Carg19196 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19196
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Xyloglucan endotransglucosylase/hydrolase
Location	Carg_Chr19: 8314252 .. 8316307 (+)
RNA-Seq Expression	Carg19196
Synteny	Carg19196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAACTCTCTTTTTTATTTGAATTCCACCTCGGAAATGACGTGGAACTGTAAATTTAATGATGTGAGTAAGGTCGCTCCGCACTGGAAATGGCTATAAAAACATCTCTTTCTGACAAGTTTACTTGAACATCCACACTGTGAACTCTTCCCTTCACTCTGTTTATACCTCTCTAGCTCCCATGGCTTCTTCTGTGTTCTTGGGACTATGGGTTTCTCTTCTAATGCTTGGTTTTGCTTCTTCTGCTAAGTTCGATGAGCTTTTTCAGCCGAGTTGGGCTTTTGATCACTTCAATTACGAAGGAGATGTCCTCGAACTTAAACTTGACAATTACTCTGGTAAAAACCCATCCCATTTTTATGGCACTTTTCCTCATTCTGTCTACAATGCTTAATTTTGAAGTCGATTTCAGGAGCTGGGTTTTCATCCAAATCCAAGTACATGTTTGGCAAAGTGACCATTCAAATCAAGCTTGTAGCTGGAGACTCTGCAGGAACTGTGACAGCATTTTATGTAAGTAAAAAAACATAAACTTAATCAAATGAATGTTACATTGAAATGAAAACTTGTAGGGTTCTTATCTTGTTTTTCTGATGTAGATGTCATCGGACGGTCCGAATCACAATGAGTTTGATTTTGAGTTTCTGGGCAACACAAGTGGAGAGCCATATACTGTACAGACCAACATTTATGTGAATGGTGTGGGAAATAGAGAGCAAAGATTGAAACTTTGGTTCGACCCAACTACAGATTTTCATTCCTACTCCATTTTTTGGAATCGCCGTCAAGTCATGTAAGCAACTCCTCCTTCACTCCATTTACATTATTAGCTGAGTTTTTATTTCAAGCCACTGTTTTCATATATATATGTATGTATGTATGTATTGTACTAAAAATGGGCATTGTAATGTAGATTTGACCCATCGGGAGAGTAGATATTGAATGAAATTTATAGAACAGAATAGATTTGTTTTAGAACAGGACATTACATGTGGAAGAAATGAATCCAAGCTTTCATTAGAAAATGAGAAATAATTCAACCAGGAACATTCTTCATGTATTAGAATACCCATTTCGAGAATTATTATAAAAAAAAATGGCCATGTTTTTTCCATAGTTTAAATACTAAACCAAACCTTGGAAAGGTTTGAAATTCAAAAACAAAAATGGAATAGACTCCAAATATTAGAAACCCACAAGATTTTAGCCTTTATGTGAATCAGTGCCCGTTAATGCGTGGCTCTGTACGAGCAGCTACCCGATCGGTGTCAATGGGCCAATGGCTCTGACAAAGCCATTGAGCCCTTCCAAACAAGGCACCACAATATTCCTCTTGGCCCCCCTTTCTGATCACATGCATGTGCCATCAATTTGGCCCCATTTCAATTCATGAATTATTAAAACATTACTATTCTTTCAAAATGTTGTTTCTCTTGAATTTTGATATTTATTTATTTATTTAAGATTTGAAGCTTTGATATTTTTAATTAAGAATGAGTTGATGACTGTCACGACTCTAACATTCGAGAGTGGTATAATATTGTCTAGTTTAACTCTTATAGTTATTGTCGGACTCTCTCCCAACAATTCTTGTTCCATAAAAATTTCTTCTTGTTCGGGTAGATTTCTCGTGGACGAAACCCCAGTTCGAGCCCACACGAATATGGAAGACAAGGGTGTGCCATTTCCTCGAGACCAATCCATGGGAGTTTACAGCTCTATTTGGAACGCAGACGATTGGGCCACACAGGGCGGCCGAGTCAAGACCGATTGGTCCCACTCCCCCTTTATTGCCTCTTATAAGGGCTTCCAAATCGACGCCTGCGAGTGCTCCTCCGCCACCGGAGCCACTGCCAACGCCACCTGTTGTAGCGGTAGCGGTATCGGCGACAACGGCAAGAAGTTCTGGTGGGACGAGCCAGTGCTTTCAGAGTTGAATGTACATCAAAGCCATCAGTTGCTCTGGGTTCGGGCCAACCATATGATTTACGATTACTGTACTGATACTGCTAGATTTGCAGTTACGCCTGTTGAATGTATTCACCACCGCCACTAG

mRNA sequence

AGAAACTCTCTTTTTTATTTGAATTCCACCTCGGAAATGACGTGGAACTGTAAATTTAATGATGTGAGTAAGGTCGCTCCGCACTGGAAATGGCTATAAAAACATCTCTTTCTGACAAGTTTACTTGAACATCCACACTGTGAACTCTTCCCTTCACTCTGTTTATACCTCTCTAGCTCCCATGGCTTCTTCTGTGTTCTTGGGACTATGGGTTTCTCTTCTAATGCTTGGTTTTGCTTCTTCTGCTAAGTTCGATGAGCTTTTTCAGCCGAGTTGGGCTTTTGATCACTTCAATTACGAAGGAGATGTCCTCGAACTTAAACTTGACAATTACTCTGTTATTGTCGGACTCTCTCCCAACAATTCTTGTTCCATAAAAATTTCTTCTTGTTCGGGTAGATTTCTCGTGGACGAAACCCCAGTTCGAGCCCACACGAATATGGAAGACAAGGGTGTGCCATTTCCTCGAGACCAATCCATGGGAGTTTACAGCTCTATTTGGAACGCAGACGATTGGGCCACACAGGGCGGCCGAGTCAAGACCGATTGGTCCCACTCCCCCTTTATTGCCTCTTATAAGGGCTTCCAAATCGACGCCTGCGAGTGCTCCTCCGCCACCGGAGCCACTGCCAACGCCACCTGTTGTAGCGGTAGCGGTATCGGCGACAACGGCAAGAAGTTCTGGTGGGACGAGCCAGTGCTTTCAGAGTTGAATGTACATCAAAGCCATCAGTTGCTCTGGGTTCGGGCCAACCATATGATTTACGATTACTGTACTGATACTGCTAGATTTGCAGTTACGCCTGTTGAATGTATTCACCACCGCCACTAG

Coding sequence (CDS)

ATGGCTTCTTCTGTGTTCTTGGGACTATGGGTTTCTCTTCTAATGCTTGGTTTTGCTTCTTCTGCTAAGTTCGATGAGCTTTTTCAGCCGAGTTGGGCTTTTGATCACTTCAATTACGAAGGAGATGTCCTCGAACTTAAACTTGACAATTACTCTGTTATTGTCGGACTCTCTCCCAACAATTCTTGTTCCATAAAAATTTCTTCTTGTTCGGGTAGATTTCTCGTGGACGAAACCCCAGTTCGAGCCCACACGAATATGGAAGACAAGGGTGTGCCATTTCCTCGAGACCAATCCATGGGAGTTTACAGCTCTATTTGGAACGCAGACGATTGGGCCACACAGGGCGGCCGAGTCAAGACCGATTGGTCCCACTCCCCCTTTATTGCCTCTTATAAGGGCTTCCAAATCGACGCCTGCGAGTGCTCCTCCGCCACCGGAGCCACTGCCAACGCCACCTGTTGTAGCGGTAGCGGTATCGGCGACAACGGCAAGAAGTTCTGGTGGGACGAGCCAGTGCTTTCAGAGTTGAATGTACATCAAAGCCATCAGTTGCTCTGGGTTCGGGCCAACCATATGATTTACGATTACTGTACTGATACTGCTAGATTTGCAGTTACGCCTGTTGAATGTATTCACCACCGCCACTAG

Protein sequence

MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSVIVGLSPNNSCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHMIYDYCTDTARFAVTPVECIHHRH

Homology

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BLAST of Carg19196 vs. NCBI nr
Match: KAG7011934.1 (Xyloglucan endotransglucosylase/hydrolase protein 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 460.3 bits (1183), Expect = 9.2e-126
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSVIVGLSPN 60
           MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSVIVGLSPN
Sbjct: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSVIVGLSPN 60

Query: 61  NSCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVK 120
           NSCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVK
Sbjct: 61  NSCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVK 120

Query: 121 TDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVH 180
           TDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVH
Sbjct: 121 TDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVH 180

Query: 181 QSHQLLWVRANHMIYDYCTDTARFAVTPVECIHHRH 217
           QSHQLLWVRANHMIYDYCTDTARFAVTPVECIHHRH
Sbjct: 181 QSHQLLWVRANHMIYDYCTDTARFAVTPVECIHHRH 216

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BLAST of Carg19196 vs. NCBI nr
Match: XP_022953118.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita moschata])

HSP 1 Score: 383.3 bits (983), Expect = 1.4e-102
Identity = 200/294 (68.03%), Postives = 207/294 (70.41%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS        
Sbjct: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  TYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAH NMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHMNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 217
           YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 240

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BLAST of Carg19196 vs. NCBI nr
Match: XP_023554560.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380.6 bits (976), Expect = 9.2e-102
Identity = 198/294 (67.35%), Postives = 207/294 (70.41%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSVFLGLWVSLL+LGFASSAKFDELFQPSWAFDHFNYEGDVL+LKLDNYS        
Sbjct: 1   MASSVFLGLWVSLLILGFASSAKFDELFQPSWAFDHFNYEGDVLDLKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  KYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAHTNMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHTNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 217
           YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSG GD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGSGD 240

[Close]

BLAST of Carg19196 vs. NCBI nr
Match: KAG6572322.1 (Xyloglucan endotransglucosylase/hydrolase protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 3.5e-101
Identity = 199/294 (67.69%), Postives = 206/294 (70.07%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSVFLGL VSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS        
Sbjct: 1   MASSVFLGLRVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  KYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAHTNMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHTNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 217
           YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGAT NATCCSGSGIGD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATGNATCCSGSGIGD 240

[Close]

BLAST of Carg19196 vs. NCBI nr
Match: XP_022969196.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 2.8e-98
Identity = 194/293 (66.21%), Postives = 202/293 (68.94%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSV  GLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS        
Sbjct: 1   MASSVCFGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  KYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAH NMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHKNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 216
           YSSIWNADDWATQGGRVKTDW HSPFIASYKGFQI+ACECSSATGATANATCCSGSG GD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWFHSPFIASYKGFQINACECSSATGATANATCCSGSGSGD 240

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BLAST of Carg19196 vs. ExPASy Swiss-Prot
Match: Q8LDW9 (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana OX=3702 GN=XTH9 PE=2 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 5.9e-59
Identity = 125/275 (45.45%), Postives = 153/275 (55.64%), Query Frame = 0


Query: 20  SSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS--------------------VIVGLS- 79
           S AKFDEL++ SWA DH   EG+V +LKLDNYS                    ++ G S 
Sbjct: 25  SGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSA 84

Query: 80  ------------PN---------------------------------------------N 139
                       PN                                             +
Sbjct: 85  GTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFH 144

Query: 140 SCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKT 199
           + SI  S  S  F+VDETP+R   N+E+KG+PF +DQ+MGVYSSIWNADDWATQGG VKT
Sbjct: 145 TYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKT 204

Query: 200 DWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQ 217
           DWSH+PF+ASYK FQIDACE  +    T + + C+G       +KFWWDEP +SEL++HQ
Sbjct: 205 DWSHAPFVASYKEFQIDACEIPT----TTDLSKCNGD------QKFWWDEPTVSELSLHQ 264

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BLAST of Carg19196 vs. ExPASy Swiss-Prot
Match: Q41542 (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 GN=XTH PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.1e-36
Identity = 70/142 (49.30%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD+TP+R   N +D GV +P DQ M +YSS+WNADDWAT+GGR KTDWS +PF+ASY+
Sbjct: 162 FFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYR 221

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF +D CE      A+A A  C+  G        WWD+P   +L+  Q  +L WVR  H 
Sbjct: 222 GFHVDGCE------ASAEAKFCATQGAR------WWDQPEFQDLDAAQYRRLAWVRKEHT 281

Query: 194 IYDYCTDTARFAVTPVECIHHR 216
           IY+YCTD  R+A    EC   R
Sbjct: 282 IYNYCTDHDRYAAMAPECKRDR 291

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BLAST of Carg19196 vs. ExPASy Swiss-Prot
Match: Q39857 (Xyloglucan endotransglucosylase/hydrolase 1 OS=Glycine max OX=3847 GN=XTH1 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 1.6e-35
Identity = 72/143 (50.35%), Postives = 90/143 (62.94%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VDE P+R   N +D GV FP DQ M +Y+S+WNADDWAT+GG  KTDWS +PFIA+YK
Sbjct: 164 FFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYK 223

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF ID CE      A+ NA  C   G      K WWD+P   +L+  Q  +L WVR  + 
Sbjct: 224 GFHIDGCE------ASVNAKFCDTQG------KRWWDQPEFRDLDAAQWRRLRWVRQKYT 283

Query: 194 IYDYCTDTARFA-VTPVECIHHR 216
           IY+YCTDT R+  ++P EC   R
Sbjct: 284 IYNYCTDTKRYPHISPPECKRDR 294

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BLAST of Carg19196 vs. ExPASy Swiss-Prot
Match: Q41638 (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis OX=3914 GN=XTHA PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-35
Identity = 70/142 (49.30%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD+ P+R   N  D GV FP +Q M +Y+S+WNADDWAT+GG  KTDWS +PFIASYK
Sbjct: 161 FYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYK 220

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF ID CE      A+ NA  C   G      K WWD+P   +L+  Q  +L WVR  + 
Sbjct: 221 GFHIDGCE------ASVNAKFCDTQG------KRWWDQPEFRDLDAAQWQKLAWVRNKYT 280

Query: 194 IYDYCTDTARFAVTPVECIHHR 216
           IY+YCTD  R++  P EC   R
Sbjct: 281 IYNYCTDRKRYSQVPPECTRDR 290

[Close]

BLAST of Carg19196 vs. ExPASy Swiss-Prot
Match: Q9XIW1 (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana OX=3702 GN=XTH5 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-34
Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD+ P+R   N +D GV FP +Q M +YSS+WNADDWAT+GG  KT+W  +PF+ASY+
Sbjct: 162 FFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYR 221

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF +D CE      A+ NA  C   G      K WWD+    +L+ +Q  +L WVR  + 
Sbjct: 222 GFHVDGCE------ASVNAKFCETQG------KRWWDQKEFQDLDANQYKRLKWVRKRYT 281

Query: 194 IYDYCTDTARFAVTPVECIHHR 216
           IY+YCTD  RF V P EC   R
Sbjct: 282 IYNYCTDRVRFPVPPPECRRDR 291

[Close]

BLAST of Carg19196 vs. ExPASy TrEMBL
Match: A0A6J1GMH6 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111455617 PE=3 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.9e-103
Identity = 200/294 (68.03%), Postives = 207/294 (70.41%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS        
Sbjct: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  TYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAH NMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHMNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 217
           YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 240

[Close]

BLAST of Carg19196 vs. ExPASy TrEMBL
Match: A0A6J1HX30 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111468264 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98
Identity = 194/293 (66.21%), Postives = 202/293 (68.94%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS-------- 60
           MASSV  GLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS        
Sbjct: 1   MASSVCFGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSGAGFSSKS 60

Query: 61  ------------VIVGLS-------------PNNS------------------CSIKISS 120
                       ++ G S             PN++                   +I ++ 
Sbjct: 61  KYMFGKVTIQIKLVAGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTSGEPYTVQTNIYVNG 120

Query: 121 CSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQSMGV 180
              R                           FLVDETPVRAH NMEDKGVPFPRDQSMGV
Sbjct: 121 VGNREQRLKLWFDPTTDFHSYSIFWNRRQVIFLVDETPVRAHKNMEDKGVPFPRDQSMGV 180

Query: 181 YSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGD 216
           YSSIWNADDWATQGGRVKTDW HSPFIASYKGFQI+ACECSSATGATANATCCSGSG GD
Sbjct: 181 YSSIWNADDWATQGGRVKTDWFHSPFIASYKGFQINACECSSATGATANATCCSGSGSGD 240

[Close]

BLAST of Carg19196 vs. ExPASy TrEMBL
Match: N0DX47 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth17 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.2e-84
Identity = 174/299 (58.19%), Postives = 192/299 (64.21%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGF----ASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS---- 60
           MASS+ L L VS+L+LGF    +SS+KFD+LFQPSWA DHFNY GD L+LKLDNYS    
Sbjct: 1   MASSLLLPLSVSILLLGFVSSSSSSSKFDDLFQPSWALDHFNYNGDTLQLKLDNYSGAGF 60

Query: 61  ----------------VIVGLS-------------PNNS------------------CSI 120
                           +I G S             PN++                   +I
Sbjct: 61  SSKSKYMFGKVTIQIKLIAGDSAGTVTAYYMSSDGPNHNEFDFEFLGNTTGEPYTVQTNI 120

Query: 121 KISSCSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQ 180
            ++    R                           FLVDETPVR HTNMEDKGVPFP DQ
Sbjct: 121 YVNGVGNREQRLKLWFDPTQDFHSYSIFWNRRQVIFLVDETPVRVHTNMEDKGVPFPGDQ 180

Query: 181 SMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSATGATANAT-CCSG 217
           SMGVYSSIWNADDWATQGGRVKTDWSHSPF+ASYKGF+I+ACEC SATG  AN T CC+G
Sbjct: 181 SMGVYSSIWNADDWATQGGRVKTDWSHSPFVASYKGFEINACECPSATGGVANNTPCCNG 240

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BLAST of Carg19196 vs. ExPASy TrEMBL
Match: A0A5C7HFX0 (Xyloglucan:xyloglucosyl transferase OS=Acer yangbiense OX=1000413 GN=EZV62_020558 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.4e-81
Identity = 143/213 (67.14%), Postives = 165/213 (77.46%), Query Frame = 0


Query: 4   SVFLGLWVSLLMLGFASSAKFDELFQPSWAFDHFNYEGDVLELKLDNYSVIVGLSPNNSC 63
           SV LG  + L+M+G ASSAKFDELFQ SWA DHF YEG+ L+LKLDNYS ++        
Sbjct: 5   SVLLGFLLGLVMVGLASSAKFDELFQASWALDHFAYEGETLKLKLDNYSDMI-------- 64

Query: 64  SIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDW 123
                    +FLVDETP+R HTN+E KG+PFPRDQ+MGVYSSIWNADDWATQGGRVKTDW
Sbjct: 65  ---------KFLVDETPIRVHTNLEHKGIPFPRDQAMGVYSSIWNADDWATQGGRVKTDW 124

Query: 124 SHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSH 183
           SH+PF+ASY+ F IDACEC  +  A  NA  CS S    N K+FWWDEP ++ELN+HQSH
Sbjct: 125 SHAPFVASYRNFDIDACECPVSVAAVDNAKKCSSS----NEKRFWWDEPTVAELNLHQSH 184

Query: 184 QLLWVRANHMIYDYCTDTARFAVTPVECIHHRH 217
           QLLWVRANHMIYDYCTDT RF VTP+EC+HHRH
Sbjct: 185 QLLWVRANHMIYDYCTDTTRFPVTPLECVHHRH 196

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BLAST of Carg19196 vs. ExPASy TrEMBL
Match: A0A5A7SLK7 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G003880 PE=3 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 7.4e-81
Identity = 167/300 (55.67%), Postives = 182/300 (60.67%), Query Frame = 0


Query: 1   MASSVFLGLWVSLLMLGFA---SSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS----- 60
           MASS+ L L +SLL+L FA   SS+KFD+LFQPSWA DHFNY GD L+LKLDNYS     
Sbjct: 1   MASSLLLPLSLSLLLLAFASSSSSSKFDDLFQPSWALDHFNYNGDTLQLKLDNYSGAGFS 60

Query: 61  ---------------VIVGLSPNN-------------------------------SCSIK 120
                          +I G S                                    +I 
Sbjct: 61  SKSKYMFGKVTIQIKLIAGDSAGTVTAYYMSSDGPSHNEFDFEFLGNTTGEPYTVQTNIY 120

Query: 121 ISSCSGR---------------------------FLVDETPVRAHTNMEDKGVPFPRDQS 180
           ++    R                           FLVDETPVR HTNMEDKGVPFP DQS
Sbjct: 121 VNGVGNREQRLKLWFDPTQDFHSYSIFWNRRQVIFLVDETPVRVHTNMEDKGVPFPGDQS 180

Query: 181 MGVYSSIWNADDWATQGGRVKTDWSHSPFIASYKGFQIDACECSSA---TGATANATCCS 217
           MGVYSSIWNADDWATQGGRVKTDWSHSPF+ASYKGF+IDACEC S+    G  AN T C 
Sbjct: 181 MGVYSSIWNADDWATQGGRVKTDWSHSPFVASYKGFEIDACECPSSYATGGGVANNTACC 240

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BLAST of Carg19196 vs. TAIR 10
Match: AT4G03210.1 (xyloglucan endotransglucosylase/hydrolase 9 )

HSP 1 Score: 228.8 bits (582), Expect = 4.2e-60
Identity = 125/275 (45.45%), Postives = 153/275 (55.64%), Query Frame = 0


Query: 20  SSAKFDELFQPSWAFDHFNYEGDVLELKLDNYS--------------------VIVGLS- 79
           S AKFDEL++ SWA DH   EG+V +LKLDNYS                    ++ G S 
Sbjct: 25  SGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSA 84

Query: 80  ------------PN---------------------------------------------N 139
                       PN                                             +
Sbjct: 85  GTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFH 144

Query: 140 SCSIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKT 199
           + SI  S  S  F+VDETP+R   N+E+KG+PF +DQ+MGVYSSIWNADDWATQGG VKT
Sbjct: 145 TYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKT 204

Query: 200 DWSHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQ 217
           DWSH+PF+ASYK FQIDACE  +    T + + C+G       +KFWWDEP +SEL++HQ
Sbjct: 205 DWSHAPFVASYKEFQIDACEIPT----TTDLSKCNGD------QKFWWDEPTVSELSLHQ 264

[Close]

BLAST of Carg19196 vs. TAIR 10
Match: AT4G03210.2 (xyloglucan endotransglucosylase/hydrolase 9 )

HSP 1 Score: 218.4 bits (555), Expect = 5.7e-57
Identity = 99/153 (64.71%), Postives = 119/153 (77.78%), Query Frame = 0


Query: 64  SIKISSCSGRFLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDW 123
           SI  S  S  F+VDETP+R   N+E+KG+PF +DQ+MGVYSSIWNADDWATQGG VKTDW
Sbjct: 119 SILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDW 178

Query: 124 SHSPFIASYKGFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSH 183
           SH+PF+ASYK FQIDACE  +    T + + C+G       +KFWWDEP +SEL++HQ+H
Sbjct: 179 SHAPFVASYKEFQIDACEIPT----TTDLSKCNGD------QKFWWDEPTVSELSLHQNH 238

Query: 184 QLLWVRANHMIYDYCTDTARFAVTPVECIHHRH 217
           QL+WVRANHMIYDYC D  RF VTP+EC HHRH
Sbjct: 239 QLIWVRANHMIYDYCFDATRFPVTPLECQHHRH 261

[Close]

BLAST of Carg19196 vs. TAIR 10
Match: AT5G13870.1 (xyloglucan endotransglucosylase/hydrolase 5 )

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-35
Identity = 67/142 (47.18%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD+ P+R   N +D GV FP +Q M +YSS+WNADDWAT+GG  KT+W  +PF+ASY+
Sbjct: 162 FFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYR 221

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF +D CE      A+ NA  C   G      K WWD+    +L+ +Q  +L WVR  + 
Sbjct: 222 GFHVDGCE------ASVNAKFCETQG------KRWWDQKEFQDLDANQYKRLKWVRKRYT 281

Query: 194 IYDYCTDTARFAVTPVECIHHR 216
           IY+YCTD  RF V P EC   R
Sbjct: 282 IYNYCTDRVRFPVPPPECRRDR 291

[Close]

BLAST of Carg19196 vs. TAIR 10
Match: AT2G06850.1 (xyloglucan endotransglucosylase/hydrolase 4 )

HSP 1 Score: 142.5 bits (358), Expect = 3.9e-34
Identity = 66/142 (46.48%), Postives = 86/142 (60.56%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD  P+R   N +D GV FP +Q M +YSS+WNADDWAT+GG  KT+W+++PF+ASYK
Sbjct: 165 FFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYK 224

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
           GF ID C+      A+  A  C+  G      + WWD+    +L+  Q  +L WVR    
Sbjct: 225 GFHIDGCQ------ASVEAKYCATQG------RMWWDQKEFRDLDAEQWRRLKWVRMKWT 284

Query: 194 IYDYCTDTARFAVTPVECIHHR 216
           IY+YCTD  RF V P EC   R
Sbjct: 285 IYNYCTDRTRFPVMPAECKRDR 294

[Close]

BLAST of Carg19196 vs. TAIR 10
Match: AT4G37800.1 (xyloglucan endotransglucosylase/hydrolase 7 )

HSP 1 Score: 135.2 bits (339), Expect = 6.3e-32
Identity = 61/138 (44.20%), Postives = 79/138 (57.25%), Query Frame = 0


Query: 74  FLVDETPVRAHTNMEDKGVPFPRDQSMGVYSSIWNADDWATQGGRVKTDWSHSPFIASYK 133
           F VD  P+R + N E + VP+PR Q MGVYS++W ADDWAT+GG  K +WS +PF A YK
Sbjct: 165 FYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYK 224

Query: 134 GFQIDACECSSATGATANATCCSGSGIGDNGKKFWWDEPVLSELNVHQSHQLLWVRANHM 193
            F I+ C         AN+             K WW+     +L+  ++    WVR NHM
Sbjct: 225 DFDIEGCPVPGPADCPANS-------------KNWWEGSAYHQLSPVEARSYRWVRVNHM 284

Query: 194 IYDYCTDTARFAVTPVEC 212
           +YDYCTD +RF V P EC
Sbjct: 285 VYDYCTDKSRFPVPPPEC 289

The following BLAST results are available for this feature:

BLAST of Carg19196 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011934.1	9.2e-126	100.00	Xyloglucan endotransglucosylase/hydrolase protein 9 [Cucurbita argyrosperma subs...	[more]
XP_022953118.1	1.4e-102	68.03	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita moschata]	[more]
XP_023554560.1	9.2e-102	67.35	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita pepo subsp. ...	[more]
KAG6572322.1	3.5e-101	67.69	Xyloglucan endotransglucosylase/hydrolase protein 9, partial [Cucurbita argyrosp...	[more]
XP_022969196.1	2.8e-98	66.21	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita maxima]	[more]

BLAST of Carg19196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDW9	5.9e-59	45.45	Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q41542	9.1e-36	49.30	Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 ...	[more]
Q39857	1.6e-35	50.35	Xyloglucan endotransglucosylase/hydrolase 1 OS=Glycine max OX=3847 GN=XTH1 PE=2 ...	[more]
Q41638	5.9e-35	49.30	Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis OX=39...	[more]
Q9XIW1	2.9e-34	47.18	Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thal...	[more]

BLAST of Carg19196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMH6	6.9e-103	68.03	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HX30	1.3e-98	66.21	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
N0DX47	3.2e-84	58.19	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth17 PE...	[more]
A0A5C7HFX0	7.4e-81	67.14	Xyloglucan:xyloglucosyl transferase OS=Acer yangbiense OX=1000413 GN=EZV62_02055...	[more]
A0A5A7SLK7	7.4e-81	55.67	Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Carg19196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03210.1	4.2e-60	45.45	xyloglucan endotransglucosylase/hydrolase 9	[more]
AT4G03210.2	5.7e-57	64.71	xyloglucan endotransglucosylase/hydrolase 9	[more]
AT5G13870.1	2.1e-35	47.18	xyloglucan endotransglucosylase/hydrolase 5	[more]
AT2G06850.1	3.9e-34	46.48	xyloglucan endotransglucosylase/hydrolase 4	[more]
AT4G37800.1	6.3e-32	44.20	xyloglucan endotransglucosylase/hydrolase 7	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 73..124 e-value: 1.5E-11 score: 44.1
None	No IPR available	GENE3D	2.60.120.200		coord: 61..216 e-value: 8.1E-43 score: 148.7
None	No IPR available	PANTHER	PTHR31062:SF234	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 63..214
None	No IPR available	PANTHER	PTHR31062:SF234	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 19..53
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	PFAM	PF06955	XET_C	coord: 165..211 e-value: 6.5E-18 score: 64.3
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 19..53
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 63..214
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 73..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19196-RA	Carg19196-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0071554	cell wall organization or biogenesis
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity