Carg19163 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCGGGGGTTGACGGTTGGCGAAGCAACCGACGTCATTTAGTCTCACTTTTACCTTTACTCGCCGCTCCCCATTTCTCCCGCGTCTGCTCTGCGTTTTGACTACGCACTGAGGGATCCTCTTGTATCGTGTAAGGCGTTGAGAGATGTTATTATCGAATTTACGGTCCTCCATTTCTCTGGTGCCGCTTCTCAAGACCACGGCAATCTTCTCTACTGCTCACAAGCTAGGCTTCTCACTTTCTCGCTTCTCAGTCCGCTCCATGGCTGCTTCTGCTTCTTCCCCTTTCAAGAAAATCCAAATTGAGAGGGATGGCACTGTGAGTTCACTTCCGTTTTGCTCTTTAATGTTTCCCCTCGCTTTGATTTTCCTCTATTCTCTGTTTCTTTATCTGGGTATGATTCTATTTGCTGCTTGCCGTTTGGGAAAGATTGATGGTGTCGTTTGTGGGGGAATTCGCCTACTTTGTTTAATGGGTCGGTGGGATTCTTGTGGCAGTGTTTAATTTAGGGGAAATGGAGTTAACCCTGTGGCCTGATTTGTTGTAACCCTAGATGATTAAGGGGTTTGCTATTTGAAACGATTAGTGGATTGAGTAGCTATGGTTAGTGTTGTAATGCAATTAGAGCTAGATTCCTTAATGACCTGTGTTGTCCACTTAAGCTTTGTTAAATCACTACTCAACCCAAAAATGGTCGAAAGCAATACTTTAACACTCCACCGTTAGTAGATATGCCGGCCCCCAAGGGGTAGATTGTGAGATCCCACATTGGTTGGAGAGGGGAAGGAAGAAGCATTCCTTGTAAGAGTGCGATGTGCAAGCAAGGGCCTTAGGCCCCAAAGGGTATAAGGGGTGTAGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACATTGAGAGGAAACTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCTATGATACAATGTTGAATCACTTTTGAGCCAAAAAGCTTAAGATGGTGAGTTAAGATTAATTATATCAATACTTTAACAAGCTTGCACTTAGCTTTACTGGAGCATTGAGATGCTCAGTTCGATGGTATTTCAACTACTTGAAATTTGAATTCATGGAATTTTCACTGAACATTCCAAGTTTTGTTTCTTTTGGCAGGAATTTGATGCTTATGTTGTGGGGAGAGATGATGCCCCAGGAATTGTTGTTCTTCAAGAATGGTGGGGAGTGGATTATGAAGTCAAGAATCATGCTGTGAAGATATCTGAGCTTGGGTCTGGTTTCAAGGCACTTATTCCCGAGTACGATGCCTTTTCTCTCTTGGAATATGAATTCTTTCTTCTGTTATGATGATGTCAATGATATAATTAGTCTCCTTGGTTGTGCTGCATTCTGCTGATAACAGTTTGTATCGAGGTAAGGTTGGGTTAGATGTTGCTGAAGCGCAACATCTGATGGAAGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTCAAGGGTAATGGCTCTAAGAAGGTACTCAACTGTTTAGGATACTGATGAACTGTAGGCTAAAATCTCCATTTTGAGATCATAATATCTCTAGAAAGTTAAAAACATATTAGGATCATGTCAGGTTGGTGTAACTGGATACTGCATGGGGGGTGCTCTTTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCATCAGAGCTTGCAGATCCTACCCAGGCTAAGGCACCCATTCAGGCTCATTTTGGCGAGCTCGATTCTTTTGTTGGCTTCTCCGACTTGACGGTAGAACTTTTCTCTCGATTCTTTCTGTCAAATATTCCCTTTTCTTTCTTCCATGTAGTCACTCAATCATATGTGAAATGCAAAATGCCTTTGATGGTAGTTATTGAATGTGGAATTGAGAAGGATCTGTTTAATAGGTCGTTGCTAGCAGATATTGTTCTTTTCGGACTTCCTCGCAAGGTTTTTAAAACACGTTTTTCTAGGGAGAGGTTTCTACACTCCTATAAGGAAGGCTTCGTTCCCCGTTCCCCATTCCCCTCTCCAAGCAAAAGACAATATTTGCTAGTGATGGGCTTAGACTAACTGTTTTTAATTGTTAGAGTCTTGTTACACAATCTTGCTGTTAAAATTTGCGTTGGATTTTGTTTTTGGTTAAAATACGCCAACAAGAACGCAGACGTTGTACATGCTAGAGTCATAATGAGATTAGAGTTTTCAGGCTGCCAAGAAACTGGAGGAAAAGCTGAAAGAATCAGGAATTCCATACGAGGTGCATATATATAAAGGAAGTGGGCATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAGCATGGGAATGGAGGACGAGGACGATAGCGCGGTGGAACTGGCATGGTCTCGCTTCCAATCCTGGATGTCAAGGTACCTCTCAGCTTGAACAGGTTCTGTTCATTCATCCTAATTAGCTTCCTAGTTTATAGGCCATCACAGAACTTTGTTTAAATTCATGGGCAGTGTTTTGTTAAGGAGAAATGTAACTCTTGGTTTCTCAAGGTTGCTCTTGCTTGAATAATACGGTCTCTGTTTTGTGTCTCTATTTCAAAGTAATGTTTCCTTCCTTGGTCTTCTGTCATTTAATATTGTCATCTCACTACACATGATCTTTCATAAGTCAACCAAGTATCAATTTCAATTCAAAGAATATTTACATTTTTATTTTTAAAATTTAAAATTAAAAGTGTTCATACTCAGCTTCAATAAAATAATGTCTACGTGGGGAAACGTTCAAATTTTTAGTTGACTT TTCGGGGGTTGACGGTTGGCGAAGCAACCGACGTCATTTAGTCTCACTTTTACCTTTACTCGCCGCTCCCCATTTCTCCCGCGTCTGCTCTGCGTTTTGACTACGCACTGAGGGATCCTCTTGTATCGTGTAAGGCGTTGAGAGATGTTATTATCGAATTTACGGTCCTCCATTTCTCTGGTGCCGCTTCTCAAGACCACGGCAATCTTCTCTACTGCTCACAAGCTAGGCTTCTCACTTTCTCGCTTCTCAGTCCGCTCCATGGCTGCTTCTGCTTCTTCCCCTTTCAAGAAAATCCAAATTGAGAGGGATGGCACTGAATTTGATGCTTATGTTGTGGGGAGAGATGATGCCCCAGGAATTGTTGTTCTTCAAGAATGGTGGGGAGTGGATTATGAAGTCAAGAATCATGCTGTGAAGATATCTGAGCTTGGGTCTGGTTTCAAGGCACTTATTCCCGATTTGTATCGAGGTAAGGTTGGGTTAGATGTTGCTGAAGCGCAACATCTGATGGAAGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTCAAGGGTAATGGCTCTAAGAAGGTTGGTGTAACTGGATACTGCATGGGGGGTGCTCTTTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCATCAGAGCTTGCAGATCCTACCCAGGCTAAGGCACCCATTCAGGCTCATTTTGGCGAGCTCGATTCTTTTGTTGGCTTCTCCGACTTGACGGCTGCCAAGAAACTGGAGGAAAAGCTGAAAGAATCAGGAATTCCATACGAGGTGCATATATATAAAGGAAGTGGGCATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAGCATGGGAATGGAGGACGAGGACGATAGCGCGGTGGAACTGGCATGGTCTCGCTTCCAATCCTGGATGTCAAGGTACCTCTCAGCTTGAACAGGTTCTGTTCATTCATCCTAATTAGCTTCCTAGTTTATAGGCCATCACAGAACTTTGTTTAAATTCATGGGCAGTGTTTTGTTAAGGAGAAATGTAACTCTTGGTTTCTCAAGGTTGCTCTTGCTTGAATAATACGGTCTCTGTTTTGTGTCTCTATTTCAAAGTAATGTTTCCTTCCTTGGTCTTCTGTCATTTAATATTGTCATCTCACTACACATGATCTTTCATAAGTCAACCAAGTATCAATTTCAATTCAAAGAATATTTACATTTTTATTTTTAAAATTTAAAATTAAAAGTGTTCATACTCAGCTTCAATAAAATAATGTCTACGTGGGGAAACGTTCAAATTTTTAGTTGACTT ATGTTATTATCGAATTTACGGTCCTCCATTTCTCTGGTGCCGCTTCTCAAGACCACGGCAATCTTCTCTACTGCTCACAAGCTAGGCTTCTCACTTTCTCGCTTCTCAGTCCGCTCCATGGCTGCTTCTGCTTCTTCCCCTTTCAAGAAAATCCAAATTGAGAGGGATGGCACTGAATTTGATGCTTATGTTGTGGGGAGAGATGATGCCCCAGGAATTGTTGTTCTTCAAGAATGGTGGGGAGTGGATTATGAAGTCAAGAATCATGCTGTGAAGATATCTGAGCTTGGGTCTGGTTTCAAGGCACTTATTCCCGATTTGTATCGAGGTAAGGTTGGGTTAGATGTTGCTGAAGCGCAACATCTGATGGAAGGTCTCGACTGGCAAGGTGCTGTGAAGGATATACATGCTTCAGTTAACTGGCTCAAGGGTAATGGCTCTAAGAAGGTTGGTGTAACTGGATACTGCATGGGGGGTGCTCTTTCAATTGCAAGTTCTGTTTTGATCCCTGAGGTTGATGCTGTTGTTTCATTCTATGGAGTTCCTTCATCAGAGCTTGCAGATCCTACCCAGGCTAAGGCACCCATTCAGGCTCATTTTGGCGAGCTCGATTCTTTTGTTGGCTTCTCCGACTTGACGGCTGCCAAGAAACTGGAGGAAAAGCTGAAAGAATCAGGAATTCCATACGAGGTGCATATATATAAAGGAAGTGGGCATGCTTTCATGAACCGATCCGAAGAAGGTGTGAAGAGGAGGAAGAGCATGGGAATGGAGGACGAGGACGATAGCGCGGTGGAACTGGCATGGTCTCGCTTCCAATCCTGGATGTCAAGGTACCTCTCAGCTTGA MLLSNLRSSISLVPLLKTTAIFSTAHKLGFSLSRFSVRSMAASASSPFKKIQIERDGTEFDAYVVGRDDAPGIVVLQEWWGVDYEVKNHAVKISELGSGFKALIPDLYRGKVGLDVAEAQHLMEGLDWQGAVKDIHASVNWLKGNGSKKVGVTGYCMGGALSIASSVLIPEVDAVVSFYGVPSSELADPTQAKAPIQAHFGELDSFVGFSDLTAAKKLEEKLKESGIPYEVHIYKGSGHAFMNRSEEGVKRRKSMGMEDEDDSAVELAWSRFQSWMSRYLSA Homology
BLAST of Carg19163 vs. NCBI nr
Match: KAG7011902.1 (Protein usf [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 555.4 bits (1430), Expect = 2.7e-154 Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
BLAST of Carg19163 vs. NCBI nr
Match: XP_022952350.1 (uncharacterized protein LOC111455058 [Cucurbita moschata]) HSP 1 Score: 553.5 bits (1425), Expect = 1.0e-153 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Carg19163 vs. NCBI nr
Match: KAG6572286.1 (WRKY transcription factor 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 548.1 bits (1411), Expect = 4.4e-152 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of Carg19163 vs. NCBI nr
Match: XP_022969206.1 (uncharacterized protein LOC111468273 [Cucurbita maxima]) HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151 Identity = 278/282 (98.58%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Carg19163 vs. NCBI nr
Match: XP_023554564.1 (uncharacterized protein LOC111811770 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 542.3 bits (1396), Expect = 2.4e-150 Identity = 278/284 (97.89%), Postives = 280/284 (98.59%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy Swiss-Prot
Match: P46209 (Protein usf OS=Aquifex pyrophilus OX=2714 GN=usf PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.7e-21 Identity = 75/246 (30.49%), Postives = 117/246 (47.56%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy Swiss-Prot
Match: O67802 (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1997 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.9e-18 Identity = 63/209 (30.14%), Postives = 103/209 (49.28%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy Swiss-Prot
Match: P0A115 (Carboxymethylenebutenolidase OS=Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13) OX=1301098 GN=clcD PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.8e-11 Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy Swiss-Prot
Match: P0A114 (Carboxymethylenebutenolidase OS=Pseudomonas putida OX=303 GN=clcD PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.8e-11 Identity = 60/207 (28.99%), Postives = 96/207 (46.38%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy Swiss-Prot
Match: P71505 (Putative carboxymethylenebutenolidase OS=Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) OX=272630 GN=MexAM1_META1p1735 PE=3 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 5.1e-10 Identity = 78/301 (25.91%), Postives = 134/301 (44.52%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy TrEMBL
Match: A0A6J1GLI6 (uncharacterized protein LOC111455058 OS=Cucurbita moschata OX=3662 GN=LOC111455058 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.0e-154 Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy TrEMBL
Match: A0A6J1HX41 (uncharacterized protein LOC111468273 OS=Cucurbita maxima OX=3661 GN=LOC111468273 PE=4 SV=1) HSP 1 Score: 546.6 bits (1407), Expect = 6.1e-152 Identity = 278/282 (98.58%), Postives = 279/282 (98.94%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy TrEMBL
Match: A0A0A0K247 (DLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G043010 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 5.1e-138 Identity = 255/282 (90.43%), Postives = 266/282 (94.33%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy TrEMBL
Match: A0A5A7T9V7 (Protein usf OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004370 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0
BLAST of Carg19163 vs. ExPASy TrEMBL
Match: A0A1S3C0H7 (protein usf OS=Cucumis melo OX=3656 GN=LOC103495610 PE=4 SV=1) HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136 Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0
BLAST of Carg19163 vs. TAIR 10
Match: AT2G32520.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 406.0 bits (1042), Expect = 2.5e-113 Identity = 192/238 (80.67%), Postives = 215/238 (90.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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