS 331
           C+A ++  A+     M    + PD+ T+ T++Q    EGD D  L +  +M E G    +
Sbjct: 207 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 266

Query: 332 HSYSLVIGGLCKQGKCMEAYAVLEKM-NQKDCRANVAIYTALIDSYSKSGSMGEAMRLFK 391
            S ++++ G CK+G+  +A   +++M NQ     +   +  L++   K+G +  A+ +  
Sbjct: 267 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 326

Query: 392 RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINAMFYASMIDGLGKAG 451
            M  EG +PD  TY+ V++GLCK G ++EA+E  D    +    N + Y ++I  L K  
Sbjct: 327 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 386

Query: 452 RIVEAE-----------------------------------NLFEEMFEKGCARDSYCYN 511
           ++ EA                                     LFEEM  KGC  D + YN
Sbjct: 387 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 446

Query: 512 AIIDALAKHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDK 571
            +ID+L   GK+D+AL +  +ME  GC ++V TY  LIDG  K ++  EA +++D M   
Sbjct: 447 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 506

Query: 572 GITPTVASFRALAIGLCLCGKVARACKILDDLAPMGVIPET-AFEDMINALCKARRVKEA 631
           G++    ++  L  GLC   +V  A +++D +   G  P+   +  ++   C+   +K+A
Sbjct: 507 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 566

Query: 632 CKLADGIVDRGREIPGRIRTVLINGLRKAGNSDLAIKLMHS 634
             +   +   G E        LI+GL KAG  ++A KL+ S
Sbjct: 567 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

[Close]

BLAST of Carg19225 vs. ExPASy TrEMBL
Match: A0A6J1GLU6 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455532 PE=4 SV=1)

HSP 1 Score: 1317.4 bits (3408), Expect = 0.0e+00
Identity = 649/657 (98.78%), Postives = 656/657 (99.85%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGK+SPNSSDCNVTRGFGENFRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKVSPNSSDCNVTRGFGENFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRL+FCEL
Sbjct: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKI+PDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIMPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAV EKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSK+GSMGEAMRLF+RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKNGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Carg19225 vs. ExPASy TrEMBL
Match: A0A6J1I1D4 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111468147 PE=4 SV=1)

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 643/657 (97.87%), Postives = 648/657 (98.63%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRPSFLCSSSRPLRLLDP SYSLYRNGKLSPNSSDCNVTRGFGE FRFVFTNTLL
Sbjct: 1   MRRTLLRPSFLCSSSRPLRLLDPNSYSLYRNGKLSPNSSDCNVTRGFGEYFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           VAFVLQSVELREVPEIA RFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRL+FCEL
Sbjct: 121 VAFVLQSVELREVPEIAIRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLIFCEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           KG+GLLMTLSAANSLIKSFGNHGLVEELLWVWRRM ENGIEPSLYTYNFLVNGLVNSMFI
Sbjct: 181 KGKGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMNENGIEPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFDTCLSLYLEMEERGLEI SHSYSLVIGGLCKQGKCMEAYAV EKMNQKDC
Sbjct: 301 IQACYSEGDFDTCLSLYLEMEERGLEIASHSYSLVIGGLCKQGKCMEAYAVFEKMNQKDC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSGSMGEAMRLF+RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME
Sbjct: 361 RANVAIYTALIDSYSKSGSMGEAMRLFERMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA
Sbjct: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQAL LFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARR KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRFKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLVEN 657

[Close]

BLAST of Carg19225 vs. ExPASy TrEMBL
Match: A0A0A0K5P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047320 PE=4 SV=1)

HSP 1 Score: 1183.3 bits (3060), Expect = 0.0e+00
Identity = 586/657 (89.19%), Postives = 611/657 (93.00%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRR LLRPSF CSSSRPL LLDPKSYSLY NGKLS   SD     GF +NFRFVFTNTLL
Sbjct: 1   MRRALLRPSFRCSSSRPLHLLDPKSYSLYGNGKLSSKGSD----YGFSQNFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDV+SSSQ  DPSPWVAQILNLLDGSSNME NLDSFC+KF +KLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVISSSQPLDPSPWVAQILNLLDGSSNMEHNLDSFCRKFFVKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           V FVLQSVELRE PE+A RFF+WAGKQKKYVHKIEC+VSLIELLTFSADLVKIRL+F EL
Sbjct: 121 VTFVLQSVELREKPEVAVRFFFWAGKQKKYVHKIECHVSLIELLTFSADLVKIRLVFFEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           K RGLLMT SAANSLIKSFGN GLVEELLWVWRRMKENGI+PSLYTYNFLVNGLVNSMFI
Sbjct: 181 KDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAE+VFEVMDGGKIVPDTVTYN+MIKGYCKAGK+ KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSE DFDTCLSLYLEMEERGLEIP HSYSLVIGGLCKQ KCMEAYAV E MNQK C
Sbjct: 301 IQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSK+GSM EAMRLF+RMKNEG EPDAVTYSV+VNGLCKSGRL++ ME
Sbjct: 361 RANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
            FDFCRNKGV INAMFYAS+IDGLGKAGRI +AENLFEEM EKGCARDSYCYNAIIDALA
Sbjct: 421 LFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQAL LFGRMEEEGCDQTVYT+TILIDGLFKEH+NEEAIK WD MIDKGITPTVA
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA+R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLIN LRKAGNSDL IKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653

[Close]

BLAST of Carg19225 vs. ExPASy TrEMBL
Match: A0A6J1D2R3 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016800 PE=4 SV=1)

HSP 1 Score: 1178.7 bits (3048), Expect = 0.0e+00
Identity = 584/657 (88.89%), Postives = 614/657 (93.46%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRRTLLRP F  SSSRPL L+DPKS SLYRNGKL P +S+ NVT  FG N R VFTNTLL
Sbjct: 1   MRRTLLRPPFFYSSSRPLHLVDPKSCSLYRNGKLFPENSESNVTCVFGANSRCVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDVVSSSQ  DPSPWVAQILNLLDGS NMEANLDSFC+ FLIKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVVSSSQGVDPSPWVAQILNLLDGSPNMEANLDSFCRNFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           V+FVLQSVELRE PEIA RFFYW GKQKKYVHK+ECYVSLIELLTFSADLV+IRL+F EL
Sbjct: 121 VSFVLQSVELREKPEIALRFFYWTGKQKKYVHKLECYVSLIELLTFSADLVRIRLLFREL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           K +GLLM+LSAANSLIKSFGN GLVEELLWVWRRMKENGIEPSL+TYNFLVNGLV+SMFI
Sbjct: 181 KDKGLLMSLSAANSLIKSFGNLGLVEELLWVWRRMKENGIEPSLFTYNFLVNGLVSSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAERVFEVMD GKIVPDTVTYN+M+KGYC+AGK  KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAERVFEVMDSGKIVPDTVTYNIMMKGYCRAGKTQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACYSEGDFD+CLSLYLEMEE+G+EIPSHSYSLVIGGLCKQGKCMEAYAV EKMN+K  
Sbjct: 301 IQACYSEGDFDSCLSLYLEMEEKGVEIPSHSYSLVIGGLCKQGKCMEAYAVFEKMNRKGS 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALIDSYSKSG MGEAMRLF+RMKNEGLEPD VTYSVVVNGLCKSGRLE+AM 
Sbjct: 361 RANVAIYTALIDSYSKSGCMGEAMRLFERMKNEGLEPDEVTYSVVVNGLCKSGRLEDAMG 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YFDFCR+KGV INAMFYAS+IDGLGKAGRI EAENLFEEMF KGCARDSYCYNA+IDALA
Sbjct: 421 YFDFCRSKGVAINAMFYASIIDGLGKAGRIEEAENLFEEMFRKGCARDSYCYNALIDALA 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           K GKIDQAL LFGRME+EGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGI PT A
Sbjct: 481 KDGKIDQALALFGRMEDEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGIAPTAA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGLIPETAFEDMINTLCKAGRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLINGLRKAG++DLAIKLMHSKIGIGYDRMGSIKRRVKFRTLI+N
Sbjct: 601 DRGREIPGRIRTVLINGLRKAGDADLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIQN 657

[Close]

BLAST of Carg19225 vs. ExPASy TrEMBL
Match: A0A1S3C0U2 (pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495528 PE=4 SV=1)

HSP 1 Score: 1167.1 bits (3018), Expect = 0.0e+00
Identity = 581/657 (88.43%), Postives = 606/657 (92.24%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRR+LLRPSFLCSSSR LRL D KSYSLY NGKLS  SSD     GF +NFRFVFTNTLL
Sbjct: 1   MRRSLLRPSFLCSSSRSLRLPDHKSYSLYENGKLSSTSSD----YGFSQNFRFVFTNTLL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPFVDVSDV+SSS   DPSPWV QILNLLDGSSNME NLDSFC+KF IKLSPNF
Sbjct: 61  PPPEWIEPFVDVSDVISSSSPLDPSPWVTQILNLLDGSSNMEHNLDSFCRKFFIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           V FVLQSVELRE PEIA RFF+WAGKQKKYVHKIECYVSLIELLTFSADLVKIR +F EL
Sbjct: 121 VTFVLQSVELREKPEIAVRFFFWAGKQKKYVHKIECYVSLIELLTFSADLVKIRSVFFEL 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           K + LLMT  AANSLIKSFGN GLVEELLWVWRRMKENGI+PSLYTYNFLVNGLVNSMFI
Sbjct: 181 KDKDLLMTELAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFI 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           ESAE+VFEVMDGGK VPDTVTYN+MIKGYCKAGK+ KAMEKFR MEMKNV PDKITYMTL
Sbjct: 241 ESAEKVFEVMDGGKTVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTL 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACY+E DFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQ KCMEAYAV E MNQK C
Sbjct: 301 IQACYAERDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQRKCMEAYAVFETMNQKGC 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           RANVAIYTALID+YSKSGSM EAMRLF+RMKNEG EPDAVTYSV+VNGLCKSGR+E+ ME
Sbjct: 361 RANVAIYTALIDTYSKSGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRVEDGME 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
            F FCRNKGV INAMFYAS+IDGLGKAGRI +AENLFEEM EKGCARDSYCYNAIIDAL 
Sbjct: 421 LFYFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALT 480

Query: 481 KHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVA 540
           KHGKIDQAL LFGRMEEEGCDQTVYT+TILIDGLFKEH+NEEAIKLWD MIDKGITPTVA
Sbjct: 481 KHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKLWDKMIDKGITPTVA 540

Query: 541 SFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGIV 600
           SFRALAIGLCLCGKVARACKILDDLAPMG+IPETAFEDMIN LCKA+R+KEACKLADGIV
Sbjct: 541 SFRALAIGLCLCGKVARACKILDDLAPMGIIPETAFEDMINTLCKAQRIKEACKLADGIV 600

Query: 601 DRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
           DRGREIPGRIRTVLIN LRKAGNSDL IKLMHSKIGIGYDRMGSIKRRVKFRTL+EN
Sbjct: 601 DRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKRRVKFRTLLEN 653

[Close]

BLAST of Carg19225 vs. TAIR 10
Match: AT1G03560.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 899.0 bits (2322), Expect = 2.2e-261
Identity = 434/657 (66.06%), Postives = 533/657 (81.13%), Query Frame = 0


Query: 1   MRRTLLRPSFLCSSSRPLRLLDPKSYSLYRNGKLSPNSSDCNVTRGFGENFRFVFTNTLL 60
           MRR   +P  +   +RP      +S+ LY+NG    + S C+       + R+VF ++ L
Sbjct: 1   MRRFYRKPFSVPLLNRP--HCSSQSHCLYKNGDFLSDDSKCSPLSSSRTSVRWVFNSSSL 60

Query: 61  PPPEWIEPFVDVSDVVSSSQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFLIKLSPNF 120
           PPPEWIEPF DVSD+V S++   PSPWV+QILNLLDGS++ME+NLD FC+KFLIKLSPNF
Sbjct: 61  PPPEWIEPFNDVSDLVKSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNF 120

Query: 121 VAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLTFSADLVKIRLMFCEL 180
           V+FVL+S E+RE P+IA+ FF W+ KQKKY H +ECYVSL+++L  + D+ +IR +  E+
Sbjct: 121 VSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEI 180

Query: 181 KGRGLLMTLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFI 240
           K     MT+SAAN+LIKSFG  G+VEELLWVWR+MKENGIEP+LYTYNFL+NGLV++MF+
Sbjct: 181 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 240

Query: 241 ESAERVFEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTL 300
           +SAERVFEVM+ G+I PD VTYN MIKGYCKAG+  KAMEK R ME +    DKITYMT+
Sbjct: 241 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 300

Query: 301 IQACYSEGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDC 360
           IQACY++ DF +C++LY EM+E+G+++P H++SLVIGGLCK+GK  E Y V E M +K  
Sbjct: 301 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 360

Query: 361 RANVAIYTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAME 420
           + NVAIYT LID Y+KSGS+ +A+RL  RM +EG +PD VTYSVVVNGLCK+GR+EEA++
Sbjct: 361 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 420

Query: 421 YFDFCRNKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALA 480
           YF  CR  G+ IN+MFY+S+IDGLGKAGR+ EAE LFEEM EKGC RDSYCYNA+IDA  
Sbjct: 421 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 480

Query: 481 KHGKIDQALTLFGRM-EEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTV 540
           KH K+D+A+ LF RM EEEGCDQTVYTYTIL+ G+FKEHRNEEA+KLWD MIDKGITPT 
Sbjct: 481 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 540

Query: 541 ASFRALAIGLCLCGKVARACKILDDLAPMGVIPETAFEDMINALCKARRVKEACKLADGI 600
           A FRAL+ GLCL GKVARACKILD+LAPMGVI + A EDMIN LCKA R+KEACKLADGI
Sbjct: 541 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGI 600

Query: 601 VDRGREIPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIE 657
            +RGRE+PGRIRTV+IN LRK G +DLA+KLMHSKIGIGY+RMGS+KRRVKF TL+E
Sbjct: 601 TERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655

[Close]

BLAST of Carg19225 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.7 bits (631), Expect = 2.6e-65
Identity = 141/472 (29.87%), Postives = 251/472 (53.18%), Query Frame = 0


Query: 188 TLSAANSLIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNS-MFIESAERV 247
           T S  + ++KS+    L+++ L +    + +G  P + +YN +++  + S   I  AE V
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 248 FEVMDGGKIVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYS 307
           F+ M   ++ P+  TYN++I+G+C AG +  A+  F  ME K   P+ +TY TLI     
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 308 EGDFDTCLSLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAI 367
               D    L   M  +GLE    SY++VI GLC++G+  E   VL +MN++    +   
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 368 YTALIDSYSKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCR 427
           Y  LI  Y K G+  +A+ +   M   GL P  +TY+ +++ +CK+G +  AME+ D  R
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 428 NKGVGINAMFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKID 487
            +G+  N   Y +++DG  + G + EA  +  EM + G +     YNA+I+     GK++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 488 QALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALA 547
            A+ +   M+E+G    V +Y+ ++ G  + +  +EA+++   M++KGI P   ++ +L 
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 548 IGLCLCGKVARACKILDDLAPMGVIP-ETAFEDMINALCKARRVKEACKLADGIVDRGRE 607
            G C   +   AC + +++  +G+ P E  +  +INA C    +++A +L + +V++G  
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 608 IPGRIRTVLINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKRRVKFRTLIEN 658
                 +VLINGL K   +  A +L+   + + Y+   S+   V + TLIEN
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLL---LKLFYEE--SVPSDVTYHTLIEN 599

[Close]

BLAST of Carg19225 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 246.9 bits (629), Expect = 4.5e-65
Identity = 168/612 (27.45%), Postives = 291/612 (47.55%), Query Frame = 0


Query: 56  TNTLLPPPEWIEPFVDVSDVVSS--SQRPDPSPWVAQILNLLDGSSNMEANLDSFCQKFL 115
           T+  +P P     F  VS ++ +   +  D      ++L++L   S    +     +  +
Sbjct: 29  TDVTVPSPVTRRQFCSVSPLLRNLPEEESDSMSVPHRLLSIL---SKPNWHKSPSLKSMV 88

Query: 116 IKLSPNFVAFVLQSVELREVPEIAFRFFYWAGKQKKYVHKIECYVSLIELLT---FSADL 175
             +SP+ V+  L S++L   P+ A  F +W  +  +Y H +  Y SL+ LL    +   +
Sbjct: 89  SAISPSHVS-SLFSLDLD--PKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVV 148

Query: 176 VKIRLMF---CELKGRGLL-------------------MTLSAANSLIKSFGNHGLVEEL 235
            KIRL+    C+  G  L                    + +   N+L+ S    GLV+E+
Sbjct: 149 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 208

Query: 236 LWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAER-VFEVMDGGKIVPDTVTYNVMIK 295
             V+  M E+ + P++YTYN +VNG      +E A + V ++++ G + PD  TY  +I 
Sbjct: 209 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG-LDPDFFTYTSLIM 268

Query: 296 GYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCLSLYLEMEERGLEI 355
           GYC+   +  A + F  M +K    +++ Y  LI         D  + L+++M++     
Sbjct: 269 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 328

Query: 356 PSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAIYTALIDSYSKSGSMGEAMRLF 415
              +Y+++I  LC   +  EA  ++++M +   + N+  YT LIDS        +A  L 
Sbjct: 329 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 388

Query: 416 KRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINAMFYASMIDGLGKA 475
            +M  +GL P+ +TY+ ++NG CK G +E+A++  +   ++ +  N   Y  +I G  K+
Sbjct: 389 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 448

Query: 476 GRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKIDQALTLFGRMEEEGCDQTVYTY 535
             + +A  +  +M E+    D   YN++ID   + G  D A  L   M + G     +TY
Sbjct: 449 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 508

Query: 536 TILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAP 595
           T +ID L K  R EEA  L+D++  KG+ P V  + AL  G C  GKV  A  +L+ +  
Sbjct: 509 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLS 568

Query: 596 MGVIPET-AFEDMINALCKARRVKEACKLADGIVDRGREIPGRIRTVLINGLRKAGNSDL 639
              +P +  F  +I+ LC   ++KEA  L + +V  G +      T+LI+ L K G+ D 
Sbjct: 569 KNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDH 628

[Close]

BLAST of Carg19225 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 6.1e-62
Identity = 140/454 (30.84%), Postives = 221/454 (48.68%), Query Frame = 0


Query: 195 LIKSFGNHGLVEELLWVWRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMDGGK 254
           LIK F     + + + V   +++ G +P ++ YN L+NG      I+ A RV + M    
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 189

Query: 255 IVPDTVTYNVMIKGYCKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCL 314
             PDTVTYN+MI   C  GK+  A++    +   N  P  ITY  LI+A   EG  D  L
Sbjct: 190 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 249

Query: 315 SLYLEMEERGLEIPSHSYSLVIGGLCKQGKCMEAYAVLEKMNQKDCRANVAIYTALIDSY 374
            L  EM  RGL+    +Y+ +I G+CK+G    A+ ++  +  K C  +V  Y  L+ + 
Sbjct: 250 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 309

Query: 375 SKSGSMGEAMRLFKRMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINA 434
              G   E  +L  +M +E  +P+ VTYS+++  LC+ G++EEAM      + KG+  +A
Sbjct: 310 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 369

Query: 435 MFYASMIDGLGKAGRIVEAENLFEEMFEKGCARDSYCYNAIIDALAKHGKIDQALTLFGR 494
             Y  +I    + GR+  A    E M   GC  D   YN ++  L K+GK DQAL +FG+
Sbjct: 370 YSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGK 429

Query: 495 MEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDKGITPTVASFRALAIGLCLCGK 554
           + E GC     +Y  +   L+       A+ +   M+  GI P   ++ ++   LC  G 
Sbjct: 430 LGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGM 489

Query: 555 VARACKILDDLAPMGVIPE-TAFEDMINALCKARRVKEACKLADGIVDRGREIPGRIRTV 614
           V  A ++L D+      P    +  ++   CKA R+++A  + + +V  G        TV
Sbjct: 490 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 549

Query: 615 LINGLRKAGNSDLAIKLMHSKIGIGYDRMGSIKR 648
           LI G+  AG    A++L +  + I      S KR
Sbjct: 550 LIEGIGFAGYRAEAMELANDLVRIDAISEYSFKR 582

[Close]

BLAST of Carg19225 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 235.3 bits (599), Expect = 1.4e-61
Identity = 164/581 (28.23%), Postives = 272/581 (46.82%), Query Frame = 0


Query: 92  LNLLDGSSNMEANLDSFCQKFLIKLSPNFVAFVLQSVELREVPEIAFRFFYWAGKQKKYV 151
           LNL   SS +     SF       LS   V  +L S+  +     A R F  A K+  + 
Sbjct: 27  LNLTPPSSTI-----SFASPHSAALSSTDVK-LLDSLRSQPDDSAALRLFNLASKKPNFS 86

Query: 152 HKIECYVSLIELLTFSADLVKIRLMFCELKGRGLLMTLSAANSLIKSFGNHGLVEELLWV 211
            +   Y  ++  L  S     ++ +  ++K     M  S    LI+S+    L +E+L V
Sbjct: 87  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 146

Query: 212 --WRRMKENGIEPSLYTYNFLVNGLVNSMFIESAERVFEVMDGGKIVPDTVTYNVMIKGY 271
             W  + E G++P  + YN ++N LV+   ++  E     M    I PD  T+NV+IK  
Sbjct: 147 VDW-MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 206

Query: 272 CKAGKMHKAMEKFRAMEMKNVNPDKITYMTLIQACYSEGDFDTCLSLYLEMEERGLEIPS 331
           C+A ++  A+     M    + PD+ T+ T++Q    EGD D  L +  +M E G    +
Sbjct: 207 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 266

Query: 332 HSYSLVIGGLCKQGKCMEAYAVLEKM-NQKDCRANVAIYTALIDSYSKSGSMGEAMRLFK 391
            S ++++ G CK+G+  +A   +++M NQ     +   +  L++   K+G +  A+ +  
Sbjct: 267 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 326

Query: 392 RMKNEGLEPDAVTYSVVVNGLCKSGRLEEAMEYFDFCRNKGVGINAMFYASMIDGLGKAG 451
            M  EG +PD  TY+ V++GLCK G ++EA+E  D    +    N + Y ++I  L K  
Sbjct: 327 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 386

Query: 452 RIVEAE-----------------------------------NLFEEMFEKGCARDSYCYN 511
           ++ EA                                     LFEEM  KGC  D + YN
Sbjct: 387 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 446

Query: 512 AIIDALAKHGKIDQALTLFGRMEEEGCDQTVYTYTILIDGLFKEHRNEEAIKLWDTMIDK 571
            +ID+L   GK+D+AL +  +ME  GC ++V TY  LIDG  K ++  EA +++D M   
Sbjct: 447 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 506

Query: 572 GITPTVASFRALAIGLCLCGKVARACKILDDLAPMGVIPET-AFEDMINALCKARRVKEA 631
           G++    ++  L  GLC   +V  A +++D +   G  P+   +  ++   C+   +K+A
Sbjct: 507 GVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 566

Query: 632 CKLADGIVDRGREIPGRIRTVLINGLRKAGNSDLAIKLMHS 634
             +   +   G E        LI+GL KAG  ++A KL+ S
Sbjct: 567 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600

The following BLAST results are available for this feature:

BLAST of Carg19225 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011962.1	0.0e+00	100.00	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6572351.1	0.0e+00	99.85	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022953016.1	0.0e+00	98.78	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita ...	[more]
XP_023554431.1	0.0e+00	98.33	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita ...	[more]
XP_022969029.1	0.0e+00	97.87	pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Cucurbita ...	[more]

BLAST of Carg19225 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LR67	3.1e-260	66.06	Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidop...	[more]
Q9FIX3	3.7e-64	29.87	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LSL9	6.4e-64	27.45	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9SR00	8.6e-61	30.84	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9LFF1	1.9e-60	28.23	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]

BLAST of Carg19225 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GLU6	0.0e+00	98.78	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbit...	[more]
A0A6J1I1D4	0.0e+00	97.87	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucurbit...	[more]
A0A0A0K5P5	0.0e+00	89.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047320 PE=4 SV=1	[more]
A0A6J1D2R3	0.0e+00	88.89	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Momordic...	[more]
A0A1S3C0U2	0.0e+00	88.43	pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Cucumis ...	[more]

BLAST of Carg19225 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03560.1	2.2e-261	66.06	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	2.6e-65	29.87	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	4.5e-65	27.45	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04760.1	6.1e-62	30.84	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G53700.1	1.4e-61	28.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 505..538 e-value: 3.5E-7 score: 28.0 coord: 330..363 e-value: 1.2E-4 score: 20.0 coord: 295..326 e-value: 7.7E-6 score: 23.8 coord: 366..399 e-value: 1.1E-9 score: 35.8 coord: 225..259 e-value: 8.0E-4 score: 17.4 coord: 470..500 e-value: 7.2E-9 score: 33.3 coord: 400..423 e-value: 6.2E-6 score: 24.1 coord: 260..293 e-value: 3.8E-9 score: 34.2 coord: 437..468 e-value: 2.9E-8 score: 31.4 coord: 193..223 e-value: 5.5E-5 score: 21.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 579..600 e-value: 0.15 score: 12.4 coord: 331..360 e-value: 9.8E-5 score: 22.4 coord: 437..465 e-value: 3.0E-7 score: 30.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 363..411 e-value: 7.0E-17 score: 61.4 coord: 192..235 e-value: 2.4E-9 score: 37.2 coord: 468..516 e-value: 2.9E-14 score: 53.0 coord: 257..304 e-value: 3.4E-15 score: 56.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 398..432 score: 11.728648
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 468..502 score: 12.364404
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 363..397 score: 13.383805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 293..327 score: 10.720209
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 503..537 score: 12.013642
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 188..222 score: 10.950397
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 328..362 score: 9.777537
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 258..292 score: 13.537263
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 223..257 score: 9.262356
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 433..467 score: 11.586152
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 358..426 e-value: 1.7E-23 score: 85.1 coord: 285..357 e-value: 8.7E-18 score: 66.5 coord: 240..284 e-value: 7.7E-12 score: 47.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 427..517 e-value: 9.4E-28 score: 98.8 coord: 88..239 e-value: 1.5E-20 score: 75.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 518..647 e-value: 2.4E-18 score: 68.7
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 43..656
None	No IPR available	PANTHER	PTHR47934:SF12	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 43..656
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 302..536

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19225-RA	Carg19225-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding