Carg19175 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg19175
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sigma intracellular receptor 2-like
Location	Carg_Chr19: 8216947 .. 8218819 (+)
RNA-Seq Expression	Carg19175
Synteny	Carg19175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGGTATTCTTCTATTCCACCTCCTACCAATTTGGCTACTACTCAAATCTATTGTTTGATTGAATCAATACCCTTTTGCCTGCACATTGTGTTTCTGTTAATTGCACAATGGTTCTGTTGTGAGTTTAGTTTGTAATTGGCACCAAAAAACAAAATCCCATTTCTTGATGCTTGTTGTACTTAGTTTGGGGGTGTTGGATTCTGGATAGCCACATGGATTCTGGATAGCCACATGATGCAAGTTAATATCTGTGATTTGAGATTTCCTCTGCTAATTTTCATGTTGTTTTTCAGAATTTTGGCAAAACTTGTCAATTAATAGCTTGTACTTGATCATCTTAATTAGTGTTTTTAAAAGAAGCATTGAAGAAATTTCTTATCAGGCTGGAAACTGATTTCTTGTTCGATATAATGTGAGATCCCACGTTGGTTGAAGAAGGGAATGAAATATTCGTTATAAGAGTGTGAAAATCTCTTCTTAGTGGACGCATTTTGAACCCTTGAGGGGAAGTCCAGAAGGAATAGCCCAAAGAGAACAATATCTACTGGTAATAGGTTTGAACTATCACAAATGGTATCAAAGCTAGACACCGTGCGGTGTGCCAGCGAGGACGCTGGCTCCCAAGGGGGTGGATTGTGAGATCCCATATTGATTGGAGAAGGGAACAAAACTTTTCTTATAAGGGTGTGAAAACCTTTCCTTAATAATCACGTTTGACAACCTCGAGGGAAGTCCAGATGGATAATCCCGAAGAAGACAACAGTGGTGAGCTTGGGCCGTACCAAGTACATAAACTAAAACTAAGGCTTCAACTTTGAGGACTTTTAGGCAATCAGGCATTTAGATTAGTAGTGCATTTGGGATAAGGTTCAAACATCTTCCGAGTACTCTTTACATATTTCAAACACTTTGATATTCTGCTTGAATACATGTTGCAAAGGATTTGTTCTGCTTCATTTGTTAACCTAGCTGAAGAGATCCACTGGTTTCTGTTCCATTTCTTGTAGGGAAATGTTGCTTATTCTCTGTTTCTTCTGTAATTTCAGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCGAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAAAGAGCCATCCTACATCACCAAAAGAGACCCTTTTGAGCTGTATCACCTCATCTGCAACCGTTTTGCTTTAGTAGTAGCTGATGATGTTAGTTCTTTAGGTATTGATGCAGCTCTGTCTATGGATCATTCAGCATTTGCCTCTCTGATGTTCCATTAAGTCTTGATAATGGTTCAAAGCGACCCTTTTGAGTTTTGAATGAAAATAAGATACTAACTTGATTGAGTGTAGAGGAAAGCTGACCGAAATTGATCAAGACTGACTTGATCGAACGATTTGTTCGTTTTAGAATCGTGTTAAATCCTATTAATTAAAGTTATTGAATTATTG

mRNA sequence

ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCGAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAAAGAGCCATCCTACATCACCAAAAGAGACCCTTTTGAGCTGTATCACCTCATCTGCAACCGTTTTGCTTTAGTAGTAGCTGATGATGTTAGTTCTTTAGGTATTGATGCAGCTCTGTCTATGGATCATTCAGCATTTGCCTCTCTGATGTTCCATTAAGTCTTGATAATGGTTCAAAGCGACCCTTTTGAGTTTTGAATGAAAATAAGATACTAACTTGATTGAGTGTAGAGGAAAGCTGACCGAAATTGATCAAGACTGACTTGATCGAACGATTTGTTCGTTTTAGAATCGTGTTAAATCCTATTAATTAAAGTTATTGAATTATTG

Coding sequence (CDS)

ATGGGCGCTCTTCTCAAGCTCGTCGACGCACTACTGTTCCTCGCCTTTCTCCTTCTCGCTTTGGTATCGCCTCTCATCGATTTCCAGGTTATATTTCCTCGAACCCTTTTCCCTCATTTTCTGATCGATCTCAAGACCTGGTACATCCGCCAATCGGGGGACTATATAATGGCCGACTCCCCTCACTTCGTCGTTGGCCTCGTTTGGCTCGAGCTTCTCTTTCAATGGCCTCTCCTGCTTCTCAATCTCTACGCTTTGTTGGCTGCCAAGACATGGTACAACACCACTTGCTTGATATATGGCGTTTCTCTAGTGGCTTCCATGTCTGCCATATTGGGTGAAATGGTTGGATCGAACCGAGCATCTAATACTCTAATGACGATATACTACCCCTTCTTGGGTTTGGGAGTTTTGGCCATGCTACGTGGGCTCGTGGCGTGCTCGAGCAAGGCTACGATCACCGGCACCAAACCCTCAAATGGCAGGAAAAAGAGAGCTTAA

Protein sequence

MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADSPHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNRASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA

Homology

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BLAST of Carg19175 vs. NCBI nr
Match: KAG7011913.1 (Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.8 bits (808), Expect = 2.1e-82
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 166

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BLAST of Carg19175 vs. NCBI nr
Match: KAG6572300.1 (Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 314.3 bits (804), Expect = 6.2e-82
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSN+
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNQ 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 166

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BLAST of Carg19175 vs. NCBI nr
Match: XP_022952624.1 (sigma intracellular receptor 2-like [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGLVWLELLFQWPLLLLNLYA LAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. NCBI nr
Match: XP_022969277.1 (sigma intracellular receptor 2-like [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 1.0e-79
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFP+TLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVV LVWLELLFQWPLLLLNLYA LAAK WYNTTCLIYGVSLVASMSAILGEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. NCBI nr
Match: XP_038887415.1 (sigma intracellular receptor 2 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 9.4e-70
Identity = 142/166 (85.54%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFL FLLLA +SPLIDFQ+IFP+TLFP FLIDLK  YI Q GDY+MA+S
Sbjct: 1   MGALLKLVDALLFLVFLLLAFISPLIDFQLIFPQTLFPDFLIDLKASYIHQYGDYLMAES 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           P FVVGLVWLELLFQWPL+LLNLYA LA+K WYNTTCLIYGVS+VASMSAILGEMVGSNR
Sbjct: 61  PPFVVGLVWLELLFQWPLMLLNLYAFLASKPWYNTTCLIYGVSVVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           AS TL+TIYYPFLG GVLAMLRGLV+CSSKAT+TGT+PSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGFGVLAMLRGLVSCSSKATVTGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. ExPASy Swiss-Prot
Match: Q6DFQ5 (Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-06
Identity = 39/154 (25.32%), Postives = 72/154 (46.75%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           M    +L++ + F  F     ++ L+D Q + P +L+P  L+DL  WY     D++MA+ 
Sbjct: 1   MAVCARLLEWIFFFYFFSHIPITLLVDLQAVLPPSLYPQELLDLMKWYTVAFKDHLMANP 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALL-AAKTWYNTTCLIYGVSLVASMSAILGEMVG-- 120
           P +    V+ E + Q P   +  YA       W     ++Y   +  ++ AI+G ++   
Sbjct: 61  PPWFKSFVYCEAILQLPFFPVAAYAFFKGGCKWIRIPAIVYSAHVATTVIAIIGHILFGE 120

Query: 121 ----------SNRASNTLMTIYYPFLGLGVLAML 142
                     + +   TL++IY P+L + VL +L
Sbjct: 121 FPKSDVIAPLTQKDRLTLVSIYAPYLLVPVLLLL 154

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BLAST of Carg19175 vs. ExPASy Swiss-Prot
Match: Q3MHW7 (Sigma intracellular receptor 2 OS=Bos taurus OX=9913 GN=TMEM97 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.2e-04
Identity = 32/107 (29.91%), Postives = 54/107 (50.47%), Query Frame = 0


Query: 13  FLAFLLLA--LVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADSPHFVVGLVWL 72
           FL F  L+   ++ L+D Q + PR L+P  L +L+ WYI +  D ++   P +    ++ 
Sbjct: 13  FLGFYFLSHIPITLLMDLQGVLPRDLYPVELRNLQQWYIEEFKDPLLQTPPAWFKSFLFC 72

Query: 73  ELLFQWPLLLLNLYALL-AAKTWYNTTCLIYGVSLVASMSAILGEMV 117
           EL+FQ P   +  YA       W  T  +IY V  + ++  IL  ++
Sbjct: 73  ELVFQLPFFPIAAYAFFKGGCKWIRTPAIIYSVHTMTTLIPILSTLL 119

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BLAST of Carg19175 vs. ExPASy TrEMBL
Match: A0A6J1GM86 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455258 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.7e-82
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGLVWLELLFQWPLLLLNLYA LAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR
Sbjct: 61  PHFVVGLVWLELLFQWPLLLLNLYAFLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. ExPASy TrEMBL
Match: A0A6J1HVX1 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.8e-80
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLALVSPLIDFQVIFP+TLFPHFLIDLKTWYIRQSGDYIMADS
Sbjct: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPQTLFPHFLIDLKTWYIRQSGDYIMADS 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVV LVWLELLFQWPLLLLNLYA LAAK WYNTTCLIYGVSLVASMSAILGEMVGSNR
Sbjct: 61  PHFVVALVWLELLFQWPLLLLNLYAFLAAKPWYNTTCLIYGVSLVASMSAILGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGT+PSNGRKKRA
Sbjct: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. ExPASy TrEMBL
Match: A0A0A0K5K2 (EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.1e-67
Identity = 135/166 (81.33%), Postives = 151/166 (90.96%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGA LKL+D LLFL FL+LA++SPLIDFQ+IFP TLFP FLIDLKT Y RQ GDY+MA+S
Sbjct: 1   MGAFLKLIDVLLFLIFLILAILSPLIDFQLIFPHTLFPDFLIDLKTSYTRQYGDYLMAES 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           P F+VGLVWLEL FQWP++LLNLYA LA+K WYNTTCLIYGVS+V+SMSA+LGEMVGSNR
Sbjct: 61  PPFLVGLVWLELFFQWPIMLLNLYAFLASKPWYNTTCLIYGVSVVSSMSAVLGEMVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           AS TL+TIYYPFLGLGVLAMLRGLV CSSKA ITGT+PSNGRKKRA
Sbjct: 121 ASTTLLTIYYPFLGLGVLAMLRGLVPCSSKAAITGTRPSNGRKKRA 166

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BLAST of Carg19175 vs. ExPASy TrEMBL
Match: A0A6J1JIQ0 (sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 8.0e-67
Identity = 130/166 (78.31%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVDALLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK+WY+ QSGDY+M ++
Sbjct: 1   MGALLKLVDALLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKSWYVAQSGDYLMVEA 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGL+W ELLFQWPLL LNLYA L++K W+NTTCLIYGVSLV+SMSA +GE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWFNTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTL+TIY+PF+GLGVLAMLRGLV CSSKATI G +PSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLAMLRGLVPCSSKATINGPRPSNGRKKRA 166

[Close]

BLAST of Carg19175 vs. ExPASy TrEMBL
Match: A0A6J1EVW1 (sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111437055 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.7e-65
Identity = 128/166 (77.11%), Postives = 148/166 (89.16%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGALLKLVD LLFLAFLLLA+V PLIDFQ +FP++ +P F+IDLK WY+ QSGDY+MA++
Sbjct: 1   MGALLKLVDVLLFLAFLLLAVVVPLIDFQEVFPKSFYPDFVIDLKRWYVAQSGDYLMAEA 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHFVVGL+W ELLFQWPLL LNLYA L++K WY TTCLIYGVSLV+SMSA +GE+VGSNR
Sbjct: 61  PHFVVGLIWFELLFQWPLLFLNLYAFLSSKAWYKTTCLIYGVSLVSSMSATMGEVVGSNR 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKRA 167
           ASNTL+TIY+PF+GLGVLA LRGLV CSSKA I G +PSNGRKKRA
Sbjct: 121 ASNTLLTIYWPFMGLGVLATLRGLVPCSSKAPINGPRPSNGRKKRA 166

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BLAST of Carg19175 vs. TAIR 10
Match: AT2G32380.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-44
Identity = 89/168 (52.98%), Postives = 128/168 (76.19%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGA  KL+DA+LFL F L+A+++PLID Q   P  +FP F++DL  WYI + GDY++ + 
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHF+VGLVW ELL  WPL ++N+YA+LA K+W+ TT ++YG S+V SM+AILGEM+GS +
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKA-TITGTKPS-NGRKKRA 167
           AS  L+ +Y PF+G+G+LA+LRGL++ S+K+    G +P+   R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Carg19175 vs. TAIR 10
Match: AT1G05210.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 172.9 bits (437), Expect = 2.1e-43
Identity = 89/165 (53.94%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGAL KL+D  LF+ F+ +A+++PLID Q   P  ++P FL DLK+ YI   GDY++ + 
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           PHF+VGLVW ELLF WPL + N+YA+LA K+W+ TTCL+YG SLV SM+AILG+M+GS +
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSKATITGTKPSNGRKKR 166
           AS+ L+ +Y PF+G G+LA+LRGLV  S+K T +  K S    +R
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGSSGKRSTIMPRR 165

[Close]

BLAST of Carg19175 vs. TAIR 10
Match: AT1G05220.1 (Transmembrane protein 97, predicted )

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-36
Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGAL KL++  LF  F L+A+  PL++ Q++FP  ++P  L DLK WY  +  DY+  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           P F VGLVW E++F  PL ++N+YA+L +K+W+ TT L+YG S + SM+AILG+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSK 151
            +N L+  Y PF+GL +LAMLRGLV CS+K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

[Close]

BLAST of Carg19175 vs. TAIR 10
Match: AT1G05220.2 (Transmembrane protein 97, predicted )

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-36
Identity = 75/150 (50.00%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 1   MGALLKLVDALLFLAFLLLALVSPLIDFQVIFPRTLFPHFLIDLKTWYIRQSGDYIMADS 60
           MGAL KL++  LF  F L+A+  PL++ Q++FP  ++P  L DLK WY  +  DY+  + 
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFP-GIYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFVVGLVWLELLFQWPLLLLNLYALLAAKTWYNTTCLIYGVSLVASMSAILGEMVGSNR 120
           P F VGLVW E++F  PL ++N+YA+L +K+W+ TT L+YG S + SM+AILG+M+GS +
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASNTLMTIYYPFLGLGVLAMLRGLVACSSK 151
            +N L+  Y PF+GL +LAMLRGLV CS+K
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLVTCSTK 149

The following BLAST results are available for this feature:

BLAST of Carg19175 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011913.1	2.1e-82	100.00	Transmembrane protein 97, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6572300.1	6.2e-82	99.40	Sigma intracellular receptor 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022952624.1	1.4e-81	98.80	sigma intracellular receptor 2-like [Cucurbita moschata]	[more]
XP_022969277.1	1.0e-79	96.99	sigma intracellular receptor 2-like [Cucurbita maxima]	[more]
XP_038887415.1	9.4e-70	85.54	sigma intracellular receptor 2 [Benincasa hispida]	[more]

BLAST of Carg19175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DFQ5	5.8e-06	25.32	Sigma intracellular receptor 2 OS=Xenopus tropicalis OX=8364 GN=tmem97 PE=2 SV=1	[more]
Q3MHW7	4.2e-04	29.91	Sigma intracellular receptor 2 OS=Bos taurus OX=9913 GN=TMEM97 PE=2 SV=1	[more]

BLAST of Carg19175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GM86	6.7e-82	98.80	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1HVX1	4.8e-80	96.99	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111468330 ...	[more]
A0A0A0K5K2	2.1e-67	81.33	EXPERA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G044230 PE=4...	[more]
A0A6J1JIQ0	8.0e-67	78.31	sigma intracellular receptor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486176 ...	[more]
A0A6J1EVW1	5.7e-65	77.11	sigma intracellular receptor 2-like OS=Cucurbita moschata OX=3662 GN=LOC11143705...	[more]

BLAST of Carg19175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32380.1	1.9e-44	52.98	Transmembrane protein 97, predicted	[more]
AT1G05210.1	2.1e-43	53.94	Transmembrane protein 97, predicted	[more]
AT1G05220.1	4.2e-36	50.00	Transmembrane protein 97, predicted	[more]
AT1G05220.2	4.2e-36	50.00	Transmembrane protein 97, predicted	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05241	EBP	coord: 40..137 e-value: 2.5E-15 score: 56.9
None	No IPR available	PANTHER	PTHR31204	SIGMA INTRACELLULAR RECEPTOR 2	coord: 1..166
None	No IPR available	PANTHER	PTHR31204:SF6	SUBFAMILY NOT NAMED	coord: 1..166
IPR016964	Sigma intracellular receptor 2	PIRSF	PIRSF031032	TMP_97	coord: 1..158 e-value: 6.0E-31 score: 105.3
IPR033118	EXPERA domain	PROSITE	PS51751	EXPERA	coord: 8..140 score: 16.237085

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19175-RA	Carg19175-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane